BLASTX nr result
ID: Ephedra27_contig00015483
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00015483
(1226 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006849319.1| hypothetical protein AMTR_s00164p00020970 [A... 145 3e-32
gb|ESW27283.1| hypothetical protein PHAVU_003G188300g [Phaseolus... 139 2e-30
ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 134 6e-29
emb|CBI28530.3| unnamed protein product [Vitis vinifera] 134 6e-29
ref|XP_002514722.1| pentatricopeptide repeat-containing protein,... 132 3e-28
ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containi... 130 8e-28
ref|XP_006440653.1| hypothetical protein CICLE_v10023621mg [Citr... 130 1e-27
ref|XP_006494986.1| PREDICTED: pentatricopeptide repeat-containi... 130 1e-27
gb|EOY21933.1| Pentatricopeptide repeat superfamily protein [The... 127 7e-27
ref|XP_002318601.2| hypothetical protein POPTR_0012s07030g, part... 125 5e-26
ref|NP_001159257.1| hypothetical protein [Zea mays] gi|223943049... 123 1e-25
ref|XP_003622167.1| Pentatricopeptide repeat protein [Medicago t... 123 2e-25
ref|XP_004508741.1| PREDICTED: pentatricopeptide repeat-containi... 122 3e-25
gb|EXB38552.1| hypothetical protein L484_008580 [Morus notabilis] 120 9e-25
gb|EMT32379.1| Pentatricopeptide repeat-containing protein [Aegi... 120 1e-24
ref|XP_006280363.1| hypothetical protein CARUB_v10026291mg [Caps... 118 4e-24
ref|XP_006394515.1| hypothetical protein EUTSA_v10004085mg [Eutr... 117 7e-24
ref|XP_002302931.1| predicted protein [Populus trichocarpa] 117 1e-23
gb|EOY22114.1| Pentatricopeptide repeat-containing protein, puta... 115 3e-23
ref|NP_200945.1| pentatricopeptide repeat-containing protein [Ar... 115 3e-23
>ref|XP_006849319.1| hypothetical protein AMTR_s00164p00020970 [Amborella trichopoda]
gi|548852840|gb|ERN10900.1| hypothetical protein
AMTR_s00164p00020970 [Amborella trichopoda]
Length = 459
Score = 145 bits (366), Expect = 3e-32
Identities = 108/373 (28%), Positives = 183/373 (49%), Gaps = 9/373 (2%)
Frame = +3
Query: 6 ACAEEAVSRRLLRFTNWAIALPNCKDDPQLFNTALSVFIRKQDSKAMDTVLLAIKSNMLL 185
+C A +RRLLRF W+ P CK LFN A+ +F +D +AM+ ++ +K
Sbjct: 63 SCTHRAQTRRLLRFFTWSAKQPTCKLPDTLFNHAIKLFASLKDLRAMELLVTELKRESRG 122
Query: 186 LSMSSFAAAIDTLLKAEKISQAIGVFRRYNRAR--ESPEVVSIFIVSLCNHGYPDVAEHI 359
+ + ++AA T++ K QAIG+F+ + R + +++ + +LC G+ AE +
Sbjct: 123 MGIDTWAAIATTMVDHGKEDQAIGIFKNIEKYRCPRDEKSLNLLVHALCARGHARKAEGV 182
Query: 360 L-DPKMFSSYYEYSSTPPAKEIFYNHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYN 536
+ + K + S Y + L+ GW IKG + A++ + ++ G P+L AY+
Sbjct: 183 VWNAKNWVSMDSY---------IFTTLIHGWCIKGEFKDARRVFEEMRSNGFSPNLVAYH 233
Query: 537 AYLDCLCKAAN---NPGAMFDTGFDIISEMNNVGV-PLHISIFKTLITHLCNGERPDLAM 704
+ + C+C A N NP A+ F+++ EM + V P IS F LI++L R A
Sbjct: 234 SLIRCVC-AKNLRINPSALVRDFFELVMEMRSNSVCPTTIS-FNILISYLGRARRVKEAD 291
Query: 705 LVFDEMPKYKCHADYDVYXXXXXXXXXXXXWREDGDYLLETLFKARVEFDVEKSVGLVRQ 884
VF M + C DY Y + G+ +++ + + ++ L
Sbjct: 292 QVFRAMVQEGCDPDYVSYFLVVRLLYLTGRMGK-GNEMVDEMIQIGLKPKARFYHSLTGV 350
Query: 885 LIDVERYDAAIHMLNMIGND--EKKGLVYDAIIEGLATYGRFDQARYVWNEAQQNGVFLE 1058
L VE+ D A+ +L + + E G YD +I L G+F+ R +W+EA + G L+
Sbjct: 351 LCGVEKVDHALWLLARMKENCSEVYGPTYDLLITKLCKGGKFEIGRKLWDEALERGAVLQ 410
Query: 1059 VCSDILDPAKTEV 1097
D+LDP+KTEV
Sbjct: 411 CSVDLLDPSKTEV 423
>gb|ESW27283.1| hypothetical protein PHAVU_003G188300g [Phaseolus vulgaris]
Length = 494
Score = 139 bits (350), Expect = 2e-30
Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 9/391 (2%)
Frame = +3
Query: 18 EAVSRRLLRFTNWAIALPNCKDDPQLFNTALSVFIRKQDSKAMDTVLLAIKSNMLLLSMS 197
EA +RRLLRF W+ + + + +N AL VF K D AMD ++ +K ++
Sbjct: 89 EAHTRRLLRFFLWSSKNLSHSLENKDYNHALRVFAEKNDYTAMDILMEDLKKEGRVMDAE 148
Query: 198 SFAAAIDTLLKAEKISQAIGVFRRYNRARESPE--VVSIFIVSLCNHGYPDVAEHILDPK 371
+F DTL+K K QA+GVF+ ++ + S + V+ I +LC+ G+ AE ++
Sbjct: 149 TFGLVADTLVKLGKEDQALGVFKNLDKYKCSIDEFTVTAIINALCSKGHAKRAEGVV--- 205
Query: 372 MFSSYYEYSSTPPAKEIFYNHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLDC 551
++ AK Y L+ GWS++ + A++ ++ +K G P L YN +L C
Sbjct: 206 ----WHHRDKITGAKPCIYRSLLYGWSVQRNVKEARRIIKEMKANGVTPDLLCYNTFLRC 261
Query: 552 LCKA--ANNPGAMFDTGFDIISEMNNVGV-PLHISIFKTLITHLCNGERPDLAMLVFDEM 722
LC+ +NP + +++ EM + V P IS + L++ L R + + + M
Sbjct: 262 LCERNLRHNPSGLVPEALNVMMEMRSCRVFPTPIS-YNILLSCLGKTRRVKESCQILETM 320
Query: 723 PKYKCHADYDVYXXXXXXXXXXXXWREDGDYLLETLFKARVEFDVEKSVGLVRQLIDVER 902
C D+ Y + + D + + + K + + + L+ L VER
Sbjct: 321 TNGGCDPDWVSYYLVAKVLFLSGRFGKGKDIVDQMIGKGLMP-NHKFYYSLIGILCGVER 379
Query: 903 YDAAIHMLNMIGNDEKKGL--VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDIL 1076
+ A+ + + + G VYD +I L T G F++ R +W+EA G+ L+ D+L
Sbjct: 380 VNHALELFEKMKKNSMGGYGPVYDVLIPKLCTGGNFEKGRELWDEATSMGIILQCSEDVL 439
Query: 1077 DPAKTEVRDREHPWFPCL--TLVASKPRRIK 1163
DP+ T+V P L + VA P ++K
Sbjct: 440 DPSITQVYKPTKPEKISLVDSSVAKSPHKVK 470
>ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61370, mitochondrial-like [Vitis vinifera]
Length = 505
Score = 134 bits (338), Expect = 6e-29
Identities = 100/370 (27%), Positives = 175/370 (47%), Gaps = 7/370 (1%)
Frame = +3
Query: 9 CAEEAVSRRLLRFTNWAIALPNCKDDPQLFNTALSVFIRKQDSKAMDTVLLAIKSNMLLL 188
C EA +RRLLRF W+ NCK + FN A+ VF K+D KA+D ++ + + +
Sbjct: 80 CKNEAPTRRLLRFFLWSSKKFNCKLEDDDFNYAIQVFAEKKDLKAIDILVSDLSNEGREM 139
Query: 189 SMSSFAAAIDTLLKAEKISQAIGVFRRYNRARESPEVVSI--FIVSLCNHGYPDVAEHIL 362
+F +TL+ + A+G+F+ ++ + S + V++ + +LC+ G+ AE ++
Sbjct: 140 KAQTFGIVAETLVSLGREDDALGLFKNLDKFKCSYDSVTVTAIVNALCSKGHARRAEGVV 199
Query: 363 DPKMFSSYYEYSSTPPAKEIFYNHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAY 542
+ K Y L GWS + + A++ L+ +K G P L YN +
Sbjct: 200 -------RHHKDKILGVKPCIYRSLFYGWSEQKNVKEARRILKEMKSVGIMPDLFCYNTF 252
Query: 543 LDCLCK--AANNPGAMFDTGFDIISEM-NNVGVPLHISIFKTLITHLCNGERPDLAMLVF 713
L CLC+ +NP + +++ EM +N P IS + L++ L R + +
Sbjct: 253 LRCLCERNLKSNPSGLVPEALNVMMEMRSNRITPTSIS-YNILLSCLGRTRRVKESCRIL 311
Query: 714 DEMPKYKCHADYDVYXXXXXXXXXXXXWREDGDYLLETLFKARVEFDVEKSVGLVRQLID 893
D M + C D+ Y + + G+ +++ + + + D + L+ L
Sbjct: 312 DLMKRLGCSPDWVSYYLVARVLYLTGRFGK-GNQIVDEMIEEGLVPDRKFYYDLIGVLCG 370
Query: 894 VERYDAAIHMLNMIGNDEKKGL--VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCS 1067
VER + A+ M + G VYD +I L G F + R +W+EA + GV L S
Sbjct: 371 VERVNYALEMFERMKRSSLGGYGPVYDVLIPKLCRSGDFGKGRELWDEATRVGVLLHCSS 430
Query: 1068 DILDPAKTEV 1097
++LDP+ T+V
Sbjct: 431 EVLDPSITKV 440
>emb|CBI28530.3| unnamed protein product [Vitis vinifera]
Length = 452
Score = 134 bits (338), Expect = 6e-29
Identities = 100/370 (27%), Positives = 175/370 (47%), Gaps = 7/370 (1%)
Frame = +3
Query: 9 CAEEAVSRRLLRFTNWAIALPNCKDDPQLFNTALSVFIRKQDSKAMDTVLLAIKSNMLLL 188
C EA +RRLLRF W+ NCK + FN A+ VF K+D KA+D ++ + + +
Sbjct: 49 CKNEAPTRRLLRFFLWSSKKFNCKLEDDDFNYAIQVFAEKKDLKAIDILVSDLSNEGREM 108
Query: 189 SMSSFAAAIDTLLKAEKISQAIGVFRRYNRARESPEVVSI--FIVSLCNHGYPDVAEHIL 362
+F +TL+ + A+G+F+ ++ + S + V++ + +LC+ G+ AE ++
Sbjct: 109 KAQTFGIVAETLVSLGREDDALGLFKNLDKFKCSYDSVTVTAIVNALCSKGHARRAEGVV 168
Query: 363 DPKMFSSYYEYSSTPPAKEIFYNHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAY 542
+ K Y L GWS + + A++ L+ +K G P L YN +
Sbjct: 169 -------RHHKDKILGVKPCIYRSLFYGWSEQKNVKEARRILKEMKSVGIMPDLFCYNTF 221
Query: 543 LDCLCK--AANNPGAMFDTGFDIISEM-NNVGVPLHISIFKTLITHLCNGERPDLAMLVF 713
L CLC+ +NP + +++ EM +N P IS + L++ L R + +
Sbjct: 222 LRCLCERNLKSNPSGLVPEALNVMMEMRSNRITPTSIS-YNILLSCLGRTRRVKESCRIL 280
Query: 714 DEMPKYKCHADYDVYXXXXXXXXXXXXWREDGDYLLETLFKARVEFDVEKSVGLVRQLID 893
D M + C D+ Y + + G+ +++ + + + D + L+ L
Sbjct: 281 DLMKRLGCSPDWVSYYLVARVLYLTGRFGK-GNQIVDEMIEEGLVPDRKFYYDLIGVLCG 339
Query: 894 VERYDAAIHMLNMIGNDEKKGL--VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCS 1067
VER + A+ M + G VYD +I L G F + R +W+EA + GV L S
Sbjct: 340 VERVNYALEMFERMKRSSLGGYGPVYDVLIPKLCRSGDFGKGRELWDEATRVGVLLHCSS 399
Query: 1068 DILDPAKTEV 1097
++LDP+ T+V
Sbjct: 400 EVLDPSITKV 409
>ref|XP_002514722.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546326|gb|EEF47828.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 479
Score = 132 bits (332), Expect = 3e-28
Identities = 89/369 (24%), Positives = 174/369 (47%), Gaps = 6/369 (1%)
Frame = +3
Query: 9 CAEEAVSRRLLRFTNWAIALPNCKDDPQLFNTALSVFIRKQDSKAMDTVLLAIKSNMLLL 188
C EA +RRLLRF W+ + + FN A+ V K+D AM ++ ++ ++
Sbjct: 65 CKHEAPTRRLLRFFLWSYKRLDFSMKDEDFNHAIRVLAEKKDHTAMQILISDLRKEGRVM 124
Query: 189 SMSSFAAAIDTLLKAEKISQAIGVFRRYNRAR--ESPEVVSIFIVSLCNHGYPDVAEHIL 362
+F + L+K + +A+G+F+ ++ + + E V+ I +LC G+ A ++
Sbjct: 125 EPQTFGLVAEALVKLGREDEALGIFKNLDKFKCPQDCETVTAIITALCAEGHAKKAYGVV 184
Query: 363 DPKMFSSYYEYSSTPPAKEIFYNHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAY 542
+++ + + Y L+ GWS++ + A++ +Q +K G KP L YN +
Sbjct: 185 ------LHHKDKLSEVIRPCIYRSLIYGWSMQKNVKRAREVIQEMKRNGIKPDLFCYNTF 238
Query: 543 LDCLCK--AANNPGAMFDTGFDIISEMNNVGVPLHISIFKTLITHLCNGERPDLAMLVFD 716
L CLC+ NP + +++ EM + + + + L++ L R + + +
Sbjct: 239 LRCLCERNVERNPSGLVPESLNVMMEMRSYRIEPNSISYNILLSCLGRVRRVQESCKILE 298
Query: 717 EMPKYKCHADYDVYXXXXXXXXXXXXWREDGDYLLETLFKARVEFDVEKSVGLVRQLIDV 896
M K C D+ Y + + G+ +++ + + R+ D + L+ L V
Sbjct: 299 LMKKSSCAPDWVSYYLVAKVLYLTGRFGK-GNKIVDEMIERRLVPDRKFYYDLIGILCGV 357
Query: 897 ERYDAAIHMLNMIGNDEKKGL--VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSD 1070
ER + A+ + + + G VYD +I L G F++ + +W+EA GV + S+
Sbjct: 358 ERVNFALKLFDQMKRSSSGGYGPVYDLLIPKLCIGGNFEKGKELWDEAMAMGVTVHCSSE 417
Query: 1071 ILDPAKTEV 1097
+LDP+ T+V
Sbjct: 418 VLDPSITKV 426
>ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
mitochondrial-like [Cucumis sativus]
gi|449477571|ref|XP_004155060.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g61370,
mitochondrial-like [Cucumis sativus]
Length = 487
Score = 130 bits (328), Expect = 8e-28
Identities = 95/367 (25%), Positives = 168/367 (45%), Gaps = 7/367 (1%)
Frame = +3
Query: 18 EAVSRRLLRFTNWAIALPNCKDDPQLFNTALSVFIRKQDSKAMDTVLLAIKSNMLLLSMS 197
EA +RRLLRF W++ N + + FN A+ F +K+D A++ +L +K +
Sbjct: 93 EAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQKKDYTAVNILLSNLKKADRAMDGQ 152
Query: 198 SFAAAIDTLLKAEKISQAIGVFR---RYNRARESPEVVSIFIVSLCNHGYPDVAEHILDP 368
+F + +K ++ +A+G+F+ +Y + VV+I I +LC+ G+ AE ++
Sbjct: 153 TFGFVAEAFVKMDREDEALGLFKNLEKYKCPHDQFTVVAI-ITALCSKGHAKRAEGVV-- 209
Query: 369 KMFSSYYEYSSTPPAKEIFYNHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLD 548
+ Y L+ GWSIK + A++ L+ +K G P L YN +L
Sbjct: 210 -----LHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILKEMKSDGTMPDLFCYNTFLK 264
Query: 549 CLCK--AANNPGAMFDTGFDIISEMNNVGVPLHISIFKTLITHLCNGERPDLAMLVFDEM 722
CLC+ NP + +++ EM + + + + L++ LC R + + + M
Sbjct: 265 CLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSISYNILLSCLCKTRRVKESCKILEMM 324
Query: 723 PKYKCHADYDVYXXXXXXXXXXXXWREDGDYLLETLFKARVEFDVEKSVGLVRQLIDVER 902
+ C D Y + + G +++ + + + D + L+ L VER
Sbjct: 325 KRTGCQPDCVSYYLMARVLFLTGRFGK-GREIVDEMIEEGLTPDRKFYYDLIGILCGVER 383
Query: 903 YDAAIHMLNMIGNDEKKGL--VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDIL 1076
+ A+ + + G VYD +I L G F+ R +W EA GV L S+IL
Sbjct: 384 TNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLWEEAMAMGVSLNCSSEIL 443
Query: 1077 DPAKTEV 1097
DP+ T+V
Sbjct: 444 DPSITKV 450
>ref|XP_006440653.1| hypothetical protein CICLE_v10023621mg [Citrus clementina]
gi|557542915|gb|ESR53893.1| hypothetical protein
CICLE_v10023621mg [Citrus clementina]
Length = 488
Score = 130 bits (327), Expect = 1e-27
Identities = 98/383 (25%), Positives = 179/383 (46%), Gaps = 8/383 (2%)
Frame = +3
Query: 6 ACAEEAVSRRLLRFTNWAIALPNCKDDPQLFNTALSVFIRKQDSKAMDTVLLAIKSNMLL 185
+C EA +RRLLRF W+ + + + +N A+ VF K+D AM+ ++ ++ +
Sbjct: 81 SCKHEAPTRRLLRFFLWSCKNLSASLEDKDYNHAIRVFAEKKDHMAMNILVSDLRKEGRV 140
Query: 186 LSMSSFAAAIDTLLKAEKISQAIGVFRRYNRAR--ESPEVVSIFIVSLCNHGYPDVAEHI 359
+ SF ++TL+K + +A+G+F+ + + + VS + +LC G+ AE +
Sbjct: 141 METQSFGVLVETLVKLGREDEALGIFKNLEKFKCVQDSVTVSAIVSALCAKGHARRAEGV 200
Query: 360 LDPKMFSSYYEYSSTPPAKEIFYNHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNA 539
+ Y+ + Y L+ GWS++ + A+K ++ +K G P L YN
Sbjct: 201 V-------YHHKDKISGVELCIYRSLIYGWSMQENVKAARKIIKEMKSAGFMPDLFCYNT 253
Query: 540 YLDCLCK--AANNPGAMFDTGFDIISEMNNVGV-PLHISIFKTLITHLCNGERPDLAMLV 710
+L LC+ NP + +++ EM + + P IS + L++ L R + V
Sbjct: 254 FLRGLCERNLKRNPSGLVPEALNVMMEMRSYRIAPTSIS-YNILLSCLGRTRRVKESCRV 312
Query: 711 FDEMPKYKCHADYDVYXXXXXXXXXXXXWREDGDYLLETLFKARVEFDVEKSVGLVRQLI 890
++M K C D+ Y + + G+ +++ + + + D + L+ L
Sbjct: 313 LEQMKKSGCAPDWVSYYLVARVLYLSGRFGK-GNKIVDEMIEEGLIPDRKFYYDLIGILC 371
Query: 891 DVERYDAAIHMLNMIGNDEKKGL--VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVC 1064
VER + A+ + + G VYD +I + G F + R +W+EA G+ L
Sbjct: 372 GVERVNFALELFERMKRSSLGGYGPVYDVLIPKVCQGGDFVKGRELWDEAMVMGLTLSCS 431
Query: 1065 SDILDPAKTEV-RDREHPWFPCL 1130
S++LDP+ TEV R P CL
Sbjct: 432 SNVLDPSITEVFHPRRKPTEGCL 454
>ref|XP_006494986.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
mitochondrial-like [Citrus sinensis]
Length = 495
Score = 130 bits (326), Expect = 1e-27
Identities = 97/383 (25%), Positives = 180/383 (46%), Gaps = 8/383 (2%)
Frame = +3
Query: 6 ACAEEAVSRRLLRFTNWAIALPNCKDDPQLFNTALSVFIRKQDSKAMDTVLLAIKSNMLL 185
+C +EA +RRLLRF W+ + + + +N A+ VF K+D AM+ ++ ++ +
Sbjct: 86 SCKQEAPTRRLLRFFLWSCKNMSASLEDKDYNHAIRVFAEKRDHTAMNILVSDLRKEGRV 145
Query: 186 LSMSSFAAAIDTLLKAEKISQAIGVFRRYNRAR--ESPEVVSIFIVSLCNHGYPDVAEHI 359
+ SF ++TL+K + +A+G+F+ + + + VS + +LC G+ AE +
Sbjct: 146 MESQSFGVLVETLVKLGREDEALGIFKNLEKFKCVQDSVTVSAIVSALCAKGHARRAEGV 205
Query: 360 LDPKMFSSYYEYSSTPPAKEIFYNHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNA 539
+ Y+ + Y L+ GWS++ + A+K ++ +K G P L YN
Sbjct: 206 V-------YHHKDKISGVELCIYRSLIYGWSMQENVKAARKIIKEMKSAGIMPDLFCYNT 258
Query: 540 YLDCLCK--AANNPGAMFDTGFDIISEMNNVGV-PLHISIFKTLITHLCNGERPDLAMLV 710
+L LC+ NP + +++ EM + + P IS + L++ L R + V
Sbjct: 259 FLRGLCERNLKRNPSGLVPEALNVMMEMRSYRIAPTSIS-YNILLSCLGRTRRVKESCQV 317
Query: 711 FDEMPKYKCHADYDVYXXXXXXXXXXXXWREDGDYLLETLFKARVEFDVEKSVGLVRQLI 890
++M K C D+ Y + + G+ +++ + + + D + L+ L
Sbjct: 318 LEQMKKSGCAPDWVSYYLVARVLYLSGRFGK-GNKIVDEMIEEGLIPDRKFYYDLIGILC 376
Query: 891 DVERYDAAIHMLNMIGNDEKKGL--VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVC 1064
VER + A+ + + G VYD +I + G F + R +W+EA G+ L
Sbjct: 377 GVERVNFALELFERMKRSSLGGYGPVYDVLIPKVCRGGDFVKGRELWDEAMVMGLTLSCS 436
Query: 1065 SDILDPAKTEV-RDREHPWFPCL 1130
S++LDP+ EV + R P CL
Sbjct: 437 SNVLDPSIIEVFQPRRKPTESCL 459
>gb|EOY21933.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 487
Score = 127 bits (320), Expect = 7e-27
Identities = 92/371 (24%), Positives = 175/371 (47%), Gaps = 7/371 (1%)
Frame = +3
Query: 6 ACAEEAVSRRLLRFTNWAIALPNCKDDPQLFNTALSVFIRKQDSKAMDTVLLAIKSNMLL 185
+C EA +RRLLRF W++ + + + N + VF +K+D AM ++ I++
Sbjct: 79 SCENEAPTRRLLRFFLWSVKNLSSSLEDKDLNNVVRVFAKKKDHTAMGILVSDIRNRGRT 138
Query: 186 LSMSSFAAAIDTLLKAEKISQAIGVFR---RYNRARESPEVVSIFIVSLCNHGYPDVAEH 356
+ +F+ + L+K + +A+G+F+ ++ R+S + +I + +LC G+ AE
Sbjct: 139 MESQTFSVVAEMLVKLGREDEALGIFKNLEKFKCPRDSFSLTAI-VNALCAKGHARKAEG 197
Query: 357 ILDPKMFSSYYEYSSTPPAKEIFYNHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYN 536
++ Y+ + + Y L+ GWS++ + A++ ++ +K G + L YN
Sbjct: 198 VV-------YHHKDTIAGVEPCIYRCLLYGWSVQENVKEARRVIKEMKSAGFELDLYCYN 250
Query: 537 AYLDCLC--KAANNPGAMFDTGFDIISEMNNVGVPLHISIFKTLITHLCNGERPDLAMLV 710
+L CLC A NP + +++ EM + + + L++ L R + +
Sbjct: 251 TFLRCLCGKNAKRNPSGLVPEALNVMMEMRSQRIAPTSVSYNILLSCLGRTRRVKESCQI 310
Query: 711 FDEMPKYKCHADYDVYXXXXXXXXXXXXWREDGDYLLETLFKARVEFDVEKSVGLVRQLI 890
+ M K C D+ Y + + G+ +++ + + + D + L+ L
Sbjct: 311 LELMKKAGCAPDWISYYLVARVLYLTGRFGK-GNKIVDEMIEQGLTPDRKFYYDLIGVLC 369
Query: 891 DVERYDAAIHMLNMIGNDEKKGL--VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVC 1064
VER + A+ + + G VYD +I L G F++ R +W+EA GV L
Sbjct: 370 GVERVNFALELFERMKRSSLGGYGPVYDVLIPKLCRGGDFEKGRELWDEAVATGVSLSCS 429
Query: 1065 SDILDPAKTEV 1097
SD+LDP+ TEV
Sbjct: 430 SDVLDPSITEV 440
>ref|XP_002318601.2| hypothetical protein POPTR_0012s07030g, partial [Populus trichocarpa]
gi|550326549|gb|EEE96821.2| hypothetical protein
POPTR_0012s07030g, partial [Populus trichocarpa]
Length = 410
Score = 125 bits (313), Expect = 5e-26
Identities = 94/374 (25%), Positives = 168/374 (44%), Gaps = 9/374 (2%)
Frame = +3
Query: 6 ACAEEAVSRRLLRFTNWA---IALPNCKDDPQLFNTALSVFIRKQDSKAMDTVLLAIKSN 176
+C EA SRR+LRF W+ + KDD FN + V K+D M ++ ++
Sbjct: 37 SCKHEAPSRRILRFFLWSNKVLDSEKLKDDD--FNHVIRVLAEKKDHTGMRILISDLRKE 94
Query: 177 MLLLSMSSFAAAIDTLLKAEKISQAIGVFRRYNRAR--ESPEVVSIFIVSLCNHGYPDVA 350
++ +FA +TL+K + +A+G+F+ + + + V+ I +LC G+ A
Sbjct: 95 GRVMDPQTFALVAETLVKLGREDEALGIFKNLEKFKCPQDGFAVTAIISALCAKGHAKKA 154
Query: 351 EHILDPKMFSSYYEYSSTPPAKEIFYNHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSA 530
+ + FS + + + Y L+ GWS++ + A+K +Q +K G P L
Sbjct: 155 QGV-----FSHHKNNKISGLEPCVVYRCLLYGWSVQENVKEARKIIQEMKGDGLIPDLFC 209
Query: 531 YNAYLDCLCKA--ANNPGAMFDTGFDIISEMNNVGVPLHISIFKTLITHLCNGERPDLAM 704
YN +L CLC+ NP + +++ EM + + + + TL++ L R +
Sbjct: 210 YNTFLKCLCERNLKRNPSGLVPEALNVMMEMRSYRIEPNSISYNTLLSSLGRARRVKESY 269
Query: 705 LVFDEMPKYKCHADYDVYXXXXXXXXXXXXWREDGDYLLETLFKARVEFDVEKSVGLVRQ 884
+ + M C D+ Y + + G+ +++ + + D + L+
Sbjct: 270 RMLETMKTTGCAPDWVSYFLVAKVMYLTGRFGK-GNEIVDEMIGQGLLPDRKFYYNLIGV 328
Query: 885 LIDVERYDAAIHMLNMIGNDEKKGL--VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLE 1058
L VER A+ + + G VYD +I L G F++ R +W EA GV
Sbjct: 329 LCGVERVSYALELFERMKTSSLGGYGPVYDILIPKLCKGGDFERGRELWEEATAMGVSFS 388
Query: 1059 VCSDILDPAKTEVR 1100
SD+LDP+ TE +
Sbjct: 389 CSSDVLDPSITEYK 402
>ref|NP_001159257.1| hypothetical protein [Zea mays] gi|223943049|gb|ACN25608.1| unknown
[Zea mays] gi|223944973|gb|ACN26570.1| unknown [Zea mays]
gi|414871380|tpg|DAA49937.1| TPA: hypothetical protein
ZEAMMB73_156182 [Zea mays] gi|414871381|tpg|DAA49938.1|
TPA: hypothetical protein ZEAMMB73_156182 [Zea mays]
Length = 499
Score = 123 bits (309), Expect = 1e-25
Identities = 102/373 (27%), Positives = 162/373 (43%), Gaps = 17/373 (4%)
Frame = +3
Query: 30 RRLLRFTNWAIALPNCKDDPQLFNTALSVFIRKQDSKAMDTVLLAIKSNMLLLSMSSFAA 209
RRLLRF W + + + + A+ V R D AM + + + ++ +F+
Sbjct: 89 RRLLRFLAWCRSKHSGVLGEEALDRAIGVLARAGDLTAMRIAIADAEKDGRRMAPETFST 148
Query: 210 AIDTLLKAEKISQAIGVFRRYNRARESPEVVS------------IFIVSLCNHGYPDVAE 353
ID L+KA + +A+ +FR R R PE S + +LC G+ A+
Sbjct: 149 VIDALVKAGREDEAVRLFRGLERQRLLPECGSRVGGHGVWSSSLAMVHALCKRGHAREAQ 208
Query: 354 HILDPKMFSSYYEYSSTPPAKEIFYNHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAY 533
++ + S P I L+ GW + G + A+K L +K +G L ++
Sbjct: 209 GVV-----WHHKSELSAEPMVSIVERSLLHGWCVHGNAKEARKVLNEMKSSGVPLGLPSF 263
Query: 534 NAYLDCLC--KAANNPGAMFDTGFDIISEMNNVGVPLHISIFKTLITHLCNGERPDLAML 707
N +L C+C NP A+ DI++EM GVP S F L++ L R A
Sbjct: 264 NEFLHCVCHRNLNFNPSALVPEAMDILTEMRTCGVPPAASSFNILLSCLGRARRVKEAYR 323
Query: 708 VFDEMPKYK--CHADYDVYXXXXXXXXXXXXWREDGDYLLETLFKARVEFDVEKSVGLVR 881
+ M + K C D+ Y G L++ + ++ V + GL+
Sbjct: 324 ILYLMREGKAGCSPDWVSYYLVVRVLYLTRRILR-GKRLVDAMLESGVLPTAKFFHGLIG 382
Query: 882 QLIDVERYDAAIHMLNMIGNDEK-KGLVYDAIIEGLATYGRFDQARYVWNEAQQNGVFLE 1058
L E D A+ M ++ E +YD +IE L GRF+ R +W+EA +G+ L
Sbjct: 383 ILCGTEEVDHALDMFKLMKRCELVDARIYDLLIEKLCRIGRFEIGRELWDEATNSGLVLG 442
Query: 1059 VCSDILDPAKTEV 1097
D+LDP KTEV
Sbjct: 443 CSQDLLDPLKTEV 455
>ref|XP_003622167.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497182|gb|AES78385.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 563
Score = 123 bits (308), Expect = 2e-25
Identities = 100/374 (26%), Positives = 175/374 (46%), Gaps = 8/374 (2%)
Frame = +3
Query: 18 EAVSRRLLRFTNWAIA-LPNCKDDPQLFNTALSVFIRKQDSKAMDTVLLAIKSNMLLLSM 194
EA +RRLLRF W+ L N +D +N AL VFI K+D AMD +L K ++
Sbjct: 157 EAHTRRLLRFFLWSNKNLSNDLEDKD-YNYALRVFIEKKDYTAMDILLGDFKKQGRVMEA 215
Query: 195 SSFAAAIDTLLKAEKISQAIGVFRRYNRARESPE--VVSIFIVSLCNHGYPDVAEHILDP 368
+F +T +K K +A+G+F+ ++ + + V+ I +LC+ G+ AE +
Sbjct: 216 QTFGVVAETYVKLGKEDEALGIFKNLDKYKCLIDEFTVTAIINALCSKGHAKRAEGV--- 272
Query: 369 KMFSSYYEYSSTPPAKEIFYNHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLD 548
+++ A Y L+ GWS++ + +++ +Q +K G P L YN +L
Sbjct: 273 ----AWHHKDKIKGALPCVYRSLLYGWSLERNVKESRRIIQEMKTNGVTPDLVCYNTFLR 328
Query: 549 CLCKA--ANNPGAMFDTGFDIISEMNNVGV-PLHISIFKTLITHLCNGERPDLAMLVFDE 719
CLC+ NNP + +++ EM + V P IS + L++ L R + + +
Sbjct: 329 CLCERNLRNNPSGLVLEALNVMMEMRSYKVFPTSIS-YNILLSCLGKTRRVKESCQILEA 387
Query: 720 MPKYKCHADYDVYXXXXXXXXXXXXWREDGDYLLETLFKARVEFDVEKSVGLVRQLIDVE 899
M K D+ Y + + G +++ + + + + + L+ L VE
Sbjct: 388 MNKSGVAPDWVSYYLVSRVLFLSGRFGK-GKEIVDQMIEKGLVPNHKFYYSLIGILCGVE 446
Query: 900 RYDAAIHMLNMIGNDEKKGL--VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDI 1073
R + A+ + + G VYD +I L G F++ R +W+E G+ L+ D+
Sbjct: 447 RVNHALDLFEKMKGSSVGGYGPVYDVLIPKLCRGGDFEKGRELWDEGTYMGITLQCSKDV 506
Query: 1074 LDPAKTEVRDREHP 1115
LDP+ TEV + P
Sbjct: 507 LDPSITEVYIPKRP 520
>ref|XP_004508741.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690-like
[Cicer arietinum]
Length = 1253
Score = 122 bits (306), Expect = 3e-25
Identities = 96/373 (25%), Positives = 173/373 (46%), Gaps = 7/373 (1%)
Frame = +3
Query: 18 EAVSRRLLRFTNWAIALPNCKDDPQLFNTALSVFIRKQDSKAMDTVLLAIKSNMLLLSMS 197
EA +RRLLRF W+ + + +N AL VF K+D AMD +L +K ++
Sbjct: 846 EAHTRRLLRFFLWSNKHLSRDLEDNDYNYALRVFAEKKDYTAMDILLGDLKKEGRVMDAQ 905
Query: 198 SFAAAIDTLLKAEKISQAIGVFRRYNRARESPE--VVSIFIVSLCNHGYPDVAEHILDPK 371
+F +T +K K +A+G+F+ ++ + + V+ I +LC+ G+ AE ++
Sbjct: 906 TFGLVAETFVKLGKEDEALGIFKNLDKYKCFIDEFTVTAIINALCSKGHAKRAEGVV--- 962
Query: 372 MFSSYYEYSSTPPAKEIFYNHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYLDC 551
++ Y L+ GWS++ + A++ +Q +K G P L YN +L C
Sbjct: 963 ----WHHKDKVKGVLPCIYRSLLYGWSVQRNVKEARRIIQEMKSNGVNPDLVCYNTFLRC 1018
Query: 552 LCKA--ANNPGAMFDTGFDIISEMNNVGV-PLHISIFKTLITHLCNGERPDLAMLVFDEM 722
LC+ +NP + +++ EM V P IS + L++ L R + + + M
Sbjct: 1019 LCERNLRHNPSGLVPEALNVMMEMRFYKVLPTSIS-YNILLSCLGKTRRVKESCQILEAM 1077
Query: 723 PKYKCHADYDVYXXXXXXXXXXXXWREDGDYLLETLFKARVEFDVEKSVGLVRQLIDVER 902
K D+ Y + + G +++ + + + + + L+ L VER
Sbjct: 1078 NKSGVAPDWVSYYLVARVLFLSGRFGK-GKEIVDQMIEKGLVPNHKFYYSLIGILCGVER 1136
Query: 903 YDAAIHMLNMIGNDEKKGL--VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCSDIL 1076
+ A+ + + G VYD +I L G F++ R +W+EA+ G+ L+ D+L
Sbjct: 1137 VNHALELFEKMKGSSLGGYGPVYDVLIPKLCRGGAFEKGRELWDEAKCMGITLQCSRDVL 1196
Query: 1077 DPAKTEVRDREHP 1115
DP+ TEV + P
Sbjct: 1197 DPSITEVYKPKRP 1209
>gb|EXB38552.1| hypothetical protein L484_008580 [Morus notabilis]
Length = 518
Score = 120 bits (302), Expect = 9e-25
Identities = 91/373 (24%), Positives = 172/373 (46%), Gaps = 9/373 (2%)
Frame = +3
Query: 6 ACAEEAVSRRLLRFTNWAIALPNCKDDPQLFNTALSVFIRKQDSKAMDTVLLAIKSNMLL 185
+C EA +RRLLRF W+ C + + +N A+ VF K+D A++ ++ +K
Sbjct: 78 SCKTEAPTRRLLRFFLWSHKNLKCDLEDKDYNHAIRVFAGKKDHTALEILVSDLKKGGRA 137
Query: 186 LSMSSFAAAIDTLLKAEKISQAIGVFRRYNRAR--ESPEVVSIFIVSLCNHGYPDVAEHI 359
L ++A +TL+K + +A+G+F+ ++ + ++ V+ + +LC G+ AE +
Sbjct: 138 LESQTYAIVAETLVKLGREDEALGIFKNSDKYKCPQNSFTVTAVVNALCAQGHAKRAEGV 197
Query: 360 LDPKMFSSYYEYSSTPPAKEIFYNHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNA 539
+ + + Y L+ GWS + + A++ ++ +K G P L YN
Sbjct: 198 VG-------HHKDRISGMERCIYRSLLYGWSEQENVKEARRIIKEMKSAGINPDLFCYNT 250
Query: 540 YLDCLCK--AANNPGAMFDTGFDIISEMNNVGVPLHISIFKTLITHLCNGERPDLAMLVF 713
+L CLC+ NP + +++ EM + + + + L++ L R A +
Sbjct: 251 FLRCLCERNLKRNPSGLVPEALNVMMEMRSYMITPNSISYNILLSCLGRARRVKEACQIL 310
Query: 714 DEMPKYKCHADYDVYXXXXXXXXXXXXWREDGDYLLETLFKARVEFDVEKSVGLVRQLID 893
+ M + C D+ Y + + G+ L++ + + + + L+ L
Sbjct: 311 ERMKQAGCSPDWMSYYLVIRVLYLTMRFGK-GNKLVDEMIGEGLVPNCKFYYDLIGVLCG 369
Query: 894 VERYDAAIHMLNMIGNDEKKGL-----VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLE 1058
VER + L + + +K+ L VYD +I L G F++ R +W EA GV
Sbjct: 370 VER---PYYALELFEHMKKRSLGGYGPVYDVLIPKLCRGGDFEKGRELWIEAMNMGVDFC 426
Query: 1059 VCSDILDPAKTEV 1097
SD+LDP+ T+V
Sbjct: 427 CSSDVLDPSITKV 439
>gb|EMT32379.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 706
Score = 120 bits (300), Expect = 1e-24
Identities = 106/385 (27%), Positives = 178/385 (46%), Gaps = 21/385 (5%)
Frame = +3
Query: 6 ACAEEAVS-RRLLRFTNWAIALPNCKDDPQLFNTALSVFIRKQDSKAMDTVLLAIKSNML 182
+C+E + S RRLLRF +W + + + A++V R D A+ + + +
Sbjct: 84 SCSERSDSGRRLLRFLSWCRSKDPAGLGDEEHDRAIAVLARMGDLTAIKIAVGDGEKDGR 143
Query: 183 LLSMSSFAAAIDTLLKAEKISQAIGVFRRYNRARESPE-----------VVSIFIV-SLC 326
++ +F A ++ L+KA K A+ +FR R + P+ S+ +V +LC
Sbjct: 144 RMAPETFTAVVEALVKAGKEDDAVRLFRGLERQKLLPQQGPGAGGEGIWCSSLAMVQTLC 203
Query: 327 NHGYPDVAEHILDPKMFSSYYEYSSTPPAKEIFYNHLVCGWSIKGPPRLAKKYLQTIKFT 506
GY A+ ++ + S P I L+ GW + G + A++ L IK +
Sbjct: 204 MKGYAREAQGVV-----WHHKSELSAEPMVSIVQRSLLHGWCVHGNAKEARRVLDDIKSS 258
Query: 507 GQKPSLSAYNAYLDCLC--KAANNPGAMFDTGFDIISEMNNVGVPLHISIFKTLITHLCN 680
G L ++N +L+C+C NP A+ DI++EM + GV S F L++ L
Sbjct: 259 GCPLGLPSFNDFLNCVCHRNLKFNPSALVSEAMDILTEMRSYGVTPDSSSFNILLSCLGR 318
Query: 681 GERPDLAMLVFDEMPKYK--CHADYDVYXXXXXXXXXXXXWREDGDYLLETLFKARVEFD 854
R A + M + + C D+ Y G L+E + ++ V
Sbjct: 319 ARRVKEAYKILYLMREGEEGCSPDWVSYYLVVKVLYLTDRIIR-GKRLVEDMLESGVLPT 377
Query: 855 VEKSVGLVRQLIDVERYDAAIHMLNMIGNDEKKGLV----YDAIIEGLATYGRFDQARYV 1022
+ GL+ L E+ D A+ M ++ + GLV YD +IE L+ GRF+ A+ +
Sbjct: 378 AKFFHGLIGILCGTEKVDHALDMFKIM---KSCGLVDTHTYDLLIEKLSRSGRFEVAKEL 434
Query: 1023 WNEAQQNGVFLEVCSDILDPAKTEV 1097
W++A +NG+ L SD+LDP KTEV
Sbjct: 435 WDDATKNGIVLGCSSDLLDPLKTEV 459
>ref|XP_006280363.1| hypothetical protein CARUB_v10026291mg [Capsella rubella]
gi|482549067|gb|EOA13261.1| hypothetical protein
CARUB_v10026291mg [Capsella rubella]
Length = 490
Score = 118 bits (296), Expect = 4e-24
Identities = 94/373 (25%), Positives = 172/373 (46%), Gaps = 9/373 (2%)
Frame = +3
Query: 6 ACAEEAVSRRLLRFTNWAIALPNCKDDPQLFNTALSVFIRKQDSKAMDTVLLAIKSNMLL 185
+C E RRLLRF +W+ + FN L V K+D+ A+ +L ++
Sbjct: 79 SCKNETSPRRLLRFFSWSCKNLGSSLHDKEFNHVLRVLAEKKDNTAIQILLSDLRKENRA 138
Query: 186 LSMSSFAAAIDTLLKAEKISQAIGVFR---RYNRARESPEVVSIFIVSLCNHGYPDVAEH 356
+ +F+ +TL+K K AIG+F+ +++ ++S V +I I +LC+ G+ A
Sbjct: 139 MDKQTFSIVAETLVKIGKEDDAIGIFKILDKFSCPQDSFTVTAI-ISALCSRGHVKRALG 197
Query: 357 ILDPKMFSSYYEYSSTPPAKEI-FYNHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAY 533
++ + + E+ Y L+ GWS++ + A++ +Q +K G P L +
Sbjct: 198 VM--------HHHKDAISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCF 249
Query: 534 NAYLDCLCK--AANNPGAMFDTGFDIISEMNNVGV-PLHISIFKTLITHLCNGERPDLAM 704
N+ L CLC+ NP + +I+ EM + + P IS + TL++ L R +
Sbjct: 250 NSLLTCLCERNVNRNPSGLVPEALNIMLEMKSYKIQPTSIS-YNTLLSCLGRTRRVKESC 308
Query: 705 LVFDEMPKYKCHADYDVYXXXXXXXXXXXXWREDGDYLLETLFKARVEFDVEKSVGLVRQ 884
+ ++M + C D Y + + G+ +++ + + + + + L+
Sbjct: 309 QILEQMKRSGCDPDTASYYFVVRVLYLTGRFGK-GNQIVDEMIERELRPERKFYYDLIGV 367
Query: 885 LIDVERYDAAIHMLNMIGNDEKKGL--VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLE 1058
L VER + A+ + + G VYD +I L G F++ + +W EA V L
Sbjct: 368 LCGVERVNFALQLFEKMKRSSVGGYGPVYDLLIPKLCKGGNFEKGKELWEEAMSLDVTLC 427
Query: 1059 VCSDILDPAKTEV 1097
D+LDP+ TEV
Sbjct: 428 SSIDLLDPSVTEV 440
>ref|XP_006394515.1| hypothetical protein EUTSA_v10004085mg [Eutrema salsugineum]
gi|557091154|gb|ESQ31801.1| hypothetical protein
EUTSA_v10004085mg [Eutrema salsugineum]
Length = 489
Score = 117 bits (294), Expect = 7e-24
Identities = 91/372 (24%), Positives = 168/372 (45%), Gaps = 8/372 (2%)
Frame = +3
Query: 6 ACAEEAVSRRLLRFTNWAIA-LPNCKDDPQLFNTALSVFIRKQDSKAMDTVLLAIKSNML 182
+C +E RRLLRF +W+ L +C +D + FN L V K+D A+ +L ++
Sbjct: 78 SCKDETSPRRLLRFFSWSCKNLGSCLED-KTFNHVLRVLAEKKDHTAIQILLSDLRKQNR 136
Query: 183 LLSMSSFAAAIDTLLKAEKISQAIGVFRRYNR--ARESPEVVSIFIVSLCNHGYPDVAEH 356
+ +F+ +TL+K + AIG+F+ ++ ++ V+ I +LC+ G+ A
Sbjct: 137 AMDKQTFSLVAETLVKIGREEDAIGIFKILDKFSCQQDSFTVTAIISALCSRGHVKRALG 196
Query: 357 ILDPKMFSSYYEYSSTPPAKEI-FYNHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAY 533
++ + + + E+ Y L+ GWS++ + A++ +Q +K + P L Y
Sbjct: 197 VM--------HHHKALISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSSRITPDLFCY 248
Query: 534 NAYLDCLCK--AANNPGAMFDTGFDIISEMNNVGVPLHISIFKTLITHLCNGERPDLAML 707
N L CLC+ NP + +I+ EM + + + L++ L R +
Sbjct: 249 NTMLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTCISYNILLSCLARTRRVKESCQ 308
Query: 708 VFDEMPKYKCHADYDVYXXXXXXXXXXXXWREDGDYLLETLFKARVEFDVEKSVGLVRQL 887
+ ++M K C D Y + + G+ ++ + + + + L+ L
Sbjct: 309 ILEQMKKSGCDPDTASYYFVVRVLYLTGRFGK-GNQTVDEMIERGLRPERRFYYDLIGVL 367
Query: 888 IDVERYDAAIHMLNMIGNDEKKGL--VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEV 1061
V+R + A+ + + G VYD +I L G F++ R +W EA V L
Sbjct: 368 CGVKRVNFALQLFAKMKRSSVGGYGPVYDLLIPKLCKGGDFEKGRELWEEAMSLDVTLSC 427
Query: 1062 CSDILDPAKTEV 1097
D+LDP+ TEV
Sbjct: 428 SVDLLDPSLTEV 439
>ref|XP_002302931.1| predicted protein [Populus trichocarpa]
Length = 516
Score = 117 bits (292), Expect = 1e-23
Identities = 105/397 (26%), Positives = 179/397 (45%), Gaps = 19/397 (4%)
Frame = +3
Query: 30 RRLLRFTNWAIALPNCKDDPQLFNTALSVFIRKQDSKAMDTVLLAIKSNMLLLSMSSFAA 209
R ++ F NW I N + + + + F R++D KA +L+ KS + + F +
Sbjct: 121 RTVIGFHNWLIKDANFEQNDESLALFVDYFGRRKDFKAAHDLLVEGKS---VAGVKCFES 177
Query: 210 AIDTLLKAEKISQAIGVFRRYNRA---RESPEVVSIFIVSLCNHGYPDVAEHILDPKMFS 380
ID L++A + +Q IG F R R + E ++ + LC +GY AE KM
Sbjct: 178 MIDRLVRAGRTTQVIGFFERMERDYGFKRDKESLTFVVQKLCENGYASYAE-----KMVK 232
Query: 381 SYYEYSSTPPAKEIFYNHLVC-----GWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYL 545
+ A EIF + +C GW + G AK+ + G + A+NA L
Sbjct: 233 NL--------ANEIFPDDGICDLLIKGWCVDGKLEEAKRLAGEMYRGGFEIGTMAFNAML 284
Query: 546 DCLCKAAN--NPGAMFDTGFDIISEMNNVGVPLHISIFKTLITHLCNGERPDLAMLVFDE 719
DC+CK +P + ++ EM+ GVP ++ F LI++LC R + AM +F
Sbjct: 285 DCVCKLCREKDPFRLESEVEKVLMEMDIRGVPRNVETFNVLISNLCKVRRTEDAMKLFSR 344
Query: 720 MPKYKCHADYDVYXXXXXXXXXXXXWREDGDYLLETLFKARV--EFDVEKSVGLVRQLID 893
+ ++ C D + E GD +++ + A + D + G ++ L
Sbjct: 345 IGEWGCCPDETTFLVLIRSLYQAARVGE-GDEMIDRMKSAGYGDKLDKKAYYGFLKILCG 403
Query: 894 VERYDAAIHMLNMIGNDE-KKGL-VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCS 1067
+ER + A+ + M+ D K G+ YD ++ T+ R D+A ++NEA NGV +
Sbjct: 404 IERLEHAMSVFEMMKADGCKPGIKTYDLLMGKWCTHNRLDKANVLYNEALSNGVTVTPKE 463
Query: 1068 DILDP-----AKTEVRDREHPWFPCLTLVASKPRRIK 1163
+DP K ++++ P +A K RR+K
Sbjct: 464 YRVDPKFMKKPKAVKKEKKRETLP--EKMARKRRRLK 498
>gb|EOY22114.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 494
Score = 115 bits (289), Expect = 3e-23
Identities = 100/395 (25%), Positives = 178/395 (45%), Gaps = 17/395 (4%)
Frame = +3
Query: 30 RRLLRFTNWAIALPNCKDDPQLFNTALSVFIRKQDSKAMDTVLLAIKSNMLLLSMSSFAA 209
R +L F +W ++ PN + + + F R++D KA +L+ KS + +F +
Sbjct: 100 RTVLGFNDWLLSDPNFNHTDETLSFFIDYFGRRKDFKAAHDLLVNNKS---VAGPKTFES 156
Query: 210 AIDTLLKAEKISQAIGVFRRYNRA---RESPEVVSIFIVSLCNHGYPDVAEHILDPKMFS 380
++D L++A + +Q +G F + + E + + + LC +GY +
Sbjct: 157 SVDRLVRAGRPAQVLGFFEGMGKDYGFKRDKESLRLIVEKLCENGY-------------A 203
Query: 381 SYYEYSSTPPAKEIFYNHLVC-----GWSIKGPPRLAKKYLQTIKFTGQKPSLSAYNAYL 545
SY E A EIF + ++C GW + G AK+ + G + AYNA L
Sbjct: 204 SYAEKMVKNSANEIFPDEMICDLLIKGWCVDGKLEEAKRLAGEMYRGGFEIGTMAYNAML 263
Query: 546 DCLCKAAN--NPGAMFDTGFDIISEMNNVGVPLHISIFKTLITHLCNGERPDLAMLVFDE 719
DC+CK +P + ++ +M+ GVP ++ F L+ +LC + + AM +F
Sbjct: 264 DCVCKLCRKKDPFRLHSEAEKVLLDMDIYGVPRNVETFNVLMNNLCKIRKTEDAMKLFYR 323
Query: 720 MPKYKCHADYDVYXXXXXXXXXXXXWREDGDYLLETLFKARV--EFDVEKSVGLVRQLID 893
M ++ C+ D + Y E GD +++ + A + ++ ++ L
Sbjct: 324 MGEWGCYPDAESYLILIRSLYQAARVAE-GDEMIDRMKSAGFGDKLGEKEYYSFLKILCG 382
Query: 894 VERYDAAIHMLNMIGNDE-KKGL-VYDAIIEGLATYGRFDQARYVWNEAQQNGVFLEVCS 1067
VER + AI + + D K G+ YD ++ + R D+A ++NEA +NGV +E
Sbjct: 383 VERVEHAIIVFKKMKADGCKPGIKTYDLLMGKWCGHNRLDRANALYNEAVENGVPVEPKP 442
Query: 1068 DILDP---AKTEVRDREHPWFPCLTLVASKPRRIK 1163
+DP KT+ E +A K RR+K
Sbjct: 443 YRVDPRYMKKTKAVKEEKKRETLPEKMARKRRRLK 477
>ref|NP_200945.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171474|sp|Q9FLJ6.1|PP439_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g61370, mitochondrial; Flags: Precursor
gi|9757858|dbj|BAB08492.1| unnamed protein product
[Arabidopsis thaliana] gi|17529064|gb|AAL38742.1| unknown
protein [Arabidopsis thaliana] gi|23296891|gb|AAN13197.1|
unknown protein [Arabidopsis thaliana]
gi|332010076|gb|AED97459.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 487
Score = 115 bits (289), Expect = 3e-23
Identities = 92/374 (24%), Positives = 161/374 (43%), Gaps = 10/374 (2%)
Frame = +3
Query: 6 ACAEEAVSRRLLRFTNWAIALPNCKDDPQLFNTALSVFIRKQDSKAMDTVLLAIKSNMLL 185
+C E RRLLRF +W+ + FN L V K+D AM +L ++
Sbjct: 76 SCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLRKENRA 135
Query: 186 LSMSSFAAAIDTLLKAEKISQAIGVFRRYNR--ARESPEVVSIFIVSLCNHGYPDVAEHI 359
+ +F+ +TL+K K AIG+F+ ++ + V+ I +LC+ G+ A +
Sbjct: 136 MDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGV 195
Query: 360 LDPKMFSSYYEYSSTPPAKEI-FYNHLVCGWSIKGPPRLAKKYLQTIKFTGQKPSLSAYN 536
+ + + E+ Y L+ GWS++ + A++ +Q +K G P L +N
Sbjct: 196 M--------HHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFN 247
Query: 537 AYLDCLCK--AANNPGAMFDTGFDIISEMNNVGVPLHISIFKTLITHLCNGERPDLAMLV 710
+ L CLC+ NP + +I+ EM + + + L++ L R + +
Sbjct: 248 SLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQI 307
Query: 711 FDEMPKYKCHADYDVYXXXXXXXXXXXXWREDG---DYLLETLFKARVEFDVEKSVGLVR 881
++M + C D Y + + D ++E F+ +F + L+
Sbjct: 308 LEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYD----LIG 363
Query: 882 QLIDVERYDAAIHMLNMIGNDEKKGL--VYDAIIEGLATYGRFDQARYVWNEAQQNGVFL 1055
L VER + A+ + + G VYD +I L G F++ R +W EA V L
Sbjct: 364 VLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTL 423
Query: 1056 EVCSDILDPAKTEV 1097
+LDP+ TEV
Sbjct: 424 SCSISLLDPSVTEV 437