BLASTX nr result
ID: Ephedra27_contig00015391
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00015391
(662 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_003323559.1| UvrD/REP helicase [Thermobaculum terrenum AT... 103 6e-20
gb|ETJ99897.1| putative ATP-dependent DNA helicase PcrA [Eubacte... 92 1e-16
ref|WP_002654753.1| ATPase AAA [Blastopirellula marina] gi|87288... 90 5e-16
ref|WP_005583414.1| ATP-dependent DNA helicase [Clostridium ultu... 90 7e-16
ref|WP_020146913.1| hypothetical protein [Verrucomicrobia bacter... 89 9e-16
ref|WP_002492700.1| ATP-dependent DNA helicase PcrA [Staphylococ... 89 9e-16
ref|YP_005760179.1| ATP-dependent DNA helicase [Staphylococcus l... 89 9e-16
ref|WP_002461366.1| ATP-dependent DNA helicase PcrA [Staphylococ... 89 9e-16
ref|YP_003471280.1| ATP-dependent DNA helicase UvrD [Staphylococ... 89 9e-16
ref|WP_022088954.1| putative ATP-dependent DNA helicase PcrA [Eu... 89 1e-15
ref|YP_002314615.1| ATP-dependent DNA helicase PcrA [Anoxybacill... 89 1e-15
ref|YP_004886959.1| ATP-dependent DNA helicase PcrA [Tetragenoco... 88 2e-15
ref|YP_003995608.1| ATP-dependent DNA helicase PcrA [Halanaerobi... 88 2e-15
ref|WP_019107074.1| hypothetical protein [Peptoniphilus senegale... 88 3e-15
ref|WP_010753869.1| ATP-dependent DNA helicase PcrA [Enterococcu... 88 3e-15
ref|YP_003369305.1| UvrD/REP helicase [Pirellula staleyi DSM 606... 88 3e-15
ref|YP_002353285.1| UvrD/REP helicase [Dictyoglomus turgidum DSM... 88 3e-15
gb|EUZ67964.1| ATP-dependent DNA helicase pcrA [Staphylococcus s... 87 3e-15
ref|WP_022757523.1| ATP-dependent DNA helicase PcrA [Butyrivibri... 87 3e-15
ref|WP_022755046.1| ATP-dependent DNA helicase PcrA [Butyrivibri... 87 3e-15
>ref|YP_003323559.1| UvrD/REP helicase [Thermobaculum terrenum ATCC BAA-798]
gi|502639298|ref|WP_012875768.1| UvrD/REP helicase
[Thermobaculum terrenum] gi|269790596|gb|ACZ42737.1|
UvrD/REP helicase [Thermobaculum terrenum ATCC BAA-798]
Length = 779
Score = 103 bits (256), Expect = 6e-20
Identities = 67/190 (35%), Positives = 106/190 (55%), Gaps = 6/190 (3%)
Frame = -1
Query: 647 LTEAQLSAIYAPLEKPLLILASAGSGKTLVLCHRILFLISKGISAKDILALTFTRRAGQD 468
L + QL A+ AP + P+L+LA GSGKT VL HRI FL+S+G+S +ILA+TFT +A ++
Sbjct: 15 LNDKQLEAVTAP-DGPVLVLAGPGSGKTRVLTHRIAFLLSQGVSPFNILAVTFTNKAARE 73
Query: 467 LLQKLRHLVSSQHYLCEGIDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQ 288
+ +++ LV ++ +I +GTFHS C VLR G+SPNFV++ Q
Sbjct: 74 MRERIERLVGGAFG-----SYEARNITMGTFHSICSRVLRRDGGAIGISPNFVIYDDDDQ 128
Query: 287 LDLLENVV------EDWYAQRKTQSLHGKSFQSKLGDSNNYKKESLLTSGNEKSFIKAKA 126
+ L++ + E YA R Q+ S +S L D +Y + + + +E I A+
Sbjct: 129 IRLIKQALNEIGLDEKQYAPRSIQA-RISSAKSALLDPEDYSSQGVSSYFDE---IAARV 184
Query: 125 FQFLQDLRNV 96
++ Q L +
Sbjct: 185 YRRYQQLLEI 194
>gb|ETJ99897.1| putative ATP-dependent DNA helicase PcrA [Eubacterium nodatum ATCC
33099]
Length = 737
Score = 92.0 bits (227), Expect = 1e-16
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 15/231 (6%)
Frame = -1
Query: 650 NLTEAQLSAIYAPLEKPLLILASAGSGKTLVLCHRILFLISKGISAKDILALTFTRRAGQ 471
NL + Q A+ + PLL+LA AGSGKT + HRI ++I +GIS ILA+TFT +A
Sbjct: 5 NLNQKQREAV-EQISGPLLVLAGAGSGKTSTMTHRIAYMIEQGISPYSILAVTFTNKAAS 63
Query: 470 DLLQKLRHLVSSQHYLCEGIDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKM 291
++ ++ LV D+ + TFHS CL +LR +PE G NF+++
Sbjct: 64 EMRGRVEELVGGV----------ARDMWIMTFHSMCLRILRIYPETIGYEKNFLIYDTTD 113
Query: 290 QLDLLENVVED---------------WYAQRKTQSLHGKSFQSKLGDSNNYKKESLLTSG 156
Q L+++++++ + K + + + + + D+ K SL+
Sbjct: 114 QRTLIKSIIKEKGMNEKEFPPRYLLAAISDCKEKGISAEKYTETVEDNYKTKAISLVYRE 173
Query: 155 NEKSFIKAKAFQFLQDLRNVQLLKANNDTTNTELDGRNDNVFSKWVLQNYQ 3
+ K A F L N L NN+ E+ + N F ++ YQ
Sbjct: 174 YSQRLKKNNAMDFDDILLNCVKLFENNE----EILSKYQNRFKYIMVDEYQ 220
>ref|WP_002654753.1| ATPase AAA [Blastopirellula marina] gi|87288212|gb|EAQ80109.1|
ATP-dependent DNA helicase [Blastopirellula marina DSM
3645]
Length = 759
Score = 90.1 bits (222), Expect = 5e-16
Identities = 47/131 (35%), Positives = 73/131 (55%)
Frame = -1
Query: 650 NLTEAQLSAIYAPLEKPLLILASAGSGKTLVLCHRILFLISKGISAKDILALTFTRRAGQ 471
+LT+ Q A+ ++ PLL+LA GSGKT V+ HRI L+S+G+ I ALTFT +A
Sbjct: 8 SLTDPQREAVLH-VDGPLLVLAGPGSGKTRVITHRIAHLLSQGVRPTQIAALTFTNKAAD 66
Query: 470 DLLQKLRHLVSSQHYLCEGIDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKM 291
++ +L L + ++ +GTFH FC +LR + EY GL PN+ ++
Sbjct: 67 EMRSRLDRLAPGE------------NVWIGTFHRFCARLLRQYAEYRGLQPNYTIYDTSD 114
Query: 290 QLDLLENVVED 258
L LL+ + +
Sbjct: 115 SLSLLKRTIRE 125
>ref|WP_005583414.1| ATP-dependent DNA helicase [Clostridium ultunense]
gi|452994703|emb|CCQ93678.1| ATP-dependent DNA helicase
[Clostridium ultunense Esp]
Length = 733
Score = 89.7 bits (221), Expect = 7e-16
Identities = 58/160 (36%), Positives = 88/160 (55%), Gaps = 2/160 (1%)
Frame = -1
Query: 647 LTEAQLSAIYAPLEKPLLILASAGSGKTLVLCHRILFLISKGISAKDILALTFTRRAGQD 468
L E Q A+ + E PLLILA AGSGKT VL HR+ +LI++GIS ILA+TFT +A ++
Sbjct: 13 LNETQRKAVLST-EGPLLILAGAGSGKTRVLTHRVAYLIAQGISPWSILAITFTNKAAKE 71
Query: 467 LLQKLRHLVSSQHYLCEGIDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQ 288
+ +++ LV +I + TFH+ C+ +LR E GLS NF + +
Sbjct: 72 MKERVEKLVGQ----------GSEEIWISTFHALCVRILRRDGEQIGLSRNFSILDTQDS 121
Query: 287 LDLLENVVEDWYAQRKTQSLHGKSFQ--SKLGDSNNYKKE 174
L ++ V+ K ++L K ++ S LG + +K E
Sbjct: 122 LSVIRGVL-------KEKNLDPKKYEPRSVLGKISGWKNE 154
>ref|WP_020146913.1| hypothetical protein [Verrucomicrobia bacterium SCGC AAA164-E04]
Length = 681
Score = 89.4 bits (220), Expect = 9e-16
Identities = 45/117 (38%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
Frame = -1
Query: 602 PLLILASAGSGKTLVLCHRILFLISKGISAKDILALTFTRRAGQDLLQKLRHLVSSQHYL 423
P+LILA AG+GKT V+ HRI FL+ KG+ +ILA+TFT +A +++ +++R L+
Sbjct: 20 PVLILAGAGTGKTRVITHRIAFLLQKGVMPHNILAVTFTNKAAREMQERVRKLLPKDKKK 79
Query: 422 CE-GIDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDW 255
+ + N + TFHSFC+ VLR + + G NFV++ QL + + DW
Sbjct: 80 SDPSSEARPNKPTICTFHSFCVRVLRRYIDKLGYKRNFVIYDQSDQLGTIRKLTSDW 136
>ref|WP_002492700.1| ATP-dependent DNA helicase PcrA [Staphylococcus lugdunensis]
gi|374840471|gb|EHS03964.1| ATP-dependent DNA helicase
PcrA [Staphylococcus lugdunensis VCU139]
gi|580827979|gb|EVI49788.1| ATP-dependent DNA helicase
pcrA [Staphylococcus lugdunensis UCIM6116]
Length = 730
Score = 89.4 bits (220), Expect = 9e-16
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 22/200 (11%)
Frame = -1
Query: 650 NLTEAQLSAIYAPLEKPLLILASAGSGKTLVLCHRILFLIS-KGISAKDILALTFTRRAG 474
N+ + Q A+ E PLLI+A AGSGKT VL HRI +L++ KG+S +ILA+TFT +A
Sbjct: 7 NMNDEQSEAVRTT-EGPLLIMAGAGSGKTRVLTHRIAYLLNEKGVSPYNILAITFTNKAA 65
Query: 473 QDLLQKLRHLVSSQHYLCEGIDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPK 294
+++ Q++ LV + + I + TFHS C+ +LR + G+ NF + P
Sbjct: 66 KEMKQRVEQLVGE----------EASVIWMSTFHSMCVKILRRDADRIGIERNFTIIDPT 115
Query: 293 MQLDLLENVVEDWYAQRKTQSLHGKSFQSKL-------------------GDSNNYKKES 171
Q ++++V+ K +++ K F+ ++ ++NNY ++
Sbjct: 116 DQKSVIKDVL-------KNENIDSKKFEPRMFISAISNLKNELKTPDDAQKEANNYHEQM 168
Query: 170 LLT--SGNEKSFIKAKAFQF 117
+ T SG ++ + +A F
Sbjct: 169 IATVYSGYQRQLSRNEALDF 188
>ref|YP_005760179.1| ATP-dependent DNA helicase [Staphylococcus lugdunensis N920143]
gi|488408558|ref|WP_002477943.1| ATP-dependent DNA
helicase PcrA [Staphylococcus lugdunensis]
gi|339894262|emb|CCB53531.1| ATP-dependent DNA helicase
[Staphylococcus lugdunensis N920143]
gi|410877320|gb|EKS25212.1| ATP-dependent DNA helicase
pcrA [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 730
Score = 89.4 bits (220), Expect = 9e-16
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 22/200 (11%)
Frame = -1
Query: 650 NLTEAQLSAIYAPLEKPLLILASAGSGKTLVLCHRILFLIS-KGISAKDILALTFTRRAG 474
N+ + Q A+ E PLLI+A AGSGKT VL HRI +L++ KG+S +ILA+TFT +A
Sbjct: 7 NMNDEQSEAVRTT-EGPLLIMAGAGSGKTRVLTHRIAYLLNEKGVSPYNILAITFTNKAA 65
Query: 473 QDLLQKLRHLVSSQHYLCEGIDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPK 294
+++ Q++ LV + + I + TFHS C+ +LR + G+ NF + P
Sbjct: 66 KEMKQRVEQLVGE----------EASVIWMSTFHSMCVKILRRDADRIGIERNFTIIDPT 115
Query: 293 MQLDLLENVVEDWYAQRKTQSLHGKSFQSKL-------------------GDSNNYKKES 171
Q ++++V+ K +++ K F+ ++ ++NNY ++
Sbjct: 116 DQKSVIKDVL-------KNENIDSKKFEPRMFISAISNLKNELKTPDDAQKEANNYHEQM 168
Query: 170 LLT--SGNEKSFIKAKAFQF 117
+ T SG ++ + +A F
Sbjct: 169 IATVYSGYQRQLSRNEALDF 188
>ref|WP_002461366.1| ATP-dependent DNA helicase PcrA [Staphylococcus lugdunensis]
gi|315494839|gb|EFU83177.1| ATP-dependent DNA helicase
PcrA [Staphylococcus lugdunensis M23590]
Length = 730
Score = 89.4 bits (220), Expect = 9e-16
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 22/200 (11%)
Frame = -1
Query: 650 NLTEAQLSAIYAPLEKPLLILASAGSGKTLVLCHRILFLIS-KGISAKDILALTFTRRAG 474
N+ + Q A+ E PLLI+A AGSGKT VL HRI +L++ KG+S +ILA+TFT +A
Sbjct: 7 NMNDEQSEAVRTT-EGPLLIMAGAGSGKTRVLTHRIAYLLNEKGVSPYNILAITFTNKAA 65
Query: 473 QDLLQKLRHLVSSQHYLCEGIDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPK 294
+++ Q++ LV + + I + TFHS C+ +LR + G+ NF + P
Sbjct: 66 KEMKQRVEQLVGE----------EASVIWMSTFHSMCVKILRRDADRIGIERNFTIIDPT 115
Query: 293 MQLDLLENVVEDWYAQRKTQSLHGKSFQSKL-------------------GDSNNYKKES 171
Q ++++V+ K +++ K F+ ++ ++NNY ++
Sbjct: 116 DQKSVIKDVL-------KNENIDSKKFEPRMFISAISNLKNELKTPDDAQKEANNYHEQM 168
Query: 170 LLT--SGNEKSFIKAKAFQF 117
+ T SG ++ + +A F
Sbjct: 169 IATVYSGYQRQLSRNEALDF 188
>ref|YP_003471280.1| ATP-dependent DNA helicase UvrD [Staphylococcus lugdunensis
HKU09-01] gi|502755813|ref|WP_012990797.1| ATP-dependent
DNA helicase PcrA [Staphylococcus lugdunensis]
gi|289179908|gb|ADC87153.1| ATP-dependent DNA helicase
UvrD/PcrA [Staphylococcus lugdunensis HKU09-01]
Length = 746
Score = 89.4 bits (220), Expect = 9e-16
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 22/200 (11%)
Frame = -1
Query: 650 NLTEAQLSAIYAPLEKPLLILASAGSGKTLVLCHRILFLIS-KGISAKDILALTFTRRAG 474
N+ + Q A+ E PLLI+A AGSGKT VL HRI +L++ KG+S +ILA+TFT +A
Sbjct: 7 NMNDEQSEAVRTT-EGPLLIMAGAGSGKTRVLTHRIAYLLNEKGVSPYNILAITFTNKAA 65
Query: 473 QDLLQKLRHLVSSQHYLCEGIDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPK 294
+++ Q++ LV + + I + TFHS C+ +LR + G+ NF + P
Sbjct: 66 KEMKQRVEQLVGE----------EASVIWMSTFHSMCVKILRRDADRIGIERNFTIIDPT 115
Query: 293 MQLDLLENVVEDWYAQRKTQSLHGKSFQSKL-------------------GDSNNYKKES 171
Q ++++V+ K +++ K F+ ++ ++NNY ++
Sbjct: 116 DQKSVIKDVL-------KNENIDSKKFEPRMFISAISNLKNELKTPDDAQKEANNYHEQM 168
Query: 170 LLT--SGNEKSFIKAKAFQF 117
+ T SG ++ + +A F
Sbjct: 169 IATVYSGYQRQLSRNEALDF 188
>ref|WP_022088954.1| putative ATP-dependent DNA helicase PcrA [Eubacterium sp. CAG:156]
gi|524265551|emb|CDA29618.1| putative ATP-dependent DNA
helicase PcrA [Eubacterium sp. CAG:156]
Length = 752
Score = 89.0 bits (219), Expect = 1e-15
Identities = 73/227 (32%), Positives = 114/227 (50%), Gaps = 12/227 (5%)
Frame = -1
Query: 647 LTEAQLSAIYAPLEKPLLILASAGSGKTLVLCHRILFLI-SKGISAKDILALTFTRRAGQ 471
L + Q A++ E PLLILA AGSGKT VL HR +LI KG+S +I+A+TFT +A
Sbjct: 7 LNDMQQMAVFHT-EGPLLILAGAGSGKTRVLTHRAAYLIEEKGVSPWNIMAITFTNKAAS 65
Query: 470 DLLQKLRHLVSSQHYLCEGIDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKM 291
++ +++ ++V F + I V TFHS C+ +LR E+ G F ++
Sbjct: 66 EMRERINNIVG----------FGADQIWVSTFHSTCVRILRRHIEFLGYDNRFTIYDADD 115
Query: 290 QLDLLENVVEDWYAQRKTQSLHGKSFQSK--LGDSNNYKKESL-------LTSGNEKSFI 138
Q L++++V K +L K ++ + G ++YK E + +T G+ +
Sbjct: 116 QKSLIKDIV-------KRMNLDSKFYKERAVAGKISSYKDELISPERAIEITKGDLRENT 168
Query: 137 KAKAFQFLQDLRNVQLLKANNDTTNTELDGRNDNVFSKW--VLQNYQ 3
AK + Q VQ LK NN +L + +F K+ VL YQ
Sbjct: 169 VAKIYLEYQ----VQ-LKKNNALDFDDLIVKTVELFKKYPDVLDYYQ 210
>ref|YP_002314615.1| ATP-dependent DNA helicase PcrA [Anoxybacillus flavithermus WK1]
gi|501569537|ref|WP_012573967.1| ATP-dependent DNA
helicase PcrA [Anoxybacillus flavithermus]
gi|212559575|gb|ACJ32630.1| ATP-dependent DNA helicase
PcrA [Anoxybacillus flavithermus WK1]
Length = 726
Score = 89.0 bits (219), Expect = 1e-15
Identities = 50/131 (38%), Positives = 79/131 (60%), Gaps = 1/131 (0%)
Frame = -1
Query: 647 LTEAQLSAIYAPLEKPLLILASAGSGKTLVLCHRILFLIS-KGISAKDILALTFTRRAGQ 471
L E Q A+ E PLLI+A AGSGKT VL HRI +L++ KG++ +ILA+TFT +A +
Sbjct: 17 LNEKQKEAVKTT-EGPLLIMAGAGSGKTRVLTHRIAYLMAEKGVAPWNILAITFTNKAAR 75
Query: 470 DLLQKLRHLVSSQHYLCEGIDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKM 291
++ +++ +V Q DI + TFHS C+ +LR + G+ NF + P
Sbjct: 76 EMKERVERIVGKQ----------AEDIWISTFHSMCVRILRRDIDRIGIHANFSILDPTD 125
Query: 290 QLDLLENVVED 258
QL +L+++++D
Sbjct: 126 QLSVLKHILKD 136
>ref|YP_004886959.1| ATP-dependent DNA helicase PcrA [Tetragenococcus halophilus NBRC
12172] gi|503890852|ref|WP_014124846.1| ATP-dependent
DNA helicase PcrA [Tetragenococcus halophilus]
gi|348601749|dbj|BAK94795.1| ATP-dependent DNA helicase
PcrA [Tetragenococcus halophilus NBRC 12172]
Length = 749
Score = 88.2 bits (217), Expect = 2e-15
Identities = 71/226 (31%), Positives = 115/226 (50%), Gaps = 10/226 (4%)
Frame = -1
Query: 650 NLTEAQLSAIYAPLEKPLLILASAGSGKTLVLCHRILFLIS-KGISAKDILALTFTRRAG 474
N+ + Q AI E PLL++A AGSGKT VL HRI +LI K ++ ++LA+TFT +A
Sbjct: 10 NMNQKQEEAI-TTTEGPLLLMAGAGSGKTRVLTHRIAYLIEEKSVNPWNVLAITFTNKAA 68
Query: 473 QDLLQKLRHLVSSQHYLCEGIDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPK 294
+++ ++++ L +D + V TFHS C+ +LR + G S NF + P
Sbjct: 69 KEMKERVKAL----------LDVQAEGVWVSTFHSMCVRILRRDVDLIGYSQNFTIVDPA 118
Query: 293 MQLDLLENVVEDWYAQRKTQSLHGKSFQSK--LGDSNNYK------KESLLTSGNEKSFI 138
Q L++NV+ KT + K + + LG+ +N K +E T G+ I
Sbjct: 119 EQRTLMKNVL-------KTLDIDPKKYDPRGILGNISNAKNALLTPEEYQQTQGSYFEEI 171
Query: 137 KAKAFQFLQ-DLRNVQLLKANNDTTNTELDGRNDNVFSKWVLQNYQ 3
+ ++ Q +LR Q + ++ NT +N ++ VLQ YQ
Sbjct: 172 VGRCYEVYQKELRKNQSMDFDDLIMNTITLLKN----NEEVLQYYQ 213
>ref|YP_003995608.1| ATP-dependent DNA helicase PcrA [Halanaerobium hydrogeniformans]
gi|503171664|ref|WP_013406325.1| ATP-dependent DNA
helicase PcrA [Halanaerobium hydrogeniformans]
gi|311904813|gb|ADQ15254.1| ATP-dependent DNA helicase
PcrA [Halanaerobium hydrogeniformans]
Length = 715
Score = 88.2 bits (217), Expect = 2e-15
Identities = 70/204 (34%), Positives = 108/204 (52%), Gaps = 4/204 (1%)
Frame = -1
Query: 602 PLLILASAGSGKTLVLCHRILFLIS-KGISAKDILALTFTRRAGQDLLQKLRHLVSSQHY 426
PLL+LA AGSGKT VL RI +LI +G+S +ILA+TFT +A +++ ++ +V
Sbjct: 24 PLLLLAGAGSGKTRVLTRRIAYLIKQRGVSPYNILAVTFTNKAAEEMKNRVAKMV----- 78
Query: 425 LCEGIDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVV-EDWYA 249
+G+D + + TFHSFC+ +LR E G NFV+F Q L++ ++ E+
Sbjct: 79 --DGVD---KSLLISTFHSFCVRILRREAEKLGYQSNFVIFDSIDQRKLIKKILKEENID 133
Query: 248 QRKTQSLHGKSFQSKLGDSNNYKKESLLTSGNEKSFIKAKAFQFLQDLRNVQLLKANNDT 69
+KT+ S +K+ ++ N K + SF AK L + Q LKANN
Sbjct: 134 PKKTKP---SSVLNKISNAKNELKSPEQFRNSAGSFY-AKNIADLYEKYQKQ-LKANNAV 188
Query: 68 TNTELDGRNDNVFSKW--VLQNYQ 3
+L +F K+ VL++YQ
Sbjct: 189 DFDDLIQLTVKLFKKYPKVLEHYQ 212
>ref|WP_019107074.1| hypothetical protein [Peptoniphilus senegalensis]
Length = 976
Score = 87.8 bits (216), Expect = 3e-15
Identities = 49/153 (32%), Positives = 87/153 (56%)
Frame = -1
Query: 647 LTEAQLSAIYAPLEKPLLILASAGSGKTLVLCHRILFLISKGISAKDILALTFTRRAGQD 468
L + QL A+ + ++K + ++A AG+GKT VL R + ++ K K+ILA+TFT++A Q+
Sbjct: 3 LNKIQLEAV-SSIDKDVTLMAGAGTGKTRVLTKRFINIVKKFKEPKNILAITFTKKAAQE 61
Query: 467 LLQKLRHLVSSQHYLCEGIDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQ 288
+L ++ S+ + E IDF+ D+ + T HSF L +++ + G++PNF + +
Sbjct: 62 MLGRI-----SKELVDENIDFEEKDLNIMTIHSFALEIVKDYAYELGINPNFTILDDSKE 116
Query: 287 LDLLENVVEDWYAQRKTQSLHGKSFQSKLGDSN 189
++LL+ V SL + F+ L D N
Sbjct: 117 IELLDKAV-----SLSLNSLEDEKFKKYLIDFN 144
>ref|WP_010753869.1| ATP-dependent DNA helicase PcrA [Enterococcus asini]
gi|486853684|gb|EOH86764.1| ATP-dependent DNA helicase
PcrA [Enterococcus asini ATCC 700915]
gi|508184046|gb|EOT58313.1| ATP-dependent DNA helicase
PcrA [Enterococcus asini ATCC 700915]
Length = 747
Score = 87.8 bits (216), Expect = 3e-15
Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Frame = -1
Query: 608 EKPLLILASAGSGKTLVLCHRILFLIS-KGISAKDILALTFTRRAGQDLLQKLRHLVSSQ 432
E PLLI+A AGSGKT VL HRI +LI KG++ +ILA+TFT +A +++ +++ +L+ +
Sbjct: 22 EGPLLIMAGAGSGKTRVLTHRIAYLIEEKGVNPWNILAITFTNKAAKEMKERVINLMEAG 81
Query: 431 HYLCEGIDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWY 252
D+ + TFHS C+ +LR ++ G S NF + QL L++ VV
Sbjct: 82 G----------EDVWISTFHSMCVRILRRDVDHIGYSKNFTIIDSSEQLTLMKRVV---- 127
Query: 251 AQRKTQSLHGKSF--QSKLGDSNNYKKESL 168
K Q++ K + +S LG +N K E L
Sbjct: 128 ---KEQNIDPKKYDPRSILGAISNAKNELL 154
>ref|YP_003369305.1| UvrD/REP helicase [Pirellula staleyi DSM 6068]
gi|502673939|ref|WP_012909710.1| ATPase AAA [Pirellula
staleyi] gi|283437003|gb|ADB15445.1| UvrD/REP helicase
[Pirellula staleyi DSM 6068]
Length = 800
Score = 87.8 bits (216), Expect = 3e-15
Identities = 49/135 (36%), Positives = 77/135 (57%)
Frame = -1
Query: 662 PECPNLTEAQLSAIYAPLEKPLLILASAGSGKTLVLCHRILFLISKGISAKDILALTFTR 483
P +LT+AQ +A+ +E PLLILA GSGKT V+ HR+ ++++ GI A+ ILALTFT
Sbjct: 21 PLLDSLTDAQRAAV-CHIEGPLLILAGPGSGKTRVVTHRVAWMLASGIPARQILALTFTN 79
Query: 482 RAGQDLLQKLRHLVSSQHYLCEGIDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVF 303
+A ++ +L L Q + +GTFH FC +LR++ E GL NF ++
Sbjct: 80 KAADEMRGRLERLAPRQ------------AVWMGTFHRFCARMLRSYAELVGLRENFSIY 127
Query: 302 TPKMQLDLLENVVED 258
+L+ +++
Sbjct: 128 DTDDSRKILQIALDE 142
>ref|YP_002353285.1| UvrD/REP helicase [Dictyoglomus turgidum DSM 6724]
gi|501579419|ref|WP_012583749.1| ATP-dependent DNA
helicase PcrA [Dictyoglomus turgidum]
gi|217336878|gb|ACK42671.1| UvrD/REP helicase
[Dictyoglomus turgidum DSM 6724]
Length = 625
Score = 87.8 bits (216), Expect = 3e-15
Identities = 51/152 (33%), Positives = 92/152 (60%), Gaps = 1/152 (0%)
Frame = -1
Query: 647 LTEAQLSAIYAPLEKPLLILASAGSGKTLVLCHRILFLISKGISA-KDILALTFTRRAGQ 471
L + QL A++ +E+P+LILA AGSGKT V+ ++I +LI + ++I+ALTFT +A +
Sbjct: 7 LNKEQLEAVFE-IERPVLILAGAGSGKTRVITYKIAYLIKNNFAKPENIVALTFTNKAAE 65
Query: 470 DLLQKLRHLVSSQHYLCEGIDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKM 291
++ +++ +L+ ++ V+ + GTFH F L +L+ F Y L PNFV++
Sbjct: 66 EMKRRIDNLLGVKN---------VDKVWAGTFHGFGLYLLKNFGRYWNLCPNFVIYDEND 116
Query: 290 QLDLLENVVEDWYAQRKTQSLHGKSFQSKLGD 195
Q DL++++++D ++ + K S+L D
Sbjct: 117 QEDLIKDILKDLNRSKEYSARDIKEKISRLKD 148
>gb|EUZ67964.1| ATP-dependent DNA helicase pcrA [Staphylococcus sp. M0480]
Length = 730
Score = 87.4 bits (215), Expect = 3e-15
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 3/162 (1%)
Frame = -1
Query: 650 NLTEAQLSAIYAPLEKPLLILASAGSGKTLVLCHRILFLI-SKGISAKDILALTFTRRAG 474
N+ + Q A+ E PLLI+A AGSGKT VL HRI +L+ K +S +ILA+TFT +A
Sbjct: 7 NMNKEQSEAVRTT-EGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNILAITFTNKAA 65
Query: 473 QDLLQKLRHLVSSQHYLCEGIDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPK 294
+++ +++ HLV + + I + TFHS C+ +LR + G+ NF + P
Sbjct: 66 KEMKERVEHLVGEEAQV----------IWMSTFHSMCVKILRRDADRIGIERNFTIIDPT 115
Query: 293 MQLDLLENVVEDWYAQRKTQSLHGKSFQSK--LGDSNNYKKE 174
Q ++++V+ K +++ K F+ + +G +N K E
Sbjct: 116 DQKSVIKDVL-------KNENIDSKRFEPRMFIGAISNLKNE 150
>ref|WP_022757523.1| ATP-dependent DNA helicase PcrA [Butyrivibrio fibrisolvens]
Length = 862
Score = 87.4 bits (215), Expect = 3e-15
Identities = 67/206 (32%), Positives = 109/206 (52%), Gaps = 4/206 (1%)
Frame = -1
Query: 608 EKPLLILASAGSGKTLVLCHRILFLISK-GISAKDILALTFTRRAGQDLLQKLRHLVSSQ 432
E P+LILA AGSGKT VL HR+ +LI + G++ +I+A+TFT +A ++ +++ +V
Sbjct: 19 EGPVLILAGAGSGKTRVLTHRVAYLIDECGVNPWNIMAITFTNKAAGEMRERVDKIVG-- 76
Query: 431 HYLCEGIDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWY 252
F I V TFHS C+ +LR + + G S NF ++ +L+N+V+ +
Sbjct: 77 --------FGSESIWVTTFHSTCVRILRRYADRLGYSNNFTIYDSDDSKSVLKNIVKQYN 128
Query: 251 AQRKTQSLHG-KSFQSKLGDSNNYKKESLLTSGNEKSFIK-AKAFQFLQ-DLRNVQLLKA 81
+ + L ++ SK D+ L+SGN+ K AKA+Q Q L+ +
Sbjct: 129 LETRDLKLRQIQNTISKCKDNLVTANSYTLSSGNDFQKQKIAKAYQEYQISLKKNNAMDF 188
Query: 80 NNDTTNTELDGRNDNVFSKWVLQNYQ 3
++ NT + R +K VL+NYQ
Sbjct: 189 DDLIMNTVILFRE----NKDVLENYQ 210
>ref|WP_022755046.1| ATP-dependent DNA helicase PcrA [Butyrivibrio fibrisolvens]
Length = 862
Score = 87.4 bits (215), Expect = 3e-15
Identities = 67/206 (32%), Positives = 109/206 (52%), Gaps = 4/206 (1%)
Frame = -1
Query: 608 EKPLLILASAGSGKTLVLCHRILFLISK-GISAKDILALTFTRRAGQDLLQKLRHLVSSQ 432
E P+LILA AGSGKT VL HR+ +LI + G++ +I+A+TFT +A ++ +++ +V
Sbjct: 19 EGPVLILAGAGSGKTRVLTHRVAYLIDECGVNPWNIMAITFTNKAAGEMRERVDKIVG-- 76
Query: 431 HYLCEGIDFDVNDIRVGTFHSFCLSVLRAFPEYAGLSPNFVVFTPKMQLDLLENVVEDWY 252
F I V TFHS C+ +LR + + G S NF ++ +L+N+V+ +
Sbjct: 77 --------FGSESIWVTTFHSTCVRILRRYADRLGYSNNFTIYDSDDSKSVLKNIVKQYN 128
Query: 251 AQRKTQSLHG-KSFQSKLGDSNNYKKESLLTSGNEKSFIK-AKAFQFLQ-DLRNVQLLKA 81
+ + L ++ SK D+ L+SGN+ K AKA+Q Q L+ +
Sbjct: 129 LETRDLKLRQIQNTISKCKDNLVTANSYTLSSGNDFQKQKIAKAYQEYQISLKKNNAMDF 188
Query: 80 NNDTTNTELDGRNDNVFSKWVLQNYQ 3
++ NT + R +K VL+NYQ
Sbjct: 189 DDLIMNTVILFRE----NKDVLENYQ 210