BLASTX nr result

ID: Ephedra27_contig00015067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00015067
         (1402 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006852632.1| hypothetical protein AMTR_s00021p00235990 [A...    58   8e-06

>ref|XP_006852632.1| hypothetical protein AMTR_s00021p00235990 [Amborella trichopoda]
           gi|548856243|gb|ERN14099.1| hypothetical protein
           AMTR_s00021p00235990 [Amborella trichopoda]
          Length = 1147

 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 1/158 (0%)
 Frame = +1

Query: 340 ELVAFQAQYHKEMQTWGFGNGPIFLITE-RENDKYNVSIDEKELRNRFPDENELVFLGDI 516
           EL  + +Q  K+ + WG G+G IF I E  + +   VS++E E+ +R   E       DI
Sbjct: 163 ELDDWVSQLRKKSEYWGPGSGTIFTIYEDLDGNVERVSVNEDEVIDRSVGE-------DI 215

Query: 517 SKTENGASLFVQKYAEAMAIVSDIEAGNLHPPRHSFVFKVVPSESSQQQSAVSNPVMSVI 696
           S  +       +K + A  +  +IEAG+   PR+S + + V  +  +      +    +I
Sbjct: 216 SNVD-------KKISHAKLLAREIEAGSYKLPRNSSIARFV-IQDDRNSHLTGHRSGDII 267

Query: 697 GKIPPSIKVSFIGFGIVVAASVFFWGVLKYFKGELSEK 810
            K     K+SFIGF +++ + V FW V K F  E SEK
Sbjct: 268 KKGHSLSKLSFIGFTVIIISFV-FWEVKKLFISEDSEK 304


Top