BLASTX nr result

ID: Ephedra27_contig00015001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00015001
         (537 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                              66   6e-09
gb|AAB92505.1| similar to resistance gene; region between conser...    55   8e-06

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 43/139 (30%), Positives = 72/139 (51%)
 Frame = -1

Query: 420 GQQELQTHFSSNSCFIFVDNVVDSCQLDGLFPDKIPTNHTLRILVTSRDVEVRKHIPFRT 241
           GQ+EL       S FI++DN +   +L  L P+ +     +R+L+T+RD+ VRK  P +T
Sbjct: 393 GQRELSRVLEDVSAFIYIDNALGERELGQLLPEDLSKAKKVRLLITARDLNVRKSCPLKT 452

Query: 240 NHIKEYHIERLPDEPSLVLLKKSADMTDEIEQFRGETQKLEQVAKLCYGIPLLLIQAGKD 61
              KEY ++ +    +  LLK   +M   +E      Q +  + K C GIPL+L    + 
Sbjct: 453 AP-KEYRMKAISSMEATNLLK--MEMFGHMETILYSYQ-VNHIIKKCGGIPLMLKLVARA 508

Query: 60  LKFHIKEYYYNEILKRLEE 4
           L+F   +   +++L  LE+
Sbjct: 509 LRFAKDKEEVDQVLDELEK 527


>gb|AAB92505.1| similar to resistance gene; region between conserved kinase-2 and
           P-Loop domains [Pinus radiata]
          Length = 264

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
 Frame = -1

Query: 501 ETQVKDLQSRLISGLKGREIKVENILGGQQELQTHFSSNSCFIFVDNVVDSCQLDGLF-P 325
           +T ++ LQ++L++ L   + K+E++  G + L+TH SS    + +D+V    QLD L  P
Sbjct: 14  KTSLQSLQNKLLNSLIQLDEKIESVSEGIKLLKTHLSSCEALVILDDVDHVNQLDALLRP 73

Query: 324 DKIPTNHTLRILVTSRDVEVRKHIPFRTNHIKEYHIERLPDEPSLVLLKKSADMTDEIEQ 145
            +   +    IL+TSRD +V      R      Y +  L  + S  L  + A    +   
Sbjct: 74  IRTVLHPRSLILITSRDKDVLTR--SRVEESSIYKLTGLSTQQSQELFCRHA--FTQGHP 129

Query: 144 FRGETQKLEQVAKLCYGIPLLLIQAGKDLKFHIKEYYYNEILKRLEE 4
             G    +E+  K CYG+PL L   G  L +   + ++ + L RLE+
Sbjct: 130 LPGFEDLVEKFLKACYGLPLSLKVFGA-LVYGNDKSFWEDQLDRLEQ 175


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