BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00014894
         (609 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24412.1| unknown [Picea sitchensis]                              97   3e-18
ref|XP_002309038.2| hypothetical protein POPTR_0006s08160g [Popu...    62   2e-07
ref|XP_002514498.1| skip-2, putative [Ricinus communis] gi|22354...    62   2e-07
ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cuc...    57   5e-06

>gb|ABK24412.1| unknown [Picea sitchensis]
          Length = 498

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 53/94 (56%), Positives = 68/94 (72%)
 Frame = -2

Query: 608 GLERLALGCPNLIKLKVKRCKHVTLRSVFRLQRCRSSLLVSLDHGGAHASTEDENISSLV 429
           GL  +A GCP+LIKLKVKRCK VT +SV ++Q  R SL+V++D GG+  + ED+   SL 
Sbjct: 395 GLVTIAGGCPSLIKLKVKRCKGVTSKSVCQVQTKRGSLIVAVD-GGSQTAGEDDQGRSLQ 453

Query: 428 SDENRVIREPTHVLCGSRTPLIKSRWGVVASNFL 327
             ++RVIRE THVLCGSR  LIK++ G  ASN L
Sbjct: 454 LGDDRVIRESTHVLCGSRGHLIKTKLGTAASNLL 487


>ref|XP_002309038.2| hypothetical protein POPTR_0006s08160g [Populus trichocarpa]
           gi|550335763|gb|EEE92561.2| hypothetical protein
           POPTR_0006s08160g [Populus trichocarpa]
          Length = 572

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 41/102 (40%), Positives = 51/102 (50%), Gaps = 20/102 (19%)
 Frame = -2

Query: 608 GLERLALGCPNLIKLKVKRCKHVTLRSVFRLQRCRSSLLVSLDHGG-----------AHA 462
           G+E +  GCPNL+KLKVKRCK VT   V RL+  RSSL+VSLD G            A A
Sbjct: 448 GIEAVGRGCPNLVKLKVKRCKGVTQAMVSRLRFQRSSLVVSLDAGSMLFDSGGISLLASA 507

Query: 461 STEDENISSLVSDENRVIRE---------PTHVLCGSRTPLI 363
             E+E  ++         R           THV+C SR  L+
Sbjct: 508 VNEEEQGTATAMTNTNSTRSAAAAATTVAATHVICSSRGALL 549


>ref|XP_002514498.1| skip-2, putative [Ricinus communis] gi|223546397|gb|EEF47898.1|
           skip-2, putative [Ricinus communis]
          Length = 511

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 15/100 (15%)
 Frame = -2

Query: 608 GLERLALGCPNLIKLKVKRCKHVTLRSVFRLQRCRSSLLVSLDHG-----GAHASTEDEN 444
           G+E +  GCPNL+KLKVKRC+ ++  SV +L+  R+S++VS+D G     G   +   E 
Sbjct: 399 GIEAIGGGCPNLVKLKVKRCRGISEASVRKLRMQRTSVVVSVDTGSMVFSGQRMTITQEE 458

Query: 443 ISSLVSDENRVIREP---------THVLCGSRTPL-IKSR 354
             +    +NR IR P          HV+C SR+ L ++SR
Sbjct: 459 EEAEQQQQNRSIRTPNTAAATTAAAHVVCSSRSALFLRSR 498


>ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus]
           gi|449515093|ref|XP_004164584.1| PREDICTED: F-box
           protein At1g47056-like [Cucumis sativus]
          Length = 535

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
 Frame = -2

Query: 608 GLERLALGCPNLIKLKVKRCKHVTLRSVFRLQRCRSSLLVSLDHGGAH---ASTEDENIS 438
           G+E LA GCPNL+K+KVK+C+ VT      L+  R SL V+LD G      AS  +  I 
Sbjct: 416 GMEALAEGCPNLVKVKVKKCRGVTPEGADSLRLSRGSLAVNLDSGEPEHPDASASEGGIQ 475

Query: 437 SLVSD----ENRVIREPTHVLCGSRTPLIKSRWGVVASNFL 327
             V D     N+V+          R+  +KSR G++A   L
Sbjct: 476 DNVVDFHPIPNQVVPPTIASSSAGRSSSLKSRLGLLAGRGL 516