BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00014807
         (541 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS54259.1| hypothetical protein TRIUR3_07982 [Triticum urartu]     57   2e-06
ref|NP_200229.1| plastid transcriptionally active protein 15 [Ar...    57   3e-06
gb|EMT05421.1| hypothetical protein F775_05628 [Aegilops tauschii]     57   3e-06
gb|AAM65747.1| unknown [Arabidopsis thaliana]                          57   3e-06
ref|XP_006347515.1| PREDICTED: uncharacterized protein LOC102588...    56   6e-06
ref|XP_004235022.1| PREDICTED: uncharacterized protein LOC101249...    56   6e-06
gb|EOY06461.1| Mitochondrial transcription termination factor fa...    55   8e-06

>gb|EMS54259.1| hypothetical protein TRIUR3_07982 [Triticum urartu]
          Length = 423

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   DLAKTLSRAPRTLSAKYLEGNIAFYKAVYLDNANLVKALKINPSFLARTPQASSVNERTE 181
           ++A+  S APR+  ++ +   + +Y  ++  + +L++ LK    FL+  P+   V    E
Sbjct: 126 EIARVASLAPRSFRSRSVVSGLEYYLPLFSSSESLLRGLKKYKYFLSSDPERV-VKPNIE 184

Query: 182 LLQQYGFGNDSINYIMRRAPLFLSAPIHKMQSHLEFFRNIGFKEPNMTFANALSITVQHS 361
           LL++ G G   I  +    P  LSA   ++Q  L   + +G    +  F +AL      S
Sbjct: 185 LLRECGIGTSDIAKLCLAVPWLLSAKPERVQVMLACAKRLGVPRGSGMFRHALKAVESLS 244

Query: 362 SEMLHQKYRHF-VALGLSEHEVKEMVLKCPSVLKNSCDKVQSIADYLQSK 508
            E L  K  +       S+ EV   + K P +L  S   +QS +++L S+
Sbjct: 245 EEKLAAKVEYLRNTFRWSDAEVGIALRKAPLMLTKSNQTMQSKSEFLISE 294


>ref|NP_200229.1| plastid transcriptionally active protein 15 [Arabidopsis thaliana]
           gi|10178167|dbj|BAB11580.1| unnamed protein product
           [Arabidopsis thaliana] gi|19698993|gb|AAL91232.1|
           unknown protein [Arabidopsis thaliana]
           gi|23198092|gb|AAN15573.1| unknown protein [Arabidopsis
           thaliana] gi|332009080|gb|AED96463.1| transcriptionally
           active protein 15 [Arabidopsis thaliana]
          Length = 500

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 3/164 (1%)
 Frame = +2

Query: 17  LSRAPRTLS--AKYLEGNIAFYKAVY-LDNANLVKALKINPSFLARTPQASSVNERTELL 187
           L R P  LS   +++ G + F K+   L +  + K + + P+ ++ T +   +  R E L
Sbjct: 272 LRRLPAILSYSVEHMNGQVEFLKSFAGLTSEQVFKIVHVFPNVIS-TSKERKLRPRIEFL 330

Query: 188 QQYGFGNDSINYIMRRAPLFLSAPIHKMQSHLEFFRNIGFKEPNMTFANALSITVQHSSE 367
           ++ GF +  +   + +APL L+   + +   L F   IG+K      A A+    + SS+
Sbjct: 331 KECGFDSPGMFKFLSKAPLILALSENNLSHKLGFLVKIGYKHRTKELAFAMGAVTRTSSD 390

Query: 368 MLHQKYRHFVALGLSEHEVKEMVLKCPSVLKNSCDKVQSIADYL 499
            + +    +++ GLS  ++  M  K P VL+ +   ++   +YL
Sbjct: 391 NMQRVIGLYLSYGLSFEDILAMSTKHPQVLQYNYTSLEEKLEYL 434


>gb|EMT05421.1| hypothetical protein F775_05628 [Aegilops tauschii]
          Length = 356

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
 Frame = +2

Query: 2   DLAKTLSRAPRTLSAKYLEGNIAFYKAVYLDNANLVKALKINPSFLARTPQASSVNERTE 181
           ++A+  S APR+  ++ +   + +Y  ++  + +L++ LK    FL+  P+   V    E
Sbjct: 92  EIARVASLAPRSFRSRSVVSGLEYYLPLFSSSESLLRGLKKYKYFLSSDPERV-VKPNIE 150

Query: 182 LLQQYGFGNDSINYIMRRAPLFLSAPIHKMQSHLEFFRNIGFKEPNMTFANALSITVQHS 361
           LL++ G G   I  +    P  LSA   ++Q  L     +G    +  F +AL      S
Sbjct: 151 LLRECGLGTSDIAKLCLAVPWLLSAKPERVQVMLACVERLGVPRRSGMFRHALKAVESLS 210

Query: 362 SEMLHQKYRHF-VALGLSEHEVKEMVLKCPSVLKNSCDKVQSIADYLQSK 508
            E L  K  +       S+ EV   + K P +L  S   +QS +++L S+
Sbjct: 211 EEKLAAKVEYLRNTFRWSDAEVGIALRKAPLMLTKSNQTLQSKSEFLISE 260


>gb|AAM65747.1| unknown [Arabidopsis thaliana]
          Length = 500

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 3/164 (1%)
 Frame = +2

Query: 17  LSRAPRTLS--AKYLEGNIAFYKAVY-LDNANLVKALKINPSFLARTPQASSVNERTELL 187
           L R P  LS   +++ G + F K+   L +  + K + + P+ ++ T +   +  R E L
Sbjct: 272 LRRLPAILSYSVEHMNGQVEFLKSFAGLTSEQVFKIVHVFPNVIS-TSKERKLRPRIEFL 330

Query: 188 QQYGFGNDSINYIMRRAPLFLSAPIHKMQSHLEFFRNIGFKEPNMTFANALSITVQHSSE 367
           ++ GF +  +   + +APL L+   + +   L F   IG+K      A A+    + SS+
Sbjct: 331 KECGFDSPGMFKFLSKAPLILALSENNLSHKLGFLVKIGYKHRTKELAFAMGAVTRTSSD 390

Query: 368 MLHQKYRHFVALGLSEHEVKEMVLKCPSVLKNSCDKVQSIADYL 499
            + +    +++ GLS  ++  M  K P VL+ +   ++   +YL
Sbjct: 391 NMQRVIGLYLSYGLSFEDILAMSTKHPQVLQYNYTSLEEKLEYL 434


>ref|XP_006347515.1| PREDICTED: uncharacterized protein LOC102588461 [Solanum tuberosum]
          Length = 518

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/170 (24%), Positives = 84/170 (49%), Gaps = 3/170 (1%)
 Frame = +2

Query: 41  SAKYLEGNIAFYKAVY-LDNANLVKALKINPSFLARTPQASSVNERTELLQQYGFGNDSI 217
           S  +L+ ++ F K+   L    + + + + P+  + + +   ++ R + L+Q G  +  I
Sbjct: 290 SVDHLKDHVEFLKSYAGLSEEEIFRIVLVYPNMFSAS-RKRKLHPRIDFLKQCGLSSHDI 348

Query: 218 NYIMRRAPLFLSAPIH-KMQSHLEFFRNIGFKEPNMTFANALSITVQHSSEMLHQKYRHF 394
              + +APLFLS      +   L F   IG+K+     A A+    + S + + +    F
Sbjct: 349 FRFLIKAPLFLSLSFEGNLAYKLVFLVKIGYKKNTKELAMAMGAVTRTSCKNMQEVIGVF 408

Query: 395 VALGLSEHEVKEMVLKCPSVLKNSCDKVQSIADYL-QSKRVKLGVLIAYP 541
           +  GL+  ++ EM +K P VL+ + + ++   DYL +    ++G L+A+P
Sbjct: 409 LNYGLTFDDILEMSMKHPQVLQYNHESLEEKMDYLVEEMGREVGELLAFP 458


>ref|XP_004235022.1| PREDICTED: uncharacterized protein LOC101249713 [Solanum
           lycopersicum]
          Length = 514

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/170 (24%), Positives = 84/170 (49%), Gaps = 3/170 (1%)
 Frame = +2

Query: 41  SAKYLEGNIAFYKAVY-LDNANLVKALKINPSFLARTPQASSVNERTELLQQYGFGNDSI 217
           S  +L+ ++ F K+   L    + + + + P+  + + +   ++ R + L+Q G  +  I
Sbjct: 286 SVDHLKDHVEFLKSYAGLSEEEIFRIVLVYPNMFSAS-RKRKLHPRIDFLKQCGLSSHDI 344

Query: 218 NYIMRRAPLFLSAPIH-KMQSHLEFFRNIGFKEPNMTFANALSITVQHSSEMLHQKYRHF 394
              + +APLFLS      +   L F   IG+K+     A A+    + S + + +    F
Sbjct: 345 FRFLIKAPLFLSLSFEGNLAYKLVFLVKIGYKKNTKELAMAMGAVTRTSCKNMQEVIGVF 404

Query: 395 VALGLSEHEVKEMVLKCPSVLKNSCDKVQSIADYL-QSKRVKLGVLIAYP 541
           +  GL+  ++ EM +K P VL+ + + ++   DYL +    ++G L+A+P
Sbjct: 405 LNYGLTFDDILEMSMKHPQVLQYNHESLEEKMDYLVEEMGREVGELLAFP 454


>gb|EOY06461.1| Mitochondrial transcription termination factor family protein,
           putative isoform 1 [Theobroma cacao]
           gi|508714565|gb|EOY06462.1| Mitochondrial transcription
           termination factor family protein, putative isoform 1
           [Theobroma cacao]
          Length = 395

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 5/185 (2%)
 Frame = +2

Query: 2   DLAKTLSRAPRTLSA---KYLEGNIAFYKAVYLDNANLVKALKINPSFLARTPQASSVNE 172
           DLA  +S+ P  L+    K +  +    + + L + N++ A+K+ P   +    A  +  
Sbjct: 133 DLATFVSKYPTILAISLEKQIIPSFNLLRNMLLSDENVINAIKLYPRIFSYDFNAY-ILP 191

Query: 173 RTELLQQYGFGNDSINYIMRRAP-LFLSAPIHKMQSHLEFFRNIGFKEPNMTFANALSIT 349
              +L+  G    +I  ++   P  F  AP+ K++ + E  + +GF    + +  A+   
Sbjct: 192 NINVLRDTGVPEYNIVKLLHWLPKAFFRAPV-KVKENAEKLKGMGFNPERVIYLVAVYAL 250

Query: 350 VQHSSEMLHQKYRHFVALGLSEHEVKEMVLKCPSVLKNSCDKVQSIADYLQSK-RVKLGV 526
              S   L +K+  F   G SE EV E   + P ++  S DK+ ++ D+L SK R ++  
Sbjct: 251 GSLSKSTLEKKFDTFKKCGWSEEEVLEAFRRYPLIMTISEDKIMAVMDFLMSKMRFEVSS 310

Query: 527 LIAYP 541
           L  YP
Sbjct: 311 LAKYP 315