BLASTX nr result
ID: Ephedra27_contig00014571
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00014571
(352 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003557154.1| PREDICTED: chaperonin 60 subunit beta 1, chl... 73 5e-11
gb|ABK24483.1| unknown [Picea sitchensis] 72 8e-11
gb|EMT19476.1| RuBisCO large subunit-binding protein subunit bet... 71 1e-10
gb|EMT05406.1| RuBisCO large subunit-binding protein subunit bet... 71 1e-10
gb|EMS68298.1| RuBisCO large subunit-binding protein subunit bet... 71 1e-10
gb|EMS63178.1| RuBisCO large subunit-binding protein subunit bet... 71 1e-10
ref|XP_004964341.1| PREDICTED: chaperonin 60 subunit beta 2, chl... 71 2e-10
ref|XP_004964340.1| PREDICTED: chaperonin 60 subunit beta 2, chl... 71 2e-10
gb|AFW86142.1| putative TCP-1/cpn60 chaperonin family protein [Z... 71 2e-10
gb|AFW75267.1| putative TCP-1/cpn60 chaperonin family protein [Z... 71 2e-10
gb|AFW75266.1| putative TCP-1/cpn60 chaperonin family protein [Z... 71 2e-10
ref|XP_002437709.1| hypothetical protein SORBIDRAFT_10g001120 [S... 71 2e-10
gb|ACN34709.1| unknown [Zea mays] gi|413953489|gb|AFW86138.1| pu... 71 2e-10
gb|ACN28096.1| unknown [Zea mays] gi|223948483|gb|ACN28325.1| un... 71 2e-10
ref|XP_006392634.1| hypothetical protein EUTSA_v10011330mg [Eutr... 70 3e-10
gb|AFW66837.1| putative TCP-1/cpn60 chaperonin family protein is... 70 3e-10
ref|XP_003574065.1| PREDICTED: ruBisCO large subunit-binding pro... 70 3e-10
gb|ACG36615.1| ruBisCO large subunit-binding protein subunit bet... 70 3e-10
ref|NP_001146890.1| ruBisCO large subunit-binding protein subuni... 70 3e-10
ref|NP_175945.1| chaperonin 60 subunit beta 1 [Arabidopsis thali... 70 4e-10
>ref|XP_003557154.1| PREDICTED: chaperonin 60 subunit beta 1, chloroplastic-like
[Brachypodium distachyon]
Length = 599
Score = 72.8 bits (177), Expect = 5e-11
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = +1
Query: 211 VRPARRSFVTTRAAKELHFNKDGSATKKLQAGVNKLADLVGVTLGPK 351
VR R+ +AAKEL+FNKDGSATKKLQAGVNKLADLVGVTLGPK
Sbjct: 42 VRLQRKCNFRVKAAKELYFNKDGSATKKLQAGVNKLADLVGVTLGPK 88
>gb|ABK24483.1| unknown [Picea sitchensis]
Length = 617
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/44 (86%), Positives = 39/44 (88%), Gaps = 1/44 (2%)
Frame = +1
Query: 223 RRSFVTTRA-AKELHFNKDGSATKKLQAGVNKLADLVGVTLGPK 351
R V TRA AKEL+FNKDGSATKKLQAGVNKLADLVGVTLGPK
Sbjct: 63 REQVVNTRAMAKELYFNKDGSATKKLQAGVNKLADLVGVTLGPK 106
>gb|EMT19476.1| RuBisCO large subunit-binding protein subunit beta, chloroplastic
[Aegilops tauschii]
Length = 654
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/46 (76%), Positives = 37/46 (80%)
Frame = +1
Query: 214 RPARRSFVTTRAAKELHFNKDGSATKKLQAGVNKLADLVGVTLGPK 351
RP R+ AAKEL+FNKDGSA KKLQ GVNKLADLVGVTLGPK
Sbjct: 42 RPGRKCSFRVNAAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPK 87
>gb|EMT05406.1| RuBisCO large subunit-binding protein subunit beta, chloroplastic
[Aegilops tauschii]
Length = 932
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = +1
Query: 211 VRPARRSFVTTRAAKELHFNKDGSATKKLQAGVNKLADLVGVTLGPK 351
VR R+ +AAKEL+FNKDGSATKKLQ GVNKLADLVGVTLGPK
Sbjct: 375 VRLQRKCNFRVKAAKELYFNKDGSATKKLQVGVNKLADLVGVTLGPK 421
>gb|EMS68298.1| RuBisCO large subunit-binding protein subunit beta, chloroplastic
[Triticum urartu]
Length = 776
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = +1
Query: 211 VRPARRSFVTTRAAKELHFNKDGSATKKLQAGVNKLADLVGVTLGPK 351
VR R+ +AAKEL+FNKDGSATKKLQ GVNKLADLVGVTLGPK
Sbjct: 219 VRLQRKCNFRVKAAKELYFNKDGSATKKLQVGVNKLADLVGVTLGPK 265
>gb|EMS63178.1| RuBisCO large subunit-binding protein subunit beta, chloroplastic
[Triticum urartu]
Length = 561
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/46 (76%), Positives = 37/46 (80%)
Frame = +1
Query: 214 RPARRSFVTTRAAKELHFNKDGSATKKLQAGVNKLADLVGVTLGPK 351
RP R+ AAKEL+FNKDGSA KKLQ GVNKLADLVGVTLGPK
Sbjct: 18 RPGRKCSFRVNAAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPK 63
>ref|XP_004964341.1| PREDICTED: chaperonin 60 subunit beta 2, chloroplastic-like isoform
X2 [Setaria italica]
Length = 579
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = +1
Query: 211 VRPARRSFVTTRAAKELHFNKDGSATKKLQAGVNKLADLVGVTLGPK 351
VR RR+ +AAKEL+FNKDGSA KKLQ GVNKLADLVGVTLGPK
Sbjct: 22 VRLQRRANFRVKAAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPK 68
>ref|XP_004964340.1| PREDICTED: chaperonin 60 subunit beta 2, chloroplastic-like isoform
X1 [Setaria italica]
Length = 598
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = +1
Query: 211 VRPARRSFVTTRAAKELHFNKDGSATKKLQAGVNKLADLVGVTLGPK 351
VR RR+ +AAKEL+FNKDGSA KKLQ GVNKLADLVGVTLGPK
Sbjct: 41 VRLQRRANFRVKAAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPK 87
>gb|AFW86142.1| putative TCP-1/cpn60 chaperonin family protein [Zea mays]
Length = 388
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = +1
Query: 211 VRPARRSFVTTRAAKELHFNKDGSATKKLQAGVNKLADLVGVTLGPK 351
VR RR+ +AAKEL+FNKDGSA KKLQ GVNKLADLVGVTLGPK
Sbjct: 22 VRLQRRANFRVKAAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPK 68
>gb|AFW75267.1| putative TCP-1/cpn60 chaperonin family protein [Zea mays]
Length = 175
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/47 (78%), Positives = 38/47 (80%)
Frame = +1
Query: 211 VRPARRSFVTTRAAKELHFNKDGSATKKLQAGVNKLADLVGVTLGPK 351
VR RR RAAKEL+FNKDGSA KKLQ GVNKLADLVGVTLGPK
Sbjct: 66 VRLQRRVNFRVRAAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPK 112
>gb|AFW75266.1| putative TCP-1/cpn60 chaperonin family protein [Zea mays]
Length = 131
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/47 (78%), Positives = 38/47 (80%)
Frame = +1
Query: 211 VRPARRSFVTTRAAKELHFNKDGSATKKLQAGVNKLADLVGVTLGPK 351
VR RR RAAKEL+FNKDGSA KKLQ GVNKLADLVGVTLGPK
Sbjct: 22 VRLQRRVNFRVRAAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPK 68
>ref|XP_002437709.1| hypothetical protein SORBIDRAFT_10g001120 [Sorghum bicolor]
gi|241915932|gb|EER89076.1| hypothetical protein
SORBIDRAFT_10g001120 [Sorghum bicolor]
Length = 579
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = +1
Query: 211 VRPARRSFVTTRAAKELHFNKDGSATKKLQAGVNKLADLVGVTLGPK 351
VR RR+ +AAKEL+FNKDGSA KKLQ GVNKLADLVGVTLGPK
Sbjct: 22 VRLQRRANFRVKAAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPK 68
>gb|ACN34709.1| unknown [Zea mays] gi|413953489|gb|AFW86138.1| putative TCP-1/cpn60
chaperonin family protein [Zea mays]
Length = 600
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = +1
Query: 211 VRPARRSFVTTRAAKELHFNKDGSATKKLQAGVNKLADLVGVTLGPK 351
VR RR+ +AAKEL+FNKDGSA KKLQ GVNKLADLVGVTLGPK
Sbjct: 43 VRLQRRANFRVKAAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPK 89
>gb|ACN28096.1| unknown [Zea mays] gi|223948483|gb|ACN28325.1| unknown [Zea mays]
gi|413953490|gb|AFW86139.1| putative TCP-1/cpn60
chaperonin family protein isoform 1 [Zea mays]
gi|413953491|gb|AFW86140.1| putative TCP-1/cpn60
chaperonin family protein isoform 2 [Zea mays]
gi|413953492|gb|AFW86141.1| putative TCP-1/cpn60
chaperonin family protein isoform 3 [Zea mays]
Length = 579
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = +1
Query: 211 VRPARRSFVTTRAAKELHFNKDGSATKKLQAGVNKLADLVGVTLGPK 351
VR RR+ +AAKEL+FNKDGSA KKLQ GVNKLADLVGVTLGPK
Sbjct: 22 VRLQRRANFRVKAAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPK 68
>ref|XP_006392634.1| hypothetical protein EUTSA_v10011330mg [Eutrema salsugineum]
gi|557089212|gb|ESQ29920.1| hypothetical protein
EUTSA_v10011330mg [Eutrema salsugineum]
Length = 600
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/46 (76%), Positives = 37/46 (80%)
Frame = +1
Query: 214 RPARRSFVTTRAAKELHFNKDGSATKKLQAGVNKLADLVGVTLGPK 351
RP R S AAKELHFNKDG+ +KLQAGVNKLADLVGVTLGPK
Sbjct: 44 RPRRSSPAIVCAAKELHFNKDGTTIRKLQAGVNKLADLVGVTLGPK 89
>gb|AFW66837.1| putative TCP-1/cpn60 chaperonin family protein isoform 1 [Zea mays]
gi|413926906|gb|AFW66838.1| putative TCP-1/cpn60
chaperonin family protein isoform 2 [Zea mays]
Length = 605
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +1
Query: 211 VRPARRSFVTTRAAKELHFNKDGSATKKLQAGVNKLADLVGVTLGPK 351
+RP R+ AAKELHFNKDGSA +K+Q GVNKLADLVGVTLGPK
Sbjct: 43 MRPRRKYNFRVNAAKELHFNKDGSAIRKMQNGVNKLADLVGVTLGPK 89
>ref|XP_003574065.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic-like [Brachypodium distachyon]
Length = 598
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/46 (76%), Positives = 37/46 (80%)
Frame = +1
Query: 214 RPARRSFVTTRAAKELHFNKDGSATKKLQAGVNKLADLVGVTLGPK 351
RP R+ AAKEL+FNKDGSA KKLQ GVNKLADLVGVTLGPK
Sbjct: 42 RPRRKCSFRVNAAKELYFNKDGSAIKKLQNGVNKLADLVGVTLGPK 87
>gb|ACG36615.1| ruBisCO large subunit-binding protein subunit beta [Zea mays]
Length = 605
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +1
Query: 211 VRPARRSFVTTRAAKELHFNKDGSATKKLQAGVNKLADLVGVTLGPK 351
+RP R+ AAKELHFNKDGSA +K+Q GVNKLADLVGVTLGPK
Sbjct: 43 MRPRRKYNFRVNAAKELHFNKDGSAIRKMQNGVNKLADLVGVTLGPK 89
>ref|NP_001146890.1| ruBisCO large subunit-binding protein subunit beta [Zea mays]
gi|195604772|gb|ACG24216.1| ruBisCO large
subunit-binding protein subunit beta [Zea mays]
Length = 604
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +1
Query: 211 VRPARRSFVTTRAAKELHFNKDGSATKKLQAGVNKLADLVGVTLGPK 351
+RP R+ AAKELHFNKDGSA +K+Q GVNKLADLVGVTLGPK
Sbjct: 43 MRPRRKYNFRVNAAKELHFNKDGSAIRKMQNGVNKLADLVGVTLGPK 89
>ref|NP_175945.1| chaperonin 60 subunit beta 1 [Arabidopsis thaliana]
gi|30695947|ref|NP_849811.1| chaperonin 60 subunit beta
1 [Arabidopsis thaliana]
gi|27735252|sp|P21240.3|CPNB1_ARATH RecName:
Full=Chaperonin 60 subunit beta 1, chloroplastic;
Short=CPN-60 beta 1; AltName: Full=60 kDa chaperonin
subunit beta 1; AltName: Full=RuBisCO large
subunit-binding protein subunit beta, chloroplastic;
Flags: Precursor gi|14423416|gb|AAK62390.1|AF386945_1
Rubisco subunit binding-protein beta subunit
[Arabidopsis thaliana] gi|4204266|gb|AAD10647.1| Rubisco
subunit binding-protein beta subunit [Arabidopsis
thaliana] gi|20148345|gb|AAM10063.1| Rubisco subunit
binding-protein beta subunit [Arabidopsis thaliana]
gi|222423239|dbj|BAH19596.1| AT1G55490 [Arabidopsis
thaliana] gi|332195130|gb|AEE33251.1| chaperonin 60
subunit beta 1 [Arabidopsis thaliana]
gi|332195131|gb|AEE33252.1| chaperonin 60 subunit beta 1
[Arabidopsis thaliana]
Length = 600
Score = 69.7 bits (169), Expect = 4e-10
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = +1
Query: 214 RPARRSFVTTRAAKELHFNKDGSATKKLQAGVNKLADLVGVTLGPK 351
RP R S AAKELHFNKDG+ ++LQAGVNKLADLVGVTLGPK
Sbjct: 44 RPRRSSSAIVCAAKELHFNKDGTTIRRLQAGVNKLADLVGVTLGPK 89