BLASTX nr result

ID: Ephedra27_contig00014559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00014559
         (411 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26011.1| unknown [Picea sitchensis]                              97   2e-18
ref|XP_006826619.1| hypothetical protein AMTR_s00138p00105620 [A...    58   1e-06

>gb|ABK26011.1| unknown [Picea sitchensis]
          Length = 328

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 55/131 (41%), Positives = 76/131 (58%), Gaps = 10/131 (7%)
 Frame = -2

Query: 368 MGFWELSLAGSGFLAIGAWQAYSTLKHYFTDQQKIP----------YRKRASYKQEXXXX 219
           MGFW LSLAG+GF+ IG WQAYST   Y T                YRKR  Y  E    
Sbjct: 1   MGFWGLSLAGAGFIMIGIWQAYSTAMIYLTRSSSSSSSRPSSSSGLYRKRPFYTAELLFI 60

Query: 218 XXXXXXXXXXXXIQSHHGLSQGEFLGSTVQMEKSGVASIFLLYSLVGLISEYANKILPIP 39
                       + S++GL+ G+ L   +Q+EKSGVAS+FL+YS+VG+I +   ++LP+P
Sbjct: 61  ASLALLYILNAALSSYNGLNHGDPLVLGIQLEKSGVASLFLMYSVVGMICQ-CTQLLPLP 119

Query: 38  TEFHDLVALFA 6
            E ++L+A+FA
Sbjct: 120 WEVNNLIAVFA 130


>ref|XP_006826619.1| hypothetical protein AMTR_s00138p00105620 [Amborella trichopoda]
           gi|548831000|gb|ERM93856.1| hypothetical protein
           AMTR_s00138p00105620 [Amborella trichopoda]
          Length = 325

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
 Frame = -2

Query: 368 MGFWELSLAGSGFLAIGAWQAYSTLKHYFTDQQKIPYRKRASYK---QEXXXXXXXXXXX 198
           MG   L + G G + IGAWQA ++   + +       R  ++      +           
Sbjct: 1   MGVGSLCVGGLGLIGIGAWQALTSATAFISSITHNTTRSNSNNNPPPSQLSAMAIISLLF 60

Query: 197 XXXXXIQSHHGLSQGEFLGSTVQMEKSGVASIFLLYSLVGLISEYANKILPIPTEFHDLV 18
                  S  GL   + LG +VQ+E S ++SIFLLYS+ GL+SE  + +LP+ +   +L+
Sbjct: 61  LLNSLFSSLKGLQARDHLGFSVQLEVSVISSIFLLYSIAGLLSELTH-LLPLSSPTLNLI 119

Query: 17  ALFA 6
           ALFA
Sbjct: 120 ALFA 123


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