BLASTX nr result

ID: Ephedra27_contig00014321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00014321
         (973 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006652711.1| PREDICTED: ABC transporter C family member 9...    55   2e-06
ref|XP_006652712.1| PREDICTED: ABC transporter C family member 9...    55   2e-06
emb|CAD59598.1| MRP-like ABC transporter [Oryza sativa Japonica ...    58   5e-06
gb|EEC77875.1| hypothetical protein OsI_17163 [Oryza sativa Indi...    58   5e-06
gb|EEE61575.1| hypothetical protein OsJ_15949 [Oryza sativa Japo...    57   8e-06

>ref|XP_006652711.1| PREDICTED: ABC transporter C family member 9-like isoform X1 [Oryza
           brachyantha]
          Length = 1531

 Score = 55.5 bits (132), Expect(2) = 2e-06
 Identities = 29/96 (30%), Positives = 52/96 (54%)
 Frame = +1

Query: 556 RFSLIFKAXXXXXXXXXXXHFVTLVCDILLGTQAQCASTAPVLTKDVVLTLSWAFMSAVA 735
           +  +I++A           H V ++   L G+   C     VL + V + LSW  +S+ A
Sbjct: 102 KLGIIYQASKVCCLLSLASHTVKILFWWLQGSICDCKYPTFVLGESVQM-LSWIILSSAA 160

Query: 736 FNFRQSKLKRLPILLRCWWTCACFQSIISLVYDINA 843
           F+F+++K  +LP+++R WW     QSI S+V+D+ +
Sbjct: 161 FSFQKTKSAKLPLIIRIWWIFFFLQSITSVVFDLRS 196



 Score = 23.9 bits (50), Expect(2) = 2e-06
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 383 VIHLTFFIGFLFTSVWRRIAQLSRKHRKGVEKAEFYRE 496
           +IHL F +  L   +++RI    ++ +  VE    Y E
Sbjct: 58  LIHLIFIMSILVQFLYKRIRWSRQRFKTTVENKHSYEE 95


>ref|XP_006652712.1| PREDICTED: ABC transporter C family member 9-like isoform X2 [Oryza
           brachyantha]
          Length = 1301

 Score = 55.5 bits (132), Expect(2) = 2e-06
 Identities = 29/96 (30%), Positives = 52/96 (54%)
 Frame = +1

Query: 556 RFSLIFKAXXXXXXXXXXXHFVTLVCDILLGTQAQCASTAPVLTKDVVLTLSWAFMSAVA 735
           +  +I++A           H V ++   L G+   C     VL + V + LSW  +S+ A
Sbjct: 102 KLGIIYQASKVCCLLSLASHTVKILFWWLQGSICDCKYPTFVLGESVQM-LSWIILSSAA 160

Query: 736 FNFRQSKLKRLPILLRCWWTCACFQSIISLVYDINA 843
           F+F+++K  +LP+++R WW     QSI S+V+D+ +
Sbjct: 161 FSFQKTKSAKLPLIIRIWWIFFFLQSITSVVFDLRS 196



 Score = 23.9 bits (50), Expect(2) = 2e-06
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 383 VIHLTFFIGFLFTSVWRRIAQLSRKHRKGVEKAEFYRE 496
           +IHL F +  L   +++RI    ++ +  VE    Y E
Sbjct: 58  LIHLIFIMSILVQFLYKRIRWSRQRFKTTVENKHSYEE 95


>emb|CAD59598.1| MRP-like ABC transporter [Oryza sativa Japonica Group]
          Length = 1574

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 28/77 (36%), Positives = 49/77 (63%)
 Frame = +1

Query: 613 HFVTLVCDILLGTQAQCASTAPVLTKDVVLTLSWAFMSAVAFNFRQSKLKRLPILLRCWW 792
           H + +V  +L G+ + C   A VL + V + LSW  +S V F+F+++K  +LP+++R WW
Sbjct: 164 HTLKIVVLLLQGSISDCKYPAFVLGESVQV-LSWIILSLVVFSFQKTKSAKLPLIIRAWW 222

Query: 793 TCACFQSIISLVYDINA 843
             +  QSI S+V+D+ +
Sbjct: 223 IFSFLQSITSVVFDLRS 239


>gb|EEC77875.1| hypothetical protein OsI_17163 [Oryza sativa Indica Group]
          Length = 1624

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 28/77 (36%), Positives = 49/77 (63%)
 Frame = +1

Query: 613 HFVTLVCDILLGTQAQCASTAPVLTKDVVLTLSWAFMSAVAFNFRQSKLKRLPILLRCWW 792
           H + +V  +L G+ + C   A VL + V + LSW  +S V F+F+++K  +LP+++R WW
Sbjct: 122 HTLKIVVLLLQGSISDCKYPAFVLGESVQV-LSWIILSLVVFSFQKTKSAKLPLIIRAWW 180

Query: 793 TCACFQSIISLVYDINA 843
             +  QSI S+V+D+ +
Sbjct: 181 IFSFLQSITSVVFDLRS 197


>gb|EEE61575.1| hypothetical protein OsJ_15949 [Oryza sativa Japonica Group]
          Length = 1532

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 28/77 (36%), Positives = 48/77 (62%)
 Frame = +1

Query: 613 HFVTLVCDILLGTQAQCASTAPVLTKDVVLTLSWAFMSAVAFNFRQSKLKRLPILLRCWW 792
           H + +V  +L G+ + C   A VL + V + LSW  +S V F+F+++K  +LP ++R WW
Sbjct: 122 HTLKIVVLLLQGSISDCKYPAFVLGESVQV-LSWIILSLVVFSFQKTKSAKLPFIIRAWW 180

Query: 793 TCACFQSIISLVYDINA 843
             +  QSI S+V+D+ +
Sbjct: 181 IFSFLQSITSVVFDLRS 197


Top