BLASTX nr result
ID: Ephedra27_contig00014319
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00014319
(2924 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela... 1445 0.0
ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi... 1444 0.0
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A... 1429 0.0
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 1381 0.0
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 1367 0.0
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 1365 0.0
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 1362 0.0
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 1362 0.0
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 1360 0.0
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 1359 0.0
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 1350 0.0
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 1350 0.0
ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Sela... 1332 0.0
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 1312 0.0
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 1310 0.0
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao] 1308 0.0
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu... 1300 0.0
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [... 1295 0.0
ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III s... 1291 0.0
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 1268 0.0
>ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
gi|300146624|gb|EFJ13293.1| hypothetical protein
SELMODRAFT_446351 [Selaginella moellendorffii]
Length = 1393
Score = 1445 bits (3740), Expect = 0.0
Identities = 725/977 (74%), Positives = 824/977 (84%), Gaps = 5/977 (0%)
Frame = +1
Query: 1 VSNGPQKYPGANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSL 180
V NG +K+PGAN+++ DG ++ ++ G+ +R+A+ELKYG +VERHLEDGDIVLFNRQPSL
Sbjct: 421 VINGKEKHPGANFVVFPDGVKRFLKFGDRKRIASELKYGDVVERHLEDGDIVLFNRQPSL 480
Query: 181 HRMSIMSHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNN 360
HRMSIM HRARVMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL+LMG+QNN
Sbjct: 481 HRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALTLMGVQNN 540
Query: 361 LCTPKNGDILVASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKP 540
LCTPKNG+ILVASTQDFLTSSFLITR+DTFYDR F LMCSYMGD EHIDLPTPAILKP
Sbjct: 541 LCTPKNGEILVASTQDFLTSSFLITRRDTFYDRGQFALMCSYMGDAVEHIDLPTPAILKP 600
Query: 541 IELWTGKQLFSVLVRPNAKMRVFVNFIVMEKNYSKTGETMCPNDGCVYFRNSELISGQLG 720
+ELWTGKQLF VL+RP+A+++VF+NF+V EKN+ K ETMCP DG V+F+NSELI GQLG
Sbjct: 601 VELWTGKQLFGVLIRPSARIKVFLNFVVCEKNHKKGTETMCPKDGYVFFKNSELICGQLG 660
Query: 721 KATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTA 900
K TLGNG+K GLF+VLLRDY AAASCMNRLAKLSARWIGNHGFSIGIDDVQPG+RLT
Sbjct: 661 KGTLGNGSKDGLFTVLLRDYGEQAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGSRLTV 720
Query: 901 KKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLKEL 1080
+KE+R+ EGY CDKHI L+NKG+L LQPGC+AAQTLE+EITGELNKIRE AG VC+ EL
Sbjct: 721 EKEKRIAEGYRACDKHISLFNKGQLTLQPGCDAAQTLESEITGELNKIREAAGQVCVNEL 780
Query: 1081 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAK 1260
HWRNSPLIMSQCGSKGS INISQMIACVGQQSV G RAPNGFI+RSLPHFPRNDK P AK
Sbjct: 781 HWRNSPLIMSQCGSKGSVINISQMIACVGQQSVSGHRAPNGFIERSLPHFPRNDKTPQAK 840
Query: 1261 GFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGTVR 1440
GFVANSFY+GLTATEF FHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLS YDGTVR
Sbjct: 841 GFVANSFYSGLTATEFIFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSCQYDGTVR 900
Query: 1441 SANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSPALSVSELSKRVD 1620
+++ IVQ +YGDD+MDPV MEG++G PLNLDR+LMK KATCP +PAL SEL K V+
Sbjct: 901 NSSGVIVQLIYGDDSMDPVSMEGQNGTPLNLDRVLMKAKATCPRGTTPALPPSELWKIVE 960
Query: 1621 ERLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKT--RLTLGLSEEKNNDPDLAGLENI 1794
+ S Q + CS AF +SL FL K + T RL+L L + N D EN+
Sbjct: 961 SKFS----QDGSECSTAFLDSLRKFLRKEFDTISSTRKRLSLPLDDFGNVDD-----ENV 1011
Query: 1795 ALDICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVA 1974
A ++ G T+RQLEVFL TCI RYH K+++ G AVGAIGAQSIGEPGTQMTLKTFHFAGVA
Sbjct: 1012 AANVSGLTSRQLEVFLNTCIGRYHRKKLDPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVA 1071
Query: 1975 SMNVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSIKT 2154
SMN+TLGVPRIKEIINA+K ISTPIITAKL+S+NDVKAARIVKGRIEKT LG+VAKSIK
Sbjct: 1072 SMNITLGVPRIKEIINASKKISTPIITAKLVSENDVKAARIVKGRIEKTALGDVAKSIKI 1131
Query: 2155 VLKPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPK---LKIKQQNLRVLDHEKLHI 2325
VL+P QAF+S+KLDM I SLQL+I A TVAE++LK PK +K+K+Q+++V D + +
Sbjct: 1132 VLRPGQAFVSIKLDMDRIYSLQLDIRAETVAEAVLKFPKIKSMKLKEQHVKVNDDRSISL 1191
Query: 2326 FPPEADRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDKGKYNLLVEGTNLAAVMGTQ 2505
PE+DR K+ FALHSL+N LPKVIVKGI TVERAVINQ+KGKYNLLVEGTNL AVMGT+
Sbjct: 1192 TTPESDRKKMLFALHSLQNMLPKVIVKGIPTVERAVINQEKGKYNLLVEGTNLKAVMGTE 1251
Query: 2506 GVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADVMTFKGQ 2685
GVDG T SNH+ E + LGIEAAR II EIQYTM SHGMSID RHMMLLADVMT++G+
Sbjct: 1252 GVDGRETTSNHIFETVEVLGIEAARNGIIKEIQYTMGSHGMSIDQRHMMLLADVMTYRGE 1311
Query: 2686 VLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXXXXXTGL 2865
+LGITRFG+AKMKDSVLMLASFEKTTDHLF ASVHGR DQIEGVSEC TGL
Sbjct: 1312 ILGITRFGMAKMKDSVLMLASFEKTTDHLFAASVHGRTDQIEGVSECIIMGIPMPLGTGL 1371
Query: 2866 LKVRQRVDHLPKLEYAP 2916
KVRQ+V +PKL Y P
Sbjct: 1372 FKVRQKVGRIPKLIYGP 1388
>ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi|162691719|gb|EDQ78080.1|
predicted protein [Physcomitrella patens]
Length = 1397
Score = 1444 bits (3737), Expect = 0.0
Identities = 728/980 (74%), Positives = 821/980 (83%), Gaps = 7/980 (0%)
Frame = +1
Query: 1 VSNGPQKYPGANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSL 180
+ NG K+PGAN+II DG++ ++ G+ RR AAELKYG IVERHLEDGDIVLFNRQPSL
Sbjct: 416 IINGMTKHPGANFIIFPDGNKLYLKFGDRRRYAAELKYGDIVERHLEDGDIVLFNRQPSL 475
Query: 181 HRMSIMSHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNN 360
HRMSIMSHRAR+MPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL LMG+ NN
Sbjct: 476 HRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVANN 535
Query: 361 LCTPKNGDILVASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKP 540
LCTPKNG+ILVASTQDFLTSS+L TRKDTFYDR F C YMGD +E+IDLPTP+I+KP
Sbjct: 536 LCTPKNGEILVASTQDFLTSSYLFTRKDTFYDRATFTQACVYMGDAAENIDLPTPSIIKP 595
Query: 541 IELWTGKQLFSVLVRPNAKMRVFVNFIVMEKNYSKTGE--TMCPNDGCVYFRNSELISGQ 714
+ELWTGKQLFSVLVRPNAK RVFVN + EKNY K +MCP DG VYFRNSELI GQ
Sbjct: 596 MELWTGKQLFSVLVRPNAKTRVFVNLVSYEKNYDKKANKGSMCPTDGYVYFRNSELICGQ 655
Query: 715 LGKATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARL 894
LGKATLGNGNK GLF+VLLRDY AAA CMNRLAKLSARWIGNHGFSIGIDDV P RL
Sbjct: 656 LGKATLGNGNKDGLFTVLLRDYGNEAAAVCMNRLAKLSARWIGNHGFSIGIDDVAPSDRL 715
Query: 895 TAKKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLK 1074
+KE+++T+GYN CD+HI LY KGKL LQPGCNAAQTLE+ +TGELNKIRE AG+VC
Sbjct: 716 NREKEKQITKGYNACDQHIQLYKKGKLELQPGCNAAQTLESAVTGELNKIREAAGNVCKD 775
Query: 1075 ELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPA 1254
ELHWRNSPLIMS+CGSKGS INISQM+ACVGQQSVGG+RAPNGFIDR+LPHFPR+D+ P
Sbjct: 776 ELHWRNSPLIMSECGSKGSFINISQMVACVGQQSVGGKRAPNGFIDRTLPHFPRHDRTPQ 835
Query: 1255 AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGT 1434
KGFVANSFY+GL+ATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLS YDGT
Sbjct: 836 GKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSAQYDGT 895
Query: 1435 VRSANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSPALSVSELSKR 1614
VR+++ IVQ LYGDD MDPV+MEGKDG P NLDR+LMKTKATCP+ G L +E+ K
Sbjct: 896 VRNSSGGIVQLLYGDDGMDPVYMEGKDGAPFNLDRMLMKTKATCPSYGQLGLPPTEIEKL 955
Query: 1615 VDERLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNNDPDLAGLENI 1794
+ERL+K DM E AF+ SL F++ I + TR LGL + N PD LE+
Sbjct: 956 FNERLTKPDMTSET--VGAFKTSLKKFMDSCIKDNISTRTKLGLPLDCNGGPDQTLLEST 1013
Query: 1795 ALDICGFTARQLE-----VFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFH 1959
A I G T+RQLE VFL+TCIKRYH KR+E GAAVGA+GAQSIGEPGTQMTLKTFH
Sbjct: 1014 ATYISGLTSRQLEICLLQVFLDTCIKRYHMKRVEPGAAVGAVGAQSIGEPGTQMTLKTFH 1073
Query: 1960 FAGVASMNVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVA 2139
FAGVASMN+TLGVPRIKEIINA+KNISTPIITA L+S ND KAARIVKGRIEKT LGEVA
Sbjct: 1074 FAGVASMNITLGVPRIKEIINASKNISTPIITAVLVSGNDEKAARIVKGRIEKTTLGEVA 1133
Query: 2140 KSIKTVLKPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLDHEKL 2319
KSIKTVL+ QA ISVKLDM+ I++LQL+I + TVA +I++TPK+K+K N+R++D +KL
Sbjct: 1134 KSIKTVLRASQAIISVKLDMKRIDALQLDINSDTVALAIVQTPKIKLKHVNIRIVDRDKL 1193
Query: 2320 HIFPPEADRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDKGKYNLLVEGTNLAAVMG 2499
+ PP+ D+ K+YF LHSL N LPKVIVKGI +VERAVIN++KG YNLLVEGTNL AVMG
Sbjct: 1194 IVIPPDQDKGKLYFYLHSLCNMLPKVIVKGIPSVERAVINKEKGVYNLLVEGTNLKAVMG 1253
Query: 2500 TQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADVMTFK 2679
GV+G TKSNHVIE EQTLGIEAAR IIDEIQYTM SHGM+ID RHMMLLADVMT+K
Sbjct: 1254 ISGVNGKLTKSNHVIEAEQTLGIEAARNVIIDEIQYTMGSHGMTIDARHMMLLADVMTYK 1313
Query: 2680 GQVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXXXXXT 2859
G+VLGITRFGIAKMKDSVLMLASFEKTTDHLFDA++HGRVD+IEGVSEC T
Sbjct: 1314 GEVLGITRFGIAKMKDSVLMLASFEKTTDHLFDAAIHGRVDKIEGVSECIIMGIPMPIGT 1373
Query: 2860 GLLKVRQRVDHLPKLEYAPS 2919
GL K+RQ+V+ LPKL Y P+
Sbjct: 1374 GLFKIRQKVEKLPKLSYGPT 1393
>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
gi|548832896|gb|ERM95665.1| hypothetical protein
AMTR_s00023p00196820 [Amborella trichopoda]
Length = 1383
Score = 1429 bits (3698), Expect = 0.0
Identities = 717/976 (73%), Positives = 817/976 (83%), Gaps = 4/976 (0%)
Frame = +1
Query: 1 VSNGPQKYPGANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSL 180
V NGP KYPGAN++IS G S+R+GN +R A ELK+G VERHLEDG+IVLFNRQPSL
Sbjct: 404 VRNGPVKYPGANFVIS-GGDTLSLRYGNKKRKADELKFGDFVERHLEDGEIVLFNRQPSL 462
Query: 181 HRMSIMSHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNN 360
HRMSIM HRARVMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL LMG+Q+N
Sbjct: 463 HRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNIHVPQTEEARTEALMLMGVQHN 522
Query: 361 LCTPKNGDILVASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKP 540
LCTPKNG+ILVASTQDFLTSS+LITRKDTFYDR F LMCSYMGDG E+IDLPTPA+LKP
Sbjct: 523 LCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYMGDGMENIDLPTPALLKP 582
Query: 541 IELWTGKQLFSVLVRPNAKMRVFVNFIVMEKNYSKTGETMCPNDGCVYFRNSELISGQLG 720
+ELWTGKQLFSVL+RP+A M+V+VN +MEKNYSK GETMC NDG VY RNSELISGQLG
Sbjct: 583 VELWTGKQLFSVLIRPHAHMKVYVNLSLMEKNYSKGGETMCANDGFVYIRNSELISGQLG 642
Query: 721 KATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTA 900
KATLGNGNK GLFSVLLRDYN++AAASCMNRLAKLSARWIGNHGFSIGIDDV PG+ LT
Sbjct: 643 KATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVLPGSHLTK 702
Query: 901 KKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLKEL 1080
+KEE++ GY+ CD ID Y+KGKL+L+PGCNAAQTLEAEIT LN IR+ A VC++EL
Sbjct: 703 QKEEQIKGGYSNCDAFIDAYDKGKLSLKPGCNAAQTLEAEITRVLNGIRDAAAKVCMEEL 762
Query: 1081 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAK 1260
HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDK PAAK
Sbjct: 763 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKTPAAK 822
Query: 1261 GFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGTVR 1440
GFVANSFYTGLTA EFFFHTMGGREGLVDTAVKTA+TGY+SRRL+K+LEDLSTHYD TVR
Sbjct: 823 GFVANSFYTGLTAAEFFFHTMGGREGLVDTAVKTADTGYLSRRLIKSLEDLSTHYDDTVR 882
Query: 1441 SANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSPALSVSELSKRVD 1620
+++ I+QF YGDD MDP MEGK G PLNLDRL MK KATCPA+ S +LS SE+S V+
Sbjct: 883 NSSGTIIQFSYGDDGMDPAKMEGKSGVPLNLDRLFMKIKATCPASVSASLSPSEISTIVN 942
Query: 1621 ERLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNNDPDLAGLENIAL 1800
+RLSK+DM PE GCS AF+ L NF++K + +KKTR LGL E+ + +GLE++A
Sbjct: 943 DRLSKHDMTPERGCSMAFKEELSNFIKKRMDAIKKTRNMLGLDEDCVDKEKFSGLEHVAA 1002
Query: 1801 DICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVASM 1980
+I G + +QL VFLETCI RYH KR+EAG A+GAIGAQSIGEPGTQMTLKTFHFAGVASM
Sbjct: 1003 NISGISRQQLRVFLETCISRYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASM 1062
Query: 1981 NVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSIKTVL 2160
N+TLGVPRIKEI+ A+K ISTPIITA L+ DND K+ARIVKGRIEKT+LGEVAK++K +
Sbjct: 1063 NITLGVPRIKEILGASKKISTPIITATLVCDNDEKSARIVKGRIEKTLLGEVAKTVKISV 1122
Query: 2161 KPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLD----HEKLHIF 2328
P QA I++ LDM+ IE+LQ+ I A TVA+SI + K K+ + L+V +KL I
Sbjct: 1123 TPTQASINITLDMKRIEALQMAIDAKTVADSISENLKAKVSRTKLKVKPTFTLPDKLKIL 1182
Query: 2329 PPEADRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDKGKYNLLVEGTNLAAVMGTQG 2508
PE R ++ ++LH L++ LPK+IVKGI TVERAVIN KGK NLLVEGTNL AVMGT G
Sbjct: 1183 LPEIGRKEVLYSLHLLQSLLPKIIVKGIPTVERAVINNVKGKLNLLVEGTNLLAVMGTPG 1242
Query: 2509 VDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADVMTFKGQV 2688
VDG NT SNH++E+E TLGIEAARK IIDEIQYTM SHGMSIDLRHMMLLAD+MTF+G V
Sbjct: 1243 VDGRNTTSNHIVEVEGTLGIEAARKSIIDEIQYTMKSHGMSIDLRHMMLLADLMTFRGLV 1302
Query: 2689 LGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXXXXXTGLL 2868
LGI RFGI KMK+SVLMLASFE+T D LFDA+ GRVD I GVSEC TG+L
Sbjct: 1303 LGIQRFGITKMKESVLMLASFERTADILFDATTRGRVDTIAGVSECIIMGVPMQIGTGIL 1362
Query: 2869 KVRQRVDHLPKLEYAP 2916
V+QR + L KL Y P
Sbjct: 1363 SVQQRPEQLAKLTYGP 1378
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 1381 bits (3575), Expect = 0.0
Identities = 704/973 (72%), Positives = 801/973 (82%), Gaps = 3/973 (0%)
Frame = +1
Query: 1 VSNGPQKYPGANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSL 180
+ NGP KYPGA I DGS +S+ +R A ELKYG IVERHLEDGD+VLFNRQPSL
Sbjct: 407 ILNGPFKYPGAKLIRYPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSL 466
Query: 181 HRMSIMSHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNN 360
HRMSIM HRAR+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL LMG+QNN
Sbjct: 467 HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNN 526
Query: 361 LCTPKNGDILVASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKP 540
LCTPKNG+ILVASTQDFLTSSFLITRKDTFYDR AF LMCSYMGDG + +DLPTPAI+KP
Sbjct: 527 LCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKP 586
Query: 541 IELWTGKQLFSVLVRPNAKMRVFVNFIVMEKNYSKTG--ETMCPNDGCVYFRNSELISGQ 714
+ELWTGKQLF+VL+RP+A +RV++N VMEK Y+K ETMCP+DG VYFRNSELISGQ
Sbjct: 587 VELWTGKQLFNVLLRPHANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQ 646
Query: 715 LGKATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARL 894
LGKATLGNGNK GLFSVLLRDYNA+AAA+CMNRLAKLSARWIGNHGFSIGIDDVQPG L
Sbjct: 647 LGKATLGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLL 706
Query: 895 TAKKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLK 1074
+K +R+ EGY C + I YNKGKL LQPGCNAAQTLEAEITG LNKIRE +VC++
Sbjct: 707 NDQKSKRIEEGYENCHELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCME 766
Query: 1075 ELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPA 1254
ELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDR+LPHFPR K P
Sbjct: 767 ELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPD 826
Query: 1255 AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGT 1434
AKGFVA+SFYTGLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRLMKALEDLS YD T
Sbjct: 827 AKGFVASSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDET 886
Query: 1435 VRSANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSPALSVSELSKR 1614
VR+AN +IVQFLYGDD MDP MEGKDG PLN +RL +K KATCPA + +LS ++ +
Sbjct: 887 VRNANGSIVQFLYGDDGMDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQIEET 946
Query: 1615 VDERLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNNDPDLAGLENI 1794
V +RL +++ E GCS AF+ +L FLE+ K TR LGL E + +L E
Sbjct: 947 V-KRLKEHNTSAE-GCSDAFKTNLSGFLEECKEKFKNTREALGLHGEHVGEENLDIQEKF 1004
Query: 1795 ALDICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVA 1974
A +I G T++QL+VFL+TCI RY KR+EAG A+GAIGA SIGEPGTQMTLKTFHFAGVA
Sbjct: 1005 AKNISGITSKQLQVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVA 1064
Query: 1975 SMNVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSIKT 2154
SMNVTLGVPRIKEIIN AK ISTPIITA L +N+VK AR+VKGRIE+T LG+VAKSIK
Sbjct: 1065 SMNVTLGVPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKI 1124
Query: 2155 VLKPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLDHEKLHIFPP 2334
VL A I+V LDM I++ QL I + V ESIL+ ++K+KQQ+++VLD KL + P
Sbjct: 1125 VLTSRLALIAVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQHIKVLDAGKLEVH-P 1183
Query: 2335 EADRLKIYFALHSLRNKLPKVIVKGISTVERAVINQD-KGKYNLLVEGTNLAAVMGTQGV 2511
+ DR I+F LH+L+N LP V+VKGI TVERAVIN+D K KYNLLVEGT L VMGT+GV
Sbjct: 1184 QGDRSTIHFELHALKNLLPTVVVKGIETVERAVINKDNKVKYNLLVEGTGLQTVMGTEGV 1243
Query: 2512 DGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADVMTFKGQVL 2691
G T SNH+IE++QTLGIEAARKCII+EIQYTMASHGMSID+RHMMLLAD+MTF+G+VL
Sbjct: 1244 IGRETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHGMSIDIRHMMLLADLMTFRGEVL 1303
Query: 2692 GITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXXXXXTGLLK 2871
GITRFGI KM SVLMLASFEKT DHLF+ASV GR D+IEGVSEC TG+LK
Sbjct: 1304 GITRFGIQKMDKSVLMLASFEKTADHLFNASVSGRDDKIEGVSECIIMGIPMQLGTGILK 1363
Query: 2872 VRQRVDHLPKLEY 2910
VRQR+ +P+L Y
Sbjct: 1364 VRQRLQQVPELSY 1376
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 1367 bits (3537), Expect = 0.0
Identities = 687/990 (69%), Positives = 801/990 (80%), Gaps = 18/990 (1%)
Frame = +1
Query: 1 VSNGPQKYPGANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSL 180
+ NGP KYPGAN++ DG +QS+++G+ R A +LK G IVERHLEDGD+VLFNRQPSL
Sbjct: 397 IRNGPFKYPGANFVTQPDGMKQSLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSL 456
Query: 181 HRMSIMSHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNN 360
HRMSIMSHRAR+MPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL LMG+QNN
Sbjct: 457 HRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNN 516
Query: 361 LCTPKNGDILVASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKP 540
LCTPKNG+ILVASTQDFLTSSFL+TRKDTFYDR +F L+CSY+GD E+IDLPTPA++KP
Sbjct: 517 LCTPKNGEILVASTQDFLTSSFLVTRKDTFYDRSSFTLLCSYLGDAMENIDLPTPALIKP 576
Query: 541 IELWTGKQLFSVLVRPNAKMRVFVNFIVMEKNYSKTG-------------ETMCPNDGCV 681
IELWTGKQLFSVLVRPNA RVF+N V EK YSK ETMCPNDG V
Sbjct: 577 IELWTGKQLFSVLVRPNAHTRVFLNLAVQEKIYSKKKGKKEAGEETMCGRETMCPNDGYV 636
Query: 682 YFRNSELISGQLGKATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSI 861
YFRNSEL+SGQ+GKATLGNGNK GL+SVLLRDYN++AAASCMNRLAK SAR+IGNHGFSI
Sbjct: 637 YFRNSELLSGQVGKATLGNGNKDGLYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSI 696
Query: 862 GIDDVQPGARLTAKKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNK 1041
G+DDVQPG L +K++ + GY KC I L+ KG L L PGCNAAQTLE ITG LN+
Sbjct: 697 GVDDVQPGEHLNRQKKKEIDGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNE 756
Query: 1042 IRELAGSVCLKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSL 1221
IR +AG+VC+ LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GF++R+L
Sbjct: 757 IRSIAGNVCMDTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTL 816
Query: 1222 PHFPRNDKKPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKA 1401
PHFP N K PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK
Sbjct: 817 PHFPINSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKG 876
Query: 1402 LEDLSTHYDGTVRSANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGS 1581
LEDLS YD TVR+A+ IVQFLYGDD MDP MEGKDG PLNLD+L MK ATCP GS
Sbjct: 877 LEDLSVFYDQTVRNASGGIVQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCPQRGS 936
Query: 1582 PALSVSELSKRVDERLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKN 1761
LS + + ++++L ++D + GCS F+ +L FL+K I +K TR L L E+
Sbjct: 937 DTLSPEAIKQMLEDKLLQHDTSSDGGCSEEFKKNLTEFLDKRIELMKCTRRALHLHEDHV 996
Query: 1762 NDPDLAGLENIALDICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQM 1941
D E++A I G +A+QL+VFL+TC+ RY SK++EAGA++GAIGAQSIGEPGTQM
Sbjct: 997 EKKDSCVEESVAAIISGISAKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQM 1056
Query: 1942 TLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKT 2121
TLKTFHFAGVASMNVTLGVPRIKEIINAA+ ISTPIITA+L+S DV +ARIVKG +EK
Sbjct: 1057 TLKTFHFAGVASMNVTLGVPRIKEIINAARKISTPIITAQLLSKKDVLSARIVKGSMEKA 1116
Query: 2122 VLGEVAKSIKTVLKPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRV 2301
VLGEVA +I+ VLK Q + VKLDM++IESL + I+A +V SIL PK+K+K +++RV
Sbjct: 1117 VLGEVAVAIQIVLKSSQPNLIVKLDMQLIESLHMGISADSVQLSILNHPKIKLKSEHVRV 1176
Query: 2302 LDHEKLHIFPPEADRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDKGK-----YNLL 2466
+D KL I+P D+ K+ LH+L++ LPKVIVKGI TVER VI++ K K Y LL
Sbjct: 1177 IDRAKLRIYPAGTDKRKLQLELHNLKSILPKVIVKGIPTVERVVIDEVKVKNETERYQLL 1236
Query: 2467 VEGTNLAAVMGTQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRH 2646
VEGTNL AVMGT GVD TKSNH++E QTLGIEAAR+ IIDEIQYTM SHGM+ID RH
Sbjct: 1237 VEGTNLLAVMGTPGVDATKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRH 1296
Query: 2647 MMLLADVMTFKGQVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSEC 2826
MMLLAD+MT+KG++LGITR+GIAKMK SVLMLASFEKT++HLF+AS GR DQIEGVSEC
Sbjct: 1297 MMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTSEHLFNASYSGREDQIEGVSEC 1356
Query: 2827 XXXXXXXXXXTGLLKVRQRVDHLPKLEYAP 2916
TG+LKVRQR+DH+P+ +Y P
Sbjct: 1357 IIMGIPMQLGTGILKVRQRLDHVPEFKYQP 1386
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 1365 bits (3533), Expect = 0.0
Identities = 681/989 (68%), Positives = 806/989 (81%), Gaps = 17/989 (1%)
Frame = +1
Query: 1 VSNGPQKYPGANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSL 180
+ NGP K+PGAN+II DG++ +++ + R A +LKYG +VERHLEDGDIVLFNRQPSL
Sbjct: 397 IRNGPHKHPGANFIIQTDGTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSL 456
Query: 181 HRMSIMSHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNN 360
HRMSIMSHRAR+MPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL LMG+QNN
Sbjct: 457 HRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNN 516
Query: 361 LCTPKNGDILVASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKP 540
LCTPKNG+ILVASTQDFLTSSFL+TRKD FYDR +F L+CSY+GD E+IDLPTPA++KP
Sbjct: 517 LCTPKNGEILVASTQDFLTSSFLVTRKDNFYDRSSFTLLCSYLGDAMENIDLPTPALVKP 576
Query: 541 IELWTGKQLFSVLVRPNAKMRVFVNFIVMEKNYSKTGETMCPNDGCVYFRNSELISGQLG 720
IELWTGKQLFSVLVRPNA +VF+N V EK YSK+ ETMCPNDG VYFRNSEL+SGQ+G
Sbjct: 577 IELWTGKQLFSVLVRPNACTKVFLNLTVKEKIYSKSRETMCPNDGFVYFRNSELLSGQVG 636
Query: 721 KATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTA 900
K TLGNGNK G+FS+L+RDYN++AAASCMNRLAK SAR+IGNHGFSIG+DDV+PG L
Sbjct: 637 KKTLGNGNKDGMFSILVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVRPGEHLDQ 696
Query: 901 KKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLKEL 1080
+K++++ EGY +C I ++KG L LQPGCNAAQTLE +IT LNKIRE AG++C+ L
Sbjct: 697 QKKKKIDEGYKECHDLITSFSKGALTLQPGCNAAQTLEHKITHVLNKIREAAGNICMDTL 756
Query: 1081 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAK 1260
HWRNSPLIMSQCGSKGSPINISQM+ CVGQQSVGG RAPNGFIDR+LPHFP N K PAAK
Sbjct: 757 HWRNSPLIMSQCGSKGSPINISQMVVCVGQQSVGGHRAPNGFIDRTLPHFPINSKTPAAK 816
Query: 1261 GFVANSFYTGLT-----------------ATEFFFHTMGGREGLVDTAVKTAETGYMSRR 1389
GFVANSFY GLT ATEFFFHTMGGREGLVDTAVKTAETGYMSRR
Sbjct: 817 GFVANSFYNGLTATEFFFHTMGGIYIVLPATEFFFHTMGGREGLVDTAVKTAETGYMSRR 876
Query: 1390 LMKALEDLSTHYDGTVRSANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCP 1569
LMK LEDLS YD TVR+A+ IVQFLYGDD MDP MEG+DG+PLNLD+L MK ATCP
Sbjct: 877 LMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMDPAKMEGEDGKPLNLDQLFMKVMATCP 936
Query: 1570 ANGSPALSVSELSKRVDERLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLS 1749
G LS E+ + ++++LS++D + GCS F+ L +FLE I +K TR L L
Sbjct: 937 QRGQNTLSPGEILQILNDKLSEHDASSDDGCSEKFKQLLKDFLEDRIKLLKSTRRALCL- 995
Query: 1750 EEKNNDPDLAGLENIALDICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEP 1929
+E + D + E+IA +I G +A+QL+VFL+TC+ RYHSK++EAGA++GAIGAQSIGEP
Sbjct: 996 DENHVGKDSSIEESIAANISGISAKQLQVFLDTCLSRYHSKKIEAGASIGAIGAQSIGEP 1055
Query: 1930 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGR 2109
GTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAK ISTPIITA+L+S DV +AR+VKG
Sbjct: 1056 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAELLSGKDVLSARVVKGS 1115
Query: 2110 IEKTVLGEVAKSIKTVLKPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQ 2289
+EK VLGEVA+ IK VLK Q + VKLDM+ IE L + I+A +V SIL P++K+K +
Sbjct: 1116 MEKAVLGEVAEDIKIVLKSSQPNLVVKLDMQRIEDLHMGISADSVQLSILNHPRIKLKSE 1175
Query: 2290 NLRVLDHEKLHIFPPEADRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDKGKYNLLV 2469
++RV+D KL ++P D+ K+ + LH+L++ LPKVIVKGI TVERAVI+Q KY+LLV
Sbjct: 1176 HVRVIDKAKLRVYPTAIDKSKLLYELHNLKSMLPKVIVKGIPTVERAVISQTGDKYSLLV 1235
Query: 2470 EGTNLAAVMGTQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHM 2649
EGTNL AVMGT GVD + TKSNH++E+ +TLGIEAAR+ IIDEIQYTM SHGM+ID RHM
Sbjct: 1236 EGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMTSHGMNIDSRHM 1295
Query: 2650 MLLADVMTFKGQVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECX 2829
MLLAD+MT+KG++LGITR+GIAKMK SVLMLASFEKT +HLF+AS GR DQIEGVSEC
Sbjct: 1296 MLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECI 1355
Query: 2830 XXXXXXXXXTGLLKVRQRVDHLPKLEYAP 2916
TG+LKVRQR+DHLP+ +Y P
Sbjct: 1356 IMGIPMQLGTGILKVRQRLDHLPEFKYQP 1384
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
italica]
Length = 1397
Score = 1362 bits (3526), Expect = 0.0
Identities = 687/993 (69%), Positives = 804/993 (80%), Gaps = 21/993 (2%)
Frame = +1
Query: 1 VSNGPQKYPGANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSL 180
+ NGP K+PGAN+II+ DG++ S+++G+ R A +LK G VERHLEDGD+VLFNRQPSL
Sbjct: 400 IRNGPYKHPGANFIITPDGTKLSLKYGDRRIHARDLKCGYTVERHLEDGDVVLFNRQPSL 459
Query: 181 HRMSIMSHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNN 360
HRMSIMSHRAR+MPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL LMG+QNN
Sbjct: 460 HRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNN 519
Query: 361 LCTPKNGDILVASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKP 540
LCTPKNG+ILVASTQDFLTSSFL+TRKD FYDR +F L+CSY+GD E+IDLPTPA++KP
Sbjct: 520 LCTPKNGEILVASTQDFLTSSFLVTRKDAFYDRSSFALLCSYVGDAMENIDLPTPALIKP 579
Query: 541 IELWTGKQLFSVLVRPNAKMRVFVNFIVMEKNYSKTGE----------------TMCPND 672
IELWTGKQLFSVLVRPNA+ +VF+N V EK YSK E TMCPND
Sbjct: 580 IELWTGKQLFSVLVRPNARTKVFLNLAVKEKIYSKKKEKKEGEEEEKETMCGRETMCPND 639
Query: 673 GCVYFRNSELISGQLGKATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHG 852
G VYFRNSEL+SGQ+GKATLGNGNK G++SVLLRDYN++AAASCMNRLAK SAR+IGNHG
Sbjct: 640 GYVYFRNSELLSGQVGKATLGNGNKDGIYSVLLRDYNSHAAASCMNRLAKFSARFIGNHG 699
Query: 853 FSIGIDDVQPGARLTAKKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGE 1032
FSIG+DDVQPG L +K++++ EGY +C I L+ KG L L PGCNAAQTLE +ITG
Sbjct: 700 FSIGVDDVQPGEHLNRQKKKKIDEGYKQCHDLISLFAKGALALHPGCNAAQTLEHKITGV 759
Query: 1033 LNKIRELAGSVCLKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFID 1212
LN+IR AG+VC+ LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GFID
Sbjct: 760 LNEIRTAAGNVCMDTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFID 819
Query: 1213 RSLPHFPRNDKKPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRL 1392
R+LPHFP N K PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRL
Sbjct: 820 RTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRL 879
Query: 1393 MKALEDLSTHYDGTVRSANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPA 1572
MK LEDLS YD TVR+A+ IVQFLYGDD MDP MEGKDG PLNLD+L MK ATCP
Sbjct: 880 MKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMDPAKMEGKDGTPLNLDQLFMKVTATCPH 939
Query: 1573 NGSPALSVSELSKRVDERLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSE 1752
G LS ++ + ++++L+++ + GCS F+ L FLE+ I +K TR L L E
Sbjct: 940 RGLDTLSPDDIKQMLEDKLTQHKTSSDGGCSEEFKECLKKFLEERIQLLKCTRKALHLDE 999
Query: 1753 EKNNDPDLAGLENIALDICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPG 1932
+ D E IA +I G +A+QL+VFL+TC RY+SK +EAGA++GAIGAQSIGEPG
Sbjct: 1000 KHVGKNDSCIEEIIAANISGISAKQLQVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPG 1059
Query: 1933 TQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRI 2112
TQMTLKTFHFAGVASMNVTLGVPRIKEIINAAK ISTPIIT +L+S DV +ARIVKG +
Sbjct: 1060 TQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITTELLSRKDVLSARIVKGAM 1119
Query: 2113 EKTVLGEVAKSIKTVLKPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQN 2292
EK VLGEVA +IK VLK Q + VKLDM++IE+L + I+A +V SIL PK+K+K ++
Sbjct: 1120 EKAVLGEVASAIKIVLKSSQPNLVVKLDMQLIEALHMGISADSVQLSILNHPKIKLKSEH 1179
Query: 2293 LRVLDHEKLHIFPPEADRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDK-----GKY 2457
+RV+D KL I+P D+ K+ LH+L+ LPKVIVKGI TVER VI++ K KY
Sbjct: 1180 VRVIDRAKLRIYPAGTDKSKLQLELHNLKAMLPKVIVKGIPTVERVVIDERKKEGKLEKY 1239
Query: 2458 NLLVEGTNLAAVMGTQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSID 2637
NLLVEGTNL AVMGT GVD NTKSNH++E+ TLGIEAAR+ IIDEIQYTM SHGM+ID
Sbjct: 1240 NLLVEGTNLLAVMGTPGVDARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMNID 1299
Query: 2638 LRHMMLLADVMTFKGQVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGV 2817
+RHMMLLAD+MT+KG+VLGITR+GIAKMK SVLMLASFEKT++HLF+AS GR D+IEGV
Sbjct: 1300 VRHMMLLADLMTYKGEVLGITRYGIAKMKTSVLMLASFEKTSEHLFNASYSGREDEIEGV 1359
Query: 2818 SECXXXXXXXXXXTGLLKVRQRVDHLPKLEYAP 2916
SEC TG+LKVRQR+DHLP+L+Y P
Sbjct: 1360 SECIIMGIPMQLGTGILKVRQRLDHLPELKYQP 1392
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
sativus]
Length = 1400
Score = 1362 bits (3525), Expect = 0.0
Identities = 689/993 (69%), Positives = 795/993 (80%), Gaps = 21/993 (2%)
Frame = +1
Query: 1 VSNGPQKYPGANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSL 180
VSNGP KYPGA + +DGS +S+ +RLA ELKYG IVERHLEDGD+VLFNRQPSL
Sbjct: 403 VSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSL 462
Query: 181 HRMSIMSHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNN 360
HRMSIM HR RVMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA+ LMG+QNN
Sbjct: 463 HRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNN 522
Query: 361 LCTPKNGDILVASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKP 540
LCTPKNG+ILVASTQDFLTSSFLITRKDTFYDR AF LMCSYMGDG + +DLPTPA++KP
Sbjct: 523 LCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKP 582
Query: 541 IELWTGKQLFSVLVRPNAKMRVFVNFIVMEKNYSKTG------ETMCPNDGCVYFRNSEL 702
IELWTGKQLFSVLVRP+A M+V++N V EK+YSK ETMCPNDG VYFRNSEL
Sbjct: 583 IELWTGKQLFSVLVRPHASMKVYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSEL 642
Query: 703 ISGQLGKATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQP 882
ISGQ+GKATLGNGNK GL+SVLLRDY A+AAA CMNRLAKLSARWIGNHGFSIGIDDVQP
Sbjct: 643 ISGQVGKATLGNGNKDGLYSVLLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQP 702
Query: 883 GARLTAKKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGS 1062
G +L KK+ + EGY CDK I+L+N G L + GC+AAQ+LE++IT LN IRE +
Sbjct: 703 GDQLVKKKQTTILEGYRDCDKQINLFNTGNLPPEAGCDAAQSLESKITQILNGIREATAN 762
Query: 1063 VCLKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRND 1242
VC++ LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GFIDRSLPHF R
Sbjct: 763 VCMQNLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKA 822
Query: 1243 KKPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTH 1422
K PAAKGFVANSFY+GLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+KALEDLS H
Sbjct: 823 KTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIH 882
Query: 1423 YDGTVRSANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSPALSVSE 1602
YD +VR+A IVQF YGDD MDP MEGK G PLN +RL +K KATCP++G+ LS SE
Sbjct: 883 YDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSE 942
Query: 1603 LSKRVDERLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEE--------K 1758
S+ V++RLSK D PE GCS AF SL FL KY+ KK+ TL E
Sbjct: 943 FSETVEDRLSKDDASPECGCSPAFVGSLKIFLNKYVEAQKKSWGTLLADNESAVDKSIIS 1002
Query: 1759 NNDPDLAGLEN-IALDICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGT 1935
++D D + N + +I G T RQL+VFL+TC+ RYH+K++EAG A+GAIGAQSIGEPGT
Sbjct: 1003 SSDNDNIVIRNKVVQNIAGVTHRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGT 1062
Query: 1936 QMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIE 2115
QMTLKTFHFAGVASMNVTLGVPRIKEIIN AK ISTPI+TA L D++V AR+VK RIE
Sbjct: 1063 QMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALTHDDNVNIARMVKARIE 1122
Query: 2116 KTVLGEVAKSIKTVLKPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNL 2295
KT LG++AK I+ V+ A I +KLDM I +L + A V ++IL TPKLK+K +++
Sbjct: 1123 KTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILVTPKLKLKHEHI 1182
Query: 2296 RVLDHEKLHIFPPEADRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDKG------KY 2457
VLD KL + P +ADR K++F LH L+N LP V+VKGI TV RAVI ++K K+
Sbjct: 1183 NVLDDRKLRVLPQDADRNKLHFNLHFLKNMLPGVVVKGIKTVGRAVIKEEKDKARNAKKF 1242
Query: 2458 NLLVEGTNLAAVMGTQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSID 2637
+LLVEGT L AVMGT+GVDG NTKSNH+IE++Q LGIEAARKCII+EI+YTM SHGMSID
Sbjct: 1243 SLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSID 1302
Query: 2638 LRHMMLLADVMTFKGQVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGV 2817
+RHMMLL D+MTF+G+VLGITRFGI KM SVLMLASFEKT DHLF+ASV+GR D+IEGV
Sbjct: 1303 IRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIEGV 1362
Query: 2818 SECXXXXXXXXXXTGLLKVRQRVDHLPKLEYAP 2916
SEC TG+LKVRQRV +L Y P
Sbjct: 1363 SECVIMGIPMPLGTGMLKVRQRVSVPQQLPYGP 1395
>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 1179
Score = 1360 bits (3519), Expect = 0.0
Identities = 697/999 (69%), Positives = 793/999 (79%), Gaps = 27/999 (2%)
Frame = +1
Query: 1 VSNGPQKYPGANYIISMDGS-------------RQSIRHGNPRRLAAELKYGSIVERHLE 141
VSNGP KYPGA + DGS SIR +RLA ELKYG IVERHLE
Sbjct: 176 VSNGPDKYPGARMLRRADGSTWQGLICFYYLCGHVSIRVSR-KRLADELKYGDIVERHLE 234
Query: 142 DGDIVLFNRQPSLHRMSIMSHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEA 321
DGDIVLFNRQPSLHRMSIM HRARVMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEA
Sbjct: 235 DGDIVLFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEA 294
Query: 322 RTEALSLMGIQNNLCTPKNGDILVASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGS 501
RTEA+ LMG+QNNLCTPKNG+ILVASTQDFLTSSFLITRKDTFYDR AF LMCSYMGD
Sbjct: 295 RTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDAM 354
Query: 502 EHIDLPTPAILKPIELWTGKQLFSVLVRPNAKMRVFVNFIVMEKNYS-------KTGETM 660
EH DLPTPA++KP+ELWTGKQLFSVLVRPNA +RVF+N V EKNYS + ETM
Sbjct: 355 EHNDLPTPAVIKPVELWTGKQLFSVLVRPNANVRVFLNLTVREKNYSNKLQENEREFETM 414
Query: 661 CPNDGCVYFRNSELISGQLGKATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWI 840
CP DG V FRNSELISGQLGK TLGNGNK GL+S+LLRDY A+AAA+CMNRLAKLSARWI
Sbjct: 415 CPADGFVCFRNSELISGQLGKGTLGNGNKDGLYSILLRDYKAHAAAACMNRLAKLSARWI 474
Query: 841 GNHGFSIGIDDVQPGARLTAKKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAE 1020
GNHGFSIGIDDVQP +L +K++++ EG CD I Y +G L +PGC+AAQ+LEA
Sbjct: 475 GNHGFSIGIDDVQPSDKLRDEKDQKINEGAKDCDDKIKSYKEGNLPPEPGCDAAQSLEAV 534
Query: 1021 ITGELNKIRELAGSVCLKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPN 1200
ITG LNKIRE G +C+K L WRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAPN
Sbjct: 535 ITGILNKIREETGKLCMKALPWRNSPLIMSQCGSKGSLINISQMVACVGQQSVGGRRAPN 594
Query: 1201 GFIDRSLPHFPRNDKKPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYM 1380
GFIDRSLPHFPR DK PAAKGFV++SFY GL+ATEFFFHTMGGREGLVDTAVKTA+TGYM
Sbjct: 595 GFIDRSLPHFPRKDKTPAAKGFVSHSFYDGLSATEFFFHTMGGREGLVDTAVKTADTGYM 654
Query: 1381 SRRLMKALEDLSTHYDGTVRSANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKA 1560
SRRL+KALEDL HYD TVR+A++ I+QF YGDD MDP HMEGK+G PLN +RL +K KA
Sbjct: 655 SRRLIKALEDLFVHYDNTVRNASACIIQFCYGDDGMDPAHMEGKNGAPLNFERLFLKAKA 714
Query: 1561 TCPANGSPALSVSELSKRVDERLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTL 1740
TCPA G+ LS ++S+ V+ RLSK DM PE GCSAAF+NSL +FL+ Y+ K+T
Sbjct: 715 TCPAGGTEKLSPEKVSELVESRLSKKDMTPEGGCSAAFKNSLKSFLDNYVKAFKRTWDPC 774
Query: 1741 GLSEEKNNDPDLAGLENIALDICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSI 1920
+E + A +NI L + G TARQLEVFL+TCI RYHSK++EAG A+GAIGAQSI
Sbjct: 775 ESTEGHAKMENSATTKNIVLQLSGATARQLEVFLDTCISRYHSKKIEAGTAIGAIGAQSI 834
Query: 1921 GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIV 2100
GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK ISTPIITA L DN+V ARIV
Sbjct: 835 GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKISTPIITAILECDNNVNFARIV 894
Query: 2101 KGRIEKTVLGEVAKSIKTVLKPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKI 2280
+GRIEK LG+VAKSIKTV+ A + + LDM I+ L I A V +SIL+TP++K+
Sbjct: 895 RGRIEKISLGQVAKSIKTVMTSRVASVVITLDMERIQDALLSIDANVVRDSILQTPRIKL 954
Query: 2281 KQQNLRVLDHEKLHIFPPEADRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDKG--- 2451
K++++RVLD +KL I P E++R K+Y L L L ++VKGI TVERAVI+ +K
Sbjct: 955 KKEHIRVLDFKKLEILPYESNRSKLYHHLQFLAKMLQNILVKGIKTVERAVISSEKDKKT 1014
Query: 2452 ----KYNLLVEGTNLAAVMGTQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMAS 2619
KY LLVEGT L VMGT+GVDG NTK+NH+IE++QTLGIEAAR CIIDEI+YTM S
Sbjct: 1015 DISKKYKLLVEGTGLLGVMGTEGVDGRNTKTNHIIEVQQTLGIEAARTCIIDEIEYTMKS 1074
Query: 2620 HGMSIDLRHMMLLADVMTFKGQVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRV 2799
HGMSID RHMMLLADVMT +G+VLGITRFGI KM SVLMLASFEKT DHLF+ASV+GR
Sbjct: 1075 HGMSIDTRHMMLLADVMTSRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRE 1134
Query: 2800 DQIEGVSECXXXXXXXXXXTGLLKVRQRVDHLPKLEYAP 2916
D+IEGVSEC TG++KVRQRVD P L Y P
Sbjct: 1135 DKIEGVSECIIMGIPMQIGTGMIKVRQRVDVPPMLSYGP 1173
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 1359 bits (3518), Expect = 0.0
Identities = 682/982 (69%), Positives = 798/982 (81%), Gaps = 10/982 (1%)
Frame = +1
Query: 1 VSNGPQKYPGANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSL 180
+ NGP K+PGAN+II DG++ +++ + R A +LKYG +VERHLEDGDIVLFNRQPSL
Sbjct: 397 IRNGPHKHPGANFIIQPDGTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSL 456
Query: 181 HRMSIMSHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNN 360
HRMSIMSHRAR+MPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL LMG+QNN
Sbjct: 457 HRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNN 516
Query: 361 LCTPKNGDILVASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKP 540
LCTPKNG+ILVASTQDFLTSSFL+TRKD FYDR +F L+CSY+GD E+IDLPTPA++KP
Sbjct: 517 LCTPKNGEILVASTQDFLTSSFLVTRKDNFYDRSSFSLLCSYLGDAMENIDLPTPALIKP 576
Query: 541 IELWTGKQLFSVLVRPNAKMRVFVNFIVMEKNYSKTG------ETMCPNDGCVYFRNSEL 702
IELWTGKQLFSVLVRPNA +VF+N V EK Y E MCPNDG VYFRNSEL
Sbjct: 577 IELWTGKQLFSVLVRPNACTKVFLNLTVKEKIYKTPKGSTLEPEAMCPNDGFVYFRNSEL 636
Query: 703 ISGQLGKATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQP 882
+SGQ+GKATLGNGNK G+FS L+RDYN++AAASCMNRLAK SAR+IGNHGFSIG+DDVQP
Sbjct: 637 LSGQVGKATLGNGNKDGMFSTLVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQP 696
Query: 883 GARLTAKKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGS 1062
G L +K+ ++ GY C I Y+KG L LQPGCNAAQTLE IT LN+IRE AG
Sbjct: 697 GEHLNQEKKMKIDGGYKDCHDLIASYSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGK 756
Query: 1063 VCLKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRND 1242
VC+ LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAPNGFIDR+LPHFP N
Sbjct: 757 VCMNTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINS 816
Query: 1243 KKPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTH 1422
K PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS
Sbjct: 817 KTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVF 876
Query: 1423 YDGTVRSANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSPALSVSE 1602
YD TVR+A+ IVQFLYGDD MDP MEGKDG+PLNLD+L MK ATCP G LS E
Sbjct: 877 YDQTVRNASGGIVQFLYGDDGMDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGE 936
Query: 1603 LSKRVDERLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNNDPDLAG 1782
+ + ++++LS++D + GCS F+ L FLE I +K TR L L E+ + +
Sbjct: 937 ILQILNDKLSEHDASSDDGCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSF 996
Query: 1783 LENIALDICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHF 1962
E+IA +I G + +QL+VFL+TC+ RYH K++EAGA++GAIGAQSIGEPGTQMTLKTFHF
Sbjct: 997 EESIAANISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHF 1056
Query: 1963 AGVASMNVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAK 2142
AGVASMNVTLGVPRIKEIINAAK ISTPIITA+L+S+ DV +ARIVKG +EK VLGEVA+
Sbjct: 1057 AGVASMNVTLGVPRIKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAE 1116
Query: 2143 SIKTVLKPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLDHEKLH 2322
+IK VLK Q + VKLDM+ IE+L + I+A +V SIL PK+K+K +++RV+D KL
Sbjct: 1117 AIKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDKSKLR 1176
Query: 2323 IFPPEADRLKIYFALHSLRNKLPKVIVKGISTVERAVIN----QDKGKYNLLVEGTNLAA 2490
I+P D+ K+ + LH L++ LPKVIVKGI TVERAVI+ ++ +Y LLVEGTNL A
Sbjct: 1177 IYPAGIDKSKLLYELHHLKSMLPKVIVKGIPTVERAVISETGEENDKRYKLLVEGTNLLA 1236
Query: 2491 VMGTQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADVM 2670
VMGT GVD + TKSNH++E+ +TLGIEAAR+ IIDEIQYTM SHGM+ID RHMMLLAD+M
Sbjct: 1237 VMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLADLM 1296
Query: 2671 TFKGQVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXXX 2850
T+KG++LGITR+GIAKMK SVLMLASFEKT +HLF+AS GR DQIEGVSEC
Sbjct: 1297 TYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQ 1356
Query: 2851 XXTGLLKVRQRVDHLPKLEYAP 2916
TG+LKVRQR+DHLP+ +Y P
Sbjct: 1357 LGTGILKVRQRLDHLPEFKYQP 1378
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Solanum tuberosum]
Length = 1394
Score = 1350 bits (3493), Expect = 0.0
Identities = 681/983 (69%), Positives = 803/983 (81%), Gaps = 11/983 (1%)
Frame = +1
Query: 1 VSNGPQKYPGANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSL 180
V NGP KYPGA +I DGS S+ + +R A ELK+G IV+RHLEDGDIVLFNRQPSL
Sbjct: 404 VRNGPNKYPGAKFIRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSL 463
Query: 181 HRMSIMSHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNN 360
HRMSIMSHRAR+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL LMG+QNN
Sbjct: 464 HRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNN 523
Query: 361 LCTPKNGDILVASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKP 540
LCTPK+G+ILVASTQDFLTSSFLITRKDTFY+R +F L+CSYMGD + DLP+PA +KP
Sbjct: 524 LCTPKSGEILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKP 583
Query: 541 IELWTGKQLFSVLVRPNAKMRVFVNFIVMEKNYSKTGETMCPNDGCVYFRNSELISGQLG 720
+ELWTGKQLF +L+RP +KMRV+VN V EK+YS GETMCP+DG VYFRNSELISGQLG
Sbjct: 584 VELWTGKQLFHMLLRPYSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLG 643
Query: 721 KATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTA 900
KATLGNGNK GL+SVLLRDY ++AAA+CMNRLAKLSARWIGNHGFSIGIDDV PG L
Sbjct: 644 KATLGNGNKDGLYSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVK 703
Query: 901 KKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLKEL 1080
+K+ + Y KC+ I +N+GKL +QPGC+AAQTLEAE+T LNK+R+ G +C+K L
Sbjct: 704 QKQGEIHRNYKKCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKAL 763
Query: 1081 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAK 1260
WRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDRSLPHFP K PAAK
Sbjct: 764 DWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAK 823
Query: 1261 GFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGTVR 1440
GFVA+SF+ GL+ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRLMKALEDL+ +YD TVR
Sbjct: 824 GFVAHSFFDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVR 883
Query: 1441 SANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSPALSVSELSKRVD 1620
+A++ IVQF+YGDD MDP ME K G PLN RL MK KATCP G +LS SE+ + V+
Sbjct: 884 NASACIVQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVN 943
Query: 1621 ERLSKYDMQPEAGCSAAFRNSLFNFLEKYIS-NVKKTRLTLGLSEEKNNDPDLAGLENIA 1797
ERLS +DM PE GCS AFR+SL +FL K ++ +K R +L L EE+ D LE IA
Sbjct: 944 ERLSYHDMTPEGGCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYLEKIA 1003
Query: 1798 LDICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVAS 1977
L+I G T RQL+VFL TCI RYH KR+EAG A+GAIGAQSIGEPGTQMTLKTFHFAGVAS
Sbjct: 1004 LNISGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1063
Query: 1978 MNVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSIKTV 2157
MNVTLGVPRIKEIINAAK I+TPIIT KL+S ++ AAR++K RIEKT+LG+VAKS+K V
Sbjct: 1064 MNVTLGVPRIKEIINAAKKITTPIITTKLLSAANLTAARMIKARIEKTLLGQVAKSVKIV 1123
Query: 2158 LKPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLDHEKLHIFPPE 2337
L A I++ LDM I+ QL I AYTV +SIL+T K+K+K+ ++VL+ KL +F P+
Sbjct: 1124 LASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVF-PQ 1182
Query: 2338 ADRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDKGK----------YNLLVEGTNLA 2487
A++ K++F LH L+NKLP V+VKGI+TV+RAV+N+++ K Y LLVEGT L
Sbjct: 1183 ANKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEGTGLL 1242
Query: 2488 AVMGTQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADV 2667
AVMG +GVDG TKSNH++E++ TLGIEAAR IIDEI YTM+SHGM+IDLRHMMLLAD+
Sbjct: 1243 AVMGIEGVDGRYTKSNHIMEVQNTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADL 1302
Query: 2668 MTFKGQVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXX 2847
MT+KG+VLGITR G+ KMKDSVLMLASFEKTTDHLF+ASV+GR D+IEGV+EC
Sbjct: 1303 MTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPM 1362
Query: 2848 XXXTGLLKVRQRVDHLPKLEYAP 2916
TG+ K+RQRV+ + +L Y P
Sbjct: 1363 TIGTGMFKLRQRVEQV-ELNYQP 1384
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
lycopersicum]
Length = 1390
Score = 1350 bits (3493), Expect = 0.0
Identities = 679/983 (69%), Positives = 802/983 (81%), Gaps = 11/983 (1%)
Frame = +1
Query: 1 VSNGPQKYPGANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSL 180
V NGP KYPGA +I DG+ S+ + +R A ELK+G IV+RHLEDGDIVLFNRQPSL
Sbjct: 404 VRNGPNKYPGAKFIRHPDGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLFNRQPSL 463
Query: 181 HRMSIMSHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNN 360
HRMSIMSHRAR+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL LMG+QNN
Sbjct: 464 HRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNN 523
Query: 361 LCTPKNGDILVASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKP 540
LCTPK+G+ILVASTQDFLTSSFLITRKDTFY+R +F L+CSYMGD + DLP+PA +KP
Sbjct: 524 LCTPKSGEILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKP 583
Query: 541 IELWTGKQLFSVLVRPNAKMRVFVNFIVMEKNYSKTGETMCPNDGCVYFRNSELISGQLG 720
+ELWTGKQLF VL+RP +KMRV+VN + EK+YS GETMC +DG VYFRNSELISGQLG
Sbjct: 584 VELWTGKQLFHVLLRPYSKMRVYVNLTLTEKSYSGKGETMCSSDGFVYFRNSELISGQLG 643
Query: 721 KATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTA 900
KATLGNGNK GL+SVLLRDY ++AAA+CMNRLAKLSARWIGNHGFSIGIDDV PG L
Sbjct: 644 KATLGNGNKDGLYSVLLRDYESHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVK 703
Query: 901 KKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLKEL 1080
+K+ + Y KC+ I +N+GKL +QPGC+AAQTLEAE+T LNK+R+ G +C+K L
Sbjct: 704 QKQGEIHRNYKKCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKAL 763
Query: 1081 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAK 1260
WRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDRSLPHFP K PAAK
Sbjct: 764 DWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAK 823
Query: 1261 GFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGTVR 1440
GFVA+SF+ GL+ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRLMKALEDL+ +YD TVR
Sbjct: 824 GFVAHSFFDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVR 883
Query: 1441 SANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSPALSVSELSKRVD 1620
+A++ IVQF+YGDD MDP ME K G PLN RL MK KATCP G +LS SE+ + V+
Sbjct: 884 NASACIVQFMYGDDGMDPSRMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVN 943
Query: 1621 ERLSKYDMQPEAGCSAAFRNSLFNFLEKYIS-NVKKTRLTLGLSEEKNNDPDLAGLENIA 1797
ERLS +DM PE GCS AFR SL +FL K ++ +K R +L L EE+ D LE I
Sbjct: 944 ERLSYHDMTPEGGCSEAFRASLSDFLIKSLAETLKNLRESLLLGEEQYEGDDRGYLEKIV 1003
Query: 1798 LDICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAGVAS 1977
L+I G T +QL+VFL TCI RYH KR+EAG A+GAIGAQSIGEPGTQMTLKTFHFAGVAS
Sbjct: 1004 LNISGITKKQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1063
Query: 1978 MNVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSIKTV 2157
MNVTLGVPRIKEIINAAK I+TPIITAKL+S ++ AAR++K RIEKT+LG+VAKS+K V
Sbjct: 1064 MNVTLGVPRIKEIINAAKKITTPIITAKLLSAGNLTAARMIKARIEKTLLGQVAKSVKIV 1123
Query: 2158 LKPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLDHEKLHIFPPE 2337
L A I++ LDM I+ QL I AYTV +SIL+T K+K+K+ ++VL+ KL +F P+
Sbjct: 1124 LASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVF-PQ 1182
Query: 2338 ADRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDKGK----------YNLLVEGTNLA 2487
A++ K++F LH L+NKLP V+VKGI+TV+RAV+N+++ K Y LLVEGT L
Sbjct: 1183 ANKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEGTGLL 1242
Query: 2488 AVMGTQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADV 2667
AVMG +GVDG TKSNH++E++ TLGIEAAR IIDEI YTM+SHGM+IDLRHMMLLAD+
Sbjct: 1243 AVMGIEGVDGRYTKSNHIMEVQHTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADL 1302
Query: 2668 MTFKGQVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVSECXXXXXXX 2847
MT+KG+VLGITR G+ KMKDSVLMLASFEKTTDHLF+ASV+GR D+IEGV+EC
Sbjct: 1303 MTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPM 1362
Query: 2848 XXXTGLLKVRQRVDHLPKLEYAP 2916
TG+ K+RQRV+H+ +L Y P
Sbjct: 1363 TIGTGMFKLRQRVEHV-ELNYQP 1384
>ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Selaginella moellendorffii]
gi|300158014|gb|EFJ24638.1| hypothetical protein
SELMODRAFT_442419 [Selaginella moellendorffii]
Length = 1348
Score = 1332 bits (3446), Expect = 0.0
Identities = 668/905 (73%), Positives = 762/905 (84%), Gaps = 7/905 (0%)
Frame = +1
Query: 1 VSNGPQKYPGANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSL 180
V NG +K+PGAN+++ DG ++ ++ G+ +R+A+ELKYG +VERHLEDGDIVLFNRQPSL
Sbjct: 421 VINGKEKHPGANFVVFPDGVKRFLKFGDRKRIASELKYGDVVERHLEDGDIVLFNRQPSL 480
Query: 181 HRMSIMSHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNN 360
HRMSIM HRARVMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL+LMG+QNN
Sbjct: 481 HRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALTLMGVQNN 540
Query: 361 LCTPKNGDILVASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKP 540
LCTPKNG+ILVASTQDFLTSSFLITR+DTFYDR F LMCSYMGD EHIDLPTPAILKP
Sbjct: 541 LCTPKNGEILVASTQDFLTSSFLITRRDTFYDRGQFALMCSYMGDAVEHIDLPTPAILKP 600
Query: 541 IELWTGKQLFSVLVRPNAKMRVFVNFIVMEKNYSKTGETMCPNDGCVYFRNSELISGQLG 720
+ELWTGKQLF VL+RP+A+++VF+NF+V EKN+ K ETMCP DG V+F+NSELI GQLG
Sbjct: 601 VELWTGKQLFGVLIRPSARIKVFLNFVVCEKNHKKGTETMCPKDGYVFFKNSELICGQLG 660
Query: 721 KATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLS----ARWIGNHGFSIGIDDVQPGA 888
K TLGNG+K GLF+VLLRDY AAASCMNRLAKL ARWIGNHGFSIGIDDVQPG+
Sbjct: 661 KGTLGNGSKDGLFTVLLRDYGEQAAASCMNRLAKLRHSYFARWIGNHGFSIGIDDVQPGS 720
Query: 889 RLTAKKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVC 1068
RLT +KE+R+ EGY CDKHI L+NKG+L LQPGC+AAQTLE+EITGELNKIRE AG VC
Sbjct: 721 RLTVEKEKRIAEGYRACDKHISLFNKGQLTLQPGCDAAQTLESEITGELNKIREAAGQVC 780
Query: 1069 LKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKK 1248
+ ELHWRNSPLIMSQCGSKGS INISQMIACVGQQSV G RAPNGFI+RSLPHFPRNDK
Sbjct: 781 VNELHWRNSPLIMSQCGSKGSVINISQMIACVGQQSVSGHRAPNGFIERSLPHFPRNDKT 840
Query: 1249 PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYD 1428
P AKGFVANSFY+GLTATEF FHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLS YD
Sbjct: 841 PQAKGFVANSFYSGLTATEFIFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSCQYD 900
Query: 1429 GTVRSANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSPALSVSELS 1608
GTVR+++ IVQ +YGDD+MDPV MEG++G PLNLDR+LMK KATCP +PAL SEL
Sbjct: 901 GTVRNSSGVIVQLIYGDDSMDPVSMEGQNGTPLNLDRVLMKAKATCPRGATPALPPSELW 960
Query: 1609 KRVDERLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNNDPDLAGLE 1788
K V+ + S Q + CS AF +SL FL K + TR L L E + D E
Sbjct: 961 KIVESKFS----QDGSECSMAFLDSLRKFLRKEFDTISSTRKRLSLPLEDFGNLD---DE 1013
Query: 1789 NIALDICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTFHFAG 1968
N+A ++ G T+RQLEVFL TCI RYH K+++ G AVGAIGAQSIGEPGTQMTLKTFHFAG
Sbjct: 1014 NVAANVSGLTSRQLEVFLNTCIGRYHRKKLDPGTAVGAIGAQSIGEPGTQMTLKTFHFAG 1073
Query: 1969 VASMNVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEVAKSI 2148
VASMN+TLGVPRIKEIINA+K ISTPIITAKL+S+NDVKAARIVKGRIEKT LG+VAKSI
Sbjct: 1074 VASMNITLGVPRIKEIINASKKISTPIITAKLVSENDVKAARIVKGRIEKTALGDVAKSI 1133
Query: 2149 KTVLKPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPK---LKIKQQNLRVLDHEKL 2319
K VL+P QAF+S+KLDM I SLQL+I A TVAE++LK PK +K+K+Q+++V D +
Sbjct: 1134 KIVLRPGQAFVSIKLDMDRIYSLQLDIRAETVAEAVLKFPKIKSMKLKEQHVKVNDDRSI 1193
Query: 2320 HIFPPEADRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDKGKYNLLVEGTNLAAVMG 2499
+ PE+DR K+ FALHSL+N LPKVIVKGI TVERAVINQ+KGKYNLLVEGTNL AVMG
Sbjct: 1194 SLTTPESDRKKMLFALHSLQNMLPKVIVKGIPTVERAVINQEKGKYNLLVEGTNLKAVMG 1253
Query: 2500 TQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDLRHMMLLADVMTFK 2679
T+GVDG T SNH+ E + LGIEAAR II EIQYTM SHGMSID RHMMLLADVMT++
Sbjct: 1254 TEGVDGRETTSNHIFETVEVLGIEAARNGIIKEIQYTMGSHGMSIDQRHMMLLADVMTYR 1313
Query: 2680 GQVLG 2694
G+ G
Sbjct: 1314 GEFWG 1318
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc1-like isoform X2 [Citrus sinensis]
Length = 1404
Score = 1312 bits (3395), Expect = 0.0
Identities = 679/993 (68%), Positives = 773/993 (77%), Gaps = 23/993 (2%)
Frame = +1
Query: 1 VSNGPQKYPGANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSL 180
+ NGP KYPGA I DG+ + + +LA ELK G IV+RHLEDGD+VLFNRQPSL
Sbjct: 411 IQNGPDKYPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSL 470
Query: 181 HRMSIMSHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNN 360
HRMSIM HRAR+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL LMG+QNN
Sbjct: 471 HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNN 530
Query: 361 LCTPKNGDILVASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKP 540
LCTPKNG+ILVASTQDFLTSSFLITRKDTFYDR AF LMC YMGDG + +DLPTPAILKP
Sbjct: 531 LCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKP 590
Query: 541 IELWTGKQLFSVLVRPNAKMRVFVNFIVMEKNYSKTG-----------ETMCPNDGCVYF 687
+ELWTGKQLFSVL+RP+A MRV+VN V EK YS ETMCPNDG VYF
Sbjct: 591 VELWTGKQLFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYF 650
Query: 688 RNSELISGQLGKATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGI 867
RNSELISGQLGKATLGNGNK GL+SVLLRDY A+A + CMNRLAKLSARWIGNHGFSIGI
Sbjct: 651 RNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHATSGCMNRLAKLSARWIGNHGFSIGI 710
Query: 868 DDVQPGARLTAKKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIR 1047
DDVQP L+ KK + ++E Y C+ I YN+GKL L+PGC+AAQTLEA IT LN+IR
Sbjct: 711 DDVQPKKELSDKKGKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRIR 770
Query: 1048 ELAGSVCLKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPH 1227
E AG C+ L WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAPNGFIDRSLPH
Sbjct: 771 EDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPH 830
Query: 1228 FPRNDKKPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALE 1407
FPR K+PAAKGFVANSFY+GL+ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+KALE
Sbjct: 831 FPRKAKEPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALE 890
Query: 1408 DLSTHYDGTVRSANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSPA 1587
DLS YD +VR+A IVQFLYGDD MDP +MEGK GEPLN DRLLMK KATCP G
Sbjct: 891 DLSIQYDNSVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRY 950
Query: 1588 LSVSELSKRVDERLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNND 1767
LS ++S+ V+++L+ Y + CS AF NSL F E + K + E+ D
Sbjct: 951 LSPQQVSEIVEKQLAAYGKE---SCSEAFLNSLRKFFEGQQDKLDK---KIKFVEDIGWD 1004
Query: 1768 PDLAGLENIALDICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTL 1947
LE + G T +QLEVF++TC RYH KR+EAG A+GAIGAQSIGEPGTQMTL
Sbjct: 1005 DKSQILEEVTHKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIGEPGTQMTL 1064
Query: 1948 KTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVL 2127
KTFHFAGVASMN+T GVPRIKEIIN AK ISTPIITA+L +++ AAR+VKGRIEKT+L
Sbjct: 1065 KTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGRIEKTLL 1124
Query: 2128 GEVAKSIKTVLKPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLD 2307
G+VAKSIK V+ A I + LDM I+ L I A V ESI++TPK+K+KQQ+++VLD
Sbjct: 1125 GQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINADIVKESIVQTPKIKLKQQHIKVLD 1184
Query: 2308 HEKLHIFPPEADRLKIYFALHSLRNKLPKVIVKGISTVERAVI------------NQDKG 2451
KL IFPP D+ KI+F L+SL+N LP VIVKGI TVER VI N +K
Sbjct: 1185 FRKLEIFPP-VDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKENGEKK 1243
Query: 2452 KYNLLVEGTNLAAVMGTQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMS 2631
KY LLVEGT L AVMG +G+DG TKSNH+ E++QTLGIEAAR CIIDEI TM +HGMS
Sbjct: 1244 KYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMS 1303
Query: 2632 IDLRHMMLLADVMTFKGQVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIE 2811
ID RHMMLLAD+MTF+G+VLGITRFGI KM SVLMLASFEKT DHLF+ASV+GR D+IE
Sbjct: 1304 IDKRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIE 1363
Query: 2812 GVSECXXXXXXXXXXTGLLKVRQRVDHLPKLEY 2910
GVSEC TG+LK+RQR P L+Y
Sbjct: 1364 GVSECIIMGIPMPLGTGILKIRQRDAVPPMLKY 1396
>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1392
Score = 1310 bits (3389), Expect = 0.0
Identities = 667/994 (67%), Positives = 784/994 (78%), Gaps = 20/994 (2%)
Frame = +1
Query: 1 VSNGPQKYPGANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSL 180
+ NGP K+PGAN++ DG++ +++ + R A +LKYG IVERHLEDGDIVLFNRQPSL
Sbjct: 397 IRNGPHKHPGANFVTQPDGTKLHLKYCDRRIAARDLKYGCIVERHLEDGDIVLFNRQPSL 456
Query: 181 HRMSIMSHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNN 360
HRMSIMSHRAR+MPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL LMG+QNN
Sbjct: 457 HRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNN 516
Query: 361 LCTPKNGDILVASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKP 540
LCTPKNG+ILVASTQDFLTSSFLITRKD FYDR F L+CSY+GD E+IDLPTPAI+KP
Sbjct: 517 LCTPKNGEILVASTQDFLTSSFLITRKDNFYDRSYFTLLCSYLGDAMENIDLPTPAIIKP 576
Query: 541 IELWTGKQLFSVLVRPNAKMRVFVNFIVMEKNYSK-----------TGETMCPNDGCVYF 687
+ELWTGKQLFSVLVRPNA +V++N V EK Y K ETMCPNDG VYF
Sbjct: 577 LELWTGKQLFSVLVRPNACTKVYLNLTVEEKIYMKRRERDKNAVSVLEETMCPNDGYVYF 636
Query: 688 RNSELISGQLGKATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGI 867
RNSEL+SGQ+GK TLGNGNK G+FSVL+RDYN++AAASCMNRLAK SAR+IGNHGFSIG+
Sbjct: 637 RNSELLSGQVGKKTLGNGNKDGMFSVLVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGV 696
Query: 868 DDVQPGARLTAKKEERVTEGYNKCDKHIDLYNKGK--LNLQPGCNAAQTLEAEITGELNK 1041
DDVQPG L KK++ + +GY +C I +Y+KG L PGCN AQTLE ++ LN+
Sbjct: 697 DDVQPGESLNQKKKKTIDQGYTECHDLIAVYSKGAPGAELHPGCNRAQTLEVRVSAILNQ 756
Query: 1042 IRELAGSVCLKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSL 1221
+RE AG C+ LHWRNSPLIMSQCGSKGSPINISQM+ CVGQQSVGGRRAP+GFIDR+L
Sbjct: 757 LREKAGEHCMNTLHWRNSPLIMSQCGSKGSPINISQMVVCVGQQSVGGRRAPDGFIDRTL 816
Query: 1222 PHFPRNDKKPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKA 1401
PHFP + K PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK
Sbjct: 817 PHFPIHSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKG 876
Query: 1402 LEDLSTHYDGTVRSANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGS 1581
LEDLS YD TVR+A+S IVQF+YGDD MDPV MEGK G PLNLD+L MK KATCP G
Sbjct: 877 LEDLSVFYDQTVRNASSGIVQFVYGDDGMDPVKMEGKGGSPLNLDQLFMKVKATCPQRGH 936
Query: 1582 PALSVSELSKRVDERLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKN 1761
LS + + ++++LS+ DM GCS F+ L F E I ++ TR TL L E+
Sbjct: 937 DMLSPEAIMQMLNDKLSEQDMS-SGGCSDKFKELLTKFFEDRIKMLRSTRRTLHLDEDHV 995
Query: 1762 NDPDLAGLENIALDICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQM 1941
D + E IA +I G +A+QL+VFL+TC+ RYHSK +EAGA++GAIGAQSIGEPGTQM
Sbjct: 996 GMKDSSIEERIAANISGISAKQLQVFLDTCLSRYHSKIIEAGASIGAIGAQSIGEPGTQM 1055
Query: 1942 TLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKT 2121
TLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITA+L+S D+ A VK +EK
Sbjct: 1056 TLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITAELLSGQDMSFAVKVKRYVEKV 1115
Query: 2122 VLGEVAKSIKTVLKPLQAFISVKLDMRIIESL-QLEITAYTVAESILKTPKLKIKQQNLR 2298
VLGEVA IK VLK Q + VKLDM+ IE+ + I++ +V +SI++ PK+K+K +++R
Sbjct: 1116 VLGEVAAVIKIVLKSSQPNLVVKLDMQRIEAQGYMGISSDSVQQSIIRHPKIKLKSEHVR 1175
Query: 2299 VLDHEKLHIFPPEADRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDK------GKYN 2460
V+D KL I+P D+ K+ LH+L++ LPKVIVKGI TVERAV+N K +YN
Sbjct: 1176 VIDGAKLRIYPTGTDKSKLQLELHTLKSMLPKVIVKGIPTVERAVVNPVKRPDKTLDRYN 1235
Query: 2461 LLVEGTNLAAVMGTQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMSIDL 2640
LLVEGTNL V+GT GVD TKSNH++E+ QTLGIEAAR+ IIDEI+YT S+ M ID
Sbjct: 1236 LLVEGTNLLKVLGTPGVDAKKTKSNHIMEVNQTLGIEAARRSIIDEIRYTFESNNMIIDQ 1295
Query: 2641 RHMMLLADVMTFKGQVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIEGVS 2820
RHMMLLAD+MT+KG+VLGITRFGI KMK SVLMLASFEKT +HLF+AS GR D+IEGVS
Sbjct: 1296 RHMMLLADLMTYKGEVLGITRFGIVKMKSSVLMLASFEKTLEHLFNASYSGREDEIEGVS 1355
Query: 2821 ECXXXXXXXXXXTGLLKVRQRVDHLPKLEYAPSS 2922
EC +G+LKVRQR+DHLP+ Y P +
Sbjct: 1356 ECIIMGIPMTLGSGILKVRQRLDHLPEFNYQPDA 1389
>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
Length = 1395
Score = 1308 bits (3385), Expect = 0.0
Identities = 677/996 (67%), Positives = 777/996 (78%), Gaps = 24/996 (2%)
Frame = +1
Query: 1 VSNGPQKYPGANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSL 180
V NGP KYPGA + DGS + + +RLA ELK+G +V+RHLEDGDIVLFNRQPSL
Sbjct: 404 VRNGPSKYPGARMVRYPDGSARLLIGDYRKRLADELKFGCVVDRHLEDGDIVLFNRQPSL 463
Query: 181 HRMSIMSHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNN 360
HRMSIM HRAR+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL LMG+QNN
Sbjct: 464 HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNN 523
Query: 361 LCTPKNGDILVASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKP 540
LCTPKNG+ILVASTQDFLTSSFLITRKD FYDR AF L+CSYMGDG + IDLPTPA+LKP
Sbjct: 524 LCTPKNGEILVASTQDFLTSSFLITRKDIFYDRAAFSLICSYMGDGMDLIDLPTPALLKP 583
Query: 541 IELWTGKQLFSVLVRPNAKMRVFVNFIVMEKNYSKT-----------GETMCPNDGCVYF 687
IELWTGKQLFSVL+RP+A +RV++N IV E+NYSK ETMCP+DG VY
Sbjct: 584 IELWTGKQLFSVLLRPHASVRVYLNLIVKERNYSKKIIKRIGNKEIEVETMCPDDGFVYI 643
Query: 688 RNSELISGQLGKATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGI 867
RNSELI GQLGKATLGNGNK GL+SVLLRDYNA+AAA+CMNRLAKLSARWIGNHGFSIGI
Sbjct: 644 RNSELICGQLGKATLGNGNKDGLYSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGI 703
Query: 868 DDVQPGARLTAKKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIR 1047
DDVQPG RL +K ++ Y KCD+ I +N+GKL +PG +AAQTLEA +T LN IR
Sbjct: 704 DDVQPGKRLNDEKALTISGDYKKCDEEIQTFNEGKLKPKPGYDAAQTLEANVTAILNNIR 763
Query: 1048 ELAGSVCLKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPH 1227
+ G VC+KELHWRNSPLIMSQCGSKGS INISQMIACVGQQSVGGRRAPNGFIDRSLPH
Sbjct: 764 DKTGKVCMKELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRSLPH 823
Query: 1228 FPRNDKKPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALE 1407
F R K PAAKGFVANSFY+GLTATEFFFHTM GREGLVDTAVKTAETGYMSRRL+KALE
Sbjct: 824 FHRGSKTPAAKGFVANSFYSGLTATEFFFHTMAGREGLVDTAVKTAETGYMSRRLIKALE 883
Query: 1408 DLSTHYDGTVRSANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSPA 1587
DLS HYD TVR+A+ IVQF+YGDD MDP MEGK G PLN DRLLMK KATCP
Sbjct: 884 DLSIHYDNTVRNASGCIVQFIYGDDGMDPACMEGKSGFPLNFDRLLMKVKATCPPIEQKC 943
Query: 1588 LSVSELSKRVDERLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNND 1767
L V + + ++E+L+K+D P CS AF+ SL FL+ + + + + +K+
Sbjct: 944 LHVGSIMQMLEEQLAKHD--PAGVCSEAFKKSLKGFLKSQTNELDRVMKLVNNCAQKSEI 1001
Query: 1768 PDLAGLENIALDICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTL 1947
LE + I G + RQLEVF+ TCI RY SK +EAG A+GAIGAQSIGEPGTQMTL
Sbjct: 1002 -----LEKVGHKISGISDRQLEVFVSTCISRYRSKVIEAGTAIGAIGAQSIGEPGTQMTL 1056
Query: 1948 KTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVL 2127
KTFHFAGVASMN+T GVPRIKEIINAAK ISTP+ITA+L D++ A+IVKGRIEKTVL
Sbjct: 1057 KTFHFAGVASMNITQGVPRIKEIINAAKRISTPVITAELEFDDNPNIAQIVKGRIEKTVL 1116
Query: 2128 GEVAKSIKTVLKPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLD 2307
G+VAKSIK V+ A + + LDM II +L I A V ESIL+TPK+K+K+Q+++VLD
Sbjct: 1117 GQVAKSIKIVITSRSASVVITLDMEIILDAELYIDANIVKESILQTPKIKLKEQHVKVLD 1176
Query: 2308 HEKLHIFPPEADRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDKGK----------- 2454
KL + PP ADR +I+F LHSL+N LP V+VKGI TVER V+ DK K
Sbjct: 1177 GRKLEVVPP-ADRSQIHFELHSLKNLLPLVVVKGIKTVERTVV-YDKNKEKKNQKEEETT 1234
Query: 2455 --YNLLVEGTNLAAVMGTQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGM 2628
+ LLVEGT L AVMG +G+DG T SNHV+E+EQ LGIEAARKCIIDEI TM HGM
Sbjct: 1235 KHFQLLVEGTGLQAVMGIEGIDGRRTWSNHVMEMEQILGIEAARKCIIDEIAQTMEHHGM 1294
Query: 2629 SIDLRHMMLLADVMTFKGQVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQI 2808
+ID RHMMLLADVMTF+G+VLGITRFGI KM S+LMLASFE+T DHLF+A+V+GR D+I
Sbjct: 1295 TIDRRHMMLLADVMTFRGEVLGITRFGIQKMDKSILMLASFERTADHLFNAAVNGRDDKI 1354
Query: 2809 EGVSECXXXXXXXXXXTGLLKVRQRVDHLPKLEYAP 2916
EGV+EC TG+LKV QRVD P L Y P
Sbjct: 1355 EGVTECIIMGIPMQIGTGILKVIQRVDPPPMLRYGP 1390
>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
polymerase III largest subunit, putative [Ricinus
communis]
Length = 1383
Score = 1300 bits (3364), Expect = 0.0
Identities = 674/1002 (67%), Positives = 782/1002 (78%), Gaps = 28/1002 (2%)
Frame = +1
Query: 1 VSNGPQKYPGANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSL 180
VSNGPQKYPGA+ + DGS + + + +A EL +G IV+RHLEDGD+VLFNRQPSL
Sbjct: 380 VSNGPQKYPGASTVRYPDGSSKRLIGSYRKTIAEELTFGCIVDRHLEDGDVVLFNRQPSL 439
Query: 181 HRMSIMSHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGI-QN 357
HRMSIM HRAR+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL LMG+ QN
Sbjct: 440 HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVSQN 499
Query: 358 NLCTPKNGDILVASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILK 537
NLCTPKNG+ILVASTQDFLTSSFLITR+DTFYDR AF LMCSYM DG + IDLPTPAILK
Sbjct: 500 NLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRAAFSLMCSYMNDGMDLIDLPTPAILK 559
Query: 538 PIELWTGKQLFSVLVRPNAKMRVFVNFIVMEKNYSKTG-------ETMCPNDGCVYFRNS 696
PIELWTGKQLFSVL+RPNA +RV+VN IV EK YSK ETMCPNDG VY RNS
Sbjct: 560 PIELWTGKQLFSVLLRPNANVRVYVNLIVREKIYSKPKKGDKREKETMCPNDGFVYIRNS 619
Query: 697 ELISGQLGKATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLS--ARWIGNHGFSIGID 870
ELISGQLGKATLGNGNK GL+S+LLRDYN +AAA+CMNRLAKL ARWIGNHGFSIGID
Sbjct: 620 ELISGQLGKATLGNGNKDGLYSILLRDYNPHAAATCMNRLAKLRQVARWIGNHGFSIGID 679
Query: 871 DVQPGARLTAKKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRE 1050
DVQPG +L K + ++ GY +CDK I+ YN+GKL L+PGC+A QTLE+EIT +LNK+RE
Sbjct: 680 DVQPGKKLIDGKGKTISNGYQQCDKLIEQYNEGKLLLKPGCDATQTLESEITEKLNKLRE 739
Query: 1051 LAGSVCLKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHF 1230
AG VC+KELHWRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GFIDRSLPHF
Sbjct: 740 EAGDVCMKELHWRNSPLIMSQCGSKGSVINISQMVACVGQQSVGGRRAPDGFIDRSLPHF 799
Query: 1231 PRNDKKPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALED 1410
PR K PAAKGFVANSFY+GL ATEFFFHTM GREGLVDTAVKTA+TGYMSRRL+K LED
Sbjct: 800 PRKSKTPAAKGFVANSFYSGLMATEFFFHTMAGREGLVDTAVKTADTGYMSRRLIKGLED 859
Query: 1411 LSTHYDGTVRSANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSPAL 1590
LS YD TVR+A+ IVQFLYGDD +DP MEGK G PLNLDRL K KATCP L
Sbjct: 860 LSIQYDNTVRNASGCIVQFLYGDDGLDPASMEGKGGVPLNLDRLFSKVKATCPVREEDYL 919
Query: 1591 SVSELSKRVDERLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKK-TRLTLGLSEEKNND 1767
S ++S V+ L K+DM CS AF+ SL +FL + ++ +L G+ + + +
Sbjct: 920 SPLDISDVVENLLLKHDMALGGICSEAFKKSLTSFLGSHAKRLESMMKLADGVEDPTSEN 979
Query: 1768 PDLAG-------LENIALDICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGE 1926
G +E +A I G + RQ+EVF++TCI RY KR+E G A+GAIGAQSIGE
Sbjct: 980 IQTGGIRGNSKIIERLAHKIFGVSERQIEVFVKTCINRYLWKRVEPGTAIGAIGAQSIGE 1039
Query: 1927 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKG 2106
PGTQMTLKTFHFAGVASMN+T GVPRIKEIIN AK ISTPIITA+L + +V AARI KG
Sbjct: 1040 PGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKKISTPIITAELEQNTNVTAARIAKG 1099
Query: 2107 RIEKTVLGEVAKSIKTVLKPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQ 2286
RI+KTVLG+VAKSIK V+ A + + LDM+ I++ QL + A V E+IL+TP++K+K
Sbjct: 1100 RIQKTVLGQVAKSIKIVMTSRSASVVITLDMKTIQNAQLSLDANIVKEAILRTPRIKLKP 1159
Query: 2287 QNLRVLDHEKLHIFPPEADRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDK--GK-- 2454
Q+++VLD KL + P DR +++F LH+L+N LP +IV+GI TVERAVI Q K GK
Sbjct: 1160 QHIKVLDTRKLEVI-PLGDRERVHFELHNLKNLLPSIIVQGIKTVERAVIAQKKHDGKAN 1218
Query: 2455 ------YNLLVEGTNLAAVMGTQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMA 2616
YN+LVEG L VMGT+GVDG T SNHV+E+++ LGIEAARKCIIDEI TM
Sbjct: 1219 DQELPTYNMLVEGMGLDLVMGTEGVDGCKTTSNHVMEVQKFLGIEAARKCIIDEINQTME 1278
Query: 2617 SHGMSIDLRHMMLLADVMTFKGQVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGR 2796
HGMSID+RHMMLL D+MTFKG+VLGITRFGI KM SVLMLASFEKT DHL+ A+V GR
Sbjct: 1279 HHGMSIDIRHMMLLGDLMTFKGEVLGITRFGIQKMDKSVLMLASFEKTADHLYHAAVFGR 1338
Query: 2797 VDQIEGVSECXXXXXXXXXXTGLLKVRQRVDHLPKLEYAPSS 2922
D+IEGVSEC TG+LKV+QRVD P L Y S
Sbjct: 1339 DDKIEGVSECIIMGIPMQIGTGILKVQQRVDPPPVLNYGSDS 1380
>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1394
Score = 1295 bits (3350), Expect = 0.0
Identities = 671/987 (67%), Positives = 768/987 (77%), Gaps = 26/987 (2%)
Frame = +1
Query: 1 VSNGPQKYPGANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSL 180
V+NG KYPGA + DGS + + +R+A ELK G IV RHLEDGD+VLFNRQPSL
Sbjct: 409 VNNGSYKYPGARMVTYPDGSSKMLTGNYRKRIAEELKSGCIVHRHLEDGDVVLFNRQPSL 468
Query: 181 HRMSIMSHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNN 360
HRMSIM HRAR+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA LMG+QNN
Sbjct: 469 HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAFLLMGVQNN 528
Query: 361 LCTPKNGDILVASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKP 540
LCTPKNG+ILVASTQDFLTSSFLITRKDTFYDR AF LMCSYM DG + +DLPTP++LKP
Sbjct: 529 LCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMNDGMDLVDLPTPSVLKP 588
Query: 541 IELWTGKQLFSVLVRPNAKMRVFVNFIVMEKNYS-------KTGETMCPNDGCVYFRNSE 699
IELWTGKQLFSVL+RP+A +RV+VN I+ EKNYS K ETMCPNDG VYFRNSE
Sbjct: 589 IELWTGKQLFSVLLRPHANVRVYVNLILKEKNYSRPNKEHKKERETMCPNDGYVYFRNSE 648
Query: 700 LISGQLGKATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQ 879
LISGQLGKATLGNGNK GL+S+LLRDYNAYAAA+CMNRLAKLSARWIGNHGFSIGIDDVQ
Sbjct: 649 LISGQLGKATLGNGNKDGLYSILLRDYNAYAAATCMNRLAKLSARWIGNHGFSIGIDDVQ 708
Query: 880 PGARLTAKKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAG 1059
PG +L +K + ++ GY C+K I YN G+L L+ GC+A QTLE EIT LNK+RE AG
Sbjct: 709 PGKKLIDEKGKTISNGYRHCNKLIADYNGGRLALKSGCDATQTLETEITERLNKLREEAG 768
Query: 1060 SVCLKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRN 1239
VC+KELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGG RAP+GFIDRSLPHFPR
Sbjct: 769 DVCMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGSRAPDGFIDRSLPHFPRK 828
Query: 1240 DKKPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLST 1419
K PAAKGFVANSFY+GL+ATEFFFHTMGGREGLVDTAVKTA+TGYM+RRL K LEDL
Sbjct: 829 SKTPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMARRLSKGLEDLCV 888
Query: 1420 HYDGTVRSANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSPALSVS 1599
YD TV+ A IVQFLYGDD +DP MEGK G PLN DRL MK KATC A LS S
Sbjct: 889 QYDNTVQDAGGGIVQFLYGDDGLDPAIMEGKAGVPLNFDRLFMKVKATCGAEEDEYLSPS 948
Query: 1600 ELSKRVDERLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVK-KTRLTLGLSEEK-NNDPD 1773
++S V L K++ + CS +FR SL +FL ++ +L G+ E N +
Sbjct: 949 DISNIVQSLLLKHNGTLDGICSESFRKSLSSFLGDQAKRLECLMKLVDGVEVENFENIKN 1008
Query: 1774 LAGL-------ENIALDICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPG 1932
+ GL E IA + G T +QLEVFL+TC+ RY KR+E G A+GAIGAQSIGEPG
Sbjct: 1009 VEGLTGISKNTEKIAQKVSGITEKQLEVFLKTCLDRYVWKRIEPGTAIGAIGAQSIGEPG 1068
Query: 1933 TQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRI 2112
TQMTLKTFHFAGVASMN+T GVPRIKEIIN AK ISTPIIT +L +++V AARI+KGRI
Sbjct: 1069 TQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITVELEHNSNVNAARIIKGRI 1128
Query: 2113 EKTVLGEVAKSIKTVLKPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQN 2292
+KTVLG+VAKSIK V+ A + V LDM+ I QL + A V E IL+TPK+K K Q
Sbjct: 1129 QKTVLGQVAKSIKIVMTSRSASVKVTLDMKTIREAQLSLDANIVRELILETPKIKRKLQR 1188
Query: 2293 LRVLDHEKLHIFPPEADRLKIYFALHSLRNKLPKVIVKGISTVERAVINQDK-------- 2448
+ VL+ KL +F P DR K++F LHSL+N LP V+VKGI TVER VI Q K
Sbjct: 1189 INVLEDGKLEVF-PGGDRNKLHFELHSLKNMLPAVVVKGIKTVERVVIAQKKLDDAENDQ 1247
Query: 2449 --GKYNLLVEGTNLAAVMGTQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASH 2622
KYN+ VEG L AVMGT+GVDG TKSNH+IE+++TLGIEAARKCIIDEI+ TM SH
Sbjct: 1248 GGPKYNMFVEGMGLQAVMGTEGVDGRKTKSNHIIEVQETLGIEAARKCIIDEIKGTMESH 1307
Query: 2623 GMSIDLRHMMLLADVMTFKGQVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVD 2802
GMSID+RHMMLLADVMT +G VLGITRFGI KM SVLMLASFEKT+DHLF+ASV G+ D
Sbjct: 1308 GMSIDIRHMMLLADVMTSRGVVLGITRFGIQKMDKSVLMLASFEKTSDHLFNASVKGKDD 1367
Query: 2803 QIEGVSECXXXXXXXXXXTGLLKVRQR 2883
+IEGVSEC TG+LK++QR
Sbjct: 1368 KIEGVSECIIMGIPVAIGTGVLKIQQR 1394
>ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Fragaria vesca subsp. vesca]
Length = 1390
Score = 1291 bits (3342), Expect = 0.0
Identities = 651/988 (65%), Positives = 772/988 (78%), Gaps = 23/988 (2%)
Frame = +1
Query: 1 VSNGPQKYPGANYIISMDGSRQSIRHGNPRRLAAE-LKYGSIVERHLEDGDIVLFNRQPS 177
V+NGP KYPGA + +G S++ G R A+ LK G IV+RHLEDGDIVLFNRQPS
Sbjct: 403 VANGPFKYPGALVLKCQNGEEWSLKAGQKRMSHADNLKPGDIVDRHLEDGDIVLFNRQPS 462
Query: 178 LHRMSIMSHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQN 357
LHRMSIM HRAR+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA+ LMG+QN
Sbjct: 463 LHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAVMLMGVQN 522
Query: 358 NLCTPKNGDILVASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILK 537
NLCTPKNG+ILVASTQDFLTSSFLITRKDTFYDR +F LMCSYMGDG+EH+DLPTPA++K
Sbjct: 523 NLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRASFSLMCSYMGDGTEHVDLPTPAVVK 582
Query: 538 PIELWTGKQLFSVLVRPNAKMRVFVNFIVMEKNYSKTG-------ETMCPNDGCVYFRNS 696
PIELWTGKQL+SVLVRPN+ +RV++N V EK+YS E MCPNDG VYFRNS
Sbjct: 583 PIELWTGKQLYSVLVRPNSNVRVYLNLTVREKSYSNRKTEDGREIEAMCPNDGFVYFRNS 642
Query: 697 ELISGQLGKATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDV 876
EL+SGQLGK TLGNGNK GLFSVLLRDY A+AAASCMNR+AKLSARWIGNHGFSIGI DV
Sbjct: 643 ELLSGQLGKGTLGNGNKDGLFSVLLRDYKAHAAASCMNRVAKLSARWIGNHGFSIGISDV 702
Query: 877 QPGARLTAKKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELA 1056
QP L +KE+ + +GY+KCD I LY +G+L L PGC+AAQ+LE+ IT LN IR+
Sbjct: 703 QPSDILYGEKEKIIKKGYDKCDDQIKLYKEGQLRLAPGCDAAQSLESGITAVLNDIRDQT 762
Query: 1057 GSVCLKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPR 1236
G +C++ LHWRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAPNGFIDRSLPHFPR
Sbjct: 763 GKLCMQTLHWRNSPLIMSQCGSKGSAINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPR 822
Query: 1237 NDKKPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLS 1416
PAAKGFVA+SFY+GLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL K LEDLS
Sbjct: 823 KVNTPAAKGFVASSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLSKVLEDLS 882
Query: 1417 THYDGTVRSANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSPALSV 1596
YD TVR+AN IVQF YGDD MDP MEGK G PL+ RL + KATCPA S +LS
Sbjct: 883 VQYDKTVRAANGGIVQFCYGDDGMDPAMMEGKSGAPLDFYRLFFRAKATCPAGESESLSP 942
Query: 1597 SELSKRVDERLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNNDPDL 1776
E+S+ V RLS+ DM P+ GCS F++S+ FL++Y+ ++KT+ L++ +
Sbjct: 943 DEVSEIVRSRLSEQDMTPDGGCSMGFKSSIEQFLDEYVKALRKTQEAFLLNQSPGWEVKS 1002
Query: 1777 AGLENIALDICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTLKTF 1956
A L+NI +I G T RQL+VFL+TCI RYHSK+++AG A+G IGAQSIGEPGTQMTLKTF
Sbjct: 1003 ATLQNIVQNISGVTPRQLKVFLDTCISRYHSKKVDAGTAIGVIGAQSIGEPGTQMTLKTF 1062
Query: 1957 HFAGVASMNVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVLGEV 2136
HFAGVASMNVTLGVPRIKEIIN AKNI TPIIT L DN+ AR+V GRIEKT LG+V
Sbjct: 1063 HFAGVASMNVTLGVPRIKEIINGAKNIHTPIITTVLECDNNPMIARMVAGRIEKTNLGQV 1122
Query: 2137 AKSIKTVLKPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLDHEK 2316
A+ I+ V+ P A++ VKLDM +I+ L I A V +SIL TP++K+K +++RV D++
Sbjct: 1123 AECIEIVMSPRAAYVEVKLDMAVIQDAHLSIDANVVKQSILGTPRIKLKHEHIRVPDNQT 1182
Query: 2317 LHIFPPEADRLKIYFALHSLRNKLPKVIVKGISTVERAVINQ---------------DKG 2451
+ + E DR K++F L+ L++ LP VIV+GI T+ER VI++ D+
Sbjct: 1183 VEVHSHEKDRRKLHFHLYYLKSILPNVIVRGIKTIERVVIDEEKVKRDKKDIDIKCGDEK 1242
Query: 2452 KYNLLVEGTNLAAVMGTQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMS 2631
KY L EG L AVM T+GVDG T SN +IE++QTLGIEAAR CII+EI+YTM SHGM+
Sbjct: 1243 KYKLFAEGKGLLAVMSTKGVDGCKTTSNDIIEVQQTLGIEAARTCIIEEIKYTMKSHGMN 1302
Query: 2632 IDLRHMMLLADVMTFKGQVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIE 2811
ID RHMMLLADVMTF+G VLGITRFG+ +M SVLMLASFE+T DHLF+ASV G VD+IE
Sbjct: 1303 IDDRHMMLLADVMTFRGLVLGITRFGVQQMGKSVLMLASFERTDDHLFNASVQGTVDKIE 1362
Query: 2812 GVSECXXXXXXXXXXTGLLKVRQRVDHL 2895
GVSE TG+ K++QR+ +
Sbjct: 1363 GVSESIIMGIPMPIGTGMFKIKQRLPEM 1390
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 1268 bits (3281), Expect = 0.0
Identities = 664/993 (66%), Positives = 755/993 (76%), Gaps = 23/993 (2%)
Frame = +1
Query: 1 VSNGPQKYPGANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSL 180
+ NGP KYPGA I DG+ + + +LA ELK G IV+RHLEDGD+VLFNRQPSL
Sbjct: 426 IQNGPDKYPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSL 485
Query: 181 HRMSIMSHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNN 360
HRMSIM HRAR+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL LMG+QNN
Sbjct: 486 HRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNN 545
Query: 361 LCTPKNGDILVASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKP 540
LCTPKNG+ILVASTQDFLTSSFLITRKDTFYDR AF LMC YMGDG + +DLPTPAILKP
Sbjct: 546 LCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKP 605
Query: 541 IELWTGKQLFSVLVRPNAKMRVFVNFIVMEKNYSKTG-----------ETMCPNDGCVYF 687
+ELWTGKQLFSVL+RP+A MRV+VN V EK YS ETMCPNDG VYF
Sbjct: 606 VELWTGKQLFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYF 665
Query: 688 RNSELISGQLGKATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGI 867
RNSELISGQLGKATLG CMNRLAKLSARWIGNHGFSIGI
Sbjct: 666 RNSELISGQLGKATLG----------------------CMNRLAKLSARWIGNHGFSIGI 703
Query: 868 DDVQPGARLTAKKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIR 1047
DDVQP L+ KK + ++E Y C+ I YN+GKL L+PGC+AAQTLEA IT LN+IR
Sbjct: 704 DDVQPKKELSDKKGKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRIR 763
Query: 1048 ELAGSVCLKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPH 1227
E AG C+ L WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAPNGFIDRSLPH
Sbjct: 764 EDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPH 823
Query: 1228 FPRNDKKPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALE 1407
FPR K+PAAKGFVANSFY+GL+ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+KALE
Sbjct: 824 FPRKAKEPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALE 883
Query: 1408 DLSTHYDGTVRSANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSPA 1587
DLS YD +VR+A IVQFLYGDD MDP +MEGK GEPLN DRLLMK KATCP G
Sbjct: 884 DLSIQYDNSVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRY 943
Query: 1588 LSVSELSKRVDERLSKYDMQPEAGCSAAFRNSLFNFLEKYISNVKKTRLTLGLSEEKNND 1767
LS ++S+ V+++L+ Y + CS AF NSL F E + K + E+ D
Sbjct: 944 LSPQQVSEIVEKQLAAYGKE---SCSEAFLNSLRKFFEGQQDKLDK---KIKFVEDIGWD 997
Query: 1768 PDLAGLENIALDICGFTARQLEVFLETCIKRYHSKRMEAGAAVGAIGAQSIGEPGTQMTL 1947
LE + G T +QLEVF++TC RYH KR+EAG A+GAIGAQSIGEPGTQMTL
Sbjct: 998 DKSQILEEVTHKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIGEPGTQMTL 1057
Query: 1948 KTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITAKLISDNDVKAARIVKGRIEKTVL 2127
KTFHFAGVASMN+T GVPRIKEIIN AK ISTPIITA+L +++ AAR+VKGRIEKT+L
Sbjct: 1058 KTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGRIEKTLL 1117
Query: 2128 GEVAKSIKTVLKPLQAFISVKLDMRIIESLQLEITAYTVAESILKTPKLKIKQQNLRVLD 2307
G+VAKSIK V+ A I + LDM I+ L I A V ESI++TPK+K+KQQ+++VLD
Sbjct: 1118 GQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINADIVKESIVQTPKIKLKQQHIKVLD 1177
Query: 2308 HEKLHIFPPEADRLKIYFALHSLRNKLPKVIVKGISTVERAVI------------NQDKG 2451
KL IFPP D+ KI+F L+SL+N LP VIVKGI TVER VI N +K
Sbjct: 1178 FRKLEIFPP-VDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKENGEKK 1236
Query: 2452 KYNLLVEGTNLAAVMGTQGVDGINTKSNHVIEIEQTLGIEAARKCIIDEIQYTMASHGMS 2631
KY LLVEGT L AVMG +G+DG TKSNH+ E++QTLGIEAAR CIIDEI TM +HGMS
Sbjct: 1237 KYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMS 1296
Query: 2632 IDLRHMMLLADVMTFKGQVLGITRFGIAKMKDSVLMLASFEKTTDHLFDASVHGRVDQIE 2811
ID RHMMLLAD+MTF+G+VLGITRFGI KM SVLMLASFEKT DHLF+ASV+GR D+IE
Sbjct: 1297 IDKRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIE 1356
Query: 2812 GVSECXXXXXXXXXXTGLLKVRQRVDHLPKLEY 2910
GVSEC TG+LK+RQR P L+Y
Sbjct: 1357 GVSECIIMGIPMPLGTGILKIRQRDAVPPMLKY 1389