BLASTX nr result
ID: Ephedra27_contig00014147
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00014147
(1546 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY05582.1| P-loop containing nucleoside triphosphate hydrola... 504 e-140
ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 500 e-139
ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Popu... 500 e-139
sp|Q0JFN7.2|RH58_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA ... 499 e-138
ref|XP_004951318.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 497 e-138
ref|XP_006836561.1| hypothetical protein AMTR_s00131p00060240 [A... 497 e-138
ref|XP_006646732.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 496 e-137
gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus not... 494 e-137
emb|CBI26203.3| unnamed protein product [Vitis vinifera] 493 e-137
ref|XP_004134454.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 491 e-136
gb|EMJ24082.1| hypothetical protein PRUPE_ppa005191mg [Prunus pe... 491 e-136
ref|XP_006489326.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 489 e-135
ref|XP_006419853.1| hypothetical protein CICLE_v10004897mg [Citr... 486 e-134
gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL i... 485 e-134
ref|NP_001147746.1| ATP binding protein [Zea mays] gi|195613438|... 485 e-134
ref|XP_003565158.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 484 e-134
ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putativ... 484 e-134
ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 483 e-134
ref|XP_003528676.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 483 e-133
gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' ... 482 e-133
>gb|EOY05582.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 1 [Theobroma cacao]
Length = 477
Score = 504 bits (1297), Expect = e-140
Identities = 248/452 (54%), Positives = 347/452 (76%), Gaps = 2/452 (0%)
Frame = +1
Query: 76 LQSRN-YLRFPKLFKPLSIKCTSTKSTLKIDAINDSDSSAQNKTLREICKDKVPHHILNR 252
LQ RN YL + S+ ++ + + +++ + TLREIC+D VP H+L R
Sbjct: 29 LQPRNRYLNLSSSANFSAKALFSSYNSNSVPLTKELETNCNSLTLREICQDHVPDHVLGR 88
Query: 253 VEELGFLIPTDVQEQSLPIILSGSDCILQAQTGSGKTLAYLLPIFASITGRRASVQAVIV 432
+EELG+++PTDVQ ++LP++ SG+DCIL AQTGSGKTL YLL I++ I +R++VQA+IV
Sbjct: 89 MEELGYVMPTDVQREALPVLFSGNDCILHAQTGSGKTLTYLLLIYSVINPKRSAVQALIV 148
Query: 433 VPTRELGMQVAKVARAVASPSNEGKLEKQNVISIMALLDGGTLKRQSTWLRAEPPQLVVA 612
VPTRELGMQV KVAR +A+ + ++E+++ ++MALLDGG L+R +WL+AEPP +VVA
Sbjct: 149 VPTRELGMQVTKVARMLAAKPMDPEVEQKSY-TVMALLDGGMLRRHKSWLKAEPPNIVVA 207
Query: 613 TLGSLCQMVEKGRLKLDALRTLVIDEVDSIFGSDTQVSMLRKVLTSYSSSMKRQTILASA 792
T+GSL QM+EK KLD++R LV+DEVD IF S QVS +RK+LTSYSS RQT+ ASA
Sbjct: 208 TIGSLSQMLEKQIFKLDSMRILVVDEVDFIFNSSKQVSSIRKLLTSYSSCNNRQTVFASA 267
Query: 793 SIPQHRRFVHNCIQHKWTKRDVVHVHVHPIEPMPSRLTHRYVVCQKDEKYKVLLSLIISD 972
SIPQHRRF+H+CIQ KWTK DVVHVHV+P++PMPS L HR+V+C + EK+++LLSL+ SD
Sbjct: 268 SIPQHRRFLHDCIQQKWTKGDVVHVHVNPVKPMPSCLLHRFVICGRKEKHRLLLSLLQSD 327
Query: 973 APKSAIVFINEQSIKSKKLGEPPTAETILEFLRESYGQTSGGKSHNDLEVSVLDESMNIN 1152
P+S I+F+NEQS KSKK G+ P+ I++FL+ SYG LE+ +L+++MN N
Sbjct: 328 LPESGIIFVNEQSEKSKKAGKAPSTTLIIDFLKASYG--------GSLEIILLEDNMNFN 379
Query: 1153 ERTTALSDMRK-GSCVLIATDLAARGLDIPETSHIYNFDLPKSAIHYIHRAGRSGRKPFS 1329
R +LS++R+ G +L++TD+AARG+D+PET+ IYNFDLPK+AI Y+HRAGR+GRKPFS
Sbjct: 380 SRAASLSEVRQGGGHLLVSTDIAARGIDLPETTDIYNFDLPKTAIDYLHRAGRTGRKPFS 439
Query: 1330 EEKCIVTNLLTKDELFVLKQFENTLLFDCHEI 1425
++KC VTN++ +E FVL+++EN L+F+C E+
Sbjct: 440 DKKCTVTNIILSEERFVLQRYENELMFNCEEL 471
>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
[Vitis vinifera]
Length = 482
Score = 500 bits (1288), Expect = e-139
Identities = 250/462 (54%), Positives = 346/462 (74%), Gaps = 2/462 (0%)
Frame = +1
Query: 46 PSLSTNHISSLQSRNYLRFPKLFKPLSIKCTSTKSTLKIDAIND-SDSSAQNKTLREICK 222
PSL++N ++ + + F + + ++TL +I + SD + TLREIC+
Sbjct: 28 PSLNSNR----RTDSTVHFTRRVSNSNCNAKPAQATLNSSSITEASDIGERTLTLREICQ 83
Query: 223 DKVPHHILNRVEELGFLIPTDVQEQSLPIILSGSDCILQAQTGSGKTLAYLLPIFASITG 402
VP H+L R+EE+GF++PTDVQ+Q+LP++LSG DCIL AQTGSGKTL YLL IF+ +
Sbjct: 84 GCVPEHVLRRIEEVGFIVPTDVQQQALPVLLSGRDCILHAQTGSGKTLTYLLLIFSVVNT 143
Query: 403 RRASVQAVIVVPTRELGMQVAKVARAVASPSNEGKLEKQNVISIMALLDGGTLKRQSTWL 582
+ ++VQA+IVVPTRELG+QV KVAR +A+ E +LE+++ ++MALLDGG LKR +WL
Sbjct: 144 KISAVQALIVVPTRELGIQVTKVARMLAAKPMEPELEQKSC-TVMALLDGGMLKRHKSWL 202
Query: 583 RAEPPQLVVATLGSLCQMVEKGRLKLDALRTLVIDEVDSIFGSDTQVSMLRKVLTSYSSS 762
+AEPP +VVAT+ SLCQM+EK KL+++R LVIDEVD +F + QV LRK+LTSYSS+
Sbjct: 203 KAEPPTIVVATVRSLCQMLEKQIFKLESMRVLVIDEVDFMFNASKQVGSLRKLLTSYSST 262
Query: 763 MKRQTILASASIPQHRRFVHNCIQHKWTKRDVVHVHVHPIEPMPSRLTHRYVVCQKDEKY 942
RQT+ ASASIPQHRRF+H+CIQ KWTK DVVHVHV+PIEPMPS L HR+V+C K E+
Sbjct: 263 NNRQTVFASASIPQHRRFLHDCIQQKWTKSDVVHVHVNPIEPMPSSLHHRFVICNKYERR 322
Query: 943 KVLLSLIISDAPKSAIVFINEQSIKSKKLGEPPTAETILEFLRESYGQTSGGKSHNDLEV 1122
+ LLSL+ SDAP+ I+F+ EQS KSKK G P+A +++FL+ SYG ++
Sbjct: 323 QTLLSLLHSDAPECGIIFVGEQSEKSKKAGNAPSATLLIDFLKTSYGGCP--------DI 374
Query: 1123 SVLDESMNINERTTALSDMR-KGSCVLIATDLAARGLDIPETSHIYNFDLPKSAIHYIHR 1299
+L+E MN N R +LS++R +G +LI+TD+AARG+D+PET+HIYNFDLP++ + Y+HR
Sbjct: 375 LLLEEDMNFNLRAASLSEVRQRGGYLLISTDIAARGVDLPETTHIYNFDLPRTVVDYLHR 434
Query: 1300 AGRSGRKPFSEEKCIVTNLLTKDELFVLKQFENTLLFDCHEI 1425
AGR+ RKPFS++KC VTN++T +E FVL+++EN L+F C E+
Sbjct: 435 AGRAARKPFSDQKCCVTNIITSEERFVLQRYENELMFHCEEL 476
>ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Populus trichocarpa]
gi|550329495|gb|EEF01963.2| hypothetical protein
POPTR_0010s10230g [Populus trichocarpa]
Length = 477
Score = 500 bits (1287), Expect = e-139
Identities = 255/461 (55%), Positives = 344/461 (74%), Gaps = 2/461 (0%)
Frame = +1
Query: 49 SLSTNHISSLQSRNYLRFPKL-FKPLSIKCTSTKSTLKIDAINDSDSSAQNKTLREICKD 225
SL +HI L S L + + F+PL S T D D+ + TLREIC
Sbjct: 29 SLLQSHI--LYSNRALFYSRSSFRPLKAILNSPSLTKVAD---DAKEKGEALTLREICLG 83
Query: 226 KVPHHILNRVEELGFLIPTDVQEQSLPIILSGSDCILQAQTGSGKTLAYLLPIFASITGR 405
+VP H+L RVEE+G+ +PTDVQ+Q+LP++ SG DCIL AQTGSGKTLAYLL IF+ I +
Sbjct: 84 RVPEHLLRRVEEVGYAVPTDVQKQALPVLFSGRDCILHAQTGSGKTLAYLLLIFSVINTQ 143
Query: 406 RASVQAVIVVPTRELGMQVAKVARAVASPSNEGKLEKQNVISIMALLDGGTLKRQSTWLR 585
R++VQA+IVVPTRELG+QV KVAR +A+ E E+++ ++MALLDGG L+R +WL+
Sbjct: 144 RSAVQALIVVPTRELGIQVTKVARMLAATPTENDAEQKSC-TVMALLDGGMLRRHKSWLK 202
Query: 586 AEPPQLVVATLGSLCQMVEKGRLKLDALRTLVIDEVDSIFGSDTQVSMLRKVLTSYSSSM 765
AEPP +VVAT+ SLCQM+EK LKL++++ LVIDEVD +F S QVS LRK+LTSYSS
Sbjct: 203 AEPPTIVVATIASLCQMLEKHLLKLESMQVLVIDEVDFMFNSSKQVSSLRKLLTSYSSCN 262
Query: 766 KRQTILASASIPQHRRFVHNCIQHKWTKRDVVHVHVHPIEPMPSRLTHRYVVCQKDEKYK 945
RQT+ ASASIPQH RF+++CIQ KWTKRDVVHVHV+PIEPMP+ L HR+V+C K ++++
Sbjct: 263 SRQTVFASASIPQHNRFLYDCIQQKWTKRDVVHVHVNPIEPMPTCLQHRFVICSKKQRHQ 322
Query: 946 VLLSLIISDAPKSAIVFINEQSIKSKKLGEPPTAETILEFLRESYGQTSGGKSHNDLEVS 1125
LLSL+ SDAPKS I+F+ EQS KSKK G P +++FL+ SYG S E+
Sbjct: 323 TLLSLLQSDAPKSGIIFVGEQSEKSKKAGNGPPTIDLVDFLKTSYGDCS--------EIL 374
Query: 1126 VLDESMNINERTTALSDMRK-GSCVLIATDLAARGLDIPETSHIYNFDLPKSAIHYIHRA 1302
+L+E MN N R +LS++R+ G +L+ATD+AARG+D+PE +HIYNF+LP++A+ Y+HRA
Sbjct: 375 LLEEDMNFNSRAASLSEVRQGGGYLLVATDIAARGVDLPEITHIYNFNLPRTAVDYLHRA 434
Query: 1303 GRSGRKPFSEEKCIVTNLLTKDELFVLKQFENTLLFDCHEI 1425
GR+GRKPFS+EKC VT+++ +E FVL+++EN L+F+C E+
Sbjct: 435 GRTGRKPFSDEKCNVTSIIMPEERFVLQRYENELMFNCEEL 475
>sp|Q0JFN7.2|RH58_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 58, chloroplastic;
Flags: Precursor
Length = 438
Score = 499 bits (1286), Expect = e-138
Identities = 241/412 (58%), Positives = 315/412 (76%)
Frame = +1
Query: 190 AQNKTLREICKDKVPHHILNRVEELGFLIPTDVQEQSLPIILSGSDCILQAQTGSGKTLA 369
A TLRE+C +VP H+L R EE+G+++PT+VQEQSLP++LSG DCIL AQTGSGKTLA
Sbjct: 35 ASAATLREVCAGRVPEHVLQRAEEVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKTLA 94
Query: 370 YLLPIFASITGRRASVQAVIVVPTRELGMQVAKVARAVASPSNEGKLEKQNVISIMALLD 549
YLL +F++I R+SVQA++VVPTRELGMQV KVAR +A+ + ++MALLD
Sbjct: 95 YLLSVFSAIDFGRSSVQALVVVPTRELGMQVTKVARILAAKA----------CTVMALLD 144
Query: 550 GGTLKRQSTWLRAEPPQLVVATLGSLCQMVEKGRLKLDALRTLVIDEVDSIFGSDTQVSM 729
GG L+RQ +W++AEPP ++VAT+ SLCQM+EK L ++R LVIDEVD IFGS QVS
Sbjct: 145 GGMLRRQKSWVKAEPPAIIVATVASLCQMIEKRAFSLQSMRVLVIDEVDFIFGSSKQVSS 204
Query: 730 LRKVLTSYSSSMKRQTILASASIPQHRRFVHNCIQHKWTKRDVVHVHVHPIEPMPSRLTH 909
LRK+LTSYS++ RQTI ASASIPQH RFVH+C+QHKWTK DVVHVHV+P++PMPS L H
Sbjct: 205 LRKILTSYSAASSRQTIFASASIPQHNRFVHDCVQHKWTKTDVVHVHVNPVQPMPSHLQH 264
Query: 910 RYVVCQKDEKYKVLLSLIISDAPKSAIVFINEQSIKSKKLGEPPTAETILEFLRESYGQT 1089
+Y +C K E+ VLLSL+ DAPKS I+F+ EQS KSKK G PP+ ++EFLR +Y
Sbjct: 265 KYAICSKKERLHVLLSLLEKDAPKSGIIFVAEQSEKSKKAGHPPSTTVVVEFLRTTY--- 321
Query: 1090 SGGKSHNDLEVSVLDESMNINERTTALSDMRKGSCVLIATDLAARGLDIPETSHIYNFDL 1269
LEV +L+E MN N R T+ ++++ +L++TD+A+RG D+P+TSHIYNFDL
Sbjct: 322 -----MGSLEVLLLEEDMNFNARATSFTEVKGKGFLLVSTDIASRGFDLPQTSHIYNFDL 376
Query: 1270 PKSAIHYIHRAGRSGRKPFSEEKCIVTNLLTKDELFVLKQFENTLLFDCHEI 1425
PK+AI Y+HRAGR+GR+PFS+ C VT L+T+DE FVL++F+N L F C E+
Sbjct: 377 PKTAIDYLHRAGRTGREPFSKLACSVTTLITEDEHFVLQRFQNELKFHCEEL 428
>ref|XP_004951318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
[Setaria italica]
Length = 456
Score = 497 bits (1280), Expect = e-138
Identities = 241/413 (58%), Positives = 316/413 (76%)
Frame = +1
Query: 187 SAQNKTLREICKDKVPHHILNRVEELGFLIPTDVQEQSLPIILSGSDCILQAQTGSGKTL 366
+A TLRE+C +VP H+L R EE+G+++PT+VQEQSLP++LSG DCIL AQTGSGKTL
Sbjct: 51 TAAAATLREVCAGRVPDHVLQRAEEVGYVVPTEVQEQSLPLLLSGQDCILHAQTGSGKTL 110
Query: 367 AYLLPIFASITGRRASVQAVIVVPTRELGMQVAKVARAVASPSNEGKLEKQNVISIMALL 546
AYLL +F++I RR+SVQA++VVPTRELG+QV KVAR +A+ + ++MALL
Sbjct: 111 AYLLSVFSAIDFRRSSVQALVVVPTRELGIQVTKVARLLAAKA----------CTVMALL 160
Query: 547 DGGTLKRQSTWLRAEPPQLVVATLGSLCQMVEKGRLKLDALRTLVIDEVDSIFGSDTQVS 726
DGG LKRQ +W++AEPP ++VAT+ SLCQMVE+ L ++R LVIDEVD IFGS QVS
Sbjct: 161 DGGMLKRQKSWVKAEPPAIIVATVPSLCQMVERRAFSLQSMRVLVIDEVDFIFGSSKQVS 220
Query: 727 MLRKVLTSYSSSMKRQTILASASIPQHRRFVHNCIQHKWTKRDVVHVHVHPIEPMPSRLT 906
LRK+LTSYS++ RQTI ASASIPQH RF+H+C+QHKWTK DVVHVHV+P++PMPS L
Sbjct: 221 SLRKILTSYSAASSRQTIFASASIPQHNRFLHDCVQHKWTKSDVVHVHVNPVQPMPSHLC 280
Query: 907 HRYVVCQKDEKYKVLLSLIISDAPKSAIVFINEQSIKSKKLGEPPTAETILEFLRESYGQ 1086
H+YV+C K E+ VLLSL+ DAPKSAI+F+ EQS +SKK G PP+ ++EFLR SY
Sbjct: 281 HKYVICTKKERLHVLLSLLERDAPKSAIIFVAEQSERSKKAGNPPSTAVVIEFLRNSY-- 338
Query: 1087 TSGGKSHNDLEVSVLDESMNINERTTALSDMRKGSCVLIATDLAARGLDIPETSHIYNFD 1266
L+V +L+E MN N R + S++ +L++TD+A+RG D+P+TSHIYNFD
Sbjct: 339 ------KGSLDVLLLEEDMNFNARAASFSEVMGRGFMLVSTDIASRGFDLPQTSHIYNFD 392
Query: 1267 LPKSAIHYIHRAGRSGRKPFSEEKCIVTNLLTKDELFVLKQFENTLLFDCHEI 1425
LPK+A Y+HRAGR+GR+PFS +C VT L+T+DE FVL++F+N L F C E+
Sbjct: 393 LPKTATDYLHRAGRTGREPFSRLECSVTTLITEDEHFVLQRFQNELKFHCEEL 445
>ref|XP_006836561.1| hypothetical protein AMTR_s00131p00060240 [Amborella trichopoda]
gi|548839100|gb|ERM99414.1| hypothetical protein
AMTR_s00131p00060240 [Amborella trichopoda]
Length = 507
Score = 497 bits (1279), Expect = e-138
Identities = 245/412 (59%), Positives = 324/412 (78%)
Frame = +1
Query: 187 SAQNKTLREICKDKVPHHILNRVEELGFLIPTDVQEQSLPIILSGSDCILQAQTGSGKTL 366
+A + +LREIC +VP IL R EE+GF+ PT VQ++SLP +LSG DCIL AQTGSGKTL
Sbjct: 93 AASSSSLREICCGRVPETILQRAEEIGFVRPTHVQQRSLPTLLSGRDCILHAQTGSGKTL 152
Query: 367 AYLLPIFASITGRRASVQAVIVVPTRELGMQVAKVARAVASPSNEGKLEKQNVISIMALL 546
AYLL I ++I ++++VQA++VVP+RELGMQV KVAR +A+ S E +E+++ ++MALL
Sbjct: 153 AYLLVILSAIDVQQSAVQALVVVPSRELGMQVTKVARMLATRSMEFGMEQRSY-TVMALL 211
Query: 547 DGGTLKRQSTWLRAEPPQLVVATLGSLCQMVEKGRLKLDALRTLVIDEVDSIFGSDTQVS 726
DGG LKR W +AEPPQ+VVAT+ SLCQM+EK LKLD+LR LVIDEVD +F S QV
Sbjct: 212 DGGMLKRHKIWFKAEPPQIVVATIDSLCQMIEKQDLKLDSLRVLVIDEVDFLFNSSKQVH 271
Query: 727 MLRKVLTSYSSSMKRQTILASASIPQHRRFVHNCIQHKWTKRDVVHVHVHPIEPMPSRLT 906
LRK+LTSYS++ +RQTI +SASIPQH+ FVH+CIQ KWTKRDVVH+H+HP+EPMPSRL
Sbjct: 272 SLRKLLTSYSAADRRQTIFSSASIPQHKHFVHDCIQQKWTKRDVVHIHLHPVEPMPSRLC 331
Query: 907 HRYVVCQKDEKYKVLLSLIISDAPKSAIVFINEQSIKSKKLGEPPTAETILEFLRESYGQ 1086
H +V C+K+E+ + LLSL+ D PK+ I+F+NEQS KS G PP A I+EFLR S +
Sbjct: 332 HIFVTCKKEERLQTLLSLLQQDIPKTGIIFVNEQSQKSIMAGNPPPAAWIMEFLRTSSTE 391
Query: 1087 TSGGKSHNDLEVSVLDESMNINERTTALSDMRKGSCVLIATDLAARGLDIPETSHIYNFD 1266
S E+ +L+E M+IN RT +LS+ R+G +L+ATDLA+RG+D+PET+HIYNFD
Sbjct: 392 FS--------EIFLLEEGMSINARTLSLSEARQGRSLLVATDLASRGVDLPETTHIYNFD 443
Query: 1267 LPKSAIHYIHRAGRSGRKPFSEEKCIVTNLLTKDELFVLKQFENTLLFDCHE 1422
LP++AI Y+HRAGR+GR+PFS+E C VTNL+ +E FVL+++EN L+F+C E
Sbjct: 444 LPRTAIEYLHRAGRTGRRPFSDEMCTVTNLIAPEERFVLQRYENELMFECKE 495
>ref|XP_006646732.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
[Oryza brachyantha]
Length = 448
Score = 496 bits (1277), Expect = e-137
Identities = 235/408 (57%), Positives = 314/408 (76%)
Frame = +1
Query: 202 TLREICKDKVPHHILNRVEELGFLIPTDVQEQSLPIILSGSDCILQAQTGSGKTLAYLLP 381
TLRE+C +VP H++ R EE+G+++PT+VQEQSLP++LSG DCIL AQTGSGKTLAYLL
Sbjct: 49 TLREVCAGRVPEHVIQRAEEVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKTLAYLLS 108
Query: 382 IFASITGRRASVQAVIVVPTRELGMQVAKVARAVASPSNEGKLEKQNVISIMALLDGGTL 561
+F++I R+SVQA++VVPTRELGMQV KVAR +A+ + ++MALLDGG L
Sbjct: 109 VFSAIDFGRSSVQALVVVPTRELGMQVTKVARVLAAKA----------CTVMALLDGGML 158
Query: 562 KRQSTWLRAEPPQLVVATLGSLCQMVEKGRLKLDALRTLVIDEVDSIFGSDTQVSMLRKV 741
+RQ +W++A+PP +VVAT+ SLCQM+EK L +++ LVIDEVD IFGS QVS LRK+
Sbjct: 159 RRQKSWVKADPPAIVVATVASLCQMLEKRAFSLQSMKVLVIDEVDFIFGSSKQVSSLRKI 218
Query: 742 LTSYSSSMKRQTILASASIPQHRRFVHNCIQHKWTKRDVVHVHVHPIEPMPSRLTHRYVV 921
LTSYS++ RQTI ASASIPQH RF+H+C+QHKWTK DVVHVHV+P++PMPS L HRY +
Sbjct: 219 LTSYSAASSRQTIFASASIPQHNRFLHDCVQHKWTKSDVVHVHVNPVQPMPSHLCHRYAI 278
Query: 922 CQKDEKYKVLLSLIISDAPKSAIVFINEQSIKSKKLGEPPTAETILEFLRESYGQTSGGK 1101
C K E+ +LLSL+ DAPKS I+F+ EQS +SKK G PP+ ++EFLR +Y
Sbjct: 279 CSKKERLHILLSLLEKDAPKSGIIFVAEQSERSKKAGHPPSTTVVVEFLRSTY------- 331
Query: 1102 SHNDLEVSVLDESMNINERTTALSDMRKGSCVLIATDLAARGLDIPETSHIYNFDLPKSA 1281
LEV +L+E MN N R + ++++ +L++TD+A+RG D+P+TSHIYNFDLPK+A
Sbjct: 332 -MGSLEVLLLEEDMNFNARAISFTEVKGKGFLLVSTDIASRGFDLPQTSHIYNFDLPKTA 390
Query: 1282 IHYIHRAGRSGRKPFSEEKCIVTNLLTKDELFVLKQFENTLLFDCHEI 1425
+ Y+HRAGR+GR+PFS+ C VT L+T+DELFVL++F+N L F C E+
Sbjct: 391 VDYLHRAGRTGREPFSKSACSVTTLITEDELFVLQRFQNELKFHCEEL 438
>gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus notabilis]
Length = 464
Score = 494 bits (1272), Expect = e-137
Identities = 248/439 (56%), Positives = 334/439 (76%), Gaps = 1/439 (0%)
Frame = +1
Query: 118 PLSIKCTSTKSTLKIDAINDSDSSAQNKTLREICKDKVPHHILNRVEELGFLIPTDVQEQ 297
PL+I+ + DA+ D +A TLR +C+ VP H+ VEE+G++ PTDVQ Q
Sbjct: 41 PLAIRSVPNLLSSAADAVPDEQRAA---TLRRLCEGLVPEHV---VEEVGYIEPTDVQRQ 94
Query: 298 SLPIILSGSDCILQAQTGSGKTLAYLLPIFASITGRRASVQAVIVVPTRELGMQVAKVAR 477
+LPI+ SG DC+L AQTGSGKTL YLL IF+ + +R++VQA+IVVPTRELGMQV KVAR
Sbjct: 95 ALPILFSGRDCVLHAQTGSGKTLTYLLLIFSVVNTQRSAVQALIVVPTRELGMQVTKVAR 154
Query: 478 AVASPSNEGKLEKQNVISIMALLDGGTLKRQSTWLRAEPPQLVVATLGSLCQMVEKGRLK 657
+A+ E LE+++ S+MALLDGGTL+R +WL+AEPP +VVAT+GSLCQ ++K L
Sbjct: 155 TLAAKPMESDLEQKSC-SVMALLDGGTLRRHKSWLKAEPPTVVVATIGSLCQQLDKQILT 213
Query: 658 LDALRTLVIDEVDSIFGSDTQVSMLRKVLTSYSSSMKRQTILASASIPQHRRFVHNCIQH 837
L+++R LVIDEVD IF S QVS LRK+LTSYS+ RQT+ ASASIPQHRRF+H C+Q
Sbjct: 214 LESMRVLVIDEVDFIFNSSKQVSSLRKLLTSYSTISNRQTVFASASIPQHRRFLHECVQQ 273
Query: 838 KWTKRDVVHVHVHPIEPMPSRLTHRYVVCQKDEKYKVLLSLIISDAPKSAIVFINEQSIK 1017
KWTK +VVHVHV+PIEPMPS L H +V+C K+++ + LLSL+ SDAP S I+F+ EQS K
Sbjct: 274 KWTKSNVVHVHVNPIEPMPSCLHHNFVICGKNKRLQTLLSLLHSDAPHSGIIFVGEQSEK 333
Query: 1018 SKKLGEPPTAETILEFLRESYGQTSGGKSHNDLEVSVLDESMNINERTTALSDMRK-GSC 1194
SKK G P +++FL++SY GG E+ +L+E MNIN RT +LS++R+ G
Sbjct: 334 SKKAGNAPPTTILMDFLKDSY---KGGS-----EILLLEEDMNINSRTASLSEVRQGGGY 385
Query: 1195 VLIATDLAARGLDIPETSHIYNFDLPKSAIHYIHRAGRSGRKPFSEEKCIVTNLLTKDEL 1374
+L++TDLAARG+D+PET+HIYNFDLP++A Y+HRAGR+GRKPFS E+C VTN++T +E
Sbjct: 386 LLVSTDLAARGVDLPETTHIYNFDLPRTATDYLHRAGRTGRKPFSNEECTVTNIITSEER 445
Query: 1375 FVLKQFENTLLFDCHEISS 1431
FVL+++EN L+F+C E+++
Sbjct: 446 FVLQRYENELMFNCEELAT 464
>emb|CBI26203.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 493 bits (1269), Expect = e-137
Identities = 249/466 (53%), Positives = 346/466 (74%), Gaps = 6/466 (1%)
Frame = +1
Query: 46 PSLSTNHISSLQSRNYLRFPKLFKPLSIKCTSTKSTLKIDAIND-SDSSAQNKTLREICK 222
PSL++N ++ + + F + + ++TL +I + SD + TLREIC+
Sbjct: 28 PSLNSNR----RTDSTVHFTRRVSNSNCNAKPAQATLNSSSITEASDIGERTLTLREICQ 83
Query: 223 DKVPHHILN----RVEELGFLIPTDVQEQSLPIILSGSDCILQAQTGSGKTLAYLLPIFA 390
VP H++ R+EE+GF++PTDVQ+Q+LP++LSG DCIL AQTGSGKTL YLL IF+
Sbjct: 84 GCVPEHVIALICFRIEEVGFIVPTDVQQQALPVLLSGRDCILHAQTGSGKTLTYLLLIFS 143
Query: 391 SITGRRASVQAVIVVPTRELGMQVAKVARAVASPSNEGKLEKQNVISIMALLDGGTLKRQ 570
+ + ++VQA+IVVPTRELG+QV KVAR +A+ E +LE+++ ++MALLDGG LKR
Sbjct: 144 VVNTKISAVQALIVVPTRELGIQVTKVARMLAAKPMEPELEQKSC-TVMALLDGGMLKRH 202
Query: 571 STWLRAEPPQLVVATLGSLCQMVEKGRLKLDALRTLVIDEVDSIFGSDTQVSMLRKVLTS 750
+WL+AEPP +VVAT+ SLCQM+EK KL+++R LVIDEVD +F + QV LRK+LTS
Sbjct: 203 KSWLKAEPPTIVVATVRSLCQMLEKQIFKLESMRVLVIDEVDFMFNASKQVGSLRKLLTS 262
Query: 751 YSSSMKRQTILASASIPQHRRFVHNCIQHKWTKRDVVHVHVHPIEPMPSRLTHRYVVCQK 930
YSS+ RQT+ ASASIPQHRRF+H+CIQ KWTK DVVHVHV+PIEPMPS L HR+V+C K
Sbjct: 263 YSSTNNRQTVFASASIPQHRRFLHDCIQQKWTKSDVVHVHVNPIEPMPSSLHHRFVICNK 322
Query: 931 DEKYKVLLSLIISDAPKSAIVFINEQSIKSKKLGEPPTAETILEFLRESYGQTSGGKSHN 1110
E+ + LLSL+ SDAP+ I+F+ EQS KSKK G P+A +++FL+ SYG
Sbjct: 323 YERRQTLLSLLHSDAPECGIIFVGEQSEKSKKAGNAPSATLLIDFLKTSYGGCP------ 376
Query: 1111 DLEVSVLDESMNINERTTALSDMR-KGSCVLIATDLAARGLDIPETSHIYNFDLPKSAIH 1287
++ +L+E MN N R +LS++R +G +LI+TD+AARG+D+PET+HIYNFDLP++ +
Sbjct: 377 --DILLLEEDMNFNLRAASLSEVRQRGGYLLISTDIAARGVDLPETTHIYNFDLPRTVVD 434
Query: 1288 YIHRAGRSGRKPFSEEKCIVTNLLTKDELFVLKQFENTLLFDCHEI 1425
Y+HRAGR+ RKPFS++KC VTN++T +E FVL+++EN L+F C E+
Sbjct: 435 YLHRAGRAARKPFSDQKCCVTNIITSEERFVLQRYENELMFHCEEL 480
>ref|XP_004134454.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
[Cucumis sativus] gi|449531697|ref|XP_004172822.1|
PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Cucumis sativus]
Length = 473
Score = 491 bits (1265), Expect = e-136
Identities = 245/438 (55%), Positives = 332/438 (75%), Gaps = 1/438 (0%)
Frame = +1
Query: 115 KPLSIKCTSTKSTLKIDAINDSDSSAQNKTLREICKDKVPHHILNRVEELGFLIPTDVQE 294
K ++ + S+LK N ++S+ + TLREIC VP HIL R EE+GF+ PTDVQ
Sbjct: 47 KSRPLQALLSSSSLK----NVAESNFEASTLREICNGHVPEHILRRTEEIGFVAPTDVQR 102
Query: 295 QSLPIILSGSDCILQAQTGSGKTLAYLLPIFASITGRRASVQAVIVVPTRELGMQVAKVA 474
Q+LP++ SG DC+L AQTGSGKTL YLL IF+ I ++++VQA+IVVPTRELGMQV KVA
Sbjct: 103 QALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAKKSAVQALIVVPTRELGMQVTKVA 162
Query: 475 RAVASPSNEGKLEKQNVISIMALLDGGTLKRQSTWLRAEPPQLVVATLGSLCQMVEKGRL 654
R +A+ + + N +MALLDGG L+R TWL+A+PP+++VAT+GSLCQMVE+ L
Sbjct: 163 RMLAAKPAASE-DGLNSYVVMALLDGGLLRRHKTWLKADPPEILVATVGSLCQMVERQFL 221
Query: 655 KLDALRTLVIDEVDSIFGSDTQVSMLRKVLTSYSSSMKRQTILASASIPQHRRFVHNCIQ 834
L +L LVIDEVD +F S QVS L+K+LTSYSS RQTI ASASIPQHR F+H+CIQ
Sbjct: 222 DLGSLNVLVIDEVDFMFSSSKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHFLHDCIQ 281
Query: 835 HKWTKRDVVHVHVHPIEPMPSRLTHRYVVCQKDEKYKVLLSLIISDAPKSAIVFINEQSI 1014
KWTK VVH+H++ +PMPS L HR+V C+K++K++ LL+L+++D P+SAI+F++EQS
Sbjct: 282 QKWTKSTVVHIHINSTQPMPSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIFVSEQSE 341
Query: 1015 KSKKLGEPPTAETILEFLRESYGQTSGGKSHNDLEVSVLDESMNINERTTALSDMRK-GS 1191
KSKK G+ P +++FL+ SYG S +V +L+E +N N R ++LS++R+ GS
Sbjct: 342 KSKKAGKIPPTTLMIDFLKASYGGCS--------DVILLEEDVNYNLRASSLSELRQGGS 393
Query: 1192 CVLIATDLAARGLDIPETSHIYNFDLPKSAIHYIHRAGRSGRKPFSEEKCIVTNLLTKDE 1371
+++ATD+ ARG+D+PET+HIYNFDLP+ AI Y+HRAGR+GRKPFSEEKC+VTNL+T +E
Sbjct: 394 YLIVATDIVARGIDLPETTHIYNFDLPRCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEE 453
Query: 1372 LFVLKQFENTLLFDCHEI 1425
FVL++FEN LLF C E+
Sbjct: 454 RFVLQKFENELLFICEEV 471
>gb|EMJ24082.1| hypothetical protein PRUPE_ppa005191mg [Prunus persica]
Length = 473
Score = 491 bits (1263), Expect = e-136
Identities = 253/462 (54%), Positives = 339/462 (73%), Gaps = 1/462 (0%)
Frame = +1
Query: 43 FPSLSTNHISSLQSRNYLRFPKLFKPLSIKCTSTKSTLKIDAINDSDSSAQNKTLREICK 222
FP S NH L S N F P+ ST T ++ S + TLR+IC+
Sbjct: 28 FPFQSLNHSPRLFSSN--GFVSNCSPIQALLNSTPIT------TEAGSEPEPFTLRQICQ 79
Query: 223 DKVPHHILNRVEELGFLIPTDVQEQSLPIILSGSDCILQAQTGSGKTLAYLLPIFASITG 402
VP H+L ++EELGF++PT VQ Q+LP + SG DCIL AQTGSGKTL YLL +F+ +
Sbjct: 80 SHVPDHVLCKMEELGFVVPTPVQRQALPTLFSGRDCILHAQTGSGKTLTYLLLVFSIVNA 139
Query: 403 RRASVQAVIVVPTRELGMQVAKVARAVASPSNEGKLEKQNVISIMALLDGGTLKRQSTWL 582
RR++VQA+IVVPTRELGMQV KVAR +A+ EG+LE+++ ++MALLDGG L R +WL
Sbjct: 140 RRSAVQALIVVPTRELGMQVTKVARMLATKPKEGELEQKSC-TVMALLDGGMLMRHKSWL 198
Query: 583 RAEPPQLVVATLGSLCQMVEKGRLKLDALRTLVIDEVDSIFGSDTQVSMLRKVLTSYSSS 762
+AEPP +VVAT+GSLCQM+EK +KL+A+R LVIDEVD +F S QVS LRK+LTSYSS
Sbjct: 199 KAEPPTIVVATIGSLCQMLEKHMIKLEAMRVLVIDEVDFMFSSK-QVSSLRKLLTSYSSI 257
Query: 763 MKRQTILASASIPQHRRFVHNCIQHKWTKRDVVHVHVHPIEPMPSRLTHRYVVCQKDEKY 942
RQT+ ASASIPQH+ F+ CIQ KWTK D +HVHV+P+EPMPS L HR+V+C K+ ++
Sbjct: 258 NTRQTVFASASIPQHKIFLDKCIQQKWTKNDTIHVHVNPVEPMPSCLHHRFVICLKNRRH 317
Query: 943 KVLLSLIISDAPKSAIVFINEQSIKSKKLGEPPTAETILEFLRESYGQTSGGKSHNDLEV 1122
+ LLSL+ SDAP+SAIVF+ EQS KSKK G +A ++ FL+ SY S ++
Sbjct: 318 ETLLSLLQSDAPQSAIVFVGEQSEKSKKAGNASSATLLINFLKASYEGYS--------DI 369
Query: 1123 SVLDESMNINERTTALSDMRK-GSCVLIATDLAARGLDIPETSHIYNFDLPKSAIHYIHR 1299
+L+E MN N R +LS++R+ GS +L++TD+AARGLD+PET+HIYN+DLP++AI Y+HR
Sbjct: 370 LLLEEDMNFNSRAASLSEVRQAGSYLLVSTDIAARGLDLPETTHIYNYDLPRTAIDYLHR 429
Query: 1300 AGRSGRKPFSEEKCIVTNLLTKDELFVLKQFENTLLFDCHEI 1425
AGR+GRKPFS++KC VT+++ E FVL+++EN L+F+C E+
Sbjct: 430 AGRTGRKPFSDKKCSVTSIIISKERFVLEKYENELMFNCEEL 471
>ref|XP_006489326.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
isoform X1 [Citrus sinensis]
Length = 473
Score = 489 bits (1259), Expect = e-135
Identities = 251/477 (52%), Positives = 344/477 (72%), Gaps = 6/477 (1%)
Frame = +1
Query: 16 MAAASSFVCFPSLSTNHISSLQSRNYLRFP-KLFKPLSIKCTSTKSTLKIDAINDSDSSA 192
MAA + L T L S N + F + F P+SI ++ L A++ + +A
Sbjct: 1 MAAIAISATHTILVTRVNHKLSSPNSIEFTNRAFLPVSISWKPLRAVLSSSAVSIEELAA 60
Query: 193 ----QNKTLREICKDKVPHHILNRVEELGFLIPTDVQEQSLPIILSGSDCILQAQTGSGK 360
+ TLRE+C+ VP H+L R++E G+++PTD+Q ++LP++ S DCIL AQTGSGK
Sbjct: 61 GTGNNSLTLRELCQGHVPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGSGK 120
Query: 361 TLAYLLPIFASITGRRASVQAVIVVPTRELGMQVAKVARAVASPSNEGKLEKQNVISIMA 540
TL YLL IF+ + +R++VQAVIVVPTRELGMQV KVAR +A+ ++ LE + ++MA
Sbjct: 121 TLTYLLLIFSLVNAQRSAVQAVIVVPTRELGMQVTKVARVLAAKPSDTDLEHKPC-TVMA 179
Query: 541 LLDGGTLKRQSTWLRAEPPQLVVATLGSLCQMVEKGRLKLDALRTLVIDEVDSIFGSDTQ 720
LLDGG L+R +WL+AEPP +VVAT+GSLCQ++EK KL++++ LVIDEVD +F S Q
Sbjct: 180 LLDGGMLRRHKSWLKAEPPTIVVATMGSLCQLIEKHIFKLESVQVLVIDEVDFLFNSSKQ 239
Query: 721 VSMLRKVLTSYSSSMKRQTILASASIPQHRRFVHNCIQHKWTKRDVVHVHVHPIEPMPSR 900
VS L+K+L SYSS RQT+ ASASIPQHRRF+HNCIQ KWTK DVVHVHV+ I+P+PS
Sbjct: 240 VSSLKKLLASYSSCNNRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSC 299
Query: 901 LTHRYVVCQKDEKYKVLLSLIISDAPKSAIVFINEQSIKSKKLGEPPTAETILEFLRESY 1080
L HR+V+C K KY+ LLSLI SDAP+S I+F+ EQS KSKK G P+ +++FL SY
Sbjct: 300 LHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSY 359
Query: 1081 GQTSGGKSHNDLEVSVLDESMNINERTTALSDMRK-GSCVLIATDLAARGLDIPETSHIY 1257
+S +V +L+E MN N R +L ++R+ G +L++TD+AARG+D+PET+HIY
Sbjct: 360 KGSS--------DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIY 411
Query: 1258 NFDLPKSAIHYIHRAGRSGRKPFSEEKCIVTNLLTKDELFVLKQFENTLLFDCHEIS 1428
NFDLP+SAI Y+HRAGR+GRKPFS+EK VT+++T +ELFVL+++EN L F E++
Sbjct: 412 NFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEELT 468
>ref|XP_006419853.1| hypothetical protein CICLE_v10004897mg [Citrus clementina]
gi|557521726|gb|ESR33093.1| hypothetical protein
CICLE_v10004897mg [Citrus clementina]
Length = 473
Score = 486 bits (1250), Expect = e-134
Identities = 249/477 (52%), Positives = 343/477 (71%), Gaps = 6/477 (1%)
Frame = +1
Query: 16 MAAASSFVCFPSLSTNHISSLQSRNYLRFP-KLFKPLSIKCTSTKSTLKIDAINDSDSSA 192
MAA + L T L S N + + F P+SI ++ L A++ + +A
Sbjct: 1 MAAIAISATHTILVTRVNHKLSSPNSIELTNRAFLPVSISWKPLRAVLSSSAVSTEELAA 60
Query: 193 ----QNKTLREICKDKVPHHILNRVEELGFLIPTDVQEQSLPIILSGSDCILQAQTGSGK 360
+ TLRE+C+ VP H+L R++E G+++PTD+Q ++LP++ S DCIL AQTGSGK
Sbjct: 61 GTGNNSLTLRELCQGHVPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGSGK 120
Query: 361 TLAYLLPIFASITGRRASVQAVIVVPTRELGMQVAKVARAVASPSNEGKLEKQNVISIMA 540
TL YLL IF+ + +R++VQAVIVVPTRELGMQV KVAR +A+ ++ LE + ++MA
Sbjct: 121 TLTYLLLIFSLVNAQRSAVQAVIVVPTRELGMQVTKVARVLAAKPSDTDLEHKPC-TVMA 179
Query: 541 LLDGGTLKRQSTWLRAEPPQLVVATLGSLCQMVEKGRLKLDALRTLVIDEVDSIFGSDTQ 720
LLDGG L+R +WL+AEPP +VVAT+GSLCQ++EK KL++++ LVIDEVD +F S Q
Sbjct: 180 LLDGGMLRRHKSWLKAEPPTIVVATMGSLCQLIEKHIFKLESVQVLVIDEVDFLFNSSKQ 239
Query: 721 VSMLRKVLTSYSSSMKRQTILASASIPQHRRFVHNCIQHKWTKRDVVHVHVHPIEPMPSR 900
VS L+K+L SYSS RQT+ ASASIPQHRRF+H+CIQ KWTK DVVHVHV+ I+P+PS
Sbjct: 240 VSSLKKLLASYSSCNNRQTVFASASIPQHRRFLHDCIQQKWTKSDVVHVHVNAIKPLPSC 299
Query: 901 LTHRYVVCQKDEKYKVLLSLIISDAPKSAIVFINEQSIKSKKLGEPPTAETILEFLRESY 1080
L HR+V+C K KY+ LLSLI SDAP+S I+F+ EQS KSKK G P+ +++FL SY
Sbjct: 300 LHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSY 359
Query: 1081 GQTSGGKSHNDLEVSVLDESMNINERTTALSDMRK-GSCVLIATDLAARGLDIPETSHIY 1257
+S +V +L+E MN N R +L ++R+ G +L++TD+AARG+D+PET+HIY
Sbjct: 360 KGSS--------DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIY 411
Query: 1258 NFDLPKSAIHYIHRAGRSGRKPFSEEKCIVTNLLTKDELFVLKQFENTLLFDCHEIS 1428
NFDLP+SAI Y+HRAGR+GRKPFS+EK VT+++T +ELFVL+++EN L F E++
Sbjct: 412 NFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEELT 468
>gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum]
gi|11385590|gb|AAG34876.1|AF261021_1 putative chloroplast
RNA helicase VDL isoform 1 [Nicotiana tabacum]
Length = 466
Score = 485 bits (1249), Expect = e-134
Identities = 254/462 (54%), Positives = 345/462 (74%), Gaps = 5/462 (1%)
Frame = +1
Query: 55 STNHISSLQSRNYL-RFPKLF---KPLSIKCTSTKSTLKIDAINDSDSSAQNKTLREICK 222
S N S NY R PK KPL ++ ST ++A ++ S+ TLRE+C
Sbjct: 17 SLNRTSHHFKPNYTYRTPKFLFRQKPL----IASFSTSDVEARTETKDSS-TATLRELCH 71
Query: 223 DKVPHHILNRVEELGFLIPTDVQEQSLPIILSGSDCILQAQTGSGKTLAYLLPIFASITG 402
VP H++ RVEE+G++IPT+VQ Q+LP + SG DC+L AQTGSGKTLAYLL I + I
Sbjct: 72 GHVPEHVIRRVEEVGYVIPTEVQLQALPFLYSGRDCVLHAQTGSGKTLAYLLQILSVIDS 131
Query: 403 RRASVQAVIVVPTRELGMQVAKVARAVASPSNEGKLEKQNVISIMALLDGGTLKRQSTWL 582
+R++VQA+IVVPTRELGMQV KVAR +A+ +E + ++ ++MALLDGG L R +WL
Sbjct: 132 QRSAVQALIVVPTRELGMQVTKVARMLAAKPSELESGPKSC-TVMALLDGGMLNRHKSWL 190
Query: 583 RAEPPQLVVATLGSLCQMVEKGRLKLDALRTLVIDEVDSIFGSDTQVSMLRKVLTSYSSS 762
+AEPP +VVAT+GSLCQM+EK LKLD+ + LV+DEVD +F S ++S L+++LTSYS+S
Sbjct: 191 KAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFMFNSSKEISSLKRLLTSYSTS 250
Query: 763 MKRQTILASASIPQHRRFVHNCIQHKWTKRDVVHVHVHPIEPMPSRLTHRYVVCQKDEKY 942
RQTI ASASIPQHRRF+++C+Q KWTK DVVHVHV+ +EPMPS L HR+VVC K EK
Sbjct: 251 KNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHVNSVEPMPSCLHHRFVVCTKREKN 310
Query: 943 KVLLSLIISDAPKSAIVFINEQSIKSKKLGEPPTAETILEFLRESYGQTSGGKSHNDLEV 1122
+VLLSL+ D+P+SAI+F++EQS KSKK G P +++FL S SGG S+ V
Sbjct: 311 QVLLSLLQVDSPESAIIFVSEQSEKSKKAGNAPPITLLVDFLMSS----SGGFSN----V 362
Query: 1123 SVLDESMNINERTTALSDMR-KGSCVLIATDLAARGLDIPETSHIYNFDLPKSAIHYIHR 1299
S+L+E MN N+R +LS++R G +L+ATD+AARG+D+PET+HIYNFD+PK A++Y+HR
Sbjct: 363 SLLEEDMNFNKRAASLSELRGGGGYLLVATDIAARGVDLPETTHIYNFDIPKDAVNYLHR 422
Query: 1300 AGRSGRKPFSEEKCIVTNLLTKDELFVLKQFENTLLFDCHEI 1425
AGR+GRKPFS++KC VT+++T +E FVL++FEN L+F C ++
Sbjct: 423 AGRTGRKPFSDKKCFVTSIITVEERFVLQRFENELMFCCEQL 464
>ref|NP_001147746.1| ATP binding protein [Zea mays] gi|195613438|gb|ACG28549.1| ATP
binding protein [Zea mays]
Length = 447
Score = 485 bits (1248), Expect = e-134
Identities = 237/414 (57%), Positives = 312/414 (75%), Gaps = 2/414 (0%)
Frame = +1
Query: 187 SAQNKTLREICKDKVPHHILNRVEELGFLIPTDVQEQSLPIILSGSDCILQAQTGSGKTL 366
+A TLRE+C +VP H+L R EE+G+++PT++QEQSLP++LSG DCIL AQTGSGKTL
Sbjct: 41 NAAAATLREVCSGRVPDHVLQRAEEIGYVVPTEMQEQSLPLLLSGQDCILHAQTGSGKTL 100
Query: 367 AYLLPIFASITGRRASVQAVIVVPTRELGMQVAKVARAVASPSNEGKLEKQNVISIMALL 546
AYLL IF++I R+SVQA++VVPTRELGMQV KVAR +A+ + ++MALL
Sbjct: 101 AYLLSIFSTIDFSRSSVQALVVVPTRELGMQVTKVARLLAAKA----------CTVMALL 150
Query: 547 DGGTLKRQSTWLRAEPPQLVVATLGSLCQMVEKGRLKLDALRTLVIDEVDSIFGSDTQVS 726
DGGTLKRQ +W++AEPP ++VAT+ SLCQMVE+ L ++R LVIDEVD IFGS QVS
Sbjct: 151 DGGTLKRQKSWVKAEPPAIIVATVASLCQMVERRAFSLQSMRVLVIDEVDFIFGSSKQVS 210
Query: 727 MLRKVLTSYSSSMKRQTILASASIPQHRRFVHNCIQHKWTKRDVVHVHVHPIEPMPSRLT 906
LRK+LTSYS++ RQTI ASASIPQH RF+H+C+QHKWTK DVVHVHVHP++PMPS L
Sbjct: 211 SLRKILTSYSAASSRQTIFASASIPQHNRFLHDCVQHKWTKGDVVHVHVHPVQPMPSHLC 270
Query: 907 HRYVVCQKDEKYKVLLSLIISDAPKSAIVFINEQSIKSKKLGEPPTAETILEFLRESYGQ 1086
H+YV+C K E+ VLLSL+ DAPKSAI+F+ QS +SKK G PP+ + +FLR Y
Sbjct: 271 HKYVICTKKERMHVLLSLLERDAPKSAIIFVAGQSERSKKAGNPPSTMVVSDFLRNEY-- 328
Query: 1087 TSGGKSHNDLEVSVLDESMNINERTTALSDMRKGSCVLIATDLAARGLDIPETSHIYNFD 1266
L+V +L+E MN N R + S+++ +L++TD+A+RG D+P+TSH+YN D
Sbjct: 329 ------KGSLDVMLLEEDMNFNARAASFSEVKGRGFLLVSTDIASRGFDLPQTSHVYNLD 382
Query: 1267 LPKSAIHYIHRAGRSGRKPFS--EEKCIVTNLLTKDELFVLKQFENTLLFDCHE 1422
LPK+A Y+HRAGR+GR+PFS E +C VT L+T++E FVL++F+N L F E
Sbjct: 383 LPKTATDYLHRAGRTGRQPFSRLELECCVTTLITEEEHFVLRRFQNELKFHTQE 436
>ref|XP_003565158.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
[Brachypodium distachyon]
Length = 446
Score = 484 bits (1246), Expect = e-134
Identities = 230/408 (56%), Positives = 318/408 (77%)
Frame = +1
Query: 202 TLREICKDKVPHHILNRVEELGFLIPTDVQEQSLPIILSGSDCILQAQTGSGKTLAYLLP 381
TLRE+C +VP H+L R E++G+++PT+VQEQSLP++LSG DCIL AQTGSGKTLAYLL
Sbjct: 47 TLREVCAGRVPDHVLQRAEDVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKTLAYLLS 106
Query: 382 IFASITGRRASVQAVIVVPTRELGMQVAKVARAVASPSNEGKLEKQNVISIMALLDGGTL 561
+F++I RR+SVQA+++VPTRELG+QV KVAR +A+ + ++MALLDGG L
Sbjct: 107 VFSAIDVRRSSVQALVIVPTRELGIQVTKVARVLAAKA----------CTVMALLDGGML 156
Query: 562 KRQSTWLRAEPPQLVVATLGSLCQMVEKGRLKLDALRTLVIDEVDSIFGSDTQVSMLRKV 741
RQ +W++AEPP ++VAT+ SLCQMVEK L +++ LVIDEVD IFGS QV+ +RK+
Sbjct: 157 TRQKSWVKAEPPAIIVATVASLCQMVEKRAFSLGSIKILVIDEVDFIFGSSKQVNSVRKI 216
Query: 742 LTSYSSSMKRQTILASASIPQHRRFVHNCIQHKWTKRDVVHVHVHPIEPMPSRLTHRYVV 921
LTSY+++ RQTI ASASIPQH RFVH+CIQHKWTK +VVHVHV+P++PMPS+L H+Y +
Sbjct: 217 LTSYTAASGRQTIFASASIPQHNRFVHDCIQHKWTKSNVVHVHVNPVQPMPSQLHHKYAI 276
Query: 922 CQKDEKYKVLLSLIISDAPKSAIVFINEQSIKSKKLGEPPTAETILEFLRESYGQTSGGK 1101
C K E+ VLLSL+ DAPKSAI+F+ +QS KSK+ G PP++ ++EF+R +Y
Sbjct: 277 CMKKERLHVLLSLLERDAPKSAIIFVAQQSEKSKRAGNPPSSILVVEFMRTAY------- 329
Query: 1102 SHNDLEVSVLDESMNINERTTALSDMRKGSCVLIATDLAARGLDIPETSHIYNFDLPKSA 1281
+ LEV +L+E+MN N R T+ +++++ +L++TD+A+RG D+P+ SHIYNFDLPK+A
Sbjct: 330 -NGSLEVLLLEENMNFNARATSFTEVKEKGFLLVSTDIASRGFDLPQISHIYNFDLPKTA 388
Query: 1282 IHYIHRAGRSGRKPFSEEKCIVTNLLTKDELFVLKQFENTLLFDCHEI 1425
Y+HRAGR+GR+PFS+ +C VT L+T+DE FVL++F+N L F E+
Sbjct: 389 TDYLHRAGRTGREPFSKSECSVTTLITEDEHFVLQRFQNELKFHSQEL 436
>ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223543830|gb|EEF45358.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 476
Score = 484 bits (1246), Expect = e-134
Identities = 231/409 (56%), Positives = 320/409 (78%), Gaps = 1/409 (0%)
Frame = +1
Query: 202 TLREICKDKVPHHILNRVEELGFLIPTDVQEQSLPIILSGSDCILQAQTGSGKTLAYLLP 381
TLRE+C++ VP +L+R+EE+G+++PTDVQ Q+LP++ SG DCIL QTGSGKTLAYLL
Sbjct: 82 TLRELCQNYVPEPVLHRMEEIGYVMPTDVQRQALPVLFSGQDCILHGQTGSGKTLAYLLL 141
Query: 382 IFASITGRRASVQAVIVVPTRELGMQVAKVARAVASPSNEGKLEKQNVISIMALLDGGTL 561
I++ I +R++VQA+I+VPTRELGMQV KVAR +A+ K +++MALLDGG L
Sbjct: 142 IYSVINAQRSAVQALIIVPTRELGMQVTKVARMLAA--------KPMDVTVMALLDGGML 193
Query: 562 KRQSTWLRAEPPQLVVATLGSLCQMVEKGRLKLDALRTLVIDEVDSIFGSDTQVSMLRKV 741
+R +WL+AEPP++VVAT+ SLCQM+EK KLD+++ LVIDEVD +F S QVS LRK+
Sbjct: 194 RRHKSWLKAEPPKIVVATIASLCQMLEKHIFKLDSMQVLVIDEVDFMFNSSKQVSSLRKL 253
Query: 742 LTSYSSSMKRQTILASASIPQHRRFVHNCIQHKWTKRDVVHVHVHPIEPMPSRLTHRYVV 921
LTSYSS RQT+ ASASIPQHRRF+++CIQ KWTK D VHVH++P++PMPS L HR+V+
Sbjct: 254 LTSYSSCNSRQTVFASASIPQHRRFLYDCIQQKWTKSDAVHVHINPVQPMPSCLQHRFVI 313
Query: 922 CQKDEKYKVLLSLIISDAPKSAIVFINEQSIKSKKLGEPPTAETILEFLRESYGQTSGGK 1101
C K++++++LLSL+ DAPKS IVF+ EQS KSKK G P +++FL SY S
Sbjct: 314 CSKNQRHQILLSLLQCDAPKSGIVFVGEQSEKSKKAGHAPPTTLLVDFLETSYSDCS--- 370
Query: 1102 SHNDLEVSVLDESMNINERTTALSDMRK-GSCVLIATDLAARGLDIPETSHIYNFDLPKS 1278
++ +L+E MN N R +LS++++ G +L+ATD+AARG+D+PET+HIYNF+LP++
Sbjct: 371 -----DILLLEEDMNFNLRAASLSEVKQGGGYLLVATDIAARGVDLPETTHIYNFELPRT 425
Query: 1279 AIHYIHRAGRSGRKPFSEEKCIVTNLLTKDELFVLKQFENTLLFDCHEI 1425
A+ Y+HRAGR+GRKPFS+EKC TN++T +E FVL+++EN L+F+C E+
Sbjct: 426 AVDYLHRAGRTGRKPFSDEKCYATNIITPEERFVLQRYENELMFNCEEL 474
>ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
[Solanum tuberosum]
Length = 462
Score = 483 bits (1243), Expect = e-134
Identities = 243/457 (53%), Positives = 339/457 (74%), Gaps = 5/457 (1%)
Frame = +1
Query: 70 SSLQSRNYLRFPKL-FKPLSIKCTSTKSTLKIDAINDSDSSAQNKTLREICKDKVPHHIL 246
SS+ R PKL F P ++ + + S ++ + S+ TLRE+C V H++
Sbjct: 16 SSINPNVTYRTPKLLFYPKPLRVSFSSSNVETTTLTKDSSTT---TLRELCYGHVQEHVI 72
Query: 247 NRVEELGFLIPTDVQEQSLPIILSGSDCILQAQTGSGKTLAYLLPIFASITGRRASVQAV 426
R EE+G++IPT+VQ Q+LP + SG DC+L AQTGSGKTLAYLL + + + +R++VQA+
Sbjct: 73 RRAEEVGYVIPTEVQLQALPFLFSGRDCVLHAQTGSGKTLAYLLQVLSVVDSQRSAVQAL 132
Query: 427 IVVPTRELGMQVAKVARAVASPSNEGKLEKQNVISIMALLDGGTLKRQSTWLRAEPPQLV 606
IVVPTRELGMQV KVAR +A+ +E + ++ ++MALLDGG LKR +WL+AEPP +V
Sbjct: 133 IVVPTRELGMQVTKVARMLAANPSEHESGLKSC-TVMALLDGGMLKRHKSWLKAEPPTIV 191
Query: 607 VATLGSLCQMVEKGRLKLDALRTLVIDEVDSIFGSDTQVSMLRKVLTSYSSSMKRQTILA 786
VAT+GSLCQM+EK LKLD + LV+DEVD +F S +VS L+++LTSYSSS RQTI A
Sbjct: 192 VATIGSLCQMLEKHILKLDTCQVLVVDEVDFMFNSSKEVSSLKRLLTSYSSSKNRQTIFA 251
Query: 787 SASIPQHRRFVHNCIQHKWTKRDVVHVHVHPIEPMPSRLTHRYVVCQKDEKYKVLLSLII 966
SASIPQHRRF+++C+Q KWT+ DVVHVHV+ +EPMPS L HR+VVC + EK +LLSL+
Sbjct: 252 SASIPQHRRFLYDCMQQKWTRADVVHVHVNSVEPMPSCLHHRFVVCNRTEKNPMLLSLLQ 311
Query: 967 SDAPKSAIVFINEQSIKSKKLGEPPTAETILEFLRESYGQTSGGKSHNDLEVSVLDESMN 1146
+D+P SAI+F++EQS KSKK G P +++FL+ S G+ S +VS+L+E MN
Sbjct: 312 TDSPGSAIIFVSEQSGKSKKAGSAPPTTLLVDFLKSSRGRFS--------DVSLLEEDMN 363
Query: 1147 INERTTALSDMR----KGSCVLIATDLAARGLDIPETSHIYNFDLPKSAIHYIHRAGRSG 1314
N+R +LS++R G +L+ATD+AARG+D+PET+HIYNFD+PK A++Y+HRAGR+G
Sbjct: 364 FNQRAASLSELRGGGGGGGYLLVATDIAARGVDLPETTHIYNFDIPKDAVNYLHRAGRTG 423
Query: 1315 RKPFSEEKCIVTNLLTKDELFVLKQFENTLLFDCHEI 1425
RKPFS++KC VT+++T +E FVL++FEN L+F C ++
Sbjct: 424 RKPFSDKKCFVTSIITVEERFVLQRFENELMFCCEQL 460
>ref|XP_003528676.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X1 [Glycine max]
Length = 472
Score = 483 bits (1242), Expect = e-133
Identities = 244/450 (54%), Positives = 324/450 (72%), Gaps = 3/450 (0%)
Frame = +1
Query: 85 RNYLRFPKLFKP--LSIKCTSTKSTLKIDAINDSDSSAQNKTLREICKDKVPHHILNRVE 258
R+Y F K F ++K + ++ L I + S TLRE+C+ VP HIL R+E
Sbjct: 32 RSYNHFLKHFSSSTTNLKLGTPQAILNTSPI--APSEVTTPTLRELCQSHVPEHILQRME 89
Query: 259 ELGFLIPTDVQEQSLPIILSGSDCILQAQTGSGKTLAYLLPIFASITGRRASVQAVIVVP 438
E+G+++PTD+Q ++LP + SG DCIL AQTGSGKTL YLL I + I ++SVQA+++VP
Sbjct: 90 EIGYVMPTDIQREALPYLFSGLDCILHAQTGSGKTLTYLLLIHSIINAAKSSVQALVLVP 149
Query: 439 TRELGMQVAKVARAVASPSNEGKLEKQNVISIMALLDGGTLKRQSTWLRAEPPQLVVATL 618
TRELGMQV KVAR +A+ G +Q SIMALLDGGTLKR TWL+AEPP +VVAT+
Sbjct: 150 TRELGMQVTKVARTLAAKPT-GVDGEQKSCSIMALLDGGTLKRHKTWLKAEPPTIVVATV 208
Query: 619 GSLCQMVEKGRLKLDALRTLVIDEVDSIFGSDTQVSMLRKVLTSYSSSMKRQTILASASI 798
GSLCQM+E+ L+ +R L++DEVD IF S QVS LRK+LTSYSS RQT+ ASASI
Sbjct: 209 GSLCQMLERHFFSLETVRVLIVDEVDCIFNSSKQVSSLRKILTSYSSCNNRQTVFASASI 268
Query: 799 PQHRRFVHNCIQHKWTKRDVVHVHVHPIEPMPSRLTHRYVVCQKDEKYKVLLSLIISDAP 978
PQH RF+H+ +Q KWTKRDVVH+HV +EPMPSRL HR+V+C K LLSLI SDAP
Sbjct: 269 PQHNRFIHDSVQQKWTKRDVVHIHVSAVEPMPSRLYHRFVICDTKRKLHTLLSLIQSDAP 328
Query: 979 KSAIVFINEQSIKSKKLGEPPTAETILEFLRESYGQTSGGKSHNDLEVSVLDESMNINER 1158
+S I+F+ EQS KSKK G+ P+ +++FL+ SY DL++ +L++ MN N R
Sbjct: 329 ESGIIFVAEQSEKSKKAGKAPSTSLLIDFLKTSY--------QGDLDILLLEDKMNFNSR 380
Query: 1159 TTALSDMRK-GSCVLIATDLAARGLDIPETSHIYNFDLPKSAIHYIHRAGRSGRKPFSEE 1335
+L ++RK G +L+ATD+AARG D+PE SHIYNFDLP++AI Y+HRAGR+ RKPFS+
Sbjct: 381 AASLLEVRKGGGYLLVATDIAARGFDLPEMSHIYNFDLPRTAIDYLHRAGRTCRKPFSDI 440
Query: 1336 KCIVTNLLTKDELFVLKQFENTLLFDCHEI 1425
C VT+++ DE FVL+++EN L+F+C E+
Sbjct: 441 NCTVTSIIVPDERFVLQRYENELMFNCEEL 470
>gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana tabacum]
Length = 466
Score = 482 bits (1241), Expect = e-133
Identities = 254/462 (54%), Positives = 343/462 (74%), Gaps = 5/462 (1%)
Frame = +1
Query: 55 STNHISSLQSRNYL-RFPKLF---KPLSIKCTSTKSTLKIDAINDSDSSAQNKTLREICK 222
S N S NY R PK KPL ++ ST I+A ++ S+ T RE+C
Sbjct: 17 SLNRTSHHFKPNYTYRTPKFLFRQKPL----IASFSTSDIEARTETKDSS-TATPRELCH 71
Query: 223 DKVPHHILNRVEELGFLIPTDVQEQSLPIILSGSDCILQAQTGSGKTLAYLLPIFASITG 402
VP H++ RVEE+G++IPT+VQ +LP + SG DC+L AQTGSGKTLAYLL + + I
Sbjct: 72 GHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSGKTLAYLLQMLSVIDS 131
Query: 403 RRASVQAVIVVPTRELGMQVAKVARAVASPSNEGKLEKQNVISIMALLDGGTLKRQSTWL 582
+R++VQA+IVVPTRELGMQV KVAR +A+ +E K ++ ++MALLDGG L R +WL
Sbjct: 132 QRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSGPKSC-TVMALLDGGMLNRHKSWL 190
Query: 583 RAEPPQLVVATLGSLCQMVEKGRLKLDALRTLVIDEVDSIFGSDTQVSMLRKVLTSYSSS 762
+AEPP +VVAT+GSLCQM+EK LKLD+ + LV+DEVD +F S ++S L+++LTSYSSS
Sbjct: 191 KAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFMFNSSKEISSLKRLLTSYSSS 250
Query: 763 MKRQTILASASIPQHRRFVHNCIQHKWTKRDVVHVHVHPIEPMPSRLTHRYVVCQKDEKY 942
RQTI ASASIPQHRRF+++C+Q KWTK DVVHVHV+ +EPMPS L HR+VVC K EK
Sbjct: 251 KNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHVNSVEPMPSCLHHRFVVCTKREKN 310
Query: 943 KVLLSLIISDAPKSAIVFINEQSIKSKKLGEPPTAETILEFLRESYGQTSGGKSHNDLEV 1122
+VLLSL+ D+P+SAI+F++EQS KSKK G P +++FL S SGG S+ V
Sbjct: 311 QVLLSLLQVDSPESAIIFVSEQSEKSKKAGNAPPITLLVDFLMSS----SGGFSN----V 362
Query: 1123 SVLDESMNINERTTALSDMR-KGSCVLIATDLAARGLDIPETSHIYNFDLPKSAIHYIHR 1299
S+L+E MN N+R +LS++R G +L+ATD+AARG+D+PET+HIYNFD+PK A++Y+HR
Sbjct: 363 SLLEEDMNFNKRAASLSELRGGGGYLLVATDIAARGVDLPETTHIYNFDIPKDAVNYLHR 422
Query: 1300 AGRSGRKPFSEEKCIVTNLLTKDELFVLKQFENTLLFDCHEI 1425
AGR+GRKPFS++KC VT+++T +E FVL++FEN L+F C ++
Sbjct: 423 AGRTGRKPFSDKKCFVTSIITVEERFVLQRFENELMFCCEQL 464