BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00014125
         (574 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN40817.1| unknown [Picea sitchensis]                              64   3e-08
ref|XP_003526036.1| PREDICTED: uncharacterized protein LOC100809...    63   6e-08
gb|AFK48970.1| unknown [Lotus japonicus]                               62   8e-08
gb|ESW08854.1| hypothetical protein PHAVU_009G079800g [Phaseolus...    62   1e-07
ref|XP_004501453.1| PREDICTED: U1 small nuclear ribonucleoprotei...    61   2e-07
ref|XP_004303492.1| PREDICTED: uncharacterized protein LOC101308...    60   4e-07
ref|NP_001242381.1| uncharacterized protein LOC100816255 [Glycin...    60   4e-07
gb|ABK22259.1| unknown [Picea sitchensis]                              59   9e-07
ref|XP_006474441.1| PREDICTED: U1 small nuclear ribonucleoprotei...    58   2e-06
ref|XP_006474440.1| PREDICTED: U1 small nuclear ribonucleoprotei...    58   2e-06
ref|XP_006474439.1| PREDICTED: U1 small nuclear ribonucleoprotei...    58   2e-06
ref|XP_003603172.1| RNA-binding protein with multiple splicing [...    58   2e-06
ref|XP_006474442.1| PREDICTED: U1 small nuclear ribonucleoprotei...    58   2e-06
ref|XP_006453055.1| hypothetical protein CICLE_v10009319mg [Citr...    56   6e-06
gb|ADR79706.1| RNA binding protein U620 [Marsilea vestita]             56   6e-06
ref|XP_002308540.2| hypothetical protein POPTR_0006s24130g [Popu...    55   1e-05
gb|EOY29962.1| RNA-binding family protein isoform 1 [Theobroma c...    55   1e-05
ref|XP_004141330.1| PREDICTED: uncharacterized protein LOC101211...    55   1e-05

>gb|ACN40817.1| unknown [Picea sitchensis]
          Length = 308

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
 Frame = -3

Query: 572 LCFVEFVDEKSALTALNALQGYKFDASESD-SNGLKIQLVHFPGTQP 435
           LCFVEF D K ALTAL+AL+GYKFD  E D S+ LK+QL +FPG++P
Sbjct: 250 LCFVEFTDAKCALTALSALKGYKFDEHEHDSSSSLKLQLANFPGSRP 296


>ref|XP_003526036.1| PREDICTED: uncharacterized protein LOC100809186 [Glycine max]
          Length = 228

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 30/46 (65%), Positives = 33/46 (71%)
 Frame = -3

Query: 572 LCFVEFVDEKSALTALNALQGYKFDASESDSNGLKIQLVHFPGTQP 435
           LCFVEFVD K ALTA+ ALQGYKFD  + DS  LKI+  HFP   P
Sbjct: 167 LCFVEFVDSKCALTAMEALQGYKFDDKKPDSPTLKIEFAHFPFRLP 212


>gb|AFK48970.1| unknown [Lotus japonicus]
          Length = 229

 Score = 62.4 bits (150), Expect = 8e-08
 Identities = 30/46 (65%), Positives = 32/46 (69%)
 Frame = -3

Query: 572 LCFVEFVDEKSALTALNALQGYKFDASESDSNGLKIQLVHFPGTQP 435
           LCFVEF D K ALTA+ ALQGYKFD  + DS  LKIQ  HFP   P
Sbjct: 176 LCFVEFDDSKCALTAMEALQGYKFDDKKPDSRTLKIQFAHFPFRPP 221


>gb|ESW08854.1| hypothetical protein PHAVU_009G079800g [Phaseolus vulgaris]
          Length = 218

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 31/46 (67%), Positives = 32/46 (69%)
 Frame = -3

Query: 572 LCFVEFVDEKSALTALNALQGYKFDASESDSNGLKIQLVHFPGTQP 435
           LCFVEF+D K ALTAL ALQGYKFD    DS  LKIQ  HFP   P
Sbjct: 164 LCFVEFLDSKCALTALEALQGYKFDDKLPDSPTLKIQFAHFPFRLP 209


>ref|XP_004501453.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cicer
           arietinum]
          Length = 226

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 29/46 (63%), Positives = 33/46 (71%)
 Frame = -3

Query: 572 LCFVEFVDEKSALTALNALQGYKFDASESDSNGLKIQLVHFPGTQP 435
           LCFVEF + K ALTA+ ALQGYKFD  + DS+ LKIQ  HFP   P
Sbjct: 176 LCFVEFTEPKCALTAMEALQGYKFDDKKPDSSILKIQFAHFPFRPP 221


>ref|XP_004303492.1| PREDICTED: uncharacterized protein LOC101308481 [Fragaria vesca
           subsp. vesca]
          Length = 288

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 29/46 (63%), Positives = 33/46 (71%)
 Frame = -3

Query: 572 LCFVEFVDEKSALTALNALQGYKFDASESDSNGLKIQLVHFPGTQP 435
           LCFVEFVD K ALTA+ ALQGYKFD  + +S  L+IQ  HFP   P
Sbjct: 231 LCFVEFVDPKCALTAMEALQGYKFDDKKPNSLPLRIQFAHFPFRLP 276


>ref|NP_001242381.1| uncharacterized protein LOC100816255 [Glycine max]
           gi|255647054|gb|ACU23995.1| unknown [Glycine max]
          Length = 220

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 30/46 (65%), Positives = 31/46 (67%)
 Frame = -3

Query: 572 LCFVEFVDEKSALTALNALQGYKFDASESDSNGLKIQLVHFPGTQP 435
           LCFVEFVD   ALTAL  LQGYKFD  + DS  LKIQ  HFP   P
Sbjct: 166 LCFVEFVDSNCALTALETLQGYKFDDKKPDSPTLKIQPAHFPFRLP 211


>gb|ABK22259.1| unknown [Picea sitchensis]
          Length = 274

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 25/43 (58%), Positives = 32/43 (74%)
 Frame = -3

Query: 572 LCFVEFVDEKSALTALNALQGYKFDASESDSNGLKIQLVHFPG 444
           LCFV+F D + A TAL ALQGYKFD ++ +S GL++Q   FPG
Sbjct: 204 LCFVDFTDARCAATALEALQGYKFDETDRESTGLRLQFARFPG 246


>ref|XP_006474441.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X3
           [Citrus sinensis]
          Length = 242

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/46 (60%), Positives = 31/46 (67%)
 Frame = -3

Query: 572 LCFVEFVDEKSALTALNALQGYKFDASESDSNGLKIQLVHFPGTQP 435
           LCFVEF D K A TA++AL GYKFD  + DS  LKIQ  HFP   P
Sbjct: 187 LCFVEFDDPKCARTAMDALHGYKFDDKKPDSPALKIQFAHFPFRLP 232


>ref|XP_006474440.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X2
           [Citrus sinensis]
          Length = 276

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/46 (60%), Positives = 31/46 (67%)
 Frame = -3

Query: 572 LCFVEFVDEKSALTALNALQGYKFDASESDSNGLKIQLVHFPGTQP 435
           LCFVEF D K A TA++AL GYKFD  + DS  LKIQ  HFP   P
Sbjct: 221 LCFVEFDDPKCARTAMDALHGYKFDDKKPDSPALKIQFAHFPFRLP 266


>ref|XP_006474439.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X1
           [Citrus sinensis]
          Length = 287

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/46 (60%), Positives = 31/46 (67%)
 Frame = -3

Query: 572 LCFVEFVDEKSALTALNALQGYKFDASESDSNGLKIQLVHFPGTQP 435
           LCFVEF D K A TA++AL GYKFD  + DS  LKIQ  HFP   P
Sbjct: 232 LCFVEFDDPKCARTAMDALHGYKFDDKKPDSPALKIQFAHFPFRLP 277


>ref|XP_003603172.1| RNA-binding protein with multiple splicing [Medicago truncatula]
           gi|355492220|gb|AES73423.1| RNA-binding protein with
           multiple splicing [Medicago truncatula]
          Length = 229

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/45 (60%), Positives = 31/45 (68%)
 Frame = -3

Query: 569 CFVEFVDEKSALTALNALQGYKFDASESDSNGLKIQLVHFPGTQP 435
           CFVEF + K ALTA+ ALQGYKFD  + DS  LKI+  HFP   P
Sbjct: 180 CFVEFTEPKCALTAMEALQGYKFDDKKPDSPTLKIKFAHFPFRPP 224


>ref|XP_006474442.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X4
           [Citrus sinensis] gi|343887275|dbj|BAK61821.1|
           RRM-containing protein [Citrus unshiu]
          Length = 231

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/46 (60%), Positives = 31/46 (67%)
 Frame = -3

Query: 572 LCFVEFVDEKSALTALNALQGYKFDASESDSNGLKIQLVHFPGTQP 435
           LCFVEF D K A TA++AL GYKFD  + DS  LKIQ  HFP   P
Sbjct: 176 LCFVEFDDPKCARTAMDALHGYKFDDKKPDSPALKIQFAHFPFRLP 221


>ref|XP_006453055.1| hypothetical protein CICLE_v10009319mg [Citrus clementina]
           gi|557556281|gb|ESR66295.1| hypothetical protein
           CICLE_v10009319mg [Citrus clementina]
          Length = 242

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 27/42 (64%), Positives = 30/42 (71%)
 Frame = -3

Query: 572 LCFVEFVDEKSALTALNALQGYKFDASESDSNGLKIQLVHFP 447
           LCFVEF D K A TA++AL GYKFD  + DS  LKIQ  HFP
Sbjct: 187 LCFVEFDDPKCARTAMDALYGYKFDDKKPDSPTLKIQFAHFP 228


>gb|ADR79706.1| RNA binding protein U620 [Marsilea vestita]
          Length = 118

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 25/46 (54%), Positives = 33/46 (71%)
 Frame = -3

Query: 572 LCFVEFVDEKSALTALNALQGYKFDASESDSNGLKIQLVHFPGTQP 435
           LCFV+F D K A  AL ALQGYKFD ++ +S  L++Q   FPG++P
Sbjct: 50  LCFVDFTDPKCASIALEALQGYKFDETDRNSETLRLQYSRFPGSRP 95


>ref|XP_002308540.2| hypothetical protein POPTR_0006s24130g [Populus trichocarpa]
           gi|550336974|gb|EEE92063.2| hypothetical protein
           POPTR_0006s24130g [Populus trichocarpa]
          Length = 476

 Score = 55.5 bits (132), Expect = 1e-05
 Identities = 27/46 (58%), Positives = 29/46 (63%)
 Frame = -3

Query: 572 LCFVEFVDEKSALTALNALQGYKFDASESDSNGLKIQLVHFPGTQP 435
           LCFVEF D   A TA+ ALQGYKFD  + DS  LKIQ   FP   P
Sbjct: 220 LCFVEFTDANCAATAMEALQGYKFDDKKPDSPTLKIQFARFPFRPP 265


>gb|EOY29962.1| RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 410

 Score = 55.5 bits (132), Expect = 1e-05
 Identities = 25/42 (59%), Positives = 29/42 (69%)
 Frame = -3

Query: 572 LCFVEFVDEKSALTALNALQGYKFDASESDSNGLKIQLVHFP 447
           LCFVEF D K A  A+ ALQGYKFD  + DS  L++Q  HFP
Sbjct: 355 LCFVEFHDSKFARAAMQALQGYKFDDKKPDSPALRVQFAHFP 396


>ref|XP_004141330.1| PREDICTED: uncharacterized protein LOC101211987 [Cucumis sativus]
           gi|449486681|ref|XP_004157367.1| PREDICTED:
           uncharacterized protein LOC101228687 [Cucumis sativus]
          Length = 246

 Score = 55.5 bits (132), Expect = 1e-05
 Identities = 26/42 (61%), Positives = 30/42 (71%)
 Frame = -3

Query: 572 LCFVEFVDEKSALTALNALQGYKFDASESDSNGLKIQLVHFP 447
           LCFVEFV+ K +  A+ ALQGYKFD  + DS  LKIQ  HFP
Sbjct: 194 LCFVEFVEAKFSQAAMEALQGYKFDDKKPDSPVLKIQFAHFP 235