BLASTX nr result
ID: Ephedra27_contig00014013
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00014013
(438 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK25119.1| unknown [Picea sitchensis] 82 6e-14
ref|XP_004150392.1| PREDICTED: eukaryotic translation initiation... 81 2e-13
gb|EXC18772.1| Eukaryotic translation initiation factor 3 subuni... 80 4e-13
ref|XP_004160247.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t... 80 4e-13
ref|XP_004139759.1| PREDICTED: eukaryotic translation initiation... 79 5e-13
ref|XP_006855977.1| hypothetical protein AMTR_s00037p00235640 [A... 79 6e-13
gb|EMJ09256.1| hypothetical protein PRUPE_ppa002067mg [Prunus pe... 76 5e-12
ref|XP_006371769.1| Eukaryotic translation initiation factor 3 s... 75 9e-12
ref|XP_003529057.1| PREDICTED: eukaryotic translation initiation... 75 9e-12
ref|XP_006495404.1| PREDICTED: eukaryotic translation initiation... 75 1e-11
ref|XP_006483512.1| PREDICTED: eukaryotic translation initiation... 75 1e-11
ref|XP_006450239.1| hypothetical protein CICLE_v100076091mg, par... 75 1e-11
ref|NP_568498.1| translation initiation factor 3 subunit B [Arab... 74 2e-11
sp|P56821.1|EIF3B_TOBAC RecName: Full=Eukaryotic translation ini... 74 2e-11
ref|XP_006354613.1| PREDICTED: eukaryotic translation initiation... 74 2e-11
gb|ESW08904.1| hypothetical protein PHAVU_009G0841000g, partial ... 74 2e-11
ref|NP_001031954.1| translation initiation factor 3 subunit B [A... 74 2e-11
ref|XP_006841801.1| hypothetical protein AMTR_s00003p00268400 [A... 73 3e-11
ref|XP_003522102.1| PREDICTED: eukaryotic translation initiation... 73 3e-11
ref|XP_002285591.1| PREDICTED: eukaryotic translation initiation... 73 3e-11
>gb|ABK25119.1| unknown [Picea sitchensis]
Length = 724
Score = 82.4 bits (202), Expect = 6e-14
Identities = 44/82 (53%), Positives = 53/82 (64%)
Frame = -3
Query: 247 MEVQMPMLALNEDNSLPINSIDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXSGF 68
+E+ +P+ N + +IDFS VDLDSI+LPPG+DFGI GF
Sbjct: 4 IEMPLPVPVHRLGNDIQQLNIDFSNVDLDSIQLPPGEDFGIKSEDEEEEEDSLEFET-GF 62
Query: 67 GNIIVVDNLPVVPPEKFEKLEG 2
GNI+VVDNLPVVPPEKFEKLEG
Sbjct: 63 GNIVVVDNLPVVPPEKFEKLEG 84
>ref|XP_004150392.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
B-like [Cucumis sativus]
Length = 718
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = -3
Query: 187 IDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXSGFGNIIVVDNLPVVPPEKFEKL 8
ID S+VD D+IRLPPG+DFGI SGFGNIIVVDNLPVVPPEKFEKL
Sbjct: 19 IDLSQVDFDAIRLPPGEDFGIISDDEEVLQEESLEFDSGFGNIIVVDNLPVVPPEKFEKL 78
Query: 7 EG 2
EG
Sbjct: 79 EG 80
>gb|EXC18772.1| Eukaryotic translation initiation factor 3 subunit B [Morus
notabilis]
Length = 714
Score = 79.7 bits (195), Expect = 4e-13
Identities = 43/76 (56%), Positives = 48/76 (63%)
Frame = -3
Query: 229 MLALNEDNSLPINSIDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXSGFGNIIVV 50
ML D++ ID S++D DSIRLPPG+DFGI SGFGNIIVV
Sbjct: 5 MLMKEIDDTAASLGIDLSQIDFDSIRLPPGEDFGIKSDDEDVYRDENLEFDSGFGNIIVV 64
Query: 49 DNLPVVPPEKFEKLEG 2
DNLPVVP EKFEKLEG
Sbjct: 65 DNLPVVPREKFEKLEG 80
>ref|XP_004160247.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
factor 3 subunit B-like [Cucumis sativus]
Length = 718
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/62 (64%), Positives = 44/62 (70%)
Frame = -3
Query: 187 IDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXSGFGNIIVVDNLPVVPPEKFEKL 8
ID S+VD D+IRLPPG+DFGI SGFGNIIVVDNLPVVPPEKF+KL
Sbjct: 19 IDLSQVDFDAIRLPPGEDFGIISDDEEVLQEESLEFDSGFGNIIVVDNLPVVPPEKFDKL 78
Query: 7 EG 2
EG
Sbjct: 79 EG 80
>ref|XP_004139759.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
B-like [Cucumis sativus]
Length = 718
Score = 79.3 bits (194), Expect = 5e-13
Identities = 43/76 (56%), Positives = 49/76 (64%)
Frame = -3
Query: 229 MLALNEDNSLPINSIDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXSGFGNIIVV 50
ML ++S ID S+VD D+IRLPPG++FGI SGFGNIIVV
Sbjct: 5 MLMKEIEDSAGRLGIDLSQVDFDAIRLPPGENFGIISDDEEVLQEESLEFDSGFGNIIVV 64
Query: 49 DNLPVVPPEKFEKLEG 2
DNLPVVPPEKFEKLEG
Sbjct: 65 DNLPVVPPEKFEKLEG 80
>ref|XP_006855977.1| hypothetical protein AMTR_s00037p00235640 [Amborella trichopoda]
gi|548859798|gb|ERN17444.1| hypothetical protein
AMTR_s00037p00235640 [Amborella trichopoda]
Length = 719
Score = 79.0 bits (193), Expect = 6e-13
Identities = 42/82 (51%), Positives = 52/82 (63%)
Frame = -3
Query: 250 AMEVQMPMLALNEDNSLPINSIDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXSG 71
AME+ +P L + + ++ ID S +DLDSI LPPGDDFGI SG
Sbjct: 4 AMELPLPAHHLGSSSLIDVSKIDISNIDLDSIHLPPGDDFGI-PSDDDVVAEEELEFDSG 62
Query: 70 FGNIIVVDNLPVVPPEKFEKLE 5
FG+II+VDNLPVV PEK+EKLE
Sbjct: 63 FGSIIIVDNLPVVAPEKYEKLE 84
>gb|EMJ09256.1| hypothetical protein PRUPE_ppa002067mg [Prunus persica]
Length = 722
Score = 75.9 bits (185), Expect = 5e-12
Identities = 39/61 (63%), Positives = 43/61 (70%)
Frame = -3
Query: 187 IDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXSGFGNIIVVDNLPVVPPEKFEKL 8
ID S++DLDSIRLPPG+DFGI SGFGNIIVVDNLPVVP EK+EKL
Sbjct: 19 IDLSQLDLDSIRLPPGEDFGIISDDEDIYQEENSELDSGFGNIIVVDNLPVVPKEKYEKL 78
Query: 7 E 5
E
Sbjct: 79 E 79
>ref|XP_006371769.1| Eukaryotic translation initiation factor 3 subunit 9 family protein
[Populus trichocarpa] gi|550317909|gb|ERP49566.1|
Eukaryotic translation initiation factor 3 subunit 9
family protein [Populus trichocarpa]
Length = 718
Score = 75.1 bits (183), Expect = 9e-12
Identities = 41/79 (51%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = -3
Query: 235 MPMLALNE-DNSLPINSIDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXSGFGNI 59
M ++LNE + ID S++DLDSI+LPPGDDFGI G GN
Sbjct: 1 MGEISLNELEARADAAGIDLSQIDLDSIQLPPGDDFGIISDDEDVYQEEQMDFDYGLGNT 60
Query: 58 IVVDNLPVVPPEKFEKLEG 2
IVVDNLPVVP EKF+KLEG
Sbjct: 61 IVVDNLPVVPKEKFDKLEG 79
>ref|XP_003529057.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
B-like [Glycine max]
Length = 718
Score = 75.1 bits (183), Expect = 9e-12
Identities = 41/71 (57%), Positives = 47/71 (66%)
Frame = -3
Query: 214 EDNSLPINSIDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXSGFGNIIVVDNLPV 35
ED +L + +D S +DLD+IRLPPG+D GI SGFGNIIVVDNLPV
Sbjct: 11 EDTALRLG-VDLSTLDLDAIRLPPGEDCGIVSDDEVVYQEENLEFESGFGNIIVVDNLPV 69
Query: 34 VPPEKFEKLEG 2
VP EKFEKLEG
Sbjct: 70 VPREKFEKLEG 80
>ref|XP_006495404.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
B-like [Citrus sinensis]
Length = 129
Score = 74.7 bits (182), Expect = 1e-11
Identities = 43/77 (55%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = -3
Query: 229 MLALNE-DNSLPINSIDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXSGFGNIIV 53
+L +NE D + ID +VDLDSI+LPPG+D GI SGFGNIIV
Sbjct: 4 VLIMNEIDATANRLGIDLLQVDLDSIQLPPGEDLGIISDDEDVYEDDDQEVESGFGNIIV 63
Query: 52 VDNLPVVPPEKFEKLEG 2
VDNLPVVP EKFEKLEG
Sbjct: 64 VDNLPVVPKEKFEKLEG 80
>ref|XP_006483512.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
B-like [Citrus sinensis]
Length = 712
Score = 74.7 bits (182), Expect = 1e-11
Identities = 43/77 (55%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = -3
Query: 229 MLALNE-DNSLPINSIDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXSGFGNIIV 53
+L +NE D + ID +VDLDSI+LPPG+D GI SGFGNIIV
Sbjct: 4 VLIMNEIDATANRLGIDLLQVDLDSIQLPPGEDLGIISDDEDVYEDDDQEVESGFGNIIV 63
Query: 52 VDNLPVVPPEKFEKLEG 2
VDNLPVVP EKFEKLEG
Sbjct: 64 VDNLPVVPKEKFEKLEG 80
>ref|XP_006450239.1| hypothetical protein CICLE_v100076091mg, partial [Citrus
clementina] gi|557553465|gb|ESR63479.1| hypothetical
protein CICLE_v100076091mg, partial [Citrus clementina]
Length = 120
Score = 74.7 bits (182), Expect = 1e-11
Identities = 43/77 (55%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = -3
Query: 229 MLALNE-DNSLPINSIDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXSGFGNIIV 53
+L +NE D + ID +VDLDSI+LPPG+D GI SGFGNIIV
Sbjct: 4 VLIMNEIDATANRLGIDLLQVDLDSIQLPPGEDLGIISDDEDVYEDDDQEVESGFGNIIV 63
Query: 52 VDNLPVVPPEKFEKLEG 2
VDNLPVVP EKFEKLEG
Sbjct: 64 VDNLPVVPKEKFEKLEG 80
>ref|NP_568498.1| translation initiation factor 3 subunit B [Arabidopsis thaliana]
gi|23396618|sp|Q9C5Z1.1|EIF3B_ARATH RecName:
Full=Eukaryotic translation initiation factor 3 subunit
B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName:
Full=eIF3 p110; AltName: Full=p82
gi|12407662|gb|AAG53615.1|AF285834_1 eukaryotic
initiation factor 3B1 subunit [Arabidopsis thaliana]
gi|14190411|gb|AAK55686.1|AF378883_1
AT5g27640/F15A18_100 [Arabidopsis thaliana]
gi|20857380|gb|AAM26716.1| AT5g27640/F15A18_100
[Arabidopsis thaliana] gi|332006326|gb|AED93709.1|
translation initiation factor 3 subunit B [Arabidopsis
thaliana]
Length = 712
Score = 73.9 bits (180), Expect = 2e-11
Identities = 37/62 (59%), Positives = 44/62 (70%)
Frame = -3
Query: 187 IDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXSGFGNIIVVDNLPVVPPEKFEKL 8
ID+S+V+ DSI+LPPG+DFGI +GFGNIIVVD+LPVVP EKFEKL
Sbjct: 15 IDWSQVNFDSIQLPPGEDFGIESDDEAVYQDDQSEFDTGFGNIIVVDHLPVVPKEKFEKL 74
Query: 7 EG 2
EG
Sbjct: 75 EG 76
>sp|P56821.1|EIF3B_TOBAC RecName: Full=Eukaryotic translation initiation factor 3 subunit B;
Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3
p110 gi|5911685|emb|CAA72721.1| PRT1 protein [Nicotiana
tabacum]
Length = 719
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/62 (58%), Positives = 42/62 (67%)
Frame = -3
Query: 187 IDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXSGFGNIIVVDNLPVVPPEKFEKL 8
+D S++DLDSI LPPG+D GI +GFGNI+VVDNLPVVP EKFEKL
Sbjct: 19 VDLSQIDLDSIHLPPGEDCGIPSDDDDLMEEDPLEFDAGFGNILVVDNLPVVPKEKFEKL 78
Query: 7 EG 2
EG
Sbjct: 79 EG 80
>ref|XP_006354613.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
B-like [Solanum tuberosum]
Length = 717
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/62 (56%), Positives = 41/62 (66%)
Frame = -3
Query: 187 IDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXSGFGNIIVVDNLPVVPPEKFEKL 8
+D +++DLDSI LPPGDD GI GFGNI+VVDNLPVVP EK+EKL
Sbjct: 19 VDLTQIDLDSIHLPPGDDLGIPSDDEDLLEEDALEEDQGFGNILVVDNLPVVPKEKYEKL 78
Query: 7 EG 2
EG
Sbjct: 79 EG 80
>gb|ESW08904.1| hypothetical protein PHAVU_009G0841000g, partial [Phaseolus
vulgaris]
Length = 567
Score = 73.9 bits (180), Expect = 2e-11
Identities = 40/71 (56%), Positives = 47/71 (66%)
Frame = -3
Query: 214 EDNSLPINSIDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXSGFGNIIVVDNLPV 35
ED +L + +D S +DLDS+RLPPG++ GI SGFGNIIVVDNLPV
Sbjct: 11 EDTALRLG-LDLSTLDLDSVRLPPGENCGIVSDDDEVYQEDNLEFESGFGNIIVVDNLPV 69
Query: 34 VPPEKFEKLEG 2
VP EKFEKLEG
Sbjct: 70 VPKEKFEKLEG 80
>ref|NP_001031954.1| translation initiation factor 3 subunit B [Arabidopsis thaliana]
gi|332006327|gb|AED93710.1| translation initiation
factor 3 subunit B [Arabidopsis thaliana]
Length = 738
Score = 73.9 bits (180), Expect = 2e-11
Identities = 37/62 (59%), Positives = 44/62 (70%)
Frame = -3
Query: 187 IDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXSGFGNIIVVDNLPVVPPEKFEKL 8
ID+S+V+ DSI+LPPG+DFGI +GFGNIIVVD+LPVVP EKFEKL
Sbjct: 15 IDWSQVNFDSIQLPPGEDFGIESDDEAVYQDDQSEFDTGFGNIIVVDHLPVVPKEKFEKL 74
Query: 7 EG 2
EG
Sbjct: 75 EG 76
>ref|XP_006841801.1| hypothetical protein AMTR_s00003p00268400 [Amborella trichopoda]
gi|548843822|gb|ERN03476.1| hypothetical protein
AMTR_s00003p00268400 [Amborella trichopoda]
Length = 718
Score = 73.2 bits (178), Expect = 3e-11
Identities = 40/82 (48%), Positives = 51/82 (62%)
Frame = -3
Query: 250 AMEVQMPMLALNEDNSLPINSIDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXSG 71
AME+ +P L + + ++ ID S +DL+SI+LPPGDD+GI SG
Sbjct: 4 AMELPLPAHHLGSSSLIDVSKIDISNIDLESIQLPPGDDYGI-PSDDDVVEEEALEFDSG 62
Query: 70 FGNIIVVDNLPVVPPEKFEKLE 5
F NII+V NLPVV PEKFEKLE
Sbjct: 63 FENIIIVYNLPVVAPEKFEKLE 84
>ref|XP_003522102.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
B-like [Glycine max]
Length = 718
Score = 73.2 bits (178), Expect = 3e-11
Identities = 41/71 (57%), Positives = 46/71 (64%)
Frame = -3
Query: 214 EDNSLPINSIDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXSGFGNIIVVDNLPV 35
ED SL + +D S +DLD+IRLP G+D GI SGFGNIIVVDNLPV
Sbjct: 11 EDTSLRLG-VDLSTLDLDAIRLPTGEDCGIVSDDEEVYQEENLEFESGFGNIIVVDNLPV 69
Query: 34 VPPEKFEKLEG 2
VP EKFEKLEG
Sbjct: 70 VPREKFEKLEG 80
>ref|XP_002285591.1| PREDICTED: eukaryotic translation initiation factor 3 subunit B
[Vitis vinifera] gi|296082169|emb|CBI21174.3| unnamed
protein product [Vitis vinifera]
Length = 718
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/62 (62%), Positives = 41/62 (66%)
Frame = -3
Query: 187 IDFSRVDLDSIRLPPGDDFGIXXXXXXXXXXXXXXXXSGFGNIIVVDNLPVVPPEKFEKL 8
ID S +D DSIRLPPG+DFGI GFGNIIVVDNLPVVP EKFEKL
Sbjct: 19 IDVSNIDFDSIRLPPGEDFGITSDDDLHEEDPLEYDS-GFGNIIVVDNLPVVPREKFEKL 77
Query: 7 EG 2
EG
Sbjct: 78 EG 79