BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00013914
         (2584 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   251   e-128
gb|AGW47867.1| polyprotein [Phaseolus vulgaris]                       239   e-124
emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]   232   e-109
ref|XP_003240529.1| PREDICTED: copia protein-like [Acyrthosiphon...   206   e-101
gb|AAO73525.1| gag-pol polyprotein [Glycine max]                      212   e-101
emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera]   220   e-100
gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha...   199   1e-96
emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group]         231   1e-95
gb|AAR96231.1| putative integrase [Oryza sativa Japonica Group] ...   233   4e-95
gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subc...   195   2e-93
ref|XP_003375245.1| putative integrase core domain protein [Tric...   192   2e-93
ref|XP_003370196.1| putative integrase core domain protein [Tric...   192   2e-93
emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]   188   1e-92
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]               208   2e-92
gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subc...   212   4e-92
emb|CAN68682.1| hypothetical protein VITISV_024814 [Vitis vinifera]   201   1e-88
gb|AAT38005.1| putative polyprotein [Oryza sativa Japonica Group...   188   4e-88
gb|EFA06256.1| hypothetical protein TcasGA2_TC009115 [Tribolium ...   178   5e-86
emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera]   188   2e-84
ref|XP_001813413.1| PREDICTED: similar to copia-type polyprotein...   178   8e-83

>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  251 bits (640), Expect(2) = e-128
 Identities = 152/390 (38%), Positives = 218/390 (55%), Gaps = 14/390 (3%)
 Frame = -1

Query: 2134 FHKKLGHLNYKYLHI--SKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*GF-RAKKF 1964
            +H + GHLN+  L +   K+ + G P  I+ P Q CE C++GK  K+ FP     RA+K 
Sbjct: 468  WHLRFGHLNFGGLELLSRKEMVRGLPC-INHPNQVCEGCLLGKQFKMSFPKESSSRAQKP 526

Query: 1963 LELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEK 1784
            LELIH+D+CG +  K+     YF+ FIDD+SR  WVY LK K +VF+ F KF+  V+ E 
Sbjct: 527  LELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKES 586

Query: 1783 SYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLL 1604
               I  +RSD G E+ S  F  +CE+ GI+RQ+TVP +PQQNGV+ER NRT++E  R +L
Sbjct: 587  GLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSML 646

Query: 1603 HDANLDKTWWGEALLTTNYITNHWPNKALHMKSPIEMWYGVKPNISHFMEFGKTYYYLIP 1424
                L K  W EA+    Y+ N  P K++  K+P E W G KP +SH   FG   +  +P
Sbjct: 647  KSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVP 706

Query: 1423 KEKWRKLDDKAKKGIFIGYPTGTKGYRLIDMETRNIIISREIK---------EADTESYE 1271
             EK  KLDDK++K IFIGY   +KGY+L + +T+  IISR I           ++ E Y 
Sbjct: 707  DEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYN 766

Query: 1270 YDKTIQQNAPK--NKNLLDKIETTIPKGFKK*PLWYRLMM*EAENFIKEKTIEANICFPI 1097
            +    +++ P+   +    +  TT P                  + I+EK      C P+
Sbjct: 767  FFPHFEEDKPEPTREEPPSEEPTTPPTS-------------PTSSQIEEK------CEPM 807

Query: 1096 DLAIPKSPTEAIKKQHWKNAMDEEMTNMKK 1007
            D        EAI+K+ W+NAMDEE+ +++K
Sbjct: 808  DF------QEAIEKKTWRNAMDEEIKSIQK 831



 Score =  239 bits (609), Expect(2) = e-128
 Identities = 120/344 (34%), Positives = 209/344 (60%), Gaps = 8/344 (2%)
 Frame = -2

Query: 1011 KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 832
            K + W L  LP G + +G +W+Y  K    G +++YK+R+V +G+SQ+ GIDY + F P 
Sbjct: 831  KNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPV 890

Query: 831  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCY--EDQNNLSCKILK 664
            A+++T++ IISLA +  W++H    KSAFLNG++ EE+Y++ P+ Y  + + +   ++ K
Sbjct: 891  ARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKK 950

Query: 663  SLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLA-FHVXXXXXXXXX 487
            +LYGLK APRAW  +++ +   + F K   + +  YI     ++L+A  +V         
Sbjct: 951  ALYGLKQAPRAWNTRIDKYFKEKDFIKCPYE-HALYIKIQKEDILIACLYVDDLIFTGNN 1009

Query: 486  XXXXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNG 307
                 +FK+++ +EFE+TD+G +  YLG+++ + +NG  + QE YA ++++++ + +SN 
Sbjct: 1010 PSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNP 1069

Query: 306  RKYPLDSGAKLG---EDEAANIKDYQALIGSLIYLTNTRLDIQYPVSLLARAMHNPCKSH 136
               P++ G KL    E E  +   +++L+GSL YLT TR DI Y V +++R M +P  +H
Sbjct: 1070 VCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTH 1129

Query: 135  SKVVMGILQYIKGTLSLGLKFMKNDDLTIESYCDANFGKDEEGK 4
             K    IL+YIKGT++ GL +    D  +  Y D+++G D + +
Sbjct: 1130 FKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDR 1173


>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
          Length = 1471

 Score =  239 bits (609), Expect(2) = e-124
 Identities = 137/380 (36%), Positives = 220/380 (57%), Gaps = 9/380 (2%)
 Frame = -1

Query: 2134 FHKKLGHLNYKYL-HISKQNL-DGSPNKISIPKQNCESCVIGKHHKLPFPT*G-FRAKKF 1964
            +H + GHL++  L  ++K+N+  G PN +    + CE CV+ KH +  FP    + AK+ 
Sbjct: 489  WHLRFGHLHHGGLKELAKKNMVHGLPN-MDYEGKFCEECVLSKHVRTSFPKKAQYWAKQP 547

Query: 1963 LELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEK 1784
            LELIH+DICG +  ++     YFITFIDD+SR  WVY LK K + F+ F KF+ +V+   
Sbjct: 548  LELIHTDICGPITPESFSGKRYFITFIDDFSRKTWVYFLKEKSEAFEVFKKFKVMVERTT 607

Query: 1783 SYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLL 1604
              +I  +RSD G EY S  F  +CE +GI+R +T PY PQQNGV+ER NRT+++ VR +L
Sbjct: 608  DKQIKAVRSDRGGEYTSTTFMEYCEEQGIRRFLTAPYTPQQNGVAERKNRTILDMVRSML 667

Query: 1603 HDANLDKTWWGEALLTTNYITNHWPNKALHMKSPIEMWYGVKPNISHFMEFGKTYYYLIP 1424
                + K +W EA+    Y+ N  P+  L  ++P E W G KP +SH   FG   Y  +P
Sbjct: 668  KSKKMPKEFWAEAVQCAIYVQNRCPHVKLDDQTPQEAWSGQKPTVSHLKVFGSVAYAHVP 727

Query: 1423 KEKWRKLDDKAKKGIFIGYPTGTKGYRLIDMETRNIIISREIKEADTESYEYDKT----- 1259
             ++  KL+DK+K+ +FIGY   TKGY+L+D  ++ + +SR+++  +   ++++ +     
Sbjct: 728  DQRRTKLEDKSKRYVFIGYDEKTKGYKLLDPISKKVTVSRDVQINEASEWDWNNSSEVMI 787

Query: 1258 -IQQNAPKNKNLLDKIETTIPKGFKK*PLWYRLMM*EAENFIKEKTIEANICFPIDLAIP 1082
             + +++P + N     ETT  +   + P    L      + + + T E ++   +  A  
Sbjct: 788  EVGESSPTSIN----SETTDDEDEPRQPKIRSL------HDLYDSTNEVHLVCLLADAEN 837

Query: 1081 KSPTEAIKKQHWKNAMDEEM 1022
             S  EA++ + W+ AMDEE+
Sbjct: 838  ISFEEAVRDKKWQTAMDEEI 857



 Score =  236 bits (601), Expect(2) = e-124
 Identities = 121/339 (35%), Positives = 198/339 (58%), Gaps = 7/339 (2%)
 Frame = -2

Query: 1011 KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 832
            + N W L ELPEG + +G +W++  K+   G +++YK+R+V +G+ QKEGIDY + F P 
Sbjct: 862  RNNTWELTELPEGSQPIGVKWIFKKKMNAQGEIERYKARLVAKGYKQKEGIDYDEVFAPV 921

Query: 831  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYE--DQNNLSCKILK 664
             +M+TI+ +IS A +  W +     KSAFLNG + EE+Y++ P  Y    +     K+ K
Sbjct: 922  VRMETIRLLISQAAQFKWPIFQMDVKSAFLNGVLEEEVYIEQPPGYMKIGEEKKVLKLKK 981

Query: 663  SLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLAFHVXXXXXXXXXX 484
            +LYGLK APRAW  +++ +    GF +   +  L+        + +A +V          
Sbjct: 982  ALYGLKQAPRAWNTRIDTYFKENGFKQCPYEHALYAKNNGGNMIFVALYVDDLIFMGNNN 1041

Query: 483  XXXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNGR 304
                +FK  +R EFE+TDLG ++ +LGL++ +   G  ++QE YA +++++Y + N N  
Sbjct: 1042 DMIEEFKGTMRREFEMTDLGLMKFFLGLEVRQKETGIFVSQEKYAKEILKKYKMENCNPV 1101

Query: 303  KYPLDSGAKLGE---DEAANIKDYQALIGSLIYLTNTRLDIQYPVSLLARAMHNPCKSHS 133
              P++ GAKL +    E  +   Y++L+GSL YLT TR D+   V +++R M  P  SH 
Sbjct: 1102 SIPMEPGAKLSKFDGGERVDASRYRSLVGSLRYLTCTRPDLSLSVGIISRFMEEPVYSHW 1161

Query: 132  KVVMGILQYIKGTLSLGLKFMKNDDLTIESYCDANFGKD 16
            K +  +L+YI+GT+SLGL + K +D  +  Y D+++  D
Sbjct: 1162 KALKRVLRYIQGTVSLGLFYSKAEDYKLVGYSDSDWCGD 1200


>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
          Length = 1265

 Score =  232 bits (592), Expect(2) = e-109
 Identities = 120/346 (34%), Positives = 207/346 (59%), Gaps = 9/346 (2%)
 Frame = -2

Query: 1011 KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 832
            K   W L ELPEG +++G +W+Y  K   NG +DKYK+R+V +G++Q+ G+DY + F P 
Sbjct: 807  KNGTWELTELPEGGKKIGVKWIYKTKFNENGEVDKYKARLVAKGYTQQHGVDYTEVFAPV 866

Query: 831  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYEDQNNLS--CKILK 664
            A+M+TI+ +++LA ++ W ++    KSAFL+G + EE++++ P  Y  + +     K+ K
Sbjct: 867  ARMETIRLVVALAAQRKWTIYQLDVKSAFLHGELNEEVFVEQPCGYVQKGHEQKVYKLKK 926

Query: 663  SLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLL-AFHVXXXXXXXXX 487
            +LYGLK AP AWY  +E +   +GF K   +  LF       +VL+ + +V         
Sbjct: 927  ALYGLKQAPXAWYSXIEAYFMKEGFEKCDYEHTLFIKTRKEGKVLIVSLYVDDLIFTGND 986

Query: 486  XXXXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNG 307
                 DFKR +++EF++TDLG +  +LGL++ + ++G  ++Q+ YA ++++ + +  SN 
Sbjct: 987  ELMFTDFKRSMKDEFDMTDLGKMRYFLGLEVLQRSDGIFISQKKYALEVLQRFGMDKSNS 1046

Query: 306  RKYPLDSGAKLGEDEAANIKD---YQALIGSLIYLTNTRLDIQYPVSLLARAMHNPCKSH 136
               P+  G KL +DE     D   Y+ ++GSL+YL  TR D+ + VSL++R M NP + H
Sbjct: 1047 VHNPIVPGFKLMKDEGGVKVDKTYYKQVVGSLMYLXATRPDMMFVVSLISRYMENPTELH 1106

Query: 135  SKVVMGILQYIKGTLSLGLKFMKNDDLTIESYCDANFGKD-EEGKS 1
             +    +L+Y++GT   G+ + K  D  + +Y +++   D +E KS
Sbjct: 1107 LQAAKRVLRYLQGTTEFGIFYRKGGDDELVTYTBSDHAGDLDERKS 1152



 Score =  192 bits (488), Expect(2) = e-109
 Identities = 123/402 (30%), Positives = 201/402 (50%), Gaps = 23/402 (5%)
 Frame = -1

Query: 2143 IEKFHKKLGHLNYKYLHISKQN--LDGSPNKISIPKQNCESCVIGKHHKLPFPT*G-FRA 1973
            +  +H + GHL++K L   +Q   ++G P ++  P + C+ C++GK  +  FP    +RA
Sbjct: 410  VHLWHCRYGHLSFKGLKTLQQKKMVNGLP-QLKSPLRLCKDCLVGKQQRYSFPWKSTWRA 468

Query: 1972 KKFLELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQ 1793
             + L L+H+DI G +   ++    Y ITF DD+SR  WVY L  K + F  F +F+  V+
Sbjct: 469  SQILXLVHADIXGPIKPISNSKKRYLITFTDDFSRKTWVYFLIEKSEAFVVFKRFKIHVE 528

Query: 1792 IEKSYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVR 1613
             E +  I  L +D G E+ S  F NFC+  GI+RQ+T  Y PQQN V ER NRT++  VR
Sbjct: 529  KETNSFIRALXTDRGGEFTSXEFTNFCDVNGIRRQLTAAYTPQQNXVXERKNRTIMNMVR 588

Query: 1612 CLLHDANLDKTWWGEALLTTNYITNHWPNKALHMKSPIEMWYGVKPNISHFMEFGKTYYY 1433
             ++ +  + K +W EA+  T ++ N  P  A+  K+P E W GVKP++ HF  FG   + 
Sbjct: 589  SMISEKKIPKPFWPEAVNWTVHVLNRSPTLAVQNKTPXEAWSGVKPSVEHFRVFGCISHV 648

Query: 1432 LIPKEKWRKLDDKAKKGIFIGYPTGT------KGYRLIDMETRNIIISREIKEADTESYE 1271
             +P  K  KLDDK+   + +G   G       K +       ++I+   E  + + E+  
Sbjct: 649  HVPDNKRTKLDDKSLSCVLLGVSEGDVVFEEHKNWDWDKTYEKSIVCDLEWGDLEEEATM 708

Query: 1270 YD--------------KTIQQNAPKNKNLLDKIETTIPKGFKK*PLWYRLMM*EAENFIK 1133
            +D              +  + N   +    D   ++  +  ++ P W R    +    + 
Sbjct: 709  FDENEEGTESDLEADIEAEEDNFSSDSLTEDSSPSSTAERIRRPPAWMRDY--DIGEGLS 766

Query: 1132 EKTIEANICFPIDLAIPKSPTEAIKKQHWKNAMDEEMTNMKK 1007
            E+  EA++      A P    +A+K + WK AMD E+  + K
Sbjct: 767  EEDNEAHLAM-FAAADPIHFEDAVKSEKWKKAMDLELAAINK 807


>ref|XP_003240529.1| PREDICTED: copia protein-like [Acyrthosiphon pisum]
          Length = 1279

 Score =  206 bits (524), Expect(2) = e-101
 Identities = 111/338 (32%), Positives = 198/338 (58%), Gaps = 9/338 (2%)
 Frame = -2

Query: 1011 KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 832
            K N W L  LP+G++ VG +W++ +K    GS+ KYK+R+V QGFSQKEG+DY DT+ P 
Sbjct: 799  KNNTWTLSHLPKGRKVVGTKWVFKIKRDSIGSVKKYKARLVAQGFSQKEGVDYYDTYSPV 858

Query: 831  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYEDQNNLSCKILKSL 658
            AK+ T+++++++A ++ W L     K+AFL G +TE+IY++ P+     +++  K+ KSL
Sbjct: 859  AKLTTLRTLLAIAVQRNWFLQQLDVKTAFLYGILTEDIYIEQPEGLNYNSDMIFKLNKSL 918

Query: 657  YGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTRE--VLLAFHVXXXXXXXXXX 484
            YGLK A + W+++ +++++  G  +S SD  L+ +  N     + L  +V          
Sbjct: 919  YGLKQASKCWHERFDNYIAKLGLEQSDSDQCLYILNNNNTHDIIYLLLYVDDIIIAGSNM 978

Query: 483  XXXXDFKRKLREEFEITDLGNVECYLGLQLH--KSNNGYVLNQEAYASKLIEEYNLTNSN 310
                + K  L+EEFE+ D G++  +LGL+++  K+     +NQ  Y   +++++N+ N N
Sbjct: 979  LKIGEIKSYLKEEFEMEDNGDLNYFLGLKINYDKTVGKLYINQTQYLEDVLKKFNMDNCN 1038

Query: 309  GRKYPLDSGAKLGEDEAANI-KDYQALIGSLIY-LTNTRLDIQYPVSLLARAMHNPCKSH 136
                P++S   + ED      + Y+ L+GSL+Y +  +R D+ Y ++   R    P + H
Sbjct: 1039 TISTPIESKLNIEEDNKQECNQPYRQLVGSLMYAMLGSRPDLSYALNFFCRYQSKPNECH 1098

Query: 135  SKVVMGILQYIKGTLSLGLKFMKNDDLT-IESYCDANF 25
               +  +L+Y+KGTL+ GL F +  + T +  + DA++
Sbjct: 1099 WNHLKRVLRYVKGTLNNGLCFHRQSNSTELIGFVDADW 1136



 Score =  192 bits (489), Expect(2) = e-101
 Identities = 137/440 (31%), Positives = 223/440 (50%), Gaps = 23/440 (5%)
 Frame = -1

Query: 2257 VFSPNNTKN*HVIISQNNYQIKVLTFE-----DIADYATNLVEIEKFHKKLGHLNYKYLH 2093
            V++  N KN  ++       +  LTF        A+Y+ +   I+ +H++LGHLN++ L 
Sbjct: 372  VYNKLNNKNNLIMKGSKVGNLYELTFNLNQNMPFANYSYSNT-IDLWHRRLGHLNFQTLE 430

Query: 2092 ISKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*GFRAKKFLELIHSDICGSMPYKTH 1913
                 +DG         + C  C+  K   LPF     RA + LELIHSD+CG +  +T 
Sbjct: 431  KLPDIVDGICINNEKYNEICGVCISSKQAALPFSGTRVRATRPLELIHSDVCGPIEPQTW 490

Query: 1912 IVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEKSYKIGCLRSDGGT-EYN 1736
                Y+++FIDD + +  +YLL  K +VF  F ++   V       I  +R D G  EY 
Sbjct: 491  DNKRYYVSFIDDNTHFTVIYLLSKKNEVFSAFKQYEANVTARFGQMISRIRCDNGRGEYY 550

Query: 1735 SIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLLHDANLDKTWWGEALLT 1556
            +  FK FC  KGI+ + TVPY PQQN V+ER NRT++E  R L+ D+ ++K +WGEA+ T
Sbjct: 551  NDNFKGFCVQKGIELEYTVPYTPQQNCVAERMNRTIMERARALIFDSGINKEFWGEAVYT 610

Query: 1555 TNYITNHWPNKALHMKSPIEMWYGVKPNISHFMEFGKTYYYLIPKEKWRKLDDKAKKGIF 1376
              Y+ N  P  AL  K+P E+WY  KP +S+   FG   +  IPK+  +K+    KK   
Sbjct: 611  AVYLINRCPTSALKDKTPAELWYKSKPTLSNIRLFGCKAFLQIPKQLRKKIG--FKKNCS 668

Query: 1375 IGYPTG------TKGYRLIDMET---RNIIISREIKEADTESYEYDKTIQQNAPKNKNLL 1223
            + Y  G         Y+    ET   R ++ +  I +++ ES + D+  ++     ++L 
Sbjct: 669  MYYVLGRNVIFDENTYQNKPPETIVNRIVLNNDNIDKSEEESTKQDELAEELHKFEEDLD 728

Query: 1222 DKIETTIPKGFKK-----*PLWYRLMM*EAENFIKEKTIEANICFPIDLAIPKSPTEAIK 1058
             ++++T+P   +       P  Y       ++F+    + + I    D  +PK+ + A+ 
Sbjct: 729  QEVKSTVPITTRSGRQVTKPAKY-------DDFVMSHLVLSAIDLIDD--VPKTYSSAVT 779

Query: 1057 KQH---WKNAMDEEMTNMKK 1007
              H   WKNA+ +E+ ++KK
Sbjct: 780  GVHANLWKNAIQDEIDSLKK 799


>gb|AAO73525.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  212 bits (540), Expect(2) = e-101
 Identities = 113/336 (33%), Positives = 192/336 (57%), Gaps = 7/336 (2%)
 Frame = -2

Query: 1011 KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 832
            +  VW L   PEG   +G +W++  K    G + + K+R+V QG++Q EG+D+ +TF P 
Sbjct: 1093 RNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPV 1152

Query: 831  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYEDQNNLS--CKILK 664
            A++++I+ ++ +A    ++L+    KSAFLNG + EE Y++ PK + D  +L    ++ K
Sbjct: 1153 ARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHLDHVYRLKK 1212

Query: 663  SLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLAFHVXXXXXXXXXX 484
            +LYGLK APRAWY++L +FL+ QG+ K   D  LF        ++   +V          
Sbjct: 1213 ALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSN 1272

Query: 483  XXXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNGR 304
                 F  +++ EFE++ +G +  +LGLQ+ +  +   L+Q  YA  +++++ + N++ +
Sbjct: 1273 EMLRHFVPQMQSEFEMSLVGELHYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASHK 1332

Query: 303  KYPLDSGAKLGEDEAANIKD---YQALIGSLIYLTNTRLDIQYPVSLLARAMHNPCKSHS 133
            + P  +  KL +DEA    D   Y+++IGSL+YLT +R DI + V + AR   NP  SH 
Sbjct: 1333 RTPAPTHLKLSKDEAGTSVDQNLYRSMIGSLLYLTASRPDITFAVGVCARYQANPKISHL 1392

Query: 132  KVVMGILQYIKGTLSLGLKFMKNDDLTIESYCDANF 25
              V  IL+Y+ GT   G+ +    D  +  YCDA++
Sbjct: 1393 NQVKRILKYVNGTSDYGIMYCHCSDSMLVGYCDADW 1428



 Score =  185 bits (469), Expect(2) = e-101
 Identities = 129/415 (31%), Positives = 196/415 (47%), Gaps = 35/415 (8%)
 Frame = -1

Query: 2146 EIEKFHKKLGHLNYKYLH--ISKQNLDGSPNKISIPKQNCESCVIGK-----HHKLPFPT 1988
            E++ +H++ GHL+ + +   I K  + G PN      + C  C IGK     H KL   T
Sbjct: 688  EVKIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKMSHQKLQHQT 747

Query: 1987 *GFRAKKFLELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKF 1808
                    LEL+H D+ G M  ++     Y    +DD+SR+ WV  ++ K D F+ F + 
Sbjct: 748  ----TSMVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSDTFEVFKEL 803

Query: 1807 RKLVQIEKSYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTL 1628
               +Q EK   I  +RSD G E+ +  F  FC ++GI  + +    PQQNG+ ER NRTL
Sbjct: 804  SLRLQREKDCVIKRIRSDHGREFENSKFTEFCTSEGITHEFSAAITPQQNGIVERKNRTL 863

Query: 1627 VEAVRCLLHDANLDKTWWGEALLTTNYITNHWPNKALHMKSPIEMWYGVKPNISHFMEFG 1448
             EA R +LH   L    W EA+ T  YI N    +     +  E+W G KP + HF  FG
Sbjct: 864  QEATRVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPTVKHFHIFG 923

Query: 1447 KTYYYLIPKEKWRKLDDKAKKGIFIGYPTGTKGYRLIDMETRNI-----IISREIKEADT 1283
               Y L  +E+ RK+D K+  GIF+GY T ++ YR+ +  TR +     ++  ++  A  
Sbjct: 924  SPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLTPARK 983

Query: 1282 ESYEYDKTIQQ-----------NAPKNKNLLDKIETTIPKGFKK*PLWYRLMM*EAENFI 1136
            +  E D    +           NA K+ +  D+     P    K P + R+   + +  I
Sbjct: 984  KDVEEDVRTSEDNVADTAKSAENAEKSDSTTDEPNINQPD---KSP-FIRIQKMQPKELI 1039

Query: 1135 ------------KEKTIEANICFPIDLAIPKSPTEAIKKQHWKNAMDEEMTNMKK 1007
                        +E  I +N CF +    PK+  EA+  + W NAM EE+   K+
Sbjct: 1040 IGDPNRGVTTRSREIEIVSNSCF-VSKIEPKNVKEALTDEFWINAMQEELEQFKR 1093


>emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera]
          Length = 1041

 Score =  220 bits (560), Expect(2) = e-100
 Identities = 144/405 (35%), Positives = 207/405 (51%), Gaps = 29/405 (7%)
 Frame = -1

Query: 2134 FHKKLGHLNYKYLH-ISKQNLDGSPNKISIPKQNCESCVIGKHHKLPFP-T*GFRAKKFL 1961
            +H + GHLN+  L  + ++N+     +I    Q CE CV+ K H   FP    +RAKK L
Sbjct: 240  WHFRYGHLNFGGLKTLQQKNMVTGLPQIIASSQFCEECVVSKQHCNQFPQVKSWRAKKAL 299

Query: 1960 ELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEKS 1781
            EL+HSDICG +   ++    Y ITFIDDYSR  WVY L+ K + F  F  ++ LV+ E  
Sbjct: 300  ELVHSDICGPIIPNSNGSKRYIITFIDDYSRKIWVYFLQEKSEAFVAFKSYKALVEKEVG 359

Query: 1780 YKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLLH 1601
              I   R D G EYNS  F NFCEN GI+RQ+T  Y PQQNGV ER N T++  VR LL 
Sbjct: 360  NPIKFFRMDRGGEYNSHEFANFCENHGIRRQLTATYIPQQNGVCERKNSTIMNMVRSLLT 419

Query: 1600 DANLDKTWWGEALLTTNYITNHWPNKALHMKSPIEMWYGVKPNISHFMEFGKTYYYLIPK 1421
             + + K++W EA+  + +I N  P   +   +P E W G K  ++HF  FG   Y  IP 
Sbjct: 420  TSGIPKSFWLEAVNWSIHILNRSPTLVVQNMTPKEAWSGRKLVVNHFRIFGCIAYAYIPD 479

Query: 1420 EKWRKLDDKAKKGIFIGYPTGTKGYRLIDMETRNIIISREI--KEADTESY--------- 1274
            EK RKLD+K +K IF+G     K Y+L +  T  I++SR++   E DT S+         
Sbjct: 480  EKRRKLDNKGEKCIFLGVSDKLKAYKLYNPSTMKIVLSRDVVFDEKDTWSWKQNGVKENI 539

Query: 1273 ----------------EYDKTIQQNAPKNKNLLDKIETTIPKGFKK*PLWYRLMM*EAEN 1142
                            E ++ + QN P         E+  P+  +K P W         +
Sbjct: 540  PVDFDDDEKWQQPMENEQEEEVTQNVPIVDQSPLATESQRPQRVRKRPAWMTNHEVTGVD 599

Query: 1141 FIKEKTIEANICFPIDLAIPKSPTEAIKKQHWKNAMDEEMTNMKK 1007
              ++      +    DL I ++   A+K+  W+ AMD E+  +++
Sbjct: 600  QGEDPLTYFAMFSDCDLIIFET---AVKEPKWRKAMDAEIAAIER 641



 Score =  176 bits (447), Expect(2) = e-100
 Identities = 97/310 (31%), Positives = 169/310 (54%), Gaps = 6/310 (1%)
 Frame = -2

Query: 1011 KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 832
            + + W L +LP+G++ +G +W+Y  KLK NG +DK+K+ +V +G+ Q+ G+DYK+ F   
Sbjct: 641  RNDTWELCDLPKGQKTIGVKWVYKTKLKENGEVDKHKACLVAKGYKQEFGVDYKEVFASI 700

Query: 831  AKMQTIQSIISLATKKGWELHHFKSAFLNGNITEEIYMK*PKCYEDQNN--LSCKILKSL 658
            A+  TI            +L   K AFL+G++ EE+++  P  Y    N     K+ K+L
Sbjct: 701  ARHDTI------------KLLDVKLAFLHGDLKEEVFIDQPLGYAKLGNEHKVYKLKKAL 748

Query: 657  YGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFY-IG*NTREVLLAFHVXXXXXXXXXXX 481
            YGLK  PRAWY ++E +   +GF K   +  LF  I    +  ++  +V           
Sbjct: 749  YGLKQTPRAWYNRIETYFLKEGFQKCPYEHTLFIKIEDGGKMHIVCLYVDDLIYTGNNTA 808

Query: 480  XXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNGRK 301
                FK+ +  EFE++DLG +  +LG+++ + + G +++Q+ Y  ++++ + + + N   
Sbjct: 809  MFESFKKSMMAEFEMSDLGMMHYFLGIEMMQYSTGILISQKKYVGEILDRFQMKDCNPVN 868

Query: 300  YPLDSGAKLGEDEAANIKD---YQALIGSLIYLTNTRLDIQYPVSLLARAMHNPCKSHSK 130
             P + G KL +D      D   Y+ ++GSL+YLT T  DI + VS+++R M  P + H  
Sbjct: 869  TPSEFGMKLNKDNGGKKVDDTLYKQIVGSLMYLTITIPDIMHVVSVISRYMEYPTEIHLL 928

Query: 129  VVMGILQYIK 100
                I +Y+K
Sbjct: 929  AAKRIFRYLK 938


>gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana]
          Length = 1392

 Score =  199 bits (506), Expect(2) = 1e-96
 Identities = 110/332 (33%), Positives = 176/332 (53%), Gaps = 5/332 (1%)
 Frame = -2

Query: 1005 NVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPTAK 826
            + W L       R +GC+W++  KL  +GSLD+ K+R+V +G+ Q+EG+DY +T+ P  +
Sbjct: 824  DTWDLVPPEMVDRLLGCKWVFKTKLNSDGSLDRLKARLVARGYEQEEGVDYVETYSPVVR 883

Query: 825  MQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYEDQN--NLSCKILKSL 658
              T++SI+ +AT   W L     K+AFL+  + E ++M  P  +ED +  +  CK+ K++
Sbjct: 884  SATVRSILHVATINKWSLKQLDVKNAFLHDELKETVFMTQPPGFEDPSRPDYVCKLKKAI 943

Query: 657  YGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLAFHVXXXXXXXXXXXX 478
            Y LK APRAW+ K   +L   GF  S SDP+LF        + L  +V            
Sbjct: 944  YDLKQAPRAWFDKFSSYLLKYGFICSFSDPSLFVYLKGRDVMFLLLYVDDMILTGNNDVL 1003

Query: 477  XXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNGRKY 298
                   L  EF + D+G +  +LG+Q H  N+G  L+QE Y S L+    +++ +    
Sbjct: 1004 LQQLLNILSTEFRMKDMGALHYFLGIQAHYHNDGLFLSQEKYTSDLLVNAGMSDCSSMPT 1063

Query: 297  PLDSGAKLGEDEAANIKDY-QALIGSLIYLTNTRLDIQYPVSLLARAMHNPCKSHSKVVM 121
            PL      G ++      Y + L G L YLT TR DIQ+ V+ + + MH P  S   ++ 
Sbjct: 1064 PLQLDLLQGNNKPFPEPTYFRRLAGKLQYLTLTRPDIQFAVNFVCQKMHAPTMSDFHLLK 1123

Query: 120  GILQYIKGTLSLGLKFMKNDDLTIESYCDANF 25
             IL Y+KGT+++G+    N D  +  Y D+++
Sbjct: 1124 RILHYLKGTMTMGINLSSNTDSVLRCYSDSDW 1155



 Score =  184 bits (466), Expect(2) = 1e-96
 Identities = 129/399 (32%), Positives = 190/399 (47%), Gaps = 2/399 (0%)
 Frame = -1

Query: 2203 YQIKVLTFEDIADYATNLVEIEKFHKKLGHLNYKYLHISKQNLDGSPNKISIPKQNCESC 2024
            Y +K + F+          + E +H++LGH N + L    +      NK S     CE+C
Sbjct: 438  YVLKDVPFQTYYSTRQQSSDDEVWHQRLGHPNKEVLQHLIKTKAIVVNKTS--SNMCEAC 495

Query: 2023 VIGKHHKLPFPT*GFRAKKFLELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLK 1844
             +GK  +LPF    F + + LE IH D+ G  P  +   + Y++ FID+YSR+ W Y LK
Sbjct: 496  QMGKVCRLPFVASEFVSSRPLERIHCDLWGPAPVTSAQGFQYYVIFIDNYSRFTWFYPLK 555

Query: 1843 IKKDVFQTFIKFRKLVQIEKSYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQ 1664
            +K D F  F+ F++LV+ +  +KI   + DGG E+ S  F     + GIK+ ++ P+ PQ
Sbjct: 556  LKSDFFSVFVLFQQLVENQYQHKIAMFQCDGGGEFVSYKFVAHLASCGIKQLISCPHTPQ 615

Query: 1663 QNGVSER*NRTLVEAVRCLLHDANLDKTWWGEALLTTNYITNHWPNKAL-HMKSPIEMWY 1487
            QNG++ER +R L E    L+  + +    W EA  T+N+++N  P+  L   KSP EM +
Sbjct: 616  QNGIAERRHRYLTELGLSLMFHSKVPHKLWVEAFFTSNFLSNLLPSSTLSDNKSPYEMLH 675

Query: 1486 GVKPNISHFMEFGKTYY-YLIPKEKWRKLDDKAKKGIFIGYPTGTKGYRLIDMETRNIII 1310
            G  P  +    FG   Y YL P  K  K D K+   +F+GY    KGYR +   T  + I
Sbjct: 676  GTPPVYTALRVFGSACYPYLRPYAK-NKFDPKSLLCVFLGYNNKYKGYRCLHPPTGKVYI 734

Query: 1309 SREIKEADTESYEYDKTIQQNAPKNKNLLDKIETTIPKGFKK*PLWYRLMM*EAENFIKE 1130
             R +   D   + Y     Q    + +    + T   KGF    L             K 
Sbjct: 735  CRHVL-FDERKFPYSDIYSQFQTISGS---PLFTAWQKGFSSTAL---------SRITKP 781

Query: 1129 KTIEANICFPIDLAIPKSPTEAIKKQHWKNAMDEEMTNM 1013
                A      +   PKS  EA+K + W NAM EEM  M
Sbjct: 782  NPKYALFSVKSNYPEPKSVKEALKDEGWTNAMGEEMGTM 820


>emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group]
          Length = 1015

 Score =  231 bits (589), Expect(2) = 1e-95
 Identities = 122/335 (36%), Positives = 187/335 (55%), Gaps = 6/335 (1%)
 Frame = -2

Query: 1011 KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 832
            K   W L   P GK+ V C+W+  VK  P G +++YK+R+V +G+SQ  GIDY +TF P 
Sbjct: 513  KNKTWELVPFPTGKKVVSCKWVNAVKQDPFGKVERYKARLVAKGYSQTYGIDYDETFAPV 572

Query: 831  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYEDQNNLS--CKILK 664
            AKM T++++IS A    W L+    K+AFL+G++ EE+YM+ P  +          ++ K
Sbjct: 573  AKMSTVRTLISCAANFDWPLYQLDVKNAFLHGDLQEEVYMEIPPGFSTSQTKGKVLRLKK 632

Query: 663  SLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLAFHVXXXXXXXXXX 484
            SLYGLK +PRAW+ +    +   G+ +   D  LFY     +  +LA +V          
Sbjct: 633  SLYGLKQSPRAWFDRFRRAMCGMGYKQCNGDHTLFYRHRGKKIAILAVYVDDIIITGDDT 692

Query: 483  XXXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNGR 304
                  K  + +EFE+ DLG ++ +LG+++ +S  G VL+Q  Y   L+ +  +      
Sbjct: 693  QEIAQLKENISKEFEVKDLGQLKYFLGIEIARSPRGIVLSQRKYVLDLLCDTGMLGCRPA 752

Query: 303  KYPLDSGAKLGED--EAANIKDYQALIGSLIYLTNTRLDIQYPVSLLARAMHNPCKSHSK 130
              P++   KL  +  +  N + YQ L+G LIYL +TR DI Y VS+++R MH+P   H  
Sbjct: 753  STPIEQNHKLCAELGDPVNKERYQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMD 812

Query: 129  VVMGILQYIKGTLSLGLKFMKNDDLTIESYCDANF 25
             V  IL+Y+KG+   GL F KN  L +E YCDA++
Sbjct: 813  AVYRILRYLKGSPGKGLWFKKNGHLGVEGYCDADW 847



 Score =  149 bits (375), Expect(2) = 1e-95
 Identities = 112/404 (27%), Positives = 192/404 (47%), Gaps = 29/404 (7%)
 Frame = -1

Query: 2131 HKKLGHLNYKYLHISKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*GFRAKKFLELI 1952
            H +LGH+ ++ +   ++      +K+   K  C++C  GKH +  + + G R+     LI
Sbjct: 127  HCRLGHMCFETM---RKIYPDEMSKVDRSKLVCDACEYGKHTRATYISRGLRSISPFMLI 183

Query: 1951 HSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEKSYKI 1772
            HSD+  S P  +     YF+TFID YSR  W+YL+K K +V + F  F   V+ + +  +
Sbjct: 184  HSDVWTS-PIVSVSGMKYFVTFIDCYSRMTWIYLMKHKNEVLKCFKDFYAFVRNQFNTCV 242

Query: 1771 GCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLLHDAN 1592
              +R+D G EY +  F +F   +GI  Q + P  P QNGV+E+ NR ++E  R L++  N
Sbjct: 243  KIIRTDNGKEYVNNEFGSFLSIEGILHQTSCPDTPPQNGVAEKKNRHILEVARSLMYTMN 302

Query: 1591 LDKTWWGEALLTTNYITNHWPNKALHMKSPIEMWYGVKPNISHFMEFGKTYYYLIPKEKW 1412
            + K  W EA++T  Y+ N  P++ L MK+P EM +G                +++P + W
Sbjct: 303  VPKFLWSEAVMTATYLINRTPSRILGMKAPYEMVFGCNE-------------FIVPPKNW 349

Query: 1411 RKLDDKAKKGIFIGYPTGTKGYRLIDME----TRNIIISRE-----IKEADTESYEYDKT 1259
            RK  ++    ++      +   + ++ +     RN ++ +      I E + +S      
Sbjct: 350  RKPHEEENLQVYTRRKPRSLETQQVEQQPLTIDRNEMVEQHQQPLVIDEINDQSSYQSDP 409

Query: 1258 IQQNAPK--NKNLLDKIETTIP----KGFK----K*PLWYRLMM*EAE------NFIKEK 1127
            IQ+N      ++ +   E+ +P    KG +    K P+ Y     E E      N++   
Sbjct: 410  IQENTETGGEESEISGEESNLPIANRKGIRSTAGKPPIRYGFEEVEEENGNDIANYVSYS 469

Query: 1126 TI----EANICFPIDLAIPKSPTEAIKKQHWKNAMDEEMTNMKK 1007
            ++     A I     + IPK   EA     W  AM EEM+ ++K
Sbjct: 470  SLSPAYRAFIASFQSIVIPKDWREAKNDPKWHEAMMEEMSALEK 513


>gb|AAR96231.1| putative integrase [Oryza sativa Japonica Group]
            gi|108708487|gb|ABF96282.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1094

 Score =  233 bits (593), Expect(2) = 4e-95
 Identities = 129/381 (33%), Positives = 205/381 (53%), Gaps = 5/381 (1%)
 Frame = -1

Query: 2134 FHKKLGHLNYKYLH-ISKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*G-FRAKKFL 1961
            +H + GHLN+  L  +S + +     ++   +Q C+ C+IGK  + PFP    FRA   L
Sbjct: 347  WHARFGHLNFDALRMLSTRGMARGLPELEHVRQVCDECLIGKQRRAPFPVMAMFRATSRL 406

Query: 1960 ELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEKS 1781
            +L+H DICG +   TH    YF+  I D SRY W++ L  K +   T  +F+  V++E  
Sbjct: 407  DLVHGDICGPISSSTHGGKKYFLLLIGDMSRYMWLFPLTCKSEASATIKRFKAGVEMETG 466

Query: 1780 YKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLLH 1601
             K+  LR+D G E+ SI F  +C N+G+ RQ+T PY+PQQNGV ER N+T++   RC++ 
Sbjct: 467  CKLRVLRTDRGGEFTSIEFSLYCANEGVTRQLTAPYSPQQNGVVERHNQTVMAMARCMMK 526

Query: 1600 DANLDKTWWGEALLTTNYITNHWPNKALHMKSPIEMWYGVKPNISHFMEFGKTYYYLIPK 1421
               +   +WGEA+ T  +I N  P KA+  K+P E W+G  P++ +F  FG   +    K
Sbjct: 527  AKQMPGKFWGEAVTTAVFILNRSPTKAVPDKTPYEAWHGRTPDMHYFRTFGCVVHVKEVK 586

Query: 1420 EKWRKLDDKAKKGIFIGYPTGTKGYRLIDMETRNIIISREIKEADTESYEYDKTIQQNAP 1241
               +KLDD+ K  +F+GY  GTKGYR+ D E   + ++R+    +  S+ + + ++Q   
Sbjct: 587  PHLKKLDDRNKVMVFLGYEPGTKGYRVFDPEANRVAVTRDAVFDEAASWPWGEPVEQG-- 644

Query: 1240 KNKNLLDKIETTIPKGFKK*PLWYRLMM*EAENFIKEKTIEANICFPIDLAIPKSP---T 1070
                     E +    F   P  YR M     N +    +       + LA+ K P   T
Sbjct: 645  ---------EASSDDSFTGAPRRYRSM----ANILDTTALVELDSDELYLAVAKEPANLT 691

Query: 1069 EAIKKQHWKNAMDEEMTNMKK 1007
            EA + +HW+ AM +E+ ++++
Sbjct: 692  EAEQDEHWRQAMQDEIKSIEE 712



 Score =  145 bits (366), Expect(2) = 4e-95
 Identities = 87/316 (27%), Positives = 158/316 (50%), Gaps = 5/316 (1%)
 Frame = -2

Query: 1011 KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 832
            + + W L ELP GK  +  +W++ +     G++  +++R++ +G+ Q  GI++ + F P 
Sbjct: 712  ENSTWILTELPAGKCPIDLKWVFKLNKNETGAVIWHEARLMAKGYVQCHGINFDEVFAPV 771

Query: 831  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYEDQNNLSCKILKSL 658
            A+M++++ ++++A    W +HH   KSAFLN  + EE                       
Sbjct: 772  AQMESMRLLLAVAAHLEWTVHHMDVKSAFLNRELEEE----------------------- 808

Query: 657  YGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLAFHVXXXXXXXXXXXX 478
                        KL+  L   GF +S ++  ++  G  T+ +++  +V            
Sbjct: 809  ----------NAKLDTCLHELGFKRSTTEHAVYTRGEGTKRLIVGVYVDDLIITGAHAEE 858

Query: 477  XXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNGRKY 298
               FK ++   F I+DLG +  YLG+++H+S++   +NQ AYA KL++   L + N    
Sbjct: 859  IRHFKGEMHSLFCISDLGLLSYYLGIEVHQSDDDITINQSAYAQKLLKIGGLADCNSTCI 918

Query: 297  PLDSGAKLGEDE---AANIKDYQALIGSLIYLTNTRLDIQYPVSLLARAMHNPCKSHSKV 127
            P++   KL ++    A +   Y++L+GSL YL + R +I + VS ++R M  P  +H   
Sbjct: 919  PMEPRLKLTKNSDRMAVDSTLYRSLVGSLRYLVHARPNIAFAVSYVSRFMETPHDNHMAA 978

Query: 126  VMGILQYIKGTLSLGL 79
            V  ILQY+ G   LG+
Sbjct: 979  VKHILQYVAGAACLGM 994


>gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1303

 Score =  195 bits (496), Expect(2) = 2e-93
 Identities = 107/341 (31%), Positives = 186/341 (54%), Gaps = 5/341 (1%)
 Frame = -2

Query: 1011 KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 832
            K + W L  LP G + +G +W++ +K    G + K+K+ +V +G+ Q+ G+D+++ F P 
Sbjct: 836  KNSTWSLCTLPVGHKAIGLKWVFELKKNTTGEVIKHKAWLVAKGYVQRHGVDFEEVFAPV 895

Query: 831  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCY--EDQNNLSCKILK 664
            A++ T+++I+++A  +GW +HH   KSAFLNG + EE+Y+   + +  + Q +L  K+ K
Sbjct: 896  ARLDTVRTILAVAADRGWRVHHLDVKSAFLNGELEEEVYVAQLEGFIKKGQEHLVLKLSK 955

Query: 663  SLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLAFHVXXXXXXXXXX 484
            +LYGL+ APRAW   L+  L   GF +   +  ++  G     +++  +V          
Sbjct: 956  ALYGLRQAPRAWNICLDKSLKELGFMRCKQEQAVYTRGRGAEAMIVGVYVDDLIVTGENP 1015

Query: 483  XXXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNGR 304
                 FK+++  EFE+ DLG +  YLG+++ +  NG  L Q AYA K          +  
Sbjct: 1016 ARVEAFKKQMMGEFEMNDLGLLSYYLGIEVGQGVNGITLKQTAYAKK-----TQLQKDAD 1070

Query: 303  KYPLDSGAKLGEDEAANIKDYQALIGSLIYLTNTRLDIQYPVSLLARAMHNPCKSHSKVV 124
             +P+D+             +Y+ +IG L YL +TR D+ Y V + +R M +P  +H K V
Sbjct: 1071 GHPVDA------------IEYRRVIGCLRYLLHTRPDLSYAVGVASRFMEHPTMTHLKAV 1118

Query: 123  MGILQYIKGTLSLGLKFMKN-DDLTIESYCDANFGKDEEGK 4
              IL+Y+KGT+  GL +     ++TI  Y D++   D + +
Sbjct: 1119 KQILRYLKGTIDCGLVYTAGIGEITITGYTDSDLAGDVDDR 1159



 Score =  177 bits (449), Expect(2) = 2e-93
 Identities = 110/357 (30%), Positives = 179/357 (50%), Gaps = 20/357 (5%)
 Frame = -1

Query: 2134 FHKKLGHLNYKYLH--ISKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*G-FRAKKF 1964
            +H +LGH+N++ L   + K+   G P ++  P Q C++C++ K  + PFP    +RA+  
Sbjct: 488  WHARLGHVNFQTLKLLVDKEMAAGVP-QVHHPNQLCQACLMAKQIRQPFPAMANYRAEAP 546

Query: 1963 LELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEK 1784
            LEL+H D+CG +   T  V  YF+  +DD+SR+ WV+++K K    + F KF+ L +   
Sbjct: 547  LELLHMDLCGPITPSTFAVNRYFLLIVDDFSRWMWVFVIKTKDQALEMFAKFKPLAENTA 606

Query: 1783 SYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLL 1604
             + I  LR+D   E+ S  F   C+  GI+R +T PY+PQQNGV E  NR+++   R LL
Sbjct: 607  DHSIKTLRTDHSGEFLSGEFARVCDEAGIERHLTAPYSPQQNGVVEHRNRSVMAMARSLL 666

Query: 1603 HDANLDKTWWGEALLTTNYITNHWPNKALHMKSPIEMWYGVKPNISHFMEFGKTYYYLIP 1424
               ++    WGEA+    ++ N  P K++   +P E W G KP++ H   FG T +  + 
Sbjct: 667  KGMSVPGRMWGEAVRHAVFLLNRLPTKSMGEHTPFEAWTGKKPHLGHLQVFGCTAHTKVT 726

Query: 1423 KEKWRKLDDKAKKG---IFIGYPTGTKGYRLIDMETRNIIISREIKEADTES----YEYD 1265
                +KLDD+ ++      +  P G +   L +  T    +   +  A ++     Y   
Sbjct: 727  TPNLKKLDDRREENSTEFVVEEPVGEQQPALAEQST---TVEASLSTAGSDDGPLRYRSL 783

Query: 1264 KTIQQNAPKNKNLLDK-------IETTIPKGFKK---*PLWYRLMM*EAENFIKEKT 1124
              I   AP+  +L+D+        ET  P  +++    P W   M  E E   K  T
Sbjct: 784  ADIMLEAPR-VDLVDEEDGEALLAETEEPSSYREAAGEPAWVDAMQKELEAIEKNST 839


>ref|XP_003375245.1| putative integrase core domain protein [Trichinella spiralis]
            gi|316971451|gb|EFV55218.1| putative integrase core
            domain protein [Trichinella spiralis]
          Length = 1249

 Score =  192 bits (488), Expect(2) = 2e-93
 Identities = 109/338 (32%), Positives = 189/338 (55%), Gaps = 6/338 (1%)
 Frame = -2

Query: 1011 KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 832
            + +VW L + P GK+ +  RW+  +K K +GS+ +YK+R+V +G+ Q+ GIDY +TF P 
Sbjct: 767  ENSVWTLVDPPSGKKVLDSRWVLRIKTKADGSVARYKARLVAKGYMQRPGIDYDETFSPV 826

Query: 831  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYEDQNNLSCKILKSL 658
            A+  T+++++S+A  +  +L  F  K+AFL G + EE+Y+K P+ +E+  N   K+ +SL
Sbjct: 827  ARFDTVRALLSIAAVERLKLQQFDVKTAFLYGALKEEVYVKQPEGFENGTNQVYKLNRSL 886

Query: 657  YGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLAFHVXXXXXXXXXXXX 478
            YGLK APR W  +L +FL  QG  +S +DP LF       ++L+A +V            
Sbjct: 887  YGLKQAPRCWNLRLVEFLRKQGLKQSTADPCLFARMKERSKLLVAIYVDDGIVAGSDTDE 946

Query: 477  XXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVL-NQEAYASKLIEEYNLTNSNGRK 301
               F   +++EF+I   G ++ +LG+ +   ++G +   Q+AY   +++ + L  +N   
Sbjct: 947  MEQFLAVMKKEFQIKQ-GPLDTFLGMGIKVLSDGSIFAGQQAYIRHILKRFRLDEANAVS 1005

Query: 300  YPLDSGAKLGEDEAANIKD--YQALIGSLIYL-TNTRLDIQYPVSLLARAMHNPCKSHSK 130
             P +    + E E     D  Y+  +G+L++L T TR DI Y VS +++ M  P     +
Sbjct: 1006 TPAEINVSMEEREEHLSSDIPYREAVGALMFLMTATRPDIAYAVSTVSQVMDKPTIKAWQ 1065

Query: 129  VVMGILQYIKGTLSLGLKFMKNDDLTIESYCDANFGKD 16
             V  I +Y++GT   GL +    +  ++ Y DA++  D
Sbjct: 1066 AVKRIFRYLRGTADYGLLYQAKGEGFLKGYSDADYAGD 1103



 Score =  180 bits (456), Expect(2) = 2e-93
 Identities = 120/410 (29%), Positives = 205/410 (50%), Gaps = 20/410 (4%)
 Frame = -1

Query: 2161 ATNLVEIEKFHKKLGHLNYKYLHISKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*G 1982
            +T    ++ +H++L H N +++   +Q L+    K+   +Q C  CV+GKHH+  F +  
Sbjct: 369  STANASLQLWHERLCHQNKRHV---QQVLNNHGIKVHAQEQFCTGCVLGKHHRESFQSRK 425

Query: 1981 FRAKKFLELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRK 1802
            +R +   +LIH D+CG M   +     YF+ F DD+SRY  V+ LK K DV Q    F  
Sbjct: 426  YRPRAPGKLIHVDLCGPMHVTSLGGSKYFLVFKDDFSRYRRVFFLKRKDDVAQCLETFLN 485

Query: 1801 LVQIEKSYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVE 1622
              +   +  + C+ SDGG E+N+   K+  + +G+  +  +PY P+QNGV+ER NR LVE
Sbjct: 486  ESRTAGN-TVECILSDGGLEFNNAHVKDILQRRGVAMRTAMPYTPEQNGVAERENRILVE 544

Query: 1621 AVRCLLHDANLDKTWWGEALLTTNYITNHWPNKALHMKSPIEMWYGVKP-NISHFMEFGK 1445
              R +LH  +L    W EA+ T  Y+ N      +  KSPIE+W+   P +I HF  FG 
Sbjct: 545  TGRSMLHSKDLPLYLWAEAVNTACYVLNRTGPTTVKGKSPIELWFKRDPVSIDHFHVFGT 604

Query: 1444 TYYYLIPKEKWRKLDDKAKKGIFIGYPTGTKGYRLIDMETRNIIISREI----------K 1295
              +  +PK++ RK + K+  G F+GY     GYR+   +   I+ SR+I           
Sbjct: 605  ECFVHVPKQRRRKWEKKSVAGRFMGYCDEKDGYRIWLPDINQIVTSRDILFKPEEIRLSS 664

Query: 1294 EADTESYEYDKTIQQNAPKNKNLLDKIETTIPKGFKK*PLWYRLMM*EAENFIKEKTIE- 1118
            +   ++   +K  +++ P  + L  ++E       K+        M + E+ +  K +  
Sbjct: 665  KMSVKADSSEKNEEEDDPDAEEL--RLELNSQWTSKEAECEVETKMEQEEDALSSKRVRK 722

Query: 1117 -----ANICFPIDLAIPKSPTEAIKK---QHWKNAMDEEMTNMKKKCLET 992
                 ++    +    P S  EA++      W+ AM+EE+ ++++  + T
Sbjct: 723  MPNYLSDYVLTVQTPPPSSFHEAMQSVDAADWRKAMEEELHSLEENSVWT 772


>ref|XP_003370196.1| putative integrase core domain protein [Trichinella spiralis]
            gi|316964977|gb|EFV49847.1| putative integrase core
            domain protein [Trichinella spiralis]
          Length = 1249

 Score =  192 bits (488), Expect(2) = 2e-93
 Identities = 109/338 (32%), Positives = 189/338 (55%), Gaps = 6/338 (1%)
 Frame = -2

Query: 1011 KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 832
            + +VW L + P GK+ +  RW+  +K K +GS+ +YK+R+V +G+ Q+ GIDY +TF P 
Sbjct: 767  ENSVWTLVDPPSGKKVLDSRWVLRIKTKADGSVARYKARLVAKGYMQRPGIDYDETFSPV 826

Query: 831  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYEDQNNLSCKILKSL 658
            A+  T+++++S+A  +  +L  F  K+AFL G + EE+Y+K P+ +E+  N   K+ +SL
Sbjct: 827  ARFDTVRALLSIAAVERLKLQQFDVKTAFLYGALKEEVYVKQPEGFENGTNQVYKLNRSL 886

Query: 657  YGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLAFHVXXXXXXXXXXXX 478
            YGLK APR W  +L +FL  QG  +S +DP LF       ++L+A +V            
Sbjct: 887  YGLKQAPRCWNLRLVEFLRKQGLKQSTADPCLFARMKERSKLLVAIYVDDGIVAGSDTDE 946

Query: 477  XXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVL-NQEAYASKLIEEYNLTNSNGRK 301
               F   +++EF+I   G ++ +LG+ +   ++G +   Q+AY   +++ + L  +N   
Sbjct: 947  MEQFLAVMKKEFQIKQ-GPLDTFLGMGIKVLSDGSIFAGQQAYIRHILKRFRLDEANAVS 1005

Query: 300  YPLDSGAKLGEDEAANIKD--YQALIGSLIYL-TNTRLDIQYPVSLLARAMHNPCKSHSK 130
             P +    + E E     D  Y+  +G+L++L T TR DI Y VS +++ M  P     +
Sbjct: 1006 TPAEINVSMEEREEHLSSDIPYREAVGALMFLMTATRPDIAYAVSTVSQVMDKPTIKAWQ 1065

Query: 129  VVMGILQYIKGTLSLGLKFMKNDDLTIESYCDANFGKD 16
             V  I +Y++GT   GL +    +  ++ Y DA++  D
Sbjct: 1066 AVKRIFRYLRGTADYGLLYQAKGEGFLKGYSDADYAGD 1103



 Score =  180 bits (456), Expect(2) = 2e-93
 Identities = 120/410 (29%), Positives = 205/410 (50%), Gaps = 20/410 (4%)
 Frame = -1

Query: 2161 ATNLVEIEKFHKKLGHLNYKYLHISKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*G 1982
            +T    ++ +H++L H N +++   +Q L+    K+   +Q C  CV+GKHH+  F +  
Sbjct: 369  STANASLQLWHERLCHQNKRHV---QQVLNNHGIKVHAQEQFCTGCVLGKHHRESFQSRK 425

Query: 1981 FRAKKFLELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRK 1802
            +R +   +LIH D+CG M   +     YF+ F DD+SRY  V+ LK K DV Q    F  
Sbjct: 426  YRPRAPGKLIHVDLCGPMHVTSLGGSKYFLVFKDDFSRYRRVFFLKRKDDVAQCLETFLN 485

Query: 1801 LVQIEKSYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVE 1622
              +   +  + C+ SDGG E+N+   K+  + +G+  +  +PY P+QNGV+ER NR LVE
Sbjct: 486  ESRTAGN-TVECILSDGGLEFNNAHVKDILQRRGVAMRTAMPYTPEQNGVAERENRILVE 544

Query: 1621 AVRCLLHDANLDKTWWGEALLTTNYITNHWPNKALHMKSPIEMWYGVKP-NISHFMEFGK 1445
              R +LH  +L    W EA+ T  Y+ N      +  KSPIE+W+   P +I HF  FG 
Sbjct: 545  TGRSMLHSKDLPLYLWAEAVNTACYVLNRTGPTTVKGKSPIELWFKRDPVSIDHFHVFGT 604

Query: 1444 TYYYLIPKEKWRKLDDKAKKGIFIGYPTGTKGYRLIDMETRNIIISREI----------K 1295
              +  +PK++ RK + K+  G F+GY     GYR+   +   I+ SR+I           
Sbjct: 605  ECFVHVPKQRRRKWEKKSVAGRFMGYCDEKDGYRIWLPDINQIVTSRDILFKPEEILLSS 664

Query: 1294 EADTESYEYDKTIQQNAPKNKNLLDKIETTIPKGFKK*PLWYRLMM*EAENFIKEKTIE- 1118
            +   ++   +K  +++ P  + L  ++E       K+        M + E+ +  K +  
Sbjct: 665  KMSVKADSSEKNEEEDDPDAEEL--RLELNSQWTSKEAECEVETKMEQEEDALSSKRVRK 722

Query: 1117 -----ANICFPIDLAIPKSPTEAIKK---QHWKNAMDEEMTNMKKKCLET 992
                 ++    +    P S  EA++      W+ AM+EE+ ++++  + T
Sbjct: 723  MPNYLSDYVLTVQTPPPSSFHEAMQSVDAADWRKAMEEELHSLEENSVWT 772


>emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]
          Length = 1885

 Score =  188 bits (478), Expect(2) = 1e-92
 Identities = 126/397 (31%), Positives = 197/397 (49%), Gaps = 21/397 (5%)
 Frame = -1

Query: 2134 FHKKLGHLNYKYL-HISKQNLDGSPNKISIPKQN-CESCVIGKHHKLPFPT*GF-RAKKF 1964
            +H++LGH N   +  ++K  L     KI+  K   CE+C +GK  K  F    F    + 
Sbjct: 604  WHRRLGHANMDLISQLNKDELVRGLPKINFQKDKICEACQMGKQIKNSFKNKNFISTSRP 663

Query: 1963 LELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEK 1784
            LEL+H D+ G     +     Y    +DD+SRY WV  L  K + F  F KF   VQ EK
Sbjct: 664  LELLHMDLFGPSRTPSLGGKSYAYVIVDDFSRYTWVLFLSQKSEAFYEFSKFCNKVQNEK 723

Query: 1783 SYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLL 1604
             + I C+RSD G E+ +  F+ +C   GI      P   QQNGV ER NRTL E  R +L
Sbjct: 724  GFSITCIRSDHGREFENFDFEEYCNKYGINHNFLAPRTSQQNGVVERKNRTLQEMARTML 783

Query: 1603 HDANLDKTWWGEALLTTNYITNHWPNKALHMKSPIEMWYGVKPNISHFMEFGKTYYYLIP 1424
            ++ NL K +W EA+ T+ Y+ N    + +  K+P E+W   KPNIS+F  FG   + L  
Sbjct: 784  NENNLPKYFWAEAINTSCYVLNRILLRPILKKTPYELWKNKKPNISYFKVFGCKCFILNT 843

Query: 1423 KEKWRKLDDKAKKGIFIGYPTGTKGYRLIDMETRNIIISREIKEADTESYEYDKTIQQNA 1244
            K+   K D K+  GIF+GY T +K +R+ +   R +++   I       +++    +   
Sbjct: 844  KDNLGKFDAKSDVGIFLGYSTSSKAFRVFN--KRTMVVEESI-------HDWRLPWENCK 894

Query: 1243 PKNKNLLDKIETTIPKGFKK*PLWYRLMM*EAE---------------NFIKEKTIEANI 1109
             + K+   K+E  IP+  KK  LW+ L++ + +               + ++ ++   NI
Sbjct: 895  LRTKDNKKKVE-RIPR--KKNHLWHYLLLNKCKFVINHPQDQIIGNPLSGVRTRSSLRNI 951

Query: 1108 CFP---IDLAIPKSPTEAIKKQHWKNAMDEEMTNMKK 1007
            C     I    PK+  +AI  ++W  AM +E+   ++
Sbjct: 952  CNNLAFISQIEPKNIKDAIVDENWMIAMQKELNQFER 988



 Score =  181 bits (460), Expect(2) = 1e-92
 Identities = 112/336 (33%), Positives = 172/336 (51%), Gaps = 7/336 (2%)
 Frame = -2

Query: 1011 KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 832
            +  VW L   P  +  +G +W++  K+  NG + + K+R+V QG++Q+EGIDY++TF P 
Sbjct: 988  RSEVWELVPRPSNQSVIGTKWVFRNKMDENGIIVRNKARLVAQGYNQEEGIDYEETFAPV 1047

Query: 831  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYEDQN--NLSCKILK 664
            A+++ I+ +++ A  K + L+    KSAFLNG I EEIY++ P  ++  N  N   K+ K
Sbjct: 1048 ARLEAIRMLLAFACFKDFILYQMDVKSAFLNGFINEEIYVEQPPGFQSFNFPNHVFKLKK 1107

Query: 663  SLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLAFHVXXXXXXXXXX 484
            +LYGLK APRAWY++L  FL  + F     D  LF        +L+  +V          
Sbjct: 1108 ALYGLKQAPRAWYERLSKFLLKKSFKMGKIDTTLFIKTKENDMLLVQIYVDDITFGATND 1167

Query: 483  XXXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNGR 304
                DF + +  +                              Y   L++ +N+  +   
Sbjct: 1168 SLCEDFSKCMHTK------------------------------YIKDLLKRFNMGEAKVM 1197

Query: 303  KYPLDSGAKLGEDEAANIKD---YQALIGSLIYLTNTRLDIQYPVSLLARAMHNPCKSHS 133
            K P+ S  KL  DE     D   Y+ +IGSL+YLT +R DI Y V L AR    P +SH 
Sbjct: 1198 KTPMSSSIKLDMDEKGKSIDSTMYRGMIGSLLYLTASRPDIMYSVCLCARFQSCPKESHL 1257

Query: 132  KVVMGILQYIKGTLSLGLKFMKNDDLTIESYCDANF 25
              V  IL+Y+KGT+S+GL + K D+  +  + DA+F
Sbjct: 1258 SAVKRILRYLKGTMSIGLWYPKGDNFELIGFSDADF 1293


>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score =  208 bits (529), Expect(2) = 2e-92
 Identities = 111/341 (32%), Positives = 193/341 (56%), Gaps = 7/341 (2%)
 Frame = -2

Query: 1011 KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 832
            K N W L +LP+G + +GC+W++  K  P+GS++KYK+R+V +GF+QK  IDY DTF P 
Sbjct: 797  KNNTWTLVDLPKGAKPIGCKWIFKKKYHPDGSIEKYKARLVAKGFTQKHNIDYFDTFAPV 856

Query: 831  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PK--CYEDQNNLSCKILK 664
             ++ +I+ +++LA+     +H    K+ FLNG + EEIYM  P+      Q    CK+LK
Sbjct: 857  TRISSIRVLLALASIHKLVIHQMDVKTTFLNGELEEEIYMTQPEGCVVLGQKEKVCKLLK 916

Query: 663  SLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLAFHVXXXXXXXXXX 484
            SLYGLK AP+ W++KL++ L  +GF+ + +D  ++    N   V++  +V          
Sbjct: 917  SLYGLKQAPKQWHEKLDNVLLCEGFSTNDADKCVYSRSENGEYVIICLYVDDMLIFGTCN 976

Query: 483  XXXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNGR 304
                  K  L  +FE+ D+G     LG+++ +  +  +L+QE Y  KL++++   +    
Sbjct: 977  DIVFKTKLFLGSKFEMKDMGEASVILGVKIIRKGDSILLSQEKYTEKLLKKFGYYDFKSV 1036

Query: 303  KYPLDSGAKLGEDEAANIK--DYQALIGSLIYLTN-TRLDIQYPVSLLARAMHNPCKSHS 133
              P D+ +KL ++   +I    Y  +IGSL++L + +R DI Y V  L+R    P + H 
Sbjct: 1037 STPYDANSKLKKNRGESISQTQYAQIIGSLLHLMSFSRPDIAYAVGRLSRCTQCPSQDHW 1096

Query: 132  KVVMGILQYIKGTLSLGLKFMKNDDLTIESYCDANFGKDEE 10
            + +  +++Y++GT+   +++       +E Y DAN+  D +
Sbjct: 1097 EALARLMKYLRGTMDYAIEY-SGFPAVLEGYSDANWISDSD 1136



 Score =  161 bits (407), Expect(2) = 2e-92
 Identities = 116/422 (27%), Positives = 205/422 (48%), Gaps = 16/422 (3%)
 Frame = -1

Query: 2224 VIISQNNYQIK---------VLTFEDIADYATNLVEI----EKFHKKLGHLNYKYLHISK 2084
            ++I++NN  +          VL   +I + +T+   I    + +H +LGH+N  Y+ I  
Sbjct: 413  IVITKNNVFVGKGYCDQGLFVLNISEIMNESTSSAYIVDSYDIWHARLGHVNSSYV-IKL 471

Query: 2083 QNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*GFRAKKFLELIHSDICGSMPYKTHIVY 1904
            Q L                 +I  H K        +  K L LIH+D+       +    
Sbjct: 472  QRLG----------------LINMHDKE-----SSKCDKILGLIHTDLADLKQTMSRGGK 510

Query: 1903 IYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEKSYKIGCLRSDGGTEYNSIIF 1724
             YF+TFIDD+SRY  VYL+K K + F  F+ ++  V+ + + KI  +RSD G EY  ++F
Sbjct: 511  NYFVTFIDDFSRYTKVYLIKHKDEAFDMFLTYKAEVENQLNKKIKRIRSDRGGEY--VLF 568

Query: 1723 KNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLLHDANLDKTWWGEALLTTNYI 1544
             ++C  +GI  +VT PY+P+ NGV+ER NRTL E +  +L  +N     WGE+LLT  ++
Sbjct: 569  NDYCVKEGIIHEVTPPYSPESNGVAERKNRTLKEMMNAMLISSNAPDNLWGESLLTACFL 628

Query: 1543 TNHWPNKALHMKSPIEMWYGVKPNISHFMEFGKTYYYLIPKEKWRKLDDKAKKGIFIGYP 1364
             N  P++    K+P E+W G +PN+ +   +G     ++P  K RK+  K    +F+GY 
Sbjct: 629  QNRIPHRKTG-KTPYELWKGYQPNLKYLRVWGSLAKVMLPDPKKRKIGSKTSDCMFLGYA 687

Query: 1363 TGTKGYRLIDMETRNIIISREIKEADTESYEYDKTIQQNAPKNKNLLDKIETTIPKGFKK 1184
              +  YR + + +  I  +  ++  + E +E+   ++ +   ++  +D +  T+ +  ++
Sbjct: 688  EHSAAYRFLVLNSDIIERNTIVETKNAEFFEHIFPLKSSG-TSEQPIDSVSDTLSEDVRR 746

Query: 1183 *PLWYRLMM*EAENFIKEKTIEANICFPIDLAIPKS---PTEAIKKQHWKNAMDEEMTNM 1013
                       ++   KE +   +    +    P S    T A   +HW  A+  E+ ++
Sbjct: 747  -----------SKRQRKETSFGNDFYTYLVENDPISFVEATSAPDAKHWDKAIKTELESI 795

Query: 1012 KK 1007
            KK
Sbjct: 796  KK 797


>gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1075

 Score =  212 bits (539), Expect(2) = 4e-92
 Identities = 121/337 (35%), Positives = 190/337 (56%), Gaps = 7/337 (2%)
 Frame = -2

Query: 999  WRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPTAKMQ 820
            W +  LP+G R +G R +   KLKP+G++DK+K+R+V +G++Q++G DY DTF P A M 
Sbjct: 712  WEITHLPQGYRAIGYRAIGCKKLKPDGTIDKFKARLVAKGYTQRQGEDYFDTFSPVAHMP 771

Query: 819  TIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCY--EDQNNLSCKILKSLYG 652
            TI+++++LA   G+++H    K+AFLNG + EEIYM+ P  +    Q +  CK+ KSLYG
Sbjct: 772  TIRALVALAAAYGYKIHQMDVKTAFLNGELEEEIYMQQPDGFVIPGQEDKVCKLEKSLYG 831

Query: 651  LK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLAFHVXXXXXXXXXXXXXX 472
            LK AP  W++K +  L S GFT + +D  ++        V+L  +V              
Sbjct: 832  LKQAPMQWHEKFDKTLISAGFTVNDADKCVYSRFDGDIGVILCLYVDDILILGTNLNIIS 891

Query: 471  DFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNGRKYPL 292
            + K  L  +F++ DLG  +  L +++ K + G+ LNQ  Y  KL+  +   NS     P 
Sbjct: 892  EIKSYLSNKFDMKDLGEAKVILNIKIQKKDKGFELNQSHYVEKLLHRFGHFNSKSTATPY 951

Query: 291  DSGAKLGEDEAANIKD--YQALIGSLIYLTN-TRLDIQYPVSLLARAMHNPCKSHSKVVM 121
            D   KL +++   +    +  +IGSL+YL N TR +I Y VS L+R    P  +H   + 
Sbjct: 952  DPCLKLHKNQGQGLDQVKFAQIIGSLMYLANTTRPNISYAVSRLSRYSSKPDSNHWHALE 1011

Query: 120  GILQYIKGTLSLGLKFMKNDDLTIESYCDANFGKDEE 10
             +L+Y+KGT++ GL F       +E Y DAN+  D +
Sbjct: 1012 RVLRYLKGTMNQGL-FYSGFPAVLEGYSDANWITDSD 1047



 Score =  156 bits (394), Expect(2) = 4e-92
 Identities = 100/301 (33%), Positives = 153/301 (50%), Gaps = 5/301 (1%)
 Frame = -1

Query: 1900 YFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQIEKSYKIGCLRSDGGTEYNSIIFK 1721
            YFITFIDD S+YC+VYLL+ K + F+ F  F+   + +   KI  LRSD G EY SI F 
Sbjct: 414  YFITFIDDCSKYCYVYLLRTKDEAFEHFKIFKAEAENQLDLKIKILRSDRGGEYLSIEFS 473

Query: 1720 NFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRCLLHDANLDKTWWGEALLTTNYIT 1541
             F +  GI  + T PY+PQ NGV+ER NRTL   V  +L ++ L    WGEAL T  ++ 
Sbjct: 474  KFHQEHGIIHETTPPYSPQSNGVAERKNRTLTNLVNAMLSNSGLPNYMWGEALYTACFVL 533

Query: 1540 NHWPNKALHMKSPIEMWYGVKPNISHFMEFGKTYYYLIPKEKWRKLDDKAKKGIFIGYPT 1361
            N  P K   + +P E+W G KPN++    +G      IP  K RKL  K    +FIGY  
Sbjct: 534  NRVPAKGTEV-TPYELWKGRKPNLNFLKVWGCLAKVNIPVVKKRKLGPKTVDCVFIGYAQ 592

Query: 1360 GTKGYR--LIDMETRNIIISREIKEADTESYEYDKTIQQNAPKNKNLLDKIETTIPKGFK 1187
             +  YR  ++  ET  +  +  ++  DT  +E    ++  +P ++ +  +   +I     
Sbjct: 593  NSLAYRFLVVKSETTEVRENTVMESRDTTFFEDTFPLKVKSPSSEPISVEPRISISSDDS 652

Query: 1186 K*PLWYRLMM*EAENFIKEKTIEANICFPIDLAIPKSPTEAI---KKQHWKNAMDEEMTN 1016
                   L +  ++    EKT   +    +   +P + +EA    +  +WK A+  EM +
Sbjct: 653  -------LNLRRSKRSRTEKTFGDDFIIYLVDDVPSTLSEAFASAEAAYWKEAVQSEMDS 705

Query: 1015 M 1013
            +
Sbjct: 706  I 706


>emb|CAN68682.1| hypothetical protein VITISV_024814 [Vitis vinifera]
          Length = 1248

 Score =  201 bits (512), Expect(2) = 1e-88
 Identities = 120/339 (35%), Positives = 184/339 (54%), Gaps = 10/339 (2%)
 Frame = -2

Query: 1011 KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 832
            K   W L +LP GK+ VGC+W+YTVK + +GS+++YK+R+V +G++Q  GIDY++TF P 
Sbjct: 795  KNKTWELVKLPTGKKPVGCKWVYTVKYRADGSIERYKARLVAKGYAQTYGIDYQETFAPV 854

Query: 831  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYEDQNNLS----CKI 670
            AKM T++ ++SL     W+L  F  K+AFL+G + EEIYM+ P  Y+  NNL+    CK+
Sbjct: 855  AKMNTVRVLLSLTANYNWDLQQFDVKNAFLHGELEEEIYMEVPPGYD--NNLAAHIVCKL 912

Query: 669  LKSLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREV-LLAFHVXXXXXXX 493
             K+LYGLK +PRAW+ +    + + G+ +S  D  LF    ++R +  L  +V       
Sbjct: 913  KKALYGLKQSPRAWFGRFARVIITMGYRQSQGDHMLFIKHSSSRRLTALLVYVDDIIVTG 972

Query: 492  XXXXXXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNS 313
                      + L +EFEI  LG ++ +L                 Y + L++E   T  
Sbjct: 973  NDDKERQVLNQCLAKEFEIKALGRLKYFL----------------KYVTDLLKETGKTAC 1016

Query: 312  NGRKYPLDSGAKLGE---DEAANIKDYQALIGSLIYLTNTRLDIQYPVSLLARAMHNPCK 142
                 P+D   +L E   D   + + YQ L+G LIYL++TRLDI Y V+           
Sbjct: 1017 KPASTPIDPNLRLEEAENDATVDKEMYQRLVGRLIYLSHTRLDIAYVVA----------- 1065

Query: 141  SHSKVVMGILQYIKGTLSLGLKFMKNDDLTIESYCDANF 25
                    +LQY+KGT   G+ F +N  L +E+Y DA++
Sbjct: 1066 ------YRVLQYLKGTPGKGILFKRNGGLVLEAYTDADY 1098



 Score =  155 bits (391), Expect(2) = 1e-88
 Identities = 109/402 (27%), Positives = 199/402 (49%), Gaps = 15/402 (3%)
 Frame = -1

Query: 2167 DYATNLVEIEKFHKKLGHLNYKYLHISKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT 1988
            D++ N  ++   H++LGH +++ + I   +L      + +   +CE C + KH ++ FP 
Sbjct: 409  DFSFNKEKVWLHHRRLGHPSFRVIKILFPSLFKG---LDVEHFHCEVCELAKHKRVSFPI 465

Query: 1987 *GFRAKKFLELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKF 1808
               R+     LIHSDI G  P        +F++FIDD +R  W++LLK K DV      F
Sbjct: 466  SNKRSFIPFYLIHSDIWGPSPIPNITGAKWFVSFIDDCTRVTWIFLLKHKFDVSTVLPNF 525

Query: 1807 RKLVQIEKSYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTL 1628
              +++ +    I   RSD   +Y + +   + + +GI  + +    PQQNGV+ER N  L
Sbjct: 526  CSMIKTQFGVNIKRFRSDNAKDYFNQVLTPYFQREGIIHESSCVNTPQQNGVAERKNGHL 585

Query: 1627 VEAVRCLLHDANLDKTWWGEALLTTNYITNHWPNKALHMKSPIEMWYGVKPNISHFME-- 1454
            + + R  +   N+ K++WGEA+LTT ++ N  P++ L  KSP+++     PN+       
Sbjct: 586  LNSTRSFMFQKNVPKSFWGEAVLTTAHLINRLPSRILGFKSPMDILSTFYPNLHTTNNLV 645

Query: 1453 ---FGKTYYYLIPKEKWRKLDDKAKKGIFIGYPTGTKGYRLIDMETRNIIISREIKEADT 1283
               FG   +  +  +   KLD +A K +F+GY +  KG      +   +  S ++++ + 
Sbjct: 646  PRIFGCVAFVHVHNQNRGKLDPRALKCVFLGYSSTQKG------KKTGVPESVQVQDFNP 699

Query: 1282 ESYEYDKTIQQNAPKNKNLLDKIETTIP----KGFKK------*PLWYRLMM*EAENFIK 1133
             S E + TI   + ++K+ ++  +  +P    KG ++       PL + L   +     +
Sbjct: 700  NS-ENEVTISNPSLQSKSHVNNDDQDLPIVVRKGIRECTNQPLYPLTHFLSFKKFSPSHR 758

Query: 1132 EKTIEANICFPIDLAIPKSPTEAIKKQHWKNAMDEEMTNMKK 1007
               +  N      ++IP + +EA+  + WK AM+ EM  ++K
Sbjct: 759  AFLVSLN-----TISIPTTVSEALTDEKWKQAMNVEMEALEK 795


>gb|AAT38005.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|49328115|gb|AAT58813.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1198

 Score =  188 bits (477), Expect(2) = 4e-88
 Identities = 111/333 (33%), Positives = 182/333 (54%), Gaps = 5/333 (1%)
 Frame = -2

Query: 999  WRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPTAKMQ 820
            W + + P G + VGC+W++  KL+P+G+++KYK+R++ +G++QKEG D+ DT+ P A++ 
Sbjct: 757  WEMTDQPYGCKPVGCKWVFKKKLRPDGTIEKYKARLIAKGYTQKEGEDFFDTYSPVARLT 816

Query: 819  TIQSIISLATKKGWELHHFKSAFLNGNITEEIYMK*PKCY--EDQNNLSCKILKSLYGLK 646
            TI+  +  +  K W L   +  FL   + EEIYM  P  +  E Q    CK+LKSLYGLK
Sbjct: 817  TIRPHMIFSFIK-WTL---RQLFLM-ELDEEIYMDQPDEFVVESQEGKVCKLLKSLYGLK 871

Query: 645  *APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLAFHVXXXXXXXXXXXXXXDF 466
             AP+ W++K +  L+S GF  + +D  ++Y       V+L  +V              + 
Sbjct: 872  QAPKQWHEKFDKTLTSVGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEV 931

Query: 465  KRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNGRKYPLDS 286
            K  L + F++ DLG  +  L ++L +  NG  L Q  Y  K++  +   +S     P D 
Sbjct: 932  KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKSSPTPYDP 991

Query: 285  GAKLGEDE--AANIKDYQALIGSLIYLTN-TRLDIQYPVSLLARAMHNPCKSHSKVVMGI 115
               L +++    N  +Y  +IGSL+YL + TR DI + VS L+    NP   H + +  +
Sbjct: 992  RLLLRKNKRITRNQLEYSQIIGSLMYLASATRPDISFAVSKLSWFTSNPGDDHWRALERV 1051

Query: 114  LQYIKGTLSLGLKFMKNDDLTIESYCDANFGKD 16
            ++Y+KGT+ LGL +       +E Y D+N+  D
Sbjct: 1052 MRYLKGTMELGLHY-SGYPAVLEGYSDSNWISD 1083



 Score =  166 bits (421), Expect(2) = 4e-88
 Identities = 129/406 (31%), Positives = 198/406 (48%), Gaps = 28/406 (6%)
 Frame = -1

Query: 2146 EIEKFHKKLGHLNYKYLH-ISKQNLDGSPNKISIPK-QNCESCVIGKHHKLPFPT*GFRA 1973
            E   +H +L H+N+  +  +S   L     K SI K   C SCV  K  + P      R 
Sbjct: 364  EANVWHSRLCHINFGLMSWLSSMCLIP---KFSIVKGSKCHSCVQSKQPRKPHKAVEERN 420

Query: 1972 KKFLELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQ 1793
               LEL+HSD+C      T     YF+T IDD +R+C+VYLLK K +    F  ++  V+
Sbjct: 421  LAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVE 480

Query: 1792 IEKSYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVR 1613
             +   KI  LRSD G E+ S  F  FC   GI  + T PY+P+ NG++ER NRTL + V 
Sbjct: 481  NQLDRKIKRLRSDRGGEFFSNEFDLFCVEHGIIHERTPPYSPESNGIAERKNRTLTDLVN 540

Query: 1612 CLLHDANLDKTWWGEALLTTNYITNHWPNKALHMKSPIEMWYGVKPNISHFMEFGKTYYY 1433
             +L  A L K W GEALLT+N + N  PN+    K+P E+W G KP++S+   +G     
Sbjct: 541  AMLDTAGLPKAWLGEALLTSNQVLNRVPNRNKD-KTPYEIWIGRKPSLSYLRTWGCLAKV 599

Query: 1432 LIPKEKWRKLDDKAKKGIFIGYPTGTKGYRLI-------DMETRNIIISRE--------- 1301
             +P  K RKL  K    +F+GY      YR +       DM    I+ SR+         
Sbjct: 600  NVPITKKRKLGPKTVDCVFLGYAHHNIAYRFLIVKSEVPDMHVGTIMKSRDATFFERFFP 659

Query: 1300 IKEADTESYEYDKTI-------QQNAPKNKNLLDKIETTIPKGFKK*PLWYRLMM*EAEN 1142
            +K+  + S +  + I       +Q    ++++ ++ ++  P+  K+  +        A++
Sbjct: 660  MKDTHSSSSQPSEIIPNSITPPEQTEHTHEHVTEEDDSEAPRRSKRQRM--------AKS 711

Query: 1141 FIKEKTIEANICFPIDLAIPKSPTEAIKK---QHWKNAMDEEMTNM 1013
            F  + T+     + +D   PKS +EA       +WK A+  EM ++
Sbjct: 712  FGDDFTV-----YLVD-DTPKSISEAYASPDADYWKEAVRSEMDSI 751


>gb|EFA06256.1| hypothetical protein TcasGA2_TC009115 [Tribolium castaneum]
          Length = 1267

 Score =  178 bits (451), Expect(2) = 5e-86
 Identities = 122/400 (30%), Positives = 190/400 (47%), Gaps = 21/400 (5%)
 Frame = -1

Query: 2143 IEKFHKKLGHLNYKYLH-ISKQNL-DGSPNKISIPKQNCESCVIGKHHKLPFPT*GFRAK 1970
            ++ +H++LGH+N K +  ++K+ L D          Q CE C  GK HK+P+     R  
Sbjct: 402  LQTWHQRLGHINMKTIQEMAKRGLIDAHGTTDDEVNQICEGCRYGKQHKMPYHKIEKRNY 461

Query: 1969 KFLELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQI 1790
            K  ELIH+D+CG M   +     +FI F DD + +  VY +K K D    F +F  + + 
Sbjct: 462  KAGELIHTDVCGPMSVDSVGGCRFFILFKDDSTNFRTVYFVKHKSDALDCFKQFYYMCKN 521

Query: 1789 EKSYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRC 1610
            +  + I  LR+D G EY +  F  F +++GI  +   PY  +QNG +ER NRTLVE+ R 
Sbjct: 522  KFGHPIKTLRADNGGEYVNQEFHKFLKDRGIILETCAPYCHEQNGKAERENRTLVESARS 581

Query: 1609 LLHDANLDKTWWGEALLTTNYITNHWPNKALHMKSPIEMWYGVKPNISHFMEFGKTYYYL 1430
            ++   NL    W EA+ T  YI N   N      +P E+W    P++ H   FG   Y  
Sbjct: 582  MIFTKNLPLYLWAEAVNTAAYILNRTTNSINQEVTPYELWTNKTPDLKHIRIFGSDAYMH 641

Query: 1429 IPKEKWRKLDDKAKKGIFIGYPTGTKGYRLIDMETRNIIISREI--------------KE 1292
            +P    +KL+ K+KK I +GY   +  YRL D  TR I I+R +              K 
Sbjct: 642  VPDNLRKKLEPKSKKLILVGYDNDSTNYRLFDRATRKIKIARNVTFGEDNELTLPRANKI 701

Query: 1291 ADTESYEYDKTIQQNAPKNKNLLDKIETTIP-----KGFKK*PLWYRLMM*EAENFIKEK 1127
              T+    D+   ++  +N    +  E  +P     +G+   P          ++++   
Sbjct: 702  VITDEIHDDERNLEHNNQNDQTKEPEEEPVPETEDRRGYNLRPREILKTPNNLDDYV-IN 760

Query: 1126 TIEANICFPIDLAIPKSPTEAIKKQHWKNAMDEEMTNMKK 1007
             +E +     D AI  S +E      W+NA+ EE+  +KK
Sbjct: 761  IVEGDTPNTYDEAITSSESE-----EWRNAIQEELDALKK 795



 Score =  169 bits (429), Expect(2) = 5e-86
 Identities = 96/325 (29%), Positives = 171/325 (52%), Gaps = 15/325 (4%)
 Frame = -2

Query: 1011 KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 832
            K + W L  LP  K+ +G +W++ +K  PN    +YK+R+  +GF+Q EG+DY +T+ PT
Sbjct: 795  KNDTWNLVNLPVDKKAIGSKWVFKIKRSPNNKNIRYKARLCAKGFAQTEGVDYNETYAPT 854

Query: 831  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYEDQNNLSCKILKSL 658
             +  TI+ ++++A ++ +++  F  K+AFL+G + E IYM+ P       N   K+ KSL
Sbjct: 855  TRYDTIRILLAVAARENYQMIQFDVKTAFLHGELEENIYMQPPPGLSVPPNSVLKLKKSL 914

Query: 657  YGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLAFHVXXXXXXXXXXXX 478
            YGLK +PR W +K  +FL   G  +  SD  ++    N + ++L  +V            
Sbjct: 915  YGLKQSPRCWNRKFNEFLELFGLKQCESDKCVYTGKFNEQLMILLLYVDDGLILAKDMDT 974

Query: 477  XXDFKRKLREEFEITDLGNVECYLGLQLHKSN------NGYVLNQEAYASKLIEEYNLTN 316
                  KL+  FE+T +   E ++GL++ + +      N   ++   +  ++I+ +N+ +
Sbjct: 975  LHKMGNKLKSAFEVT-ICEPEYFVGLEIKRQSDPKVGKNSIFIHLSNFIDRIIDRFNMND 1033

Query: 315  SNGRKYPLDSGAKLGEDEAANIKD------YQALIGSLIYLT-NTRLDIQYPVSLLARAM 157
            +     P D  A L + +    K+      Y+  IG L++   + R DI Y V++++R  
Sbjct: 1034 ARTCNTPADPNAILSQSDPNEPKNNDVLFPYREAIGCLMFAAISARPDIMYAVNVVSRYQ 1093

Query: 156  HNPCKSHSKVVMGILQYIKGTLSLG 82
            +NP  +H   V  I +Y+KGT  LG
Sbjct: 1094 NNPTIAHVNAVKRIFKYLKGTKELG 1118


>emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera]
          Length = 1442

 Score =  188 bits (477), Expect(2) = 2e-84
 Identities = 107/336 (31%), Positives = 178/336 (52%), Gaps = 7/336 (2%)
 Frame = -2

Query: 1011 KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 832
            K   W L         VGC+W++ VK K +GS+DK+K+R+V + ++Q+ G+DYK+TF P 
Sbjct: 891  KHGTWDLVPPLPNCTPVGCKWVFRVKRKADGSVDKFKTRLVAKDYTQRPGLDYKETFSPV 950

Query: 831  AKMQTIQSIISLATKKGWELHH--FKSAFLNGNITEEIYMK*PKCYEDQNNLS--CKILK 664
             +  TI+ ++++A   GW L      +AFL+G +TE +YM  P  ++D +     C++ K
Sbjct: 951  VRPATIRCVLTIAVMNGWPLRQMDINNAFLHGTLTETVYMMQPPGFKDTSKPDHVCRLRK 1010

Query: 663  SLYGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLAFHVXXXXXXXXXX 484
            ++YGL+ APRAWY  L   L   GF  S +D +LF             +V          
Sbjct: 1011 AIYGLRQAPRAWYTTLRTALFQLGFKNSKADSSLFIYTHGPIICYFLVYVDDLVITGNDI 1070

Query: 483  XXXXDFKRKLREEFEITDLGNVECYLGLQLHKSNNGYVLNQEAYASKLIEEYNLTNSNGR 304
                   +KL E F + D+GN   +LG+++  +  G  L+Q  Y   L+   N+  +   
Sbjct: 1071 QFVDHIIQKLGENFSLKDMGNHSFFLGVEVIPTRAGLFLSQHQYIRDLLSTTNMLGAKDV 1130

Query: 303  KYPLDSGA--KLGEDEA-ANIKDYQALIGSLIYLTNTRLDIQYPVSLLARAMHNPCKSHS 133
              PL + A  KL +  A  +  D++ +IGSL YL+ TR DI + V+ L++ MH P  +H 
Sbjct: 1131 STPLSTTASLKLFDGTAPVDSTDFRRVIGSLQYLSLTRPDISFAVNKLSQFMHKPTTAHW 1190

Query: 132  KVVMGILQYIKGTLSLGLKFMKNDDLTIESYCDANF 25
                 +L+Y+K T+  G++  +N    + ++ DA++
Sbjct: 1191 TATKRLLRYLKQTIFHGIQLTRNTTSVLTTFSDADW 1226



 Score =  154 bits (390), Expect(2) = 2e-84
 Identities = 117/389 (30%), Positives = 178/389 (45%), Gaps = 10/389 (2%)
 Frame = -1

Query: 2143 IEKFHKKLGHLNYKYLH--ISKQNLDGSPNKISIPKQNCESCVIGKHHKLPFPT*GFRAK 1970
            ++ +HK+LGH +Y  +   +S  +L  + NKI++    C SC I K H+ PF T    + 
Sbjct: 518  LDGWHKRLGHPSYPIVKNLVSIFSLPTTTNKITML---CRSCSINKSHQQPFRTTSLSST 574

Query: 1969 KFLELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQI 1790
              L++I++D+ G           Y++ F+D Y+ Y W Y +  K  V   F +F+  V+ 
Sbjct: 575  GPLKIIYTDVWGPAHSTGLDGSRYYLLFVDHYTIYMWFYPMATKSSVSTIFPQFKIFVET 634

Query: 1789 EKSYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRC 1610
                KI  L SD G E+ S+  K F    GI    T PY PQQNGVSER +R LVE    
Sbjct: 635  RFQAKIKTLYSDNGGEFISL--KPFLNLHGISHYTTAPYTPQQNGVSERRHRHLVETGLT 692

Query: 1609 LLHDANLDKTWWGEALLTTNYITNHWPNKALHMKSPIEMWYGVKPNISHFMEFGKTYYYL 1430
            LL DA+L  ++W  A  T  Y+ N  P   L  KSP E  +G KPN     +FG   Y L
Sbjct: 693  LLSDASLPLSYWPHAFRTATYLINRQPTPLLTNKSPFEALFGQKPNYLKLKKFGSLCYPL 752

Query: 1429 IPKEKWRKLDDKAKKGIFIGYPTGTKGYRLIDM-----ETRNIIISREIKEADTESYEYD 1265
                   K+  K+   I    P  +  + L D+        N++IS +     +    + 
Sbjct: 753  TRPYNNXKMQPKS---IPCKPPLSSPNFPLXDVLRNSGSHSNVLISHDXVLXSSLHPTHT 809

Query: 1264 KTIQQNAPKNKNLLDK--IETTIPKGFKK*PLWYRLMM*EAENFIKEKTIEANICFPIDL 1091
             T+        + +    ++T  P+        +++      N  K K +      PI L
Sbjct: 810  HTVADLTLSQSHSIPPSCVQTGNPR-------LHKMTTRSMNNIFKPKQLHLVSKHPIPL 862

Query: 1090 AI-PKSPTEAIKKQHWKNAMDEEMTNMKK 1007
            AI P   T+A+    W++AM  E+T + K
Sbjct: 863  AIEPTCATQAVNHPQWRDAMSTELTALMK 891


>ref|XP_001813413.1| PREDICTED: similar to copia-type polyprotein, putative [Tribolium
            castaneum]
          Length = 1269

 Score =  178 bits (451), Expect(2) = 8e-83
 Identities = 122/400 (30%), Positives = 190/400 (47%), Gaps = 21/400 (5%)
 Frame = -1

Query: 2143 IEKFHKKLGHLNYKYLH-ISKQNL-DGSPNKISIPKQNCESCVIGKHHKLPFPT*GFRAK 1970
            ++ +H++LGH+N K +  ++K+ L D          Q CE C  GK HK+P+     R  
Sbjct: 402  LQTWHQRLGHINMKTIQEMAKRGLIDAHGTTDDEVNQICEGCRYGKQHKMPYHKIEKRNY 461

Query: 1969 KFLELIHSDICGSMPYKTHIVYIYFITFIDDYSRYCWVYLLKIKKDVFQTFIKFRKLVQI 1790
            K  ELIH+D+CG M   +     +FI F DD + +  VY +K K D    F +F  + + 
Sbjct: 462  KAGELIHTDVCGPMSVDSVGGCRFFILFKDDSTNFRTVYFVKHKSDALDCFKQFYYMCKN 521

Query: 1789 EKSYKIGCLRSDGGTEYNSIIFKNFCENKGIKRQVTVPYNPQQNGVSER*NRTLVEAVRC 1610
            +  + I  LR+D G EY +  F  F +++GI  +   PY  +QNG +ER NRTLVE+ R 
Sbjct: 522  KFGHPIKTLRADNGGEYVNQEFHKFLKDRGIILETCAPYCHEQNGKAERENRTLVESARS 581

Query: 1609 LLHDANLDKTWWGEALLTTNYITNHWPNKALHMKSPIEMWYGVKPNISHFMEFGKTYYYL 1430
            ++   NL    W EA+ T  YI N   N      +P E+W    P++ H   FG   Y  
Sbjct: 582  MIFTKNLPLYLWAEAVNTAAYILNRTTNSINQEVTPYELWTNKTPDLKHIRIFGSDAYMH 641

Query: 1429 IPKEKWRKLDDKAKKGIFIGYPTGTKGYRLIDMETRNIIISREI--------------KE 1292
            +P    +KL+ K+KK I +GY   +  YRL D  TR I I+R +              K 
Sbjct: 642  VPDNLRKKLEPKSKKLILVGYDNDSTNYRLFDRATRKIKIARNVTFGEDNELTLPRANKI 701

Query: 1291 ADTESYEYDKTIQQNAPKNKNLLDKIETTIP-----KGFKK*PLWYRLMM*EAENFIKEK 1127
              T+    D+   ++  +N    +  E  +P     +G+   P          ++++   
Sbjct: 702  VITDEIHDDERNLEHNNQNDQTKEPEEEPVPETEDRRGYNLRPREILKTPNNLDDYV-IN 760

Query: 1126 TIEANICFPIDLAIPKSPTEAIKKQHWKNAMDEEMTNMKK 1007
             +E +     D AI  S +E      W+NA+ EE+  +KK
Sbjct: 761  IVEGDTPNTYDEAITSSESE-----EWRNAIQEELDALKK 795



 Score =  159 bits (401), Expect(2) = 8e-83
 Identities = 94/322 (29%), Positives = 168/322 (52%), Gaps = 15/322 (4%)
 Frame = -2

Query: 1011 KKNVWRLEELPEGKREVGCRWLYTVKLKPNGSLDKYKSRIVVQGFSQKEGIDYKDTFGPT 832
            K + W L  LP  K+ +G +W++ +K  PN    +YK+R+  +GF+Q EG+DY +T+ PT
Sbjct: 795  KNDTWNLVNLPVDKKAIGSKWVFKIKRSPNNKNIRYKARLCAKGFAQTEGVDYNETYAPT 854

Query: 831  AKMQTIQSIISLATKKGWELHHF--KSAFLNGNITEEIYMK*PKCYEDQNNLSCKILKSL 658
             +  TI+ ++++A ++ +++  F  K+AFL+G + E IYM+ P       N   K+ KSL
Sbjct: 855  TRYDTIRILLAVAARENYQMIQFDVKTAFLHGELEENIYMQPPPGLSVPPNSVLKLKKSL 914

Query: 657  YGLK*APRAWYKKLEDFLSSQGFTKSISDPNLFYIG*NTREVLLAFHVXXXXXXXXXXXX 478
            YGLK +PR W +K  +FL   G  +  SD  ++    N + ++L  +V            
Sbjct: 915  YGLKQSPRCWNRKFNEFLELFGLKQCESDKCVYTGKFNEQLMILLLYVDDGLILAKDMDT 974

Query: 477  XXDFKRKLREEFEITDLGNVECYLGLQLHKSN------NGYVLNQEAYASKLIEEYNLTN 316
                  KL+  FE+T +   E ++GL++ + +      N   ++   +  ++I+ +N+ +
Sbjct: 975  LHKMGNKLKSAFEVT-ICEPEYFVGLEIKRQSDPKVGKNSIFIHLSNFIDRIIDRFNMND 1033

Query: 315  SNGRKYPLDSGAKLGEDEAANIKD------YQALIGSLIYLT-NTRLDIQYPVSLLARAM 157
            +     P D  A L + +    K+      Y+  IG L++   + R DI Y V++++R  
Sbjct: 1034 ARTCNTPADPNAILSQSDPNEPKNNDVLFPYREAIGCLMFAAISARPDIMYAVNVVSRYQ 1093

Query: 156  HNPCKSHSKVVMGILQYIKGTL 91
            +NP  +HS   +GIL    G L
Sbjct: 1094 NNPTIAHS---LGILYNNSGKL 1112