BLASTX nr result
ID: Ephedra27_contig00013744
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00013744
(489 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006485600.1| PREDICTED: uncharacterized protein LOC102619... 119 4e-25
ref|XP_006436494.1| hypothetical protein CICLE_v10031516mg [Citr... 119 4e-25
ref|XP_006848911.1| hypothetical protein AMTR_s00161p00064200 [A... 118 7e-25
emb|CBI31423.3| unnamed protein product [Vitis vinifera] 117 2e-24
ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine... 117 2e-24
ref|XP_004308770.1| PREDICTED: uncharacterized RNA pseudouridine... 116 4e-24
ref|XP_006361680.1| PREDICTED: uncharacterized protein LOC102601... 115 5e-24
ref|XP_004250054.1| PREDICTED: uncharacterized RNA pseudouridine... 115 5e-24
ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine... 115 6e-24
gb|EOY18776.1| Pseudouridine synthase family protein isoform 4 [... 115 8e-24
gb|EOY18775.1| Pseudouridine synthase family protein isoform 3 [... 115 8e-24
gb|EOY18774.1| Pseudouridine synthase family protein isoform 2, ... 115 8e-24
ref|XP_006294188.1| hypothetical protein CARUB_v10023183mg, part... 114 1e-23
ref|NP_181447.2| protein SUPPRESSOR OF VARIEGATION 1 [Arabidopsi... 114 1e-23
ref|XP_002879786.1| pseudouridine synthase family protein [Arabi... 114 1e-23
gb|AAC28992.1| unknown protein [Arabidopsis thaliana] 114 1e-23
gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabi... 112 4e-23
ref|XP_001765369.1| predicted protein [Physcomitrella patens] gi... 110 1e-22
ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Popu... 110 2e-22
gb|EOY18773.1| Pseudouridine synthase family protein isoform 1 [... 108 7e-22
>ref|XP_006485600.1| PREDICTED: uncharacterized protein LOC102619728 [Citrus sinensis]
Length = 401
Score = 119 bits (298), Expect = 4e-25
Identities = 60/76 (78%), Positives = 67/76 (88%), Gaps = 1/76 (1%)
Frame = +2
Query: 263 SKAARRFYNDNFRE-PERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPF 439
SKAARRFYNDNFR+ PERLSKVLAAAGVASRR SEE+IF G+V+VNG CNTPQTRVDP
Sbjct: 135 SKAARRFYNDNFRDTPERLSKVLAAAGVASRRSSEELIFQGQVTVNGSVCNTPQTRVDPA 194
Query: 440 KDSINIDGKSLPKKLP 487
+D I ++GK LPKKLP
Sbjct: 195 RDIIYVNGKRLPKKLP 210
>ref|XP_006436494.1| hypothetical protein CICLE_v10031516mg [Citrus clementina]
gi|557538690|gb|ESR49734.1| hypothetical protein
CICLE_v10031516mg [Citrus clementina]
Length = 451
Score = 119 bits (298), Expect = 4e-25
Identities = 60/76 (78%), Positives = 67/76 (88%), Gaps = 1/76 (1%)
Frame = +2
Query: 263 SKAARRFYNDNFRE-PERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPF 439
SKAARRFYNDNFR+ PERLSKVLAAAGVASRR SEE+IF G+V+VNG CNTPQTRVDP
Sbjct: 185 SKAARRFYNDNFRDTPERLSKVLAAAGVASRRSSEELIFQGQVTVNGSVCNTPQTRVDPA 244
Query: 440 KDSINIDGKSLPKKLP 487
+D I ++GK LPKKLP
Sbjct: 245 RDIIYVNGKRLPKKLP 260
>ref|XP_006848911.1| hypothetical protein AMTR_s00161p00064200 [Amborella trichopoda]
gi|548852364|gb|ERN10492.1| hypothetical protein
AMTR_s00161p00064200 [Amborella trichopoda]
Length = 403
Score = 118 bits (296), Expect = 7e-25
Identities = 57/76 (75%), Positives = 64/76 (84%)
Frame = +2
Query: 260 HSKAARRFYNDNFREPERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPF 439
HSKAARRFYN NFREP+RLSKVLA+AGVASRR SEE+IF G+V+VNG CN PQTRVDP
Sbjct: 151 HSKAARRFYNQNFREPQRLSKVLASAGVASRRSSEELIFDGKVTVNGSVCNVPQTRVDPI 210
Query: 440 KDSINIDGKSLPKKLP 487
KD I ++G L KKLP
Sbjct: 211 KDVIYVNGSRLAKKLP 226
>emb|CBI31423.3| unnamed protein product [Vitis vinifera]
Length = 296
Score = 117 bits (293), Expect = 2e-24
Identities = 58/77 (75%), Positives = 67/77 (87%), Gaps = 1/77 (1%)
Frame = +2
Query: 260 HSKAARRFYNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDP 436
+SKAARRFYN+NFR+P +RLSKVLAAAGVASRR SEE+IF GRV+VNG CNTPQTRVDP
Sbjct: 29 YSKAARRFYNENFRDPPQRLSKVLAAAGVASRRNSEELIFEGRVTVNGSVCNTPQTRVDP 88
Query: 437 FKDSINIDGKSLPKKLP 487
+D I ++G LPKKLP
Sbjct: 89 ARDMIYVNGNRLPKKLP 105
>ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464
isoform 1 [Vitis vinifera]
Length = 393
Score = 117 bits (293), Expect = 2e-24
Identities = 58/77 (75%), Positives = 67/77 (87%), Gaps = 1/77 (1%)
Frame = +2
Query: 260 HSKAARRFYNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDP 436
+SKAARRFYN+NFR+P +RLSKVLAAAGVASRR SEE+IF GRV+VNG CNTPQTRVDP
Sbjct: 126 YSKAARRFYNENFRDPPQRLSKVLAAAGVASRRNSEELIFEGRVTVNGSVCNTPQTRVDP 185
Query: 437 FKDSINIDGKSLPKKLP 487
+D I ++G LPKKLP
Sbjct: 186 ARDMIYVNGNRLPKKLP 202
>ref|XP_004308770.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
[Fragaria vesca subsp. vesca]
Length = 397
Score = 116 bits (290), Expect = 4e-24
Identities = 56/76 (73%), Positives = 65/76 (85%)
Frame = +2
Query: 260 HSKAARRFYNDNFREPERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPF 439
HSKAARRFYN+NFRE +RLSKVLAAAGVASRR SE++IF G+V+VNG CNTPQT VDP
Sbjct: 124 HSKAARRFYNENFRESQRLSKVLAAAGVASRRSSEQLIFDGKVTVNGSVCNTPQTPVDPG 183
Query: 440 KDSINIDGKSLPKKLP 487
+D I ++G LPKKLP
Sbjct: 184 RDIIYVNGNRLPKKLP 199
>ref|XP_006361680.1| PREDICTED: uncharacterized protein LOC102601559 [Solanum tuberosum]
Length = 413
Score = 115 bits (289), Expect = 5e-24
Identities = 57/77 (74%), Positives = 66/77 (85%), Gaps = 1/77 (1%)
Frame = +2
Query: 260 HSKAARRFYNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDP 436
HSKAARRFYN+NFR+P +RLSKVLAAAGVASRR SEE+IF GRV+VNG C TPQT+VDP
Sbjct: 146 HSKAARRFYNENFRDPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCKTPQTKVDP 205
Query: 437 FKDSINIDGKSLPKKLP 487
+D I ++G LPKKLP
Sbjct: 206 ARDVIYVNGNRLPKKLP 222
>ref|XP_004250054.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
[Solanum lycopersicum]
Length = 414
Score = 115 bits (289), Expect = 5e-24
Identities = 57/77 (74%), Positives = 66/77 (85%), Gaps = 1/77 (1%)
Frame = +2
Query: 260 HSKAARRFYNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDP 436
HSKAARRFYN+NFR+P +RLSKVLAAAGVASRR SEE+IF GRV+VNG C TPQT+VDP
Sbjct: 147 HSKAARRFYNENFRDPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCKTPQTKVDP 206
Query: 437 FKDSINIDGKSLPKKLP 487
+D I ++G LPKKLP
Sbjct: 207 ARDVIYVNGNRLPKKLP 223
>ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
[Cucumis sativus] gi|449490423|ref|XP_004158601.1|
PREDICTED: uncharacterized RNA pseudouridine synthase
aq_1464-like [Cucumis sativus]
Length = 398
Score = 115 bits (288), Expect = 6e-24
Identities = 58/77 (75%), Positives = 65/77 (84%), Gaps = 1/77 (1%)
Frame = +2
Query: 260 HSKAARRFYNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDP 436
HSKAARRFYN+N RE +RLSKVLAAAGVASRR SEE+IF GRV+VNG CNTPQTRVDP
Sbjct: 131 HSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDP 190
Query: 437 FKDSINIDGKSLPKKLP 487
+D I ++G LPKKLP
Sbjct: 191 ARDIIYVNGNRLPKKLP 207
>gb|EOY18776.1| Pseudouridine synthase family protein isoform 4 [Theobroma cacao]
Length = 350
Score = 115 bits (287), Expect = 8e-24
Identities = 58/76 (76%), Positives = 65/76 (85%), Gaps = 1/76 (1%)
Frame = +2
Query: 263 SKAARRFYNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPF 439
SKAARRFYN+NF EP +RLSKVLAAAGVASRRGSEE+IF G+V+VNG CN PQTRVDP
Sbjct: 181 SKAARRFYNENFTEPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQTRVDPA 240
Query: 440 KDSINIDGKSLPKKLP 487
KD I ++G LPKKLP
Sbjct: 241 KDIIYVNGSRLPKKLP 256
>gb|EOY18775.1| Pseudouridine synthase family protein isoform 3 [Theobroma cacao]
Length = 374
Score = 115 bits (287), Expect = 8e-24
Identities = 58/76 (76%), Positives = 65/76 (85%), Gaps = 1/76 (1%)
Frame = +2
Query: 263 SKAARRFYNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPF 439
SKAARRFYN+NF EP +RLSKVLAAAGVASRRGSEE+IF G+V+VNG CN PQTRVDP
Sbjct: 181 SKAARRFYNENFTEPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQTRVDPA 240
Query: 440 KDSINIDGKSLPKKLP 487
KD I ++G LPKKLP
Sbjct: 241 KDIIYVNGSRLPKKLP 256
>gb|EOY18774.1| Pseudouridine synthase family protein isoform 2, partial [Theobroma
cacao]
Length = 398
Score = 115 bits (287), Expect = 8e-24
Identities = 58/76 (76%), Positives = 65/76 (85%), Gaps = 1/76 (1%)
Frame = +2
Query: 263 SKAARRFYNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPF 439
SKAARRFYN+NF EP +RLSKVLAAAGVASRRGSEE+IF G+V+VNG CN PQTRVDP
Sbjct: 132 SKAARRFYNENFTEPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQTRVDPA 191
Query: 440 KDSINIDGKSLPKKLP 487
KD I ++G LPKKLP
Sbjct: 192 KDIIYVNGSRLPKKLP 207
>ref|XP_006294188.1| hypothetical protein CARUB_v10023183mg, partial [Capsella rubella]
gi|482562896|gb|EOA27086.1| hypothetical protein
CARUB_v10023183mg, partial [Capsella rubella]
Length = 456
Score = 114 bits (286), Expect = 1e-23
Identities = 56/76 (73%), Positives = 67/76 (88%), Gaps = 1/76 (1%)
Frame = +2
Query: 263 SKAARRFYNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPF 439
SKAARRFYN+NF+EP +RLSKVLAAAGVASRR SEE+IF G+V+VNG+ CNTPQTRVDP
Sbjct: 190 SKAARRFYNENFKEPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCNTPQTRVDPS 249
Query: 440 KDSINIDGKSLPKKLP 487
+D I ++G +PKKLP
Sbjct: 250 RDIIYVNGNRIPKKLP 265
>ref|NP_181447.2| protein SUPPRESSOR OF VARIEGATION 1 [Arabidopsis thaliana]
gi|21617894|gb|AAM66944.1| unknown [Arabidopsis
thaliana] gi|26450440|dbj|BAC42334.1| unknown protein
[Arabidopsis thaliana] gi|330254545|gb|AEC09639.1|
pseudouridine synthase family protein [Arabidopsis
thaliana]
Length = 410
Score = 114 bits (286), Expect = 1e-23
Identities = 56/76 (73%), Positives = 67/76 (88%), Gaps = 1/76 (1%)
Frame = +2
Query: 263 SKAARRFYNDNFRE-PERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPF 439
SKAARRFYN+NF+E P+RLSKVLAAAGVASRR SEE+IF G+V+VNG+ CNTPQTRVDP
Sbjct: 144 SKAARRFYNENFKEQPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCNTPQTRVDPS 203
Query: 440 KDSINIDGKSLPKKLP 487
+D I ++G +PKKLP
Sbjct: 204 RDIIYVNGNRIPKKLP 219
>ref|XP_002879786.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
lyrata] gi|297325625|gb|EFH56045.1| pseudouridine
synthase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 412
Score = 114 bits (286), Expect = 1e-23
Identities = 56/76 (73%), Positives = 67/76 (88%), Gaps = 1/76 (1%)
Frame = +2
Query: 263 SKAARRFYNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPF 439
SKAARRFYN+NF+EP +RLSKVLAAAGVASRR SEE+IF G+V+VNG+ CNTPQTRVDP
Sbjct: 146 SKAARRFYNENFKEPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCNTPQTRVDPS 205
Query: 440 KDSINIDGKSLPKKLP 487
+D I ++G +PKKLP
Sbjct: 206 RDIIYVNGNRIPKKLP 221
>gb|AAC28992.1| unknown protein [Arabidopsis thaliana]
Length = 303
Score = 114 bits (286), Expect = 1e-23
Identities = 56/76 (73%), Positives = 67/76 (88%), Gaps = 1/76 (1%)
Frame = +2
Query: 263 SKAARRFYNDNFRE-PERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPF 439
SKAARRFYN+NF+E P+RLSKVLAAAGVASRR SEE+IF G+V+VNG+ CNTPQTRVDP
Sbjct: 144 SKAARRFYNENFKEQPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCNTPQTRVDPS 203
Query: 440 KDSINIDGKSLPKKLP 487
+D I ++G +PKKLP
Sbjct: 204 RDIIYVNGNRIPKKLP 219
>gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabilis]
Length = 404
Score = 112 bits (281), Expect = 4e-23
Identities = 57/77 (74%), Positives = 65/77 (84%), Gaps = 1/77 (1%)
Frame = +2
Query: 260 HSKAARRFYNDNFREPE-RLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDP 436
+SKAARRFYN+NFRE + RLSKVLAAAGVASRR SEE+I GRV+VNG CNTPQTRVDP
Sbjct: 139 YSKAARRFYNENFRESDQRLSKVLAAAGVASRRNSEELILEGRVTVNGSVCNTPQTRVDP 198
Query: 437 FKDSINIDGKSLPKKLP 487
KD I ++G LPK+LP
Sbjct: 199 AKDVIYVNGNRLPKRLP 215
>ref|XP_001765369.1| predicted protein [Physcomitrella patens]
gi|162683422|gb|EDQ69832.1| predicted protein
[Physcomitrella patens]
Length = 560
Score = 110 bits (276), Expect = 1e-22
Identities = 56/77 (72%), Positives = 65/77 (84%), Gaps = 1/77 (1%)
Frame = +2
Query: 260 HSKAARRFYNDNFR-EPERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDP 436
+SKAARRFYN+ +R E ERLSKVLAAAGVASRRGSE++IFAGRV VNG C PQT V+P
Sbjct: 225 YSKAARRFYNETYRAECERLSKVLAAAGVASRRGSEDIIFAGRVKVNGKVCTVPQTPVNP 284
Query: 437 FKDSINIDGKSLPKKLP 487
KD+I +DG+SLPKK P
Sbjct: 285 LKDTIFLDGRSLPKKPP 301
>ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Populus trichocarpa]
gi|550332354|gb|EEE89362.2| hypothetical protein
POPTR_0008s03540g [Populus trichocarpa]
Length = 397
Score = 110 bits (275), Expect = 2e-22
Identities = 55/76 (72%), Positives = 65/76 (85%), Gaps = 1/76 (1%)
Frame = +2
Query: 263 SKAARRFYNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTPQTRVDPF 439
SKAARRFYN+NFR+ +RLSKVLAAAGVASRR SE +IF G+V+VNG CNTPQTRVDP
Sbjct: 131 SKAARRFYNENFRDQAQRLSKVLAAAGVASRRSSEALIFEGKVTVNGSVCNTPQTRVDPG 190
Query: 440 KDSINIDGKSLPKKLP 487
+D+I ++G LPKKLP
Sbjct: 191 RDAIYVNGNRLPKKLP 206
>gb|EOY18773.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
Length = 453
Score = 108 bits (270), Expect = 7e-22
Identities = 58/82 (70%), Positives = 65/82 (79%), Gaps = 7/82 (8%)
Frame = +2
Query: 263 SKAARRFYNDNFREP-ERLSKVLAAAGVASRRGSEEVIFAGRVSVNGVTCNTP------Q 421
SKAARRFYN+NF EP +RLSKVLAAAGVASRRGSEE+IF G+V+VNG CN P Q
Sbjct: 181 SKAARRFYNENFTEPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQASDNLQ 240
Query: 422 TRVDPFKDSINIDGKSLPKKLP 487
TRVDP KD I ++G LPKKLP
Sbjct: 241 TRVDPAKDIIYVNGSRLPKKLP 262