BLASTX nr result

ID: Ephedra27_contig00013632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00013632
         (367 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX19931.1| viral replicase [Nandina mosaic virus]                 245   4e-63
gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a...   241   6e-62
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ...   241   6e-62
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ...   241   6e-62
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ...   241   6e-62
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ...   241   6e-62
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ...   241   6e-62
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ...   241   9e-62
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1...   240   2e-61
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ...   238   5e-61
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi...   216   2e-54
gb|ACB59265.1| replicase [Tulip virus X]                              216   2e-54
emb|CAD79453.1| putative RNA-directed RNA polymerase [Hydrangea ...   191   1e-46
emb|CAB91087.1| RNA dependent RNA polymerase (RdRP) [Hydrangea r...   191   1e-46
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5...   191   1e-46
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]             189   3e-46
ref|NP_077079.1| replicase [Clover yellow mosaic virus]               180   2e-43
ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|A...   179   3e-43
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo...   175   6e-42
gb|AEP95743.1| RNA-dependent RNA polymerase [Cassava common mosa...   175   6e-42

>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
          Length = 1368

 Score =  245 bits (626), Expect = 4e-63
 Identities = 115/122 (94%), Positives = 120/122 (98%)
 Frame = +1

Query: 1    DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
            DILW NYHKAM LPKEQP+FSE+LWTRCAEEVQNTYLKKS++Q+KGGERRQSPDFHEHQI
Sbjct: 1009 DILWTNYHKAMNLPKEQPDFSEELWTRCAEEVQNTYLKKSLNQLKGGERRQSPDFHEHQI 1068

Query: 181  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
            LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC
Sbjct: 1069 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 1128

Query: 361  EK 366
            EK
Sbjct: 1129 EK 1130


>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
           virus]
          Length = 711

 Score =  241 bits (616), Expect = 6e-62
 Identities = 114/122 (93%), Positives = 118/122 (96%)
 Frame = +1

Query: 1   DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
           DILW NY KAMKLP EQP+FSEDLWTRCAEEVQNTYLKKS++QIKGG+RRQSPDFHEHQI
Sbjct: 352 DILWENYRKAMKLPNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQSPDFHEHQI 411

Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
           LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINC
Sbjct: 412 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINC 471

Query: 361 EK 366
           EK
Sbjct: 472 EK 473


>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  241 bits (616), Expect = 6e-62
 Identities = 115/122 (94%), Positives = 117/122 (95%)
 Frame = +1

Query: 1    DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
            DILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQI
Sbjct: 1021 DILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQI 1080

Query: 181  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
            LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINC
Sbjct: 1081 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINC 1140

Query: 361  EK 366
            EK
Sbjct: 1141 EK 1142


>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  241 bits (616), Expect = 6e-62
 Identities = 115/122 (94%), Positives = 117/122 (95%)
 Frame = +1

Query: 1    DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
            DILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQI
Sbjct: 1021 DILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQI 1080

Query: 181  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
            LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINC
Sbjct: 1081 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINC 1140

Query: 361  EK 366
            EK
Sbjct: 1141 EK 1142


>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  241 bits (616), Expect = 6e-62
 Identities = 115/122 (94%), Positives = 117/122 (95%)
 Frame = +1

Query: 1    DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
            DILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQI
Sbjct: 1021 DILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQI 1080

Query: 181  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
            LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINC
Sbjct: 1081 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINC 1140

Query: 361  EK 366
            EK
Sbjct: 1141 EK 1142


>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  241 bits (616), Expect = 6e-62
 Identities = 115/122 (94%), Positives = 117/122 (95%)
 Frame = +1

Query: 1    DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
            DILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQI
Sbjct: 1021 DILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQI 1080

Query: 181  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
            LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINC
Sbjct: 1081 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINC 1140

Query: 361  EK 366
            EK
Sbjct: 1141 EK 1142


>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  241 bits (616), Expect = 6e-62
 Identities = 115/122 (94%), Positives = 117/122 (95%)
 Frame = +1

Query: 1    DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
            DILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQI
Sbjct: 1021 DILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQI 1080

Query: 181  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
            LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINC
Sbjct: 1081 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINC 1140

Query: 361  EK 366
            EK
Sbjct: 1141 EK 1142


>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  241 bits (614), Expect = 9e-62
 Identities = 114/122 (93%), Positives = 118/122 (96%)
 Frame = +1

Query: 1    DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
            DILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEHQI
Sbjct: 1021 DILWENYRKAMKLPNEQPDFSEDLWIRCAEEVQNTYLKKSVAQIKGGERRQSPDFHEHQI 1080

Query: 181  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
            LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFR+ALSPNNIMINC
Sbjct: 1081 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFREALSPNNIMINC 1140

Query: 361  EK 366
            EK
Sbjct: 1141 EK 1142


>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
            gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
            replication protein; AltName: Full=156 kDa protein;
            AltName: Full=ORF1 protein; Includes: RecName:
            Full=RNA-directed RNA polymerase; Includes: RecName:
            Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
            [Plantago asiatica mosaic virus]
          Length = 1385

 Score =  240 bits (612), Expect = 2e-61
 Identities = 112/122 (91%), Positives = 119/122 (97%)
 Frame = +1

Query: 1    DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
            DILW NYH+AM LPKEQP+FSEDLW RCAEEVQNTYLKK+++Q+KGGERRQSPDFHEHQI
Sbjct: 1026 DILWVNYHRAMGLPKEQPDFSEDLWNRCAEEVQNTYLKKTMAQLKGGERRQSPDFHEHQI 1085

Query: 181  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
            LIFLKSQWVKKMEKLGAK+IKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC
Sbjct: 1086 LIFLKSQWVKKMEKLGAKEIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 1145

Query: 361  EK 366
            EK
Sbjct: 1146 EK 1147


>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  238 bits (608), Expect = 5e-61
 Identities = 113/122 (92%), Positives = 116/122 (95%)
 Frame = +1

Query: 1    DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
            DILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEH I
Sbjct: 1021 DILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHHI 1080

Query: 181  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
            LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINC
Sbjct: 1081 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINC 1140

Query: 361  EK 366
            E+
Sbjct: 1141 ER 1142


>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
            gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
            [Tulip virus X]
          Length = 1361

 Score =  216 bits (551), Expect = 2e-54
 Identities = 102/122 (83%), Positives = 111/122 (90%)
 Frame = +1

Query: 1    DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
            D+LW NYH+AMKLPKEQP+FS +LW RCA EVQ TYL KS+ QIKGGERRQSPDF E++I
Sbjct: 1002 DVLWENYHRAMKLPKEQPDFSPELWERCAAEVQQTYLSKSLQQIKGGERRQSPDFPENKI 1061

Query: 181  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
            LIFLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR+RDAL PNNIMINC
Sbjct: 1062 LIFLKSQWVKKMEKLGAPKIKPGQTIASFQQAAVMLYGTMARYMRRYRDALGPNNIMINC 1121

Query: 361  EK 366
            E+
Sbjct: 1122 ER 1123


>gb|ACB59265.1| replicase [Tulip virus X]
          Length = 235

 Score =  216 bits (551), Expect = 2e-54
 Identities = 102/122 (83%), Positives = 111/122 (90%)
 Frame = +1

Query: 1   DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
           D+LW NYH+AMKLPKEQP+FS +LW RCA EVQ TYL KS+ QIKGGERRQSPDF E++I
Sbjct: 33  DVLWENYHRAMKLPKEQPDFSPELWERCAAEVQQTYLSKSLQQIKGGERRQSPDFPENKI 92

Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
           LIFLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR+RDAL PNNIMINC
Sbjct: 93  LIFLKSQWVKKMEKLGAPKIKPGQTIASFQQAAVMLYGTMARYMRRYRDALGPNNIMINC 152

Query: 361 EK 366
           E+
Sbjct: 153 ER 154


>emb|CAD79453.1| putative RNA-directed RNA polymerase [Hydrangea ringspot virus]
          Length = 219

 Score =  191 bits (484), Expect = 1e-46
 Identities = 92/121 (76%), Positives = 101/121 (83%)
 Frame = +1

Query: 1   DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
           DILW +Y KAM LP+E   FSEDLW   A EVQNTYL K ++ +K GERRQSPDF +HQI
Sbjct: 38  DILWLHYKKAMTLPEEPLPFSEDLWRLSAAEVQNTYLSKPMNMLKNGERRQSPDFEKHQI 97

Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
           L+FLKSQWVKKMEKLG  KIK GQTIASFQQHAVMLYGTMARYMRRFR+AL PN+I INC
Sbjct: 98  LLFLKSQWVKKMEKLGGPKIKAGQTIASFQQHAVMLYGTMARYMRRFREALGPNHIKINC 157

Query: 361 E 363
           E
Sbjct: 158 E 158


>emb|CAB91087.1| RNA dependent RNA polymerase (RdRP) [Hydrangea ringspot virus]
          Length = 195

 Score =  191 bits (484), Expect = 1e-46
 Identities = 92/121 (76%), Positives = 101/121 (83%)
 Frame = +1

Query: 1   DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
           DILW +Y KAM LP+E   FSEDLW   A EVQNTYL K ++ +K GERRQSPDF +HQI
Sbjct: 38  DILWLHYKKAMTLPEEPLPFSEDLWRLSAAEVQNTYLSKPMNMLKNGERRQSPDFEKHQI 97

Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
           L+FLKSQWVKKMEKLG  KIK GQTIASFQQHAVMLYGTMARYMRRFR+AL PN+I INC
Sbjct: 98  LLFLKSQWVKKMEKLGGPKIKAGQTIASFQQHAVMLYGTMARYMRRFREALGPNHIKINC 157

Query: 361 E 363
           E
Sbjct: 158 E 158


>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|56792005|gb|AAW30448.1|
            viral replicase [Hydrangea ringspot virus]
          Length = 1386

 Score =  191 bits (484), Expect = 1e-46
 Identities = 92/121 (76%), Positives = 101/121 (83%)
 Frame = +1

Query: 1    DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
            DILW +Y KAM LP+E   FSEDLW   A EVQNTYL K ++ +K GERRQSPDF +HQI
Sbjct: 1028 DILWLHYKKAMTLPEEPLPFSEDLWRLSAAEVQNTYLSKPMNMLKNGERRQSPDFEKHQI 1087

Query: 181  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
            L+FLKSQWVKKMEKLG  KIK GQTIASFQQHAVMLYGTMARYMRRFR+AL PN+I INC
Sbjct: 1088 LLFLKSQWVKKMEKLGGPKIKAGQTIASFQQHAVMLYGTMARYMRRFREALGPNHIKINC 1147

Query: 361  E 363
            E
Sbjct: 1148 E 1148


>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
          Length = 1386

 Score =  189 bits (480), Expect = 3e-46
 Identities = 91/121 (75%), Positives = 100/121 (82%)
 Frame = +1

Query: 1    DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
            DILW +Y KAM LP+E   FSEDLW   A EVQNTYL K ++ +K GERRQSPDF +HQI
Sbjct: 1028 DILWLHYKKAMTLPEEPLPFSEDLWRLSAAEVQNTYLSKPMNMLKNGERRQSPDFEKHQI 1087

Query: 181  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
            L+FLKSQWVKKMEKLG  KIK GQTIASFQQHAVMLYGTMARYMRRFR+ L PN+I INC
Sbjct: 1088 LLFLKSQWVKKMEKLGGPKIKAGQTIASFQQHAVMLYGTMARYMRRFREVLGPNHIKINC 1147

Query: 361  E 363
            E
Sbjct: 1148 E 1148


>ref|NP_077079.1| replicase [Clover yellow mosaic virus]
          Length = 1670

 Score =  180 bits (457), Expect = 2e-43
 Identities = 85/122 (69%), Positives = 96/122 (78%)
 Frame = +1

Query: 1    DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
            D+LW NY +AMKLP +  EFS +LW  CAEEVQ TYL K ++ IK GE RQSPDF +H I
Sbjct: 1317 DVLWLNYKRAMKLPDKPIEFSHELWHACAEEVQKTYLSKPLNMIKNGENRQSPDFDKHTI 1376

Query: 181  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
             +FLKSQWVKK+EKLGA KIKPGQTIASFQQ  VMLYGTMARYMRR R A  P NI +NC
Sbjct: 1377 SLFLKSQWVKKLEKLGAPKIKPGQTIASFQQATVMLYGTMARYMRRIRQAFQPPNIQLNC 1436

Query: 361  EK 366
            E+
Sbjct: 1437 EQ 1438


>ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|ACN58194.1| replicase
            [Allium virus X]
          Length = 1701

 Score =  179 bits (454), Expect = 3e-43
 Identities = 86/122 (70%), Positives = 98/122 (80%)
 Frame = +1

Query: 1    DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
            D+L+ +YH+AMKLP +   F EDLW  CA+EVQ TYL K I+ +K GE RQSPDF ++ I
Sbjct: 1349 DVLFEHYHQAMKLPDKPIPFMEDLWVACAQEVQGTYLSKPINMLKNGEYRQSPDFDKNTI 1408

Query: 181  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
             +FLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR R+A  P  IMINC
Sbjct: 1409 ALFLKSQWVKKMEKLGAPKIKPGQTIASFQQSAVMLYGTMARYMRRMREAFQPPEIMINC 1468

Query: 361  EK 366
            EK
Sbjct: 1469 EK 1470


>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
            gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
            RNA polymerase [Cassava common mosaic virus]
            gi|1587823|prf||2207297A ORF 1
          Length = 1449

 Score =  175 bits (443), Expect = 6e-42
 Identities = 87/122 (71%), Positives = 96/122 (78%)
 Frame = +1

Query: 1    DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
            DILW NY +AM LP++   F E+LW   A E+Q+TYL KS   +K GERRQSPDF E  I
Sbjct: 1096 DILWLNYKRAMHLPEDPIPF-EELWELAAREIQHTYLSKSTQMLKNGERRQSPDFGEKDI 1154

Query: 181  LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
            LIFLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR RD   P +IMINC
Sbjct: 1155 LIFLKSQWVKKMEKLGAPKIKPGQTIASFQQSAVMLYGTMARYMRRIRDIYMPEHIMINC 1214

Query: 361  EK 366
            E+
Sbjct: 1215 ER 1216


>gb|AEP95743.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
          Length = 245

 Score =  175 bits (443), Expect = 6e-42
 Identities = 87/122 (71%), Positives = 96/122 (78%)
 Frame = +1

Query: 1   DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
           DILW NY +AM LP++   F E+LW   A E+Q+TYL KS   +K GERRQSPDF E  I
Sbjct: 38  DILWLNYKRAMHLPEDPIPF-EELWELAAREIQHTYLSKSTQMLKNGERRQSPDFGEKDI 96

Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
           LIFLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR RD   P +IMINC
Sbjct: 97  LIFLKSQWVKKMEKLGAPKIKPGQTIASFQQSAVMLYGTMARYMRRIRDIYMPEHIMINC 156

Query: 361 EK 366
           E+
Sbjct: 157 ER 158


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