BLASTX nr result
ID: Ephedra27_contig00013632
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00013632
(367 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX19931.1| viral replicase [Nandina mosaic virus] 245 4e-63
gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a... 241 6e-62
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ... 241 6e-62
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ... 241 6e-62
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ... 241 6e-62
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ... 241 6e-62
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ... 241 6e-62
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 241 9e-62
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1... 240 2e-61
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ... 238 5e-61
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi... 216 2e-54
gb|ACB59265.1| replicase [Tulip virus X] 216 2e-54
emb|CAD79453.1| putative RNA-directed RNA polymerase [Hydrangea ... 191 1e-46
emb|CAB91087.1| RNA dependent RNA polymerase (RdRP) [Hydrangea r... 191 1e-46
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5... 191 1e-46
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus] 189 3e-46
ref|NP_077079.1| replicase [Clover yellow mosaic virus] 180 2e-43
ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|A... 179 3e-43
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo... 175 6e-42
gb|AEP95743.1| RNA-dependent RNA polymerase [Cassava common mosa... 175 6e-42
>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
Length = 1368
Score = 245 bits (626), Expect = 4e-63
Identities = 115/122 (94%), Positives = 120/122 (98%)
Frame = +1
Query: 1 DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
DILW NYHKAM LPKEQP+FSE+LWTRCAEEVQNTYLKKS++Q+KGGERRQSPDFHEHQI
Sbjct: 1009 DILWTNYHKAMNLPKEQPDFSEELWTRCAEEVQNTYLKKSLNQLKGGERRQSPDFHEHQI 1068
Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC
Sbjct: 1069 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 1128
Query: 361 EK 366
EK
Sbjct: 1129 EK 1130
>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 711
Score = 241 bits (616), Expect = 6e-62
Identities = 114/122 (93%), Positives = 118/122 (96%)
Frame = +1
Query: 1 DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
DILW NY KAMKLP EQP+FSEDLWTRCAEEVQNTYLKKS++QIKGG+RRQSPDFHEHQI
Sbjct: 352 DILWENYRKAMKLPNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQSPDFHEHQI 411
Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINC
Sbjct: 412 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINC 471
Query: 361 EK 366
EK
Sbjct: 472 EK 473
>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 241 bits (616), Expect = 6e-62
Identities = 115/122 (94%), Positives = 117/122 (95%)
Frame = +1
Query: 1 DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
DILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQI
Sbjct: 1021 DILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQI 1080
Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINC
Sbjct: 1081 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINC 1140
Query: 361 EK 366
EK
Sbjct: 1141 EK 1142
>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 241 bits (616), Expect = 6e-62
Identities = 115/122 (94%), Positives = 117/122 (95%)
Frame = +1
Query: 1 DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
DILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQI
Sbjct: 1021 DILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQI 1080
Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINC
Sbjct: 1081 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINC 1140
Query: 361 EK 366
EK
Sbjct: 1141 EK 1142
>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 241 bits (616), Expect = 6e-62
Identities = 115/122 (94%), Positives = 117/122 (95%)
Frame = +1
Query: 1 DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
DILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQI
Sbjct: 1021 DILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQI 1080
Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINC
Sbjct: 1081 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINC 1140
Query: 361 EK 366
EK
Sbjct: 1141 EK 1142
>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 241 bits (616), Expect = 6e-62
Identities = 115/122 (94%), Positives = 117/122 (95%)
Frame = +1
Query: 1 DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
DILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQI
Sbjct: 1021 DILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQI 1080
Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINC
Sbjct: 1081 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINC 1140
Query: 361 EK 366
EK
Sbjct: 1141 EK 1142
>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 241 bits (616), Expect = 6e-62
Identities = 115/122 (94%), Positives = 117/122 (95%)
Frame = +1
Query: 1 DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
DILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEHQI
Sbjct: 1021 DILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQI 1080
Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINC
Sbjct: 1081 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINC 1140
Query: 361 EK 366
EK
Sbjct: 1141 EK 1142
>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 241 bits (614), Expect = 9e-62
Identities = 114/122 (93%), Positives = 118/122 (96%)
Frame = +1
Query: 1 DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
DILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEHQI
Sbjct: 1021 DILWENYRKAMKLPNEQPDFSEDLWIRCAEEVQNTYLKKSVAQIKGGERRQSPDFHEHQI 1080
Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFR+ALSPNNIMINC
Sbjct: 1081 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFREALSPNNIMINC 1140
Query: 361 EK 366
EK
Sbjct: 1141 EK 1142
>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
[Plantago asiatica mosaic virus]
Length = 1385
Score = 240 bits (612), Expect = 2e-61
Identities = 112/122 (91%), Positives = 119/122 (97%)
Frame = +1
Query: 1 DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
DILW NYH+AM LPKEQP+FSEDLW RCAEEVQNTYLKK+++Q+KGGERRQSPDFHEHQI
Sbjct: 1026 DILWVNYHRAMGLPKEQPDFSEDLWNRCAEEVQNTYLKKTMAQLKGGERRQSPDFHEHQI 1085
Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
LIFLKSQWVKKMEKLGAK+IKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC
Sbjct: 1086 LIFLKSQWVKKMEKLGAKEIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 1145
Query: 361 EK 366
EK
Sbjct: 1146 EK 1147
>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 238 bits (608), Expect = 5e-61
Identities = 113/122 (92%), Positives = 116/122 (95%)
Frame = +1
Query: 1 DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
DILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+SQIKGGERRQSPDFHEH I
Sbjct: 1021 DILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHHI 1080
Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINC
Sbjct: 1081 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINC 1140
Query: 361 EK 366
E+
Sbjct: 1141 ER 1142
>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
[Tulip virus X]
Length = 1361
Score = 216 bits (551), Expect = 2e-54
Identities = 102/122 (83%), Positives = 111/122 (90%)
Frame = +1
Query: 1 DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
D+LW NYH+AMKLPKEQP+FS +LW RCA EVQ TYL KS+ QIKGGERRQSPDF E++I
Sbjct: 1002 DVLWENYHRAMKLPKEQPDFSPELWERCAAEVQQTYLSKSLQQIKGGERRQSPDFPENKI 1061
Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
LIFLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR+RDAL PNNIMINC
Sbjct: 1062 LIFLKSQWVKKMEKLGAPKIKPGQTIASFQQAAVMLYGTMARYMRRYRDALGPNNIMINC 1121
Query: 361 EK 366
E+
Sbjct: 1122 ER 1123
>gb|ACB59265.1| replicase [Tulip virus X]
Length = 235
Score = 216 bits (551), Expect = 2e-54
Identities = 102/122 (83%), Positives = 111/122 (90%)
Frame = +1
Query: 1 DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
D+LW NYH+AMKLPKEQP+FS +LW RCA EVQ TYL KS+ QIKGGERRQSPDF E++I
Sbjct: 33 DVLWENYHRAMKLPKEQPDFSPELWERCAAEVQQTYLSKSLQQIKGGERRQSPDFPENKI 92
Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
LIFLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR+RDAL PNNIMINC
Sbjct: 93 LIFLKSQWVKKMEKLGAPKIKPGQTIASFQQAAVMLYGTMARYMRRYRDALGPNNIMINC 152
Query: 361 EK 366
E+
Sbjct: 153 ER 154
>emb|CAD79453.1| putative RNA-directed RNA polymerase [Hydrangea ringspot virus]
Length = 219
Score = 191 bits (484), Expect = 1e-46
Identities = 92/121 (76%), Positives = 101/121 (83%)
Frame = +1
Query: 1 DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
DILW +Y KAM LP+E FSEDLW A EVQNTYL K ++ +K GERRQSPDF +HQI
Sbjct: 38 DILWLHYKKAMTLPEEPLPFSEDLWRLSAAEVQNTYLSKPMNMLKNGERRQSPDFEKHQI 97
Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
L+FLKSQWVKKMEKLG KIK GQTIASFQQHAVMLYGTMARYMRRFR+AL PN+I INC
Sbjct: 98 LLFLKSQWVKKMEKLGGPKIKAGQTIASFQQHAVMLYGTMARYMRRFREALGPNHIKINC 157
Query: 361 E 363
E
Sbjct: 158 E 158
>emb|CAB91087.1| RNA dependent RNA polymerase (RdRP) [Hydrangea ringspot virus]
Length = 195
Score = 191 bits (484), Expect = 1e-46
Identities = 92/121 (76%), Positives = 101/121 (83%)
Frame = +1
Query: 1 DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
DILW +Y KAM LP+E FSEDLW A EVQNTYL K ++ +K GERRQSPDF +HQI
Sbjct: 38 DILWLHYKKAMTLPEEPLPFSEDLWRLSAAEVQNTYLSKPMNMLKNGERRQSPDFEKHQI 97
Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
L+FLKSQWVKKMEKLG KIK GQTIASFQQHAVMLYGTMARYMRRFR+AL PN+I INC
Sbjct: 98 LLFLKSQWVKKMEKLGGPKIKAGQTIASFQQHAVMLYGTMARYMRRFREALGPNHIKINC 157
Query: 361 E 363
E
Sbjct: 158 E 158
>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|56792005|gb|AAW30448.1|
viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 191 bits (484), Expect = 1e-46
Identities = 92/121 (76%), Positives = 101/121 (83%)
Frame = +1
Query: 1 DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
DILW +Y KAM LP+E FSEDLW A EVQNTYL K ++ +K GERRQSPDF +HQI
Sbjct: 1028 DILWLHYKKAMTLPEEPLPFSEDLWRLSAAEVQNTYLSKPMNMLKNGERRQSPDFEKHQI 1087
Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
L+FLKSQWVKKMEKLG KIK GQTIASFQQHAVMLYGTMARYMRRFR+AL PN+I INC
Sbjct: 1088 LLFLKSQWVKKMEKLGGPKIKAGQTIASFQQHAVMLYGTMARYMRRFREALGPNHIKINC 1147
Query: 361 E 363
E
Sbjct: 1148 E 1148
>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 189 bits (480), Expect = 3e-46
Identities = 91/121 (75%), Positives = 100/121 (82%)
Frame = +1
Query: 1 DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
DILW +Y KAM LP+E FSEDLW A EVQNTYL K ++ +K GERRQSPDF +HQI
Sbjct: 1028 DILWLHYKKAMTLPEEPLPFSEDLWRLSAAEVQNTYLSKPMNMLKNGERRQSPDFEKHQI 1087
Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
L+FLKSQWVKKMEKLG KIK GQTIASFQQHAVMLYGTMARYMRRFR+ L PN+I INC
Sbjct: 1088 LLFLKSQWVKKMEKLGGPKIKAGQTIASFQQHAVMLYGTMARYMRRFREVLGPNHIKINC 1147
Query: 361 E 363
E
Sbjct: 1148 E 1148
>ref|NP_077079.1| replicase [Clover yellow mosaic virus]
Length = 1670
Score = 180 bits (457), Expect = 2e-43
Identities = 85/122 (69%), Positives = 96/122 (78%)
Frame = +1
Query: 1 DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
D+LW NY +AMKLP + EFS +LW CAEEVQ TYL K ++ IK GE RQSPDF +H I
Sbjct: 1317 DVLWLNYKRAMKLPDKPIEFSHELWHACAEEVQKTYLSKPLNMIKNGENRQSPDFDKHTI 1376
Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
+FLKSQWVKK+EKLGA KIKPGQTIASFQQ VMLYGTMARYMRR R A P NI +NC
Sbjct: 1377 SLFLKSQWVKKLEKLGAPKIKPGQTIASFQQATVMLYGTMARYMRRIRQAFQPPNIQLNC 1436
Query: 361 EK 366
E+
Sbjct: 1437 EQ 1438
>ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|ACN58194.1| replicase
[Allium virus X]
Length = 1701
Score = 179 bits (454), Expect = 3e-43
Identities = 86/122 (70%), Positives = 98/122 (80%)
Frame = +1
Query: 1 DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
D+L+ +YH+AMKLP + F EDLW CA+EVQ TYL K I+ +K GE RQSPDF ++ I
Sbjct: 1349 DVLFEHYHQAMKLPDKPIPFMEDLWVACAQEVQGTYLSKPINMLKNGEYRQSPDFDKNTI 1408
Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
+FLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR R+A P IMINC
Sbjct: 1409 ALFLKSQWVKKMEKLGAPKIKPGQTIASFQQSAVMLYGTMARYMRRMREAFQPPEIMINC 1468
Query: 361 EK 366
EK
Sbjct: 1469 EK 1470
>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
RNA polymerase [Cassava common mosaic virus]
gi|1587823|prf||2207297A ORF 1
Length = 1449
Score = 175 bits (443), Expect = 6e-42
Identities = 87/122 (71%), Positives = 96/122 (78%)
Frame = +1
Query: 1 DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
DILW NY +AM LP++ F E+LW A E+Q+TYL KS +K GERRQSPDF E I
Sbjct: 1096 DILWLNYKRAMHLPEDPIPF-EELWELAAREIQHTYLSKSTQMLKNGERRQSPDFGEKDI 1154
Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
LIFLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR RD P +IMINC
Sbjct: 1155 LIFLKSQWVKKMEKLGAPKIKPGQTIASFQQSAVMLYGTMARYMRRIRDIYMPEHIMINC 1214
Query: 361 EK 366
E+
Sbjct: 1215 ER 1216
>gb|AEP95743.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
Length = 245
Score = 175 bits (443), Expect = 6e-42
Identities = 87/122 (71%), Positives = 96/122 (78%)
Frame = +1
Query: 1 DILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSISQIKGGERRQSPDFHEHQI 180
DILW NY +AM LP++ F E+LW A E+Q+TYL KS +K GERRQSPDF E I
Sbjct: 38 DILWLNYKRAMHLPEDPIPF-EELWELAAREIQHTYLSKSTQMLKNGERRQSPDFGEKDI 96
Query: 181 LIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINC 360
LIFLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYMRR RD P +IMINC
Sbjct: 97 LIFLKSQWVKKMEKLGAPKIKPGQTIASFQQSAVMLYGTMARYMRRIRDIYMPEHIMINC 156
Query: 361 EK 366
E+
Sbjct: 157 ER 158