BLASTX nr result
ID: Ephedra27_contig00013610
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00013610
(1142 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK26180.1| unknown [Picea sitchensis] 286 1e-74
gb|ADP89574.1| PsbP domain protein 1 [Gossypium hirsutum] 257 7e-66
ref|XP_004230618.1| PREDICTED: psbP domain-containing protein 1,... 255 2e-65
ref|XP_006351709.1| PREDICTED: psbP domain-containing protein 1,... 254 5e-65
ref|XP_006382362.1| hypothetical protein POPTR_0005s01430g [Popu... 250 9e-64
ref|XP_002870234.1| photosystem II reaction center PsbP family p... 250 9e-64
ref|XP_002330072.1| predicted protein [Populus trichocarpa] 249 1e-63
ref|XP_002512537.1| Thylakoid lumenal 21.5 kDa protein, chloropl... 249 1e-63
gb|ESW35305.1| hypothetical protein PHAVU_001G224100g [Phaseolus... 249 2e-63
ref|NP_001067041.1| Os12g0564400 [Oryza sativa Japonica Group] g... 248 3e-63
gb|EOY11706.1| Photosystem II reaction center PsbP family protei... 248 4e-63
gb|EOY11705.1| Photosystem II reaction center PsbP family protei... 248 4e-63
ref|NP_567468.1| photosystem II reaction center PsbP family prot... 248 4e-63
ref|XP_002442334.1| hypothetical protein SORBIDRAFT_08g018390 [S... 248 4e-63
gb|AAM61572.1| unknown [Arabidopsis thaliana] 246 9e-63
ref|XP_006285869.1| hypothetical protein CARUB_v10007363mg [Caps... 246 1e-62
ref|XP_002319475.1| hypothetical protein POPTR_0013s00790g [Popu... 246 1e-62
ref|NP_001031646.1| photosystem II reaction center PsbP family p... 246 2e-62
ref|XP_006414492.1| hypothetical protein EUTSA_v10025982mg [Eutr... 245 2e-62
ref|XP_004962751.1| PREDICTED: psbP domain-containing protein 1,... 245 3e-62
>gb|ABK26180.1| unknown [Picea sitchensis]
Length = 270
Score = 286 bits (732), Expect = 1e-74
Identities = 144/264 (54%), Positives = 191/264 (72%), Gaps = 3/264 (1%)
Frame = -3
Query: 1047 AIVQVRWQLSSLGLSGNVRRKASVPSYSCRCSNNNASVGNMQQDSGQS-FCSFPRRFLLG 871
A+ Q+ W S + + + + S +C CS +++++ + ++S Q +F RR LL
Sbjct: 6 ALWQLPWVRSDVTCLRKIPAISRLSSSTCSCSGDSSALTSAHKESSQPPLTTFSRRILLY 65
Query: 870 CSLSTILTFPPVMDNSVSAKTY--YKEYTDLFDGYTFQYPENWMQVRGANADIFFRDPIN 697
+ +T + AK YKEY D FDGYTF+YP NW+QVRGANADIFFRDPIN
Sbjct: 66 YTFTTAFASHVAFNELALAKPAFRYKEYFDNFDGYTFKYPRNWIQVRGANADIFFRDPIN 125
Query: 696 IDXXXXXXXXXXXXXXXXXXEDLGPPEAAAKRILQQYLTEFMSTRLGVQRESSILSTASR 517
+D +DLGPPEAA +++L+QYLTEFMSTRLGV+RES+ILST+SR
Sbjct: 126 LDENVSVDITSPSSSKFNSIKDLGPPEAAGEKVLRQYLTEFMSTRLGVRRESNILSTSSR 185
Query: 516 VADDGKLYYDIEVNVKSFANNNQLAIMPQDRVQLLEWNRRYLTVLGVENNCLYQMRLQIP 337
VADDGK+YYDI+VNVKSFAN+N++A+MPQDR+ LEW+RRYL+VLGVENNCLY++RLQ P
Sbjct: 186 VADDGKMYYDIQVNVKSFANSNEMAVMPQDRIPQLEWDRRYLSVLGVENNCLYELRLQTP 245
Query: 336 ERVFAQEENDLRKVMNSFRVMSIS 265
E++FAQEENDLR+VM+SFRV+ +S
Sbjct: 246 EKIFAQEENDLRQVMDSFRVVKVS 269
>gb|ADP89574.1| PsbP domain protein 1 [Gossypium hirsutum]
Length = 257
Score = 257 bits (656), Expect = 7e-66
Identities = 136/240 (56%), Positives = 167/240 (69%), Gaps = 3/240 (1%)
Frame = -3
Query: 975 PSYSCRCSNNNASVGNMQQDSGQSFCSFPRRFLLGCSLST-ILTFPPVMDNSVSAKTY-- 805
PS SC C+ N S S PRR + LST I + + DN A+
Sbjct: 26 PSASCLCTRRNQSF---------QASSIPRRNAMALILSTYIFSEVGLHDNIAFAEPSVG 76
Query: 804 YKEYTDLFDGYTFQYPENWMQVRGANADIFFRDPINIDXXXXXXXXXXXXXXXXXXEDLG 625
++EY D FDGY+ +YP+NW+QVRGA ADIFFRDP +D EDLG
Sbjct: 77 FREYIDTFDGYSLKYPQNWIQVRGAGADIFFRDPYVLDENLSVELSSPSSSRYKTVEDLG 136
Query: 624 PPEAAAKRILQQYLTEFMSTRLGVQRESSILSTASRVADDGKLYYDIEVNVKSFANNNQL 445
PPE A K++L+QYLTEFMSTRLGV+RES+ILST+SRVADDGKLYY +EVN+KS+AN N+L
Sbjct: 137 PPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRVADDGKLYYQVEVNIKSYANTNEL 196
Query: 444 AIMPQDRVQLLEWNRRYLTVLGVENNCLYQMRLQIPERVFAQEENDLRKVMNSFRVMSIS 265
A+MPQDRV LEWNRRYL+VLGVENN LY++RLQ PE VF +EENDLR+VM+SFRV ++
Sbjct: 197 AVMPQDRVPRLEWNRRYLSVLGVENNRLYELRLQTPESVFVEEENDLRQVMDSFRVNKVA 256
>ref|XP_004230618.1| PREDICTED: psbP domain-containing protein 1, chloroplastic-like
[Solanum lycopersicum]
Length = 287
Score = 255 bits (652), Expect = 2e-65
Identities = 124/210 (59%), Positives = 158/210 (75%), Gaps = 1/210 (0%)
Frame = -3
Query: 891 PRRFLLGCSLST-ILTFPPVMDNSVSAKTYYKEYTDLFDGYTFQYPENWMQVRGANADIF 715
PRR + LS+ +L+ + + + ++EY D FDGY+F YP NW+QVRGA ADIF
Sbjct: 77 PRRKAMALILSSFVLSNYELPKVAYAQSVEFREYIDTFDGYSFMYPRNWIQVRGAGADIF 136
Query: 714 FRDPINIDXXXXXXXXXXXXXXXXXXEDLGPPEAAAKRILQQYLTEFMSTRLGVQRESSI 535
FRDP+ +D +DLGPPE A K +L+QYLTEFMSTRLGV+RESS+
Sbjct: 137 FRDPLVLDENLSVEISSPSSSKYKSVKDLGPPEEAGKGVLKQYLTEFMSTRLGVRRESSV 196
Query: 534 LSTASRVADDGKLYYDIEVNVKSFANNNQLAIMPQDRVQLLEWNRRYLTVLGVENNCLYQ 355
LST+SRVADDGKLYYD+EVN+KS+ANNN+LA+MPQDRV LEW+RRYL+VLGVENNCLY+
Sbjct: 197 LSTSSRVADDGKLYYDVEVNIKSYANNNELAVMPQDRVARLEWDRRYLSVLGVENNCLYE 256
Query: 354 MRLQIPERVFAQEENDLRKVMNSFRVMSIS 265
+R+Q PE+VF QEE+D+R +MNSFR I+
Sbjct: 257 LRIQTPEKVFVQEESDIRAIMNSFRANKIA 286
>ref|XP_006351709.1| PREDICTED: psbP domain-containing protein 1, chloroplastic-like
[Solanum tuberosum]
Length = 287
Score = 254 bits (649), Expect = 5e-65
Identities = 118/180 (65%), Positives = 145/180 (80%)
Frame = -3
Query: 804 YKEYTDLFDGYTFQYPENWMQVRGANADIFFRDPINIDXXXXXXXXXXXXXXXXXXEDLG 625
++EY D FDGY+F YP NW+QVRGA ADIFFRDP+ +D +DLG
Sbjct: 107 FREYIDTFDGYSFMYPRNWIQVRGAGADIFFRDPLVLDENLSVEISSPSSSKYKSVKDLG 166
Query: 624 PPEAAAKRILQQYLTEFMSTRLGVQRESSILSTASRVADDGKLYYDIEVNVKSFANNNQL 445
PPE A K +L+QYLTEFMSTRLGV+RESS+LST+SRVADDGKLYYD+EVN+KS+ANNN+L
Sbjct: 167 PPEEAGKGVLKQYLTEFMSTRLGVRRESSVLSTSSRVADDGKLYYDVEVNIKSYANNNEL 226
Query: 444 AIMPQDRVQLLEWNRRYLTVLGVENNCLYQMRLQIPERVFAQEENDLRKVMNSFRVMSIS 265
A+MPQDRV LEW+RRYL+VLGVENNCLY++R+Q PE+VF QEE+D+R +MNSFR I+
Sbjct: 227 AVMPQDRVARLEWDRRYLSVLGVENNCLYELRIQTPEKVFVQEESDIRAIMNSFRANKIA 286
>ref|XP_006382362.1| hypothetical protein POPTR_0005s01430g [Populus trichocarpa]
gi|550337721|gb|ERP60159.1| hypothetical protein
POPTR_0005s01430g [Populus trichocarpa]
Length = 265
Score = 250 bits (638), Expect = 9e-64
Identities = 126/211 (59%), Positives = 158/211 (74%), Gaps = 2/211 (0%)
Frame = -3
Query: 891 PRRFLLGCSLSTILTFPPVMDNSVSAKTY--YKEYTDLFDGYTFQYPENWMQVRGANADI 718
PRR + LS+ + DN A+ ++EY D FDGY+F+YP+NW+QVRGA ADI
Sbjct: 54 PRRNAMALILSSYMFSEFGFDNLAFAQQSVGFREYIDQFDGYSFKYPQNWIQVRGAGADI 113
Query: 717 FFRDPINIDXXXXXXXXXXXXXXXXXXEDLGPPEAAAKRILQQYLTEFMSTRLGVQRESS 538
FFRDP +D EDLGPP+ A K++L+QYLTEFMSTRLGV+RES+
Sbjct: 114 FFRDPFVLDENLSVELSSPSSSRYKSVEDLGPPQEAGKKVLKQYLTEFMSTRLGVRRESN 173
Query: 537 ILSTASRVADDGKLYYDIEVNVKSFANNNQLAIMPQDRVQLLEWNRRYLTVLGVENNCLY 358
ILST+SRVADDGKLYY +EVN+KS+ANNN+LA+MP++RV LEW+RRYL+VLGVENN LY
Sbjct: 174 ILSTSSRVADDGKLYYQVEVNIKSYANNNELAVMPRERVVRLEWDRRYLSVLGVENNQLY 233
Query: 357 QMRLQIPERVFAQEENDLRKVMNSFRVMSIS 265
++RLQ PE VF +EENDLRKVM+SFRV I+
Sbjct: 234 ELRLQTPENVFVEEENDLRKVMDSFRVNKIA 264
>ref|XP_002870234.1| photosystem II reaction center PsbP family protein [Arabidopsis
lyrata subsp. lyrata] gi|297316070|gb|EFH46493.1|
photosystem II reaction center PsbP family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 286
Score = 250 bits (638), Expect = 9e-64
Identities = 124/232 (53%), Positives = 164/232 (70%), Gaps = 2/232 (0%)
Frame = -3
Query: 966 SCRCSNNNASVGNMQQDSGQSFCSFPRR--FLLGCSLSTILTFPPVMDNSVSAKTYYKEY 793
S + + ++ V + C+ RR ++G +S ++ + + ++ + ++EY
Sbjct: 53 SSKSAKPDSPVPRNSLTDAKQVCAVGRRRSMMMGLLMSGLMVSEANLPTAFASISVFREY 112
Query: 792 TDLFDGYTFQYPENWMQVRGANADIFFRDPINIDXXXXXXXXXXXXXXXXXXEDLGPPEA 613
D FDGY+F+YP+NW+QVRGA ADIFFRDP+ +D EDLG PE
Sbjct: 113 IDTFDGYSFKYPQNWIQVRGAGADIFFRDPVVLDENLSVEFSSPSSSKYTSLEDLGSPEE 172
Query: 612 AAKRILQQYLTEFMSTRLGVQRESSILSTASRVADDGKLYYDIEVNVKSFANNNQLAIMP 433
KR+L+QYLTEFMSTRLGV+RE++ILST+SRVADDGKLYY +EVN+KS+ANNN+LA+MP
Sbjct: 173 VGKRVLRQYLTEFMSTRLGVKREANILSTSSRVADDGKLYYQVEVNIKSYANNNELAVMP 232
Query: 432 QDRVQLLEWNRRYLTVLGVENNCLYQMRLQIPERVFAQEENDLRKVMNSFRV 277
QDRV LEWNRRYL VLGVENN LY +RLQ PE+VF +EE DLR+VM+SFRV
Sbjct: 233 QDRVPRLEWNRRYLAVLGVENNRLYSIRLQTPEKVFLEEEKDLRRVMDSFRV 284
>ref|XP_002330072.1| predicted protein [Populus trichocarpa]
Length = 212
Score = 249 bits (637), Expect = 1e-63
Identities = 126/210 (60%), Positives = 157/210 (74%), Gaps = 2/210 (0%)
Frame = -3
Query: 891 PRRFLLGCSLSTILTFPPVMDNSVSAKTY--YKEYTDLFDGYTFQYPENWMQVRGANADI 718
PRR + LS+ + DN A+ ++EY D FDGY+F+YP+NW+QVRGA ADI
Sbjct: 3 PRRNAMALILSSYMFSEFGFDNLAFAQQSVGFREYIDQFDGYSFKYPQNWIQVRGAGADI 62
Query: 717 FFRDPINIDXXXXXXXXXXXXXXXXXXEDLGPPEAAAKRILQQYLTEFMSTRLGVQRESS 538
FFRDP +D EDLGPP+ A K++L+QYLTEFMSTRLGV+RES+
Sbjct: 63 FFRDPFVLDENLSVELSSPSSSRYKSVEDLGPPQEAGKKVLKQYLTEFMSTRLGVRRESN 122
Query: 537 ILSTASRVADDGKLYYDIEVNVKSFANNNQLAIMPQDRVQLLEWNRRYLTVLGVENNCLY 358
ILST+SRVADDGKLYY +EVN+KS+ANNN+LA+MP++RV LEW+RRYL+VLGVENN LY
Sbjct: 123 ILSTSSRVADDGKLYYQVEVNIKSYANNNELAVMPRERVVRLEWDRRYLSVLGVENNQLY 182
Query: 357 QMRLQIPERVFAQEENDLRKVMNSFRVMSI 268
++RLQ PE VF +EENDLRKVM+SFRV I
Sbjct: 183 ELRLQTPENVFVEEENDLRKVMDSFRVNKI 212
>ref|XP_002512537.1| Thylakoid lumenal 21.5 kDa protein, chloroplast precursor, putative
[Ricinus communis] gi|223548498|gb|EEF49989.1| Thylakoid
lumenal 21.5 kDa protein, chloroplast precursor,
putative [Ricinus communis]
Length = 265
Score = 249 bits (636), Expect = 1e-63
Identities = 124/210 (59%), Positives = 155/210 (73%), Gaps = 2/210 (0%)
Frame = -3
Query: 891 PRRFLLGCSLSTILTFPPVMDNSVSAKTY--YKEYTDLFDGYTFQYPENWMQVRGANADI 718
PRR + S+ + +S A++ ++EY D FDGY+F+YP+NW+QVRGA ADI
Sbjct: 56 PRRSTMALIFSSCILSEVGFHSSALAQSSVGFREYIDTFDGYSFKYPKNWIQVRGAGADI 115
Query: 717 FFRDPINIDXXXXXXXXXXXXXXXXXXEDLGPPEAAAKRILQQYLTEFMSTRLGVQRESS 538
FFRDP +D EDLGPP+ A K++L+QYLTEFMSTRLGV+RES
Sbjct: 116 FFRDPYVLDENLSVEMSSPSSSKYTSVEDLGPPQEAGKKVLKQYLTEFMSTRLGVRRESD 175
Query: 537 ILSTASRVADDGKLYYDIEVNVKSFANNNQLAIMPQDRVQLLEWNRRYLTVLGVENNCLY 358
ILST+SRVADDGKLYY +EVN+KS+ANNN++A+MPQDRV LEWNRRYL+VLGVENN LY
Sbjct: 176 ILSTSSRVADDGKLYYQVEVNIKSYANNNEMAVMPQDRVVRLEWNRRYLSVLGVENNRLY 235
Query: 357 QMRLQIPERVFAQEENDLRKVMNSFRVMSI 268
++RLQ PE VF +EENDLR+VM SFRV +
Sbjct: 236 ELRLQTPENVFVEEENDLRQVMESFRVNKV 265
>gb|ESW35305.1| hypothetical protein PHAVU_001G224100g [Phaseolus vulgaris]
Length = 258
Score = 249 bits (635), Expect = 2e-63
Identities = 126/209 (60%), Positives = 156/209 (74%)
Frame = -3
Query: 891 PRRFLLGCSLSTILTFPPVMDNSVSAKTYYKEYTDLFDGYTFQYPENWMQVRGANADIFF 712
PRR + LST + V ++EY D FDGY+FQYP +W+QVRGA ADIFF
Sbjct: 50 PRRKAVSLILSTYI-LSEVGVALAQQSPVFREYIDAFDGYSFQYPGSWIQVRGAGADIFF 108
Query: 711 RDPINIDXXXXXXXXXXXXXXXXXXEDLGPPEAAAKRILQQYLTEFMSTRLGVQRESSIL 532
RDP +D EDLGPP+ A K++L+Q LTEFMSTRLGV+RES+IL
Sbjct: 109 RDPYVLDENLSLEISSPSSSQYKSVEDLGPPQEAGKKVLKQCLTEFMSTRLGVRRESNIL 168
Query: 531 STASRVADDGKLYYDIEVNVKSFANNNQLAIMPQDRVQLLEWNRRYLTVLGVENNCLYQM 352
ST+SRVADDGKLYY++EVN+KS+ANNN+LA+MPQDRV LEWNRRYL+VLGVENN LY++
Sbjct: 169 STSSRVADDGKLYYEVEVNIKSYANNNELAVMPQDRVTRLEWNRRYLSVLGVENNQLYEL 228
Query: 351 RLQIPERVFAQEENDLRKVMNSFRVMSIS 265
RLQ+PE VFA+EE+DLR+VM+SFRV I+
Sbjct: 229 RLQVPENVFAEEESDLRRVMDSFRVNKIA 257
>ref|NP_001067041.1| Os12g0564400 [Oryza sativa Japonica Group]
gi|108862837|gb|ABA98969.2| Thylakoid lumenal 21.5 kDa
protein, chloroplast precursor, putative, expressed
[Oryza sativa Japonica Group]
gi|113649548|dbj|BAF30060.1| Os12g0564400 [Oryza sativa
Japonica Group] gi|215737646|dbj|BAG96776.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215765534|dbj|BAG87231.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 249
Score = 248 bits (633), Expect = 3e-63
Identities = 132/240 (55%), Positives = 166/240 (69%), Gaps = 4/240 (1%)
Frame = -3
Query: 984 ASVPS-YSCRCSNNNASVGNMQQDSGQSFCSFPRRFLLGCSLSTILTF---PPVMDNSVS 817
AS P+ SCRC+ + PRR +L LST F P + + +
Sbjct: 22 ASPPARLSCRCATHTV----------------PRRNVLSTMLSTSTVFLFGPKQITLAET 65
Query: 816 AKTYYKEYTDLFDGYTFQYPENWMQVRGANADIFFRDPINIDXXXXXXXXXXXXXXXXXX 637
++EY D FDGY+F YP++W+QVRGA ADIFFRDP +D
Sbjct: 66 TGGTFREYIDTFDGYSFLYPKSWIQVRGAGADIFFRDPFFLDENMSVEISSPSSSKYMTV 125
Query: 636 EDLGPPEAAAKRILQQYLTEFMSTRLGVQRESSILSTASRVADDGKLYYDIEVNVKSFAN 457
EDLGPPE AA+R+LQQYLTEFMSTRLGV+R S+ILS +S+VADDGKLYY++EVN+KSFA+
Sbjct: 126 EDLGPPEKAAERVLQQYLTEFMSTRLGVRRTSNILSASSKVADDGKLYYEVEVNIKSFAS 185
Query: 456 NNQLAIMPQDRVQLLEWNRRYLTVLGVENNCLYQMRLQIPERVFAQEENDLRKVMNSFRV 277
NN+LA+MPQDRVQ LEW+RRYL+VLGVEN LY++RLQ PE+VF +EE DLR+VM+SFRV
Sbjct: 186 NNELAVMPQDRVQRLEWDRRYLSVLGVENKRLYELRLQSPEKVFKEEEGDLRRVMDSFRV 245
>gb|EOY11706.1| Photosystem II reaction center PsbP family protein isoform 2
[Theobroma cacao]
Length = 254
Score = 248 bits (632), Expect = 4e-63
Identities = 118/180 (65%), Positives = 145/180 (80%)
Frame = -3
Query: 801 KEYTDLFDGYTFQYPENWMQVRGANADIFFRDPINIDXXXXXXXXXXXXXXXXXXEDLGP 622
+EY D FDGY+F+YP+NW+QVRGA ADIFFRDP +D EDLGP
Sbjct: 75 REYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPYVLDENLSVEMSSPSSSRYKTVEDLGP 134
Query: 621 PEAAAKRILQQYLTEFMSTRLGVQRESSILSTASRVADDGKLYYDIEVNVKSFANNNQLA 442
P+ A K++L+QYLTEFMSTRLGV+RES+ILST+SRVADDGKLYY +EVN+KS+AN N+LA
Sbjct: 135 PQEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRVADDGKLYYQVEVNIKSYANTNELA 194
Query: 441 IMPQDRVQLLEWNRRYLTVLGVENNCLYQMRLQIPERVFAQEENDLRKVMNSFRVMSIST 262
+MPQDRV LEWNRRYL+VLGVENN LY++RLQ PE VF +EENDLR+VM+SFRV +++
Sbjct: 195 VMPQDRVPRLEWNRRYLSVLGVENNRLYELRLQTPENVFVEEENDLRQVMDSFRVNKVTS 254
>gb|EOY11705.1| Photosystem II reaction center PsbP family protein isoform 1
[Theobroma cacao]
Length = 285
Score = 248 bits (632), Expect = 4e-63
Identities = 118/180 (65%), Positives = 145/180 (80%)
Frame = -3
Query: 801 KEYTDLFDGYTFQYPENWMQVRGANADIFFRDPINIDXXXXXXXXXXXXXXXXXXEDLGP 622
+EY D FDGY+F+YP+NW+QVRGA ADIFFRDP +D EDLGP
Sbjct: 106 REYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPYVLDENLSVEMSSPSSSRYKTVEDLGP 165
Query: 621 PEAAAKRILQQYLTEFMSTRLGVQRESSILSTASRVADDGKLYYDIEVNVKSFANNNQLA 442
P+ A K++L+QYLTEFMSTRLGV+RES+ILST+SRVADDGKLYY +EVN+KS+AN N+LA
Sbjct: 166 PQEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRVADDGKLYYQVEVNIKSYANTNELA 225
Query: 441 IMPQDRVQLLEWNRRYLTVLGVENNCLYQMRLQIPERVFAQEENDLRKVMNSFRVMSIST 262
+MPQDRV LEWNRRYL+VLGVENN LY++RLQ PE VF +EENDLR+VM+SFRV +++
Sbjct: 226 VMPQDRVPRLEWNRRYLSVLGVENNRLYELRLQTPENVFVEEENDLRQVMDSFRVNKVTS 285
>ref|NP_567468.1| photosystem II reaction center PsbP family protein [Arabidopsis
thaliana] gi|13959580|sp|O23403.1|PPD1_ARATH RecName:
Full=PsbP domain-containing protein 1, chloroplastic;
AltName: Full=OEC23-like protein 3; AltName:
Full=PsbP-related thylakoid lumenal protein 1; Flags:
Precursor gi|2244908|emb|CAB10329.1| hypothetical
protein [Arabidopsis thaliana]
gi|7268298|emb|CAB78593.1| hypothetical protein
[Arabidopsis thaliana] gi|332658213|gb|AEE83613.1|
photosystem II reaction center PsbP family protein
[Arabidopsis thaliana]
Length = 287
Score = 248 bits (632), Expect = 4e-63
Identities = 126/242 (52%), Positives = 167/242 (69%), Gaps = 3/242 (1%)
Frame = -3
Query: 984 ASVPSY-SCRCSNNNASVGNMQQDSGQSFCSFPRR--FLLGCSLSTILTFPPVMDNSVSA 814
+S P Y S + + + V + C+ RR ++G +S ++ + + ++
Sbjct: 46 SSGPKYQSAKSAKPESPVAINCLTDAKQVCAVGRRKSMMMGLLMSGLIVSQANLPTAFAS 105
Query: 813 KTYYKEYTDLFDGYTFQYPENWMQVRGANADIFFRDPINIDXXXXXXXXXXXXXXXXXXE 634
++EY D FDGY+F+YP+NW+QVRGA ADIFFRDP+ +D E
Sbjct: 106 TPVFREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPVVLDENLSVEFSSPSSSNYTSLE 165
Query: 633 DLGPPEAAAKRILQQYLTEFMSTRLGVQRESSILSTASRVADDGKLYYDIEVNVKSFANN 454
DLG PE KR+L+QYLTEFMSTRLGV+R+++ILST+SRVADDGKLYY +EVN+KS+ANN
Sbjct: 166 DLGSPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSSRVADDGKLYYQVEVNIKSYANN 225
Query: 453 NQLAIMPQDRVQLLEWNRRYLTVLGVENNCLYQMRLQIPERVFAQEENDLRKVMNSFRVM 274
N+LA+MPQDRV LEWNRRYL VLGVEN+ LY +RLQ PE+VF +EE DLR+VM+SFRV
Sbjct: 226 NELAVMPQDRVARLEWNRRYLAVLGVENDRLYSIRLQTPEKVFLEEEKDLRRVMDSFRVE 285
Query: 273 SI 268
I
Sbjct: 286 KI 287
>ref|XP_002442334.1| hypothetical protein SORBIDRAFT_08g018390 [Sorghum bicolor]
gi|241943027|gb|EES16172.1| hypothetical protein
SORBIDRAFT_08g018390 [Sorghum bicolor]
Length = 255
Score = 248 bits (632), Expect = 4e-63
Identities = 123/209 (58%), Positives = 160/209 (76%), Gaps = 3/209 (1%)
Frame = -3
Query: 891 PRRFLLGCSLST---ILTFPPVMDNSVSAKTYYKEYTDLFDGYTFQYPENWMQVRGANAD 721
PRR +L LST +L P + + ++ ++EY D+FDGYTF YP++W+QVRGA AD
Sbjct: 44 PRRNVLSTMLSTSTILLLGPRQITLAETSGGAFREYIDIFDGYTFLYPKSWIQVRGAGAD 103
Query: 720 IFFRDPINIDXXXXXXXXXXXXXXXXXXEDLGPPEAAAKRILQQYLTEFMSTRLGVQRES 541
IFFRDP +D EDLGPPE AA+++L+QYLTEFMSTRLGV+RES
Sbjct: 104 IFFRDPFVLDENMSVEISSPSSSKYMSVEDLGPPEKAAEKVLKQYLTEFMSTRLGVRRES 163
Query: 540 SILSTASRVADDGKLYYDIEVNVKSFANNNQLAIMPQDRVQLLEWNRRYLTVLGVENNCL 361
++LS S+VADDGKLYY++EVN+KS+A+NN+LA+MPQDRVQ LEW+RRYL+VLGVEN L
Sbjct: 164 NVLSAVSKVADDGKLYYEVEVNIKSYASNNELAVMPQDRVQSLEWDRRYLSVLGVENKRL 223
Query: 360 YQMRLQIPERVFAQEENDLRKVMNSFRVM 274
Y++RLQ PE+VF QEE D+R+VM+SFRV+
Sbjct: 224 YELRLQTPEQVFMQEEEDIRRVMDSFRVI 252
>gb|AAM61572.1| unknown [Arabidopsis thaliana]
Length = 287
Score = 246 bits (629), Expect = 9e-63
Identities = 125/242 (51%), Positives = 167/242 (69%), Gaps = 3/242 (1%)
Frame = -3
Query: 984 ASVPSY-SCRCSNNNASVGNMQQDSGQSFCSFPRR--FLLGCSLSTILTFPPVMDNSVSA 814
+S P Y S + + + V + C+ RR ++G +S ++ + + ++
Sbjct: 46 SSGPKYQSAKSAKPESPVAINCLTDAKQVCAVGRRKSMMMGLLMSGLIVSQANLPTAFAS 105
Query: 813 KTYYKEYTDLFDGYTFQYPENWMQVRGANADIFFRDPINIDXXXXXXXXXXXXXXXXXXE 634
++EY D FDGY+F+YP+NW+QVRGA ADIFFRDP+ +D E
Sbjct: 106 TPVFREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPVVLDENLSVEFSSPSSSNYTSLE 165
Query: 633 DLGPPEAAAKRILQQYLTEFMSTRLGVQRESSILSTASRVADDGKLYYDIEVNVKSFANN 454
DLG PE KR+L+QYLTEFMSTRLGV+R+++ILST+SRVADDGKLYY +EVN+KS+ANN
Sbjct: 166 DLGSPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSSRVADDGKLYYQVEVNIKSYANN 225
Query: 453 NQLAIMPQDRVQLLEWNRRYLTVLGVENNCLYQMRLQIPERVFAQEENDLRKVMNSFRVM 274
N+LA+MPQDRV LEWNRRYL VLGV+N+ LY +RLQ PE+VF +EE DLR+VM+SFRV
Sbjct: 226 NELAVMPQDRVARLEWNRRYLAVLGVDNDRLYSIRLQTPEKVFLEEEKDLRRVMDSFRVE 285
Query: 273 SI 268
I
Sbjct: 286 KI 287
>ref|XP_006285869.1| hypothetical protein CARUB_v10007363mg [Capsella rubella]
gi|482554574|gb|EOA18767.1| hypothetical protein
CARUB_v10007363mg [Capsella rubella]
Length = 300
Score = 246 bits (628), Expect = 1e-62
Identities = 127/245 (51%), Positives = 169/245 (68%), Gaps = 6/245 (2%)
Frame = -3
Query: 984 ASVPSYSCRCSNNNAS---VGNMQQDSGQSFCSFPRR---FLLGCSLSTILTFPPVMDNS 823
+S P Y ++ N + N D Q+ C+ RR ++G +S ++ + +
Sbjct: 57 SSGPMYQSAANSANPESHVLKNCLTDDKQA-CAVGRRKNMMMMGLLMSGLMVSEANLPAA 115
Query: 822 VSAKTYYKEYTDLFDGYTFQYPENWMQVRGANADIFFRDPINIDXXXXXXXXXXXXXXXX 643
++ ++EY D FDGY+F+YP+NW+QVRGA ADIFFRDP+ +D
Sbjct: 116 FASTPVFREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPVVLDENLAVEFSSPSSSNYM 175
Query: 642 XXEDLGPPEAAAKRILQQYLTEFMSTRLGVQRESSILSTASRVADDGKLYYDIEVNVKSF 463
EDLG PE A KR+++QYLTEFMSTRLGV+R+++ILST+SRVADDGK YY +EVN+KS+
Sbjct: 176 SLEDLGSPEEAGKRVVRQYLTEFMSTRLGVKRQATILSTSSRVADDGKPYYQVEVNIKSY 235
Query: 462 ANNNQLAIMPQDRVQLLEWNRRYLTVLGVENNCLYQMRLQIPERVFAQEENDLRKVMNSF 283
ANNN+LA+MP+DRV LEWNRRYL VLGVENN LY +RLQ PE+VF +EE DLR+VM+SF
Sbjct: 236 ANNNELAVMPEDRVARLEWNRRYLAVLGVENNRLYSLRLQTPEKVFLEEEKDLRRVMDSF 295
Query: 282 RVMSI 268
RV I
Sbjct: 296 RVEKI 300
>ref|XP_002319475.1| hypothetical protein POPTR_0013s00790g [Populus trichocarpa]
gi|118485159|gb|ABK94442.1| unknown [Populus
trichocarpa] gi|222857851|gb|EEE95398.1| hypothetical
protein POPTR_0013s00790g [Populus trichocarpa]
Length = 265
Score = 246 bits (628), Expect = 1e-62
Identities = 123/212 (58%), Positives = 159/212 (75%), Gaps = 3/212 (1%)
Frame = -3
Query: 891 PRRFLLGCSLSTILTFPPVMDNSVS---AKTYYKEYTDLFDGYTFQYPENWMQVRGANAD 721
PRR + LS+ + F V N+++ ++EY D FDGY+ ++P+NW+QVRGA AD
Sbjct: 54 PRRNAMALILSSYI-FSEVGFNNIAFAQRSVGFREYIDQFDGYSLKHPQNWIQVRGAGAD 112
Query: 720 IFFRDPINIDXXXXXXXXXXXXXXXXXXEDLGPPEAAAKRILQQYLTEFMSTRLGVQRES 541
IFFRDP +D EDLGPPE A K++L+QYLTEFMSTRLGV+RES
Sbjct: 113 IFFRDPFVLDENLSVELSSPSSSNYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRES 172
Query: 540 SILSTASRVADDGKLYYDIEVNVKSFANNNQLAIMPQDRVQLLEWNRRYLTVLGVENNCL 361
+I+ST+SRVADDGKLYY +EVN+KS+ANNN+LA+MPQ+RV LEWNRRY++VLGVENN L
Sbjct: 173 NIISTSSRVADDGKLYYQVEVNIKSYANNNELAVMPQERVVRLEWNRRYMSVLGVENNRL 232
Query: 360 YQMRLQIPERVFAQEENDLRKVMNSFRVMSIS 265
Y++RLQ PE VF +EENDLR+VM+SFRV ++
Sbjct: 233 YELRLQTPENVFVEEENDLRQVMDSFRVNKVT 264
>ref|NP_001031646.1| photosystem II reaction center PsbP family protein [Arabidopsis
thaliana] gi|51969264|dbj|BAD43324.1| unknown protein
[Arabidopsis thaliana] gi|332658214|gb|AEE83614.1|
photosystem II reaction center PsbP family protein
[Arabidopsis thaliana]
Length = 205
Score = 246 bits (627), Expect = 2e-62
Identities = 118/204 (57%), Positives = 153/204 (75%)
Frame = -3
Query: 879 LLGCSLSTILTFPPVMDNSVSAKTYYKEYTDLFDGYTFQYPENWMQVRGANADIFFRDPI 700
++G +S ++ + + ++ ++EY D FDGY+F+YP+NW+QVRGA ADIFFRDP+
Sbjct: 2 MMGLLMSGLIVSQANLPTAFASTPVFREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPV 61
Query: 699 NIDXXXXXXXXXXXXXXXXXXEDLGPPEAAAKRILQQYLTEFMSTRLGVQRESSILSTAS 520
+D EDLG PE KR+L+QYLTEFMSTRLGV+R+++ILST+S
Sbjct: 62 VLDENLSVEFSSPSSSNYTSLEDLGSPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSS 121
Query: 519 RVADDGKLYYDIEVNVKSFANNNQLAIMPQDRVQLLEWNRRYLTVLGVENNCLYQMRLQI 340
RVADDGKLYY +EVN+KS+ANNN+LA+MPQDRV LEWNRRYL VLGVEN+ LY +RLQ
Sbjct: 122 RVADDGKLYYQVEVNIKSYANNNELAVMPQDRVARLEWNRRYLAVLGVENDRLYSIRLQT 181
Query: 339 PERVFAQEENDLRKVMNSFRVMSI 268
PE+VF +EE DLR+VM+SFRV I
Sbjct: 182 PEKVFLEEEKDLRRVMDSFRVEKI 205
>ref|XP_006414492.1| hypothetical protein EUTSA_v10025982mg [Eutrema salsugineum]
gi|557115662|gb|ESQ55945.1| hypothetical protein
EUTSA_v10025982mg [Eutrema salsugineum]
Length = 267
Score = 245 bits (626), Expect = 2e-62
Identities = 126/214 (58%), Positives = 157/214 (73%), Gaps = 3/214 (1%)
Frame = -3
Query: 900 CSFPRRFLL--GCSLSTILTFPPVMDNSVSAKT-YYKEYTDLFDGYTFQYPENWMQVRGA 730
C+ RR L+ G +S ++ + S A T ++EY D FDGY+F+YP+NW+QVRGA
Sbjct: 54 CAVGRRSLMMSGLLMSGLMVSEANLPTSSFALTSVFREYIDTFDGYSFKYPQNWIQVRGA 113
Query: 729 NADIFFRDPINIDXXXXXXXXXXXXXXXXXXEDLGPPEAAAKRILQQYLTEFMSTRLGVQ 550
ADIFFRDPI +D EDLG PE A K +L+QYLTEFMSTRLGV+
Sbjct: 114 GADIFFRDPIVLDENLSVEFSSPSSSKYKSLEDLGSPEEAGKTVLRQYLTEFMSTRLGVR 173
Query: 549 RESSILSTASRVADDGKLYYDIEVNVKSFANNNQLAIMPQDRVQLLEWNRRYLTVLGVEN 370
RE++IL+T+SRVADDGKLYY +EVN+KS+ANNN+LA+MPQDRV LEW+RRYL VLGVEN
Sbjct: 174 REANILTTSSRVADDGKLYYQVEVNIKSYANNNELAVMPQDRVARLEWDRRYLAVLGVEN 233
Query: 369 NCLYQMRLQIPERVFAQEENDLRKVMNSFRVMSI 268
N LY +RLQ PE+VF +EE DLR+VM+SFRV I
Sbjct: 234 NRLYSLRLQTPEKVFQEEEKDLRRVMDSFRVEKI 267
>ref|XP_004962751.1| PREDICTED: psbP domain-containing protein 1, chloroplastic-like
[Setaria italica]
Length = 258
Score = 245 bits (625), Expect = 3e-62
Identities = 122/209 (58%), Positives = 158/209 (75%), Gaps = 3/209 (1%)
Frame = -3
Query: 891 PRRFLLGCSLST---ILTFPPVMDNSVSAKTYYKEYTDLFDGYTFQYPENWMQVRGANAD 721
PRR +L LST ++ P + + + ++EY D FDGYTF YP++W+QV+GA AD
Sbjct: 47 PRRNVLSTMLSTSTVLILGPKQITLAETTGGAFREYIDTFDGYTFLYPKSWIQVKGAGAD 106
Query: 720 IFFRDPINIDXXXXXXXXXXXXXXXXXXEDLGPPEAAAKRILQQYLTEFMSTRLGVQRES 541
IFFRDP +D EDLGPPE AA+++L+QYLTEFMSTRLGV+RES
Sbjct: 107 IFFRDPFVLDENMSVEISSPSSSKYTSVEDLGPPEKAAEKVLKQYLTEFMSTRLGVRRES 166
Query: 540 SILSTASRVADDGKLYYDIEVNVKSFANNNQLAIMPQDRVQLLEWNRRYLTVLGVENNCL 361
++LS S+VADDGKLYY++EVN+KS+A+NN+LA+MPQDRVQ LEW+RRYL+VLGVEN L
Sbjct: 167 NVLSALSKVADDGKLYYEVEVNIKSYASNNELAVMPQDRVQSLEWDRRYLSVLGVENKRL 226
Query: 360 YQMRLQIPERVFAQEENDLRKVMNSFRVM 274
Y++RLQ PE+VF QEE DLR+VM+SFRV+
Sbjct: 227 YELRLQTPEQVFMQEEEDLRRVMDSFRVI 255