BLASTX nr result

ID: Ephedra27_contig00013512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00013512
         (1892 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN40217.1| unknown [Picea sitchensis]                              68   2e-08

>gb|ACN40217.1| unknown [Picea sitchensis]
          Length = 894

 Score = 67.8 bits (164), Expect = 2e-08
 Identities = 119/497 (23%), Positives = 192/497 (38%), Gaps = 18/497 (3%)
 Frame = +1

Query: 1    RLLAQKYLVDKEEYKQAGALSLENSTDSSFIDMENCIC----LPSEDSIPSFPTKIVVLK 168
            R   +K+L ++E  +Q   LS + S     +  +  IC       +++I S PT+IVVLK
Sbjct: 364  RQKGKKFLTERE-VEQVRVLSPDKSMPDYSVQGQKNICPALSSDGKNNICSLPTRIVVLK 422

Query: 169  PGKGEXXXXXXXXXXXXXXXL-IGSNNPEMSRNSTQDFLLKVKEKLQKNLGEKPKPKSRF 345
            P  G                   G  +PE +R+STQDFL +V  +L+    EK K +SR 
Sbjct: 423  PALGRCQNFRPSPSPSCSPRSQTGLRDPEGARDSTQDFLQEVSNRLKLGFAEKRKDESRI 482

Query: 346  YDESFHSAFCDFPKGSRNVVQQLSRITTASLEDPASMQPTAPPQNDSS----IIRTMCYC 513
             +E       D PK  R + +Q++R    S+        T    NDSS    +   M + 
Sbjct: 483  -NEVVQDQIRDVPKHPRQIARQIARQVKESV--------TRDLANDSSSLVEVPTLMGFS 533

Query: 514  RKSRNTGQ-DECSGATGFDIAMDSSTSNATSTPDLSFSKNNK-SRKLVXXXXXXXXXXXX 687
             K  +  +  + S     D  ++ STS   S+ D      +  S  L             
Sbjct: 534  EKKSSLNRLTDTSPDVSIDTFLELSTSGTKSSWDYRTKLGSSLSSSLCKPSDSPAYENKA 593

Query: 688  XXXYKEQCSENYLGYGFQSNIRNASWT--KDMEFQRRYKDVFYSEHCHCEILNCADKQRN 861
                  + S+   G   + +IR    T  K + F    K VF S+         + +Q N
Sbjct: 594  ARKTVSERSKATQGNEEKKHIRQIQDTLGKLLAFPDDKKQVFRSK---------SYQQNN 644

Query: 862  SELFDDLYQKVREDRFVEVNTDILCHLHQKDSYPEIHEALACLHEKYTNDFCDFHDAVRK 1041
                 D           E   +  C +H+  S  +    L  +H ++     +       
Sbjct: 645  RANMGD-----------EECYEFFCDMHEPGSKIKRPTRLD-MHAEWDGSLDN------- 685

Query: 1042 HGDSLRHVTDAKDGLSEKAIAQNQEIHES-PIMSHKEKGNNGDVRYSNSKEETGYTDSDR 1218
                 R+V + +D +S  ++ ++Q +  S  I      G N +    N   E    D DR
Sbjct: 686  -----RNVDNNRD-ISPSSLLRSQSLPVSATIFERGSVGKNSNTSCVNRAIE-NEIDPDR 738

Query: 1219 ---MVVGEFSDCQGNRSGYLGKITDSKDNRML-KRESSGSESDSTRLLEPDKVLEIHLEG 1386
                +  E    +  RS +  K+++ K   +L +R SS  + DS   L+P+  LEIHL+ 
Sbjct: 739  RGDTLPVESIKYRSKRSRFKAKVSNLKGRFLLRRRRSSSKKMDSLCTLQPNNYLEIHLDE 798

Query: 1387 FLDLPKENNIGPGQNKE 1437
              D+  E     G  KE
Sbjct: 799  GCDILPEVPFESGTLKE 815


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