BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00013494
         (1366 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EFA77396.1| hypothetical protein PPL_12611 [Polysphondylium p...    59   6e-06

>gb|EFA77396.1| hypothetical protein PPL_12611 [Polysphondylium pallidum PN500]
          Length = 909

 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 15/274 (5%)
 Frame = -3

Query: 980 ATTFIQPRDH--LSSHRQEKQNGHGD-----AFLSGSRKRNSHSKKRVAGGKVVDSCAID 822
           ++T     DH  ++S  Q + + H D        S S  RNS   ++    K +DS  ID
Sbjct: 14  SSTSTPTTDHSNINSDNQNENDSHSDDKNNNIVNSNSNSRNSIDVQQKDNTKELDS--ID 71

Query: 821 TTSNGVYAKSCNLFDQNKVQSLHRSSSLGNVNMPSS----DLMNTRHFAVDSGVHCLPRA 654
           + ++G     CN+ + +  Q LH+ ++   +N  S      ++       D  ++    A
Sbjct: 72  SKNDGSDTLECNIINDSVQQQLHQQTTESEINKSSEIKKMSIVELMEKQGDPSINLTRSA 131

Query: 653 SSMS---EIPTQTPTHKSTLNNYKTLSRSHNSSQSLNMMTMRGKSHANGNALPPXXXXXX 483
           SS+S    I T +P+   T    +  S + + SQSL  +        +G  LP       
Sbjct: 132 SSLSLDRPISTSSPSEMDTSKKTRPHSINLSKSQSLVQLPTLHSPTLSGKYLPLTPHLSI 191

Query: 482 XXXXXXXGEKQLLKNVPMNQVSFLQQ-EKNPPNWGTNNANEGMFDSSSVERVQENNLELS 306
                   E +  K +P++   +     +NP     +N +  +  SSS+E +   + +  
Sbjct: 192 LEQIKVLSELEKQKELPISNEQYENLFIENPLPLSVSNKSISLSSSSSIEDINNTSSDEL 251

Query: 305 SASKVIDANNNFGFSHLRIMSASTKDIASKNEDI 204
           S S  I  NN+   +H    S +  +I S N+D+
Sbjct: 252 SVSTEITKNNDNHGNH----SNNNNNIISTNDDL 281