BLASTX nr result

ID: Ephedra27_contig00013298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00013298
         (491 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006473146.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    57   3e-06
gb|EOY16880.1| DEAD-box ATP-dependent RNA helicase 39 isoform 1 ...    57   3e-06
ref|XP_006434543.1| hypothetical protein CICLE_v10000567mg [Citr...    57   3e-06
gb|EPS62897.1| hypothetical protein M569_11893, partial [Genlise...    55   7e-06
gb|EXB37790.1| DEAD-box ATP-dependent RNA helicase 39 [Morus not...    55   1e-05
ref|XP_002872459.1| hypothetical protein ARALYDRAFT_911240 [Arab...    55   1e-05

>ref|XP_006473146.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Citrus
           sinensis]
          Length = 637

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/80 (37%), Positives = 44/80 (55%)
 Frame = -2

Query: 241 SSSTLRKSHRDDEDNDVIEKRTKRVEYXXXXXXXXXXXXXXLGAVEELNISVPTEVQALG 62
           +  +L    R+ +  D  EK+ K+                 +GAV E++I VPTE+Q +G
Sbjct: 91  TQESLTSVAREGKGEDFDEKKKKKKVVSVGSFEELGLSEEIMGAVREMDIEVPTEIQCIG 150

Query: 61  IRAILRGQSIFLASHTGSGK 2
           I A+L G+S+ L SHTGSGK
Sbjct: 151 IPAVLDGKSVVLGSHTGSGK 170


>gb|EOY16880.1| DEAD-box ATP-dependent RNA helicase 39 isoform 1 [Theobroma cacao]
           gi|508724984|gb|EOY16881.1| DEAD-box ATP-dependent RNA
           helicase 39 isoform 1 [Theobroma cacao]
          Length = 617

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/81 (37%), Positives = 44/81 (54%)
 Frame = -2

Query: 244 SSSSTLRKSHRDDEDNDVIEKRTKRVEYXXXXXXXXXXXXXXLGAVEELNISVPTEVQAL 65
           S S    K    D++ D  +K  KR +               +GAV E+ I VPTE+Q +
Sbjct: 85  SPSKPQEKVTAFDKEGDASDKGKKRKKGMVESFEELGLSEEVMGAVREMGIEVPTEIQCI 144

Query: 64  GIRAILRGQSIFLASHTGSGK 2
           G+ ++L+G+S+ L SHTGSGK
Sbjct: 145 GVPSVLQGRSVVLGSHTGSGK 165


>ref|XP_006434543.1| hypothetical protein CICLE_v10000567mg [Citrus clementina]
           gi|557536665|gb|ESR47783.1| hypothetical protein
           CICLE_v10000567mg [Citrus clementina]
          Length = 637

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/80 (37%), Positives = 43/80 (53%)
 Frame = -2

Query: 241 SSSTLRKSHRDDEDNDVIEKRTKRVEYXXXXXXXXXXXXXXLGAVEELNISVPTEVQALG 62
           +  +L    R+ +  D  EK+ K+                 +GAV E+ I VPTE+Q +G
Sbjct: 91  TQESLTSIAREGKGEDFDEKKKKKKVVSVGSFEELGLSEEIMGAVREMGIEVPTEIQCIG 150

Query: 61  IRAILRGQSIFLASHTGSGK 2
           I A+L G+S+ L SHTGSGK
Sbjct: 151 IPAVLDGKSVVLGSHTGSGK 170


>gb|EPS62897.1| hypothetical protein M569_11893, partial [Genlisea aurea]
          Length = 238

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/38 (63%), Positives = 33/38 (86%)
 Frame = -2

Query: 115 GAVEELNISVPTEVQALGIRAILRGQSIFLASHTGSGK 2
           GA+EE+ ISVP+E+Q++GI A+L G+S+ L SHTGSGK
Sbjct: 89  GALEEMGISVPSEIQSIGIPAVLSGKSVVLGSHTGSGK 126


>gb|EXB37790.1| DEAD-box ATP-dependent RNA helicase 39 [Morus notabilis]
          Length = 636

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/38 (63%), Positives = 31/38 (81%)
 Frame = -2

Query: 115 GAVEELNISVPTEVQALGIRAILRGQSIFLASHTGSGK 2
           GAV E+ I VPTE+Q++GI A+L G+S+ L SHTGSGK
Sbjct: 141 GAVREMGIEVPTEIQSIGIPAVLEGKSVVLGSHTGSGK 178


>ref|XP_002872459.1| hypothetical protein ARALYDRAFT_911240 [Arabidopsis lyrata subsp.
           lyrata] gi|297318296|gb|EFH48718.1| hypothetical protein
           ARALYDRAFT_911240 [Arabidopsis lyrata subsp. lyrata]
          Length = 620

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/69 (42%), Positives = 42/69 (60%)
 Frame = -2

Query: 208 DEDNDVIEKRTKRVEYXXXXXXXXXXXXXXLGAVEELNISVPTEVQALGIRAILRGQSIF 29
           +E+N + +K  K VE               +GA++ELNI VPTE+Q +GI A++  +S+ 
Sbjct: 98  EEENSIRKKSKKLVE----NFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVV 153

Query: 28  LASHTGSGK 2
           L SHTGSGK
Sbjct: 154 LGSHTGSGK 162


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