BLASTX nr result
ID: Ephedra27_contig00013153
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00013153
(955 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tpg|DAA43005.1| TPA: hypothetical protein ZEAMMB73_941906 [Zea m... 100 1e-18
gb|EMS58929.1| Endoribonuclease Dicer-like protein 1 [Triticum u... 97 7e-18
ref|XP_004985932.1| PREDICTED: endoribonuclease Dicer homolog 1-... 96 2e-17
ref|XP_002458957.1| hypothetical protein SORBIDRAFT_03g043355 [S... 95 3e-17
gb|EMT07624.1| Endoribonuclease Dicer-1-like protein [Aegilops t... 94 6e-17
ref|XP_004970995.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl... 94 8e-17
tpg|DAA56229.1| TPA: hypothetical protein ZEAMMB73_255524 [Zea m... 92 2e-16
gb|ESW19460.1| hypothetical protein PHAVU_006G127100g [Phaseolus... 92 3e-16
ref|XP_002529460.1| ribonuclease III, putative [Ricinus communis... 92 3e-16
gb|ESW19463.1| hypothetical protein PHAVU_006G127200g [Phaseolus... 92 4e-16
ref|XP_002979043.1| hypothetical protein SELMODRAFT_444049 [Sela... 91 5e-16
ref|XP_002865277.1| hypothetical protein ARALYDRAFT_917014 [Arab... 91 6e-16
gb|EPS71118.1| hypothetical protein M569_03642, partial [Genlise... 91 8e-16
ref|XP_004494885.1| PREDICTED: endoribonuclease Dicer homolog 1-... 90 1e-15
ref|XP_004494884.1| PREDICTED: endoribonuclease Dicer homolog 1-... 90 1e-15
ref|XP_002991516.1| hypothetical protein SELMODRAFT_448444 [Sela... 90 1e-15
gb|ABD32724.1| Helicase, C-terminal; Argonaute and Dicer protein... 90 1e-15
ref|XP_003626620.1| Endoribonuclease Dicer-like protein [Medicag... 90 1e-15
ref|XP_001766164.1| dsRNA-specific nuclease dicer and related ri... 90 1e-15
ref|NP_197532.3| dicer-like protein 4 [Arabidopsis thaliana] gi|... 89 2e-15
>tpg|DAA43005.1| TPA: hypothetical protein ZEAMMB73_941906 [Zea mays]
Length = 1307
Score = 100 bits (248), Expect = 1e-18
Identities = 98/370 (26%), Positives = 154/370 (41%), Gaps = 74/370 (20%)
Frame = +3
Query: 24 DDSYESIKPPKVLASLLQCITGAVFIDSGE---SFPLVWKVIRPILEPLEELFDKAAGKK 194
D S + K LA +++ + G ++ G+ + + W I L+P E + K
Sbjct: 897 DSSCYRVLSSKTLADVVEALIGVYYVAGGKIATNHLMKWIGINAELDPQEI----PSSKP 952
Query: 195 RKRPQPPFGEAQ--QLEKKIGYTFKNKNLIRET----------VNCSPRLEILGDAVVDW 338
P+ LE +G F+NK L+ E V+C RLE +GDAV+D
Sbjct: 953 YNIPESIIKSINFDTLEGALGIKFQNKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDH 1012
Query: 339 LMVKHIYTHYPELEVGHFSALLSANVCNAKLGRAIVKYGLYHCINFEESSEHEVVKKTVK 518
L+ KH++ Y +L G + L +A V N R VK+ L+ + S+ +++ VK
Sbjct: 1013 LITKHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVK 1072
Query: 519 DL-EKYEKDGSRDETI---LLPKVLANFMECIAGAVFIDSGESFPLVWKVIR-------- 662
D+ E+ K G + PKVL + E IAGA+F+DSG + +VWKV +
Sbjct: 1073 DVQEELSKPGFNSFGLGDCKAPKVLGDIFESIAGAIFLDSGCATSVVWKVFQPLLDPMVT 1132
Query: 663 --------------------XXXXXXXXXFPKAATIE--------GVKKVTYKRMWR--- 749
AT+E GV + K+M +
Sbjct: 1133 PDTLPMHPVRELQERCQQQAEGLEYKASRTGNVATVEVLVDGIQIGVAQNPQKKMAQKLA 1192
Query: 750 -------IKKKVAGSMQIWEKMNGKK---------LLQLCQERKLPTPQYRCIQEKGFGN 881
+K+K + + EK KK L +C R+ P PQYRCI E G +
Sbjct: 1193 ARNALVVLKEKETAAKKDTEKDGEKKNGSQFTRQTLNDICLRRQWPMPQYRCINEGGPAH 1252
Query: 882 KKMSLYSVQI 911
K +Y+V++
Sbjct: 1253 AKRFVYAVRV 1262
>gb|EMS58929.1| Endoribonuclease Dicer-like protein 1 [Triticum urartu]
Length = 1577
Score = 97.4 bits (241), Expect = 7e-18
Identities = 100/382 (26%), Positives = 155/382 (40%), Gaps = 80/382 (20%)
Frame = +3
Query: 6 EKDGSRDDSYESIKPPKVLASLLQCITGAVFIDSGE---SFPLVWKVIRPILEPLEELFD 176
E DG D S + K LA +++ + G ++ G+ + + W I L+P E
Sbjct: 1163 EIDG--DSSCYRVLSSKTLADVVEALIGVYYVAGGKIAANHLMKWIGIHAELDPQEI--- 1217
Query: 177 KAAGKKRKRPQPPFG---------EAQQLEKKIGYTFKNKNLIRET----------VNCS 299
P P+ E + LE +G F+NK + E V+C
Sbjct: 1218 --------PPPKPYNIPESILKGIEFETLEGILGMKFQNKGFLIEAITHASRPSSGVSCY 1269
Query: 300 PRLEILGDAVVDWLMVKHIYTHYPELEVGHFSALLSANVCNAKLGRAIVKYGLYHCINFE 479
RLE +GDAV+D L+ KH++ Y +L G + L +A V N R V+ L+ +
Sbjct: 1270 QRLEFVGDAVLDHLITKHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVRRKLHTHLRHG 1329
Query: 480 ESSEHEVVKKTVKDL-EKYEKDGSRDETI---LLPKVLANFMECIAGAVFIDSGESFPLV 647
S+ + +++ VKD+ E+ K G + PKVL + +E IAGAVF+DSG V
Sbjct: 1330 SSALEKQIREFVKDVREEISKSGFNSFGLGDCKAPKVLGDIIESIAGAVFLDSGYDTSAV 1389
Query: 648 WKVIR----------------------------XXXXXXXXXFPKAATIE--------GV 719
WKV + AT+E GV
Sbjct: 1390 WKVFQPLLEPLVTPETLPMHPIRELQERCQQQAEGLEYKASRAGNVATVEVFVDGVQIGV 1449
Query: 720 KKVTYKRMWR----------IKKKVAGSMQIWEKMNGK--------KLLQLCQERKLPTP 845
+ K+M + +K+K + + EK K L C +R+ P P
Sbjct: 1450 AQNPQKKMAQKLAARNALVVLKEKETAAKKETEKAGDKSNAGFTRQNLNDTCLKRQWPMP 1509
Query: 846 QYRCIQEKGFGNKKMSLYSVQI 911
QYRCI E G + K +Y+V++
Sbjct: 1510 QYRCINEGGPAHAKRFVYAVRV 1531
>ref|XP_004985932.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Setaria italica]
Length = 1933
Score = 95.9 bits (237), Expect = 2e-17
Identities = 99/386 (25%), Positives = 158/386 (40%), Gaps = 84/386 (21%)
Frame = +3
Query: 6 EKDGS--RDDSYESIKPPKVLASLLQCITGAVFIDSGE---SFPLVWKVIRPILEPLEEL 170
++DG D S + K LA +++ + G ++ G+ + + W I L+P E
Sbjct: 1513 QEDGEIEADSSCYRVLSSKTLADVVEALIGVYYVAGGKMAANHLMRWIGIHAELDPQEI- 1571
Query: 171 FDKAAGKKRKRPQPPFGEAQQLEKKI---------GYTFKNKNLIRET----------VN 293
P P+ + + K I G F++K L+ E V+
Sbjct: 1572 ----------PPSKPYIIPESIMKSINFDTLEGALGIKFQSKGLLVEAITHASRPSSGVS 1621
Query: 294 CSPRLEILGDAVVDWLMVKHIYTHYPELEVGHFSALLSANVCNAKLGRAIVKYGLYHCIN 473
C RLE +GDAV+D L+ KH++ Y L G + L +A V N R VK+ L+ +
Sbjct: 1622 CYQRLEFVGDAVLDHLITKHLFFTYTHLPPGRLTDLRAAAVNNENFARIAVKHKLHVHLR 1681
Query: 474 FEESSEHEVVKKTVKDL-EKYEKDGSRDETI---LLPKVLANFMECIAGAVFIDSGESFP 641
S+ +++ VKD+ E+ K G + PKVL + E IAGA+F+DSG +
Sbjct: 1682 HGSSALETQIREFVKDVQEELSKPGFNSFGLGDCKAPKVLGDIFESIAGAIFLDSGYNTS 1741
Query: 642 LVWKVIR----------------------------XXXXXXXXXFPKAATIE-------- 713
+VWKV + AT+E
Sbjct: 1742 IVWKVFQPLLDPMVTPDTLPMHPVRELQERCQQQAEGLEYKASRTANVATVEVFVDGIQI 1801
Query: 714 GVKKVTYKRMWR----------IKKKVAGSMQIWEKMNGKK----------LLQLCQERK 833
GV + K+M + +K+K + + EK + KK L +C R+
Sbjct: 1802 GVGQNPQKKMAQKLAARNALVVLKEKETAAKKDSEKDSEKKNGSQMFTRQTLNDICLRRQ 1861
Query: 834 LPTPQYRCIQEKGFGNKKMSLYSVQI 911
P PQYRCI E G + K +Y+V++
Sbjct: 1862 WPMPQYRCINEGGPAHAKRFVYAVRV 1887
>ref|XP_002458957.1| hypothetical protein SORBIDRAFT_03g043355 [Sorghum bicolor]
gi|241930932|gb|EES04077.1| hypothetical protein
SORBIDRAFT_03g043355 [Sorghum bicolor]
Length = 1651
Score = 95.1 bits (235), Expect = 3e-17
Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 21/224 (9%)
Frame = +3
Query: 54 KVLASLLQCITGAVFIDSGESFP---LVWKVIRPILEPLEELFDKAAGKKRKRPQPPFGE 224
K ++ ++ I GA +++ G L W I + E E++ + + + P
Sbjct: 1184 KTISDCVEAIIGAYYVEGGLKAAFAVLKWLQIETLEE--EQIMEALSSASVRNYLPKVDV 1241
Query: 225 AQQLEKKIGYTFKNKNLIRETVN-----------CSPRLEILGDAVVDWLMVKHIYTHYP 371
+ LE K+GYTF+ K L+ E + C RLE LGDAV+D L+ +H++ +
Sbjct: 1242 VEFLEAKLGYTFQVKGLLIEALTHPSQQESGATYCYQRLEFLGDAVLDILITRHLFLSHK 1301
Query: 372 ELEVGHFSALLSANVCNAKLGRAIVKYGLYHCINFEESSEHEVVKKTVKDLEKYEKDGSR 551
+ + G + L SA+V N + VK+ L+ + + + + V LE S
Sbjct: 1302 DTDEGELTDLRSASVNNENFAQVAVKHNLHQFLQHSSGFLQDQITEYVNSLE----GSSM 1357
Query: 552 DETILL-------PKVLANFMECIAGAVFIDSGESFPLVWKVIR 662
D T LL PKVL + +E IAGA+ IDS LVW+V +
Sbjct: 1358 DRTSLLSSGPSRGPKVLGDIVESIAGAILIDSKLDLDLVWRVFK 1401
>gb|EMT07624.1| Endoribonuclease Dicer-1-like protein [Aegilops tauschii]
Length = 1724
Score = 94.4 bits (233), Expect = 6e-17
Identities = 99/382 (25%), Positives = 153/382 (40%), Gaps = 80/382 (20%)
Frame = +3
Query: 6 EKDGSRDDSYESIKPPKVLASLLQCITGAVFIDSGE---SFPLVWKVIRPILEPLEELFD 176
E DG D S + K LA +++ + G ++ G+ + + W I L+P E
Sbjct: 1310 EIDG--DSSCYRVLSSKTLADVVEALIGVYYVAGGKIAANHLMRWIGIHAELDPQEI--- 1364
Query: 177 KAAGKKRKRPQPPFG---------EAQQLEKKIGYTFKNKNLIRET----------VNCS 299
P P+ + + LE +G F+NK + E V+C
Sbjct: 1365 --------PPPKPYNIPESILKGIDFETLEGVLGMKFQNKGFLIEAITHASRPSSGVSCY 1416
Query: 300 PRLEILGDAVVDWLMVKHIYTHYPELEVGHFSALLSANVCNAKLGRAIVKYGLYHCINFE 479
RLE +GDAV+D L+ KH++ Y +L G + L +A V N R V+ L+ +
Sbjct: 1417 QRLEFVGDAVLDHLITKHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVRRKLHGHLRHG 1476
Query: 480 ESSEHEVVKKTVKDL-EKYEKDGSRDETI---LLPKVLANFMECIAGAVFIDSGESFPLV 647
S+ + +++ VKD+ E+ K G + PKVL + +E IAGAVF+DSG V
Sbjct: 1477 SSALEKQIREFVKDVREEISKSGFNSFGLGDCKAPKVLGDIIESIAGAVFLDSGYDTSAV 1536
Query: 648 WKVIR----------------------------XXXXXXXXXFPKAATIE--------GV 719
WKV + AT+E GV
Sbjct: 1537 WKVFQPLLEPLVTPETLPMHPIRELQERCQQQAEGLEYKASRAGNVATVEVFVDGVQIGV 1596
Query: 720 KKVTYKRMWR----------IKKKVAGSMQIWEKMNGKK--------LLQLCQERKLPTP 845
+ K+M + +K K + + EK K L C R+ P P
Sbjct: 1597 AQNPQKKMAQKLAARNALVVLKDKETAAKKETEKDGDKNNAGFTRQTLNDTCLRRQWPMP 1656
Query: 846 QYRCIQEKGFGNKKMSLYSVQI 911
QYRCI E G + K +Y+V++
Sbjct: 1657 QYRCINEGGPAHAKRFVYAVRV 1678
>ref|XP_004970995.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
3a-like [Setaria italica]
Length = 1662
Score = 94.0 bits (232), Expect = 8e-17
Identities = 69/223 (30%), Positives = 104/223 (46%), Gaps = 20/223 (8%)
Frame = +3
Query: 54 KVLASLLQCITGAVFIDSGESFPL-VWKVIRPILEPLEELFDKAAGKKRK-RPQPPFGEA 227
K ++ ++ + GA ++ G V K ++ +E E+L KA P
Sbjct: 1201 KTISDCVEALIGAYYVGGGLRAAFSVLKWLQIEIETEEDLIVKAMSSASVWNYLPKVDVV 1260
Query: 228 QQLEKKIGYTFKNKNLIRETVN-----------CSPRLEILGDAVVDWLMVKHIYTHYPE 374
+ LE KIGY F K L+ E + C RLE LGDAV+D L+ +H++ + +
Sbjct: 1261 ELLEAKIGYAFSVKGLLIEALTHPSQQESGATYCYQRLEFLGDAVLDILLTRHLFLSHKD 1320
Query: 375 LEVGHFSALLSANVCNAKLGRAIVKYGLYHCINFEESSEHEVVKKTVKDLEKYEKDGSRD 554
++ G + L SA+V N + VKY L+H + + + + V LE S D
Sbjct: 1321 IDEGELTDLRSASVNNENFAQVAVKYNLHHFLQHSSGLLQDQINEYVNGLE----GSSMD 1376
Query: 555 ETILL-------PKVLANFMECIAGAVFIDSGESFPLVWKVIR 662
T LL PKVL + +E IAGAV ID+ LVW V +
Sbjct: 1377 RTSLLSSGPSRGPKVLGDIVESIAGAVLIDTKLDLDLVWGVFK 1419
>tpg|DAA56229.1| TPA: hypothetical protein ZEAMMB73_255524 [Zea mays]
Length = 595
Score = 92.4 bits (228), Expect = 2e-16
Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 22/225 (9%)
Frame = +3
Query: 54 KVLASLLQCITGAVFIDSGESFP---LVWKVIRPILEPLEELFDKAAGKKRKRPQ-PPFG 221
K ++ ++ + GA +++ G L W I +E EEL +A R P
Sbjct: 129 KTISDCVEALIGAYYVEGGLKAAFAVLKWFQIETEIE--EELIMEALSSASVRNYLPKVD 186
Query: 222 EAQQLEKKIGYTFKNKNLIRETVN-----------CSPRLEILGDAVVDWLMVKHIYTHY 368
+ LE K+GYTF+ K L+ E + C RLE LGDAV+D L+ +H++ +
Sbjct: 187 VVELLEAKLGYTFQMKGLLIEALTHSSQQESGATYCYQRLEFLGDAVLDILITRHLFLSH 246
Query: 369 PELEVGHFSALLSANVCNAKLGRAIVKYGLYHCINFEESSEHEVVKKTVKDLEKYEKDGS 548
+ + G + L SA+V N + VK+ L+ + + + + V LE S
Sbjct: 247 KDTDEGELTDLRSASVNNENFAQVAVKHNLHQFLQHSSGFLQDQITEYVNSLE----SSS 302
Query: 549 RDETILL-------PKVLANFMECIAGAVFIDSGESFPLVWKVIR 662
D LL PKVL + +E IAGA+ IDS LVW+V +
Sbjct: 303 MDRASLLSSGPCRGPKVLGDIVESIAGAILIDSKLDLDLVWRVFK 347
>gb|ESW19460.1| hypothetical protein PHAVU_006G127100g [Phaseolus vulgaris]
gi|561020690|gb|ESW19461.1| hypothetical protein
PHAVU_006G127100g [Phaseolus vulgaris]
gi|561020691|gb|ESW19462.1| hypothetical protein
PHAVU_006G127100g [Phaseolus vulgaris]
Length = 1392
Score = 92.0 bits (227), Expect = 3e-16
Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 19/222 (8%)
Frame = +3
Query: 54 KVLASLLQCITGAVFIDSGESFPLV---WKVIRPILE--PLEELFDKAAGKKRKRPQPPF 218
K++A +++ + GA GE L+ W I+ + P E FD K
Sbjct: 1089 KIVADVVEALIGAFLSTGGEKAALMFMDWVGIKVSFDKIPYERHFDIQPDK--------L 1140
Query: 219 GEAQQLEKKIGYTFKNKNLIRETVN-----------CSPRLEILGDAVVDWLMVKHIYTH 365
+ LE ++ Y+F++++L+ E + C RLE LGD+V+D+L+ H+Y
Sbjct: 1141 VNVKFLESQLKYSFRDRSLLVEALTHGSYMLPEVPRCYQRLEFLGDSVLDYLITWHLYNK 1200
Query: 366 YPELEVGHFSALLSANVCNAKLGRAIVKYGLYHCINFEESSEHEVVKKTVKDLEKYEKD- 542
YP + G + + SA+V N +K+GL+ + H + T+ + EK
Sbjct: 1201 YPGMSPGQLTDMRSASVNNDCYAWCTIKHGLHKHVLHASQELHMHIAVTLDNFEKLSSSS 1260
Query: 543 --GSRDETILLPKVLANFMECIAGAVFIDSGESFPLVWKVIR 662
G ET LPKVL + +E +AGA+ +DSG +VW+ IR
Sbjct: 1261 TFGYESET-SLPKVLGDILESLAGAILVDSGYDKEVVWQSIR 1301
>ref|XP_002529460.1| ribonuclease III, putative [Ricinus communis]
gi|223531076|gb|EEF32926.1| ribonuclease III, putative
[Ricinus communis]
Length = 342
Score = 92.0 bits (227), Expect = 3e-16
Identities = 50/152 (32%), Positives = 82/152 (53%), Gaps = 9/152 (5%)
Frame = +3
Query: 234 LEKKIGYTFKNKNLIRETVNCSP--------RLEILGDAVVDWLMVKHIYTHYPELEVGH 389
+EK + YTFKNK L+ E + S RLE +GDA + + H++ YP+L+ GH
Sbjct: 10 VEKILNYTFKNKQLVEEALTHSSYTASPNYQRLEFIGDAALGLALSNHVFLAYPDLDPGH 69
Query: 390 FSALLSANVCNAKLGRAIVKYGLYHCINFEESSEHEVVKKTVKDLEKYEKDG-SRDETIL 566
S L +AN+ KL R VK+GL+ + ++ + VK+ + + E + + T+
Sbjct: 70 LSLLRAANISTEKLARVAVKHGLFRFLRHNATALDDKVKEFSDAVLREEDEAVAHGGTVK 129
Query: 567 LPKVLANFMECIAGAVFIDSGESFPLVWKVIR 662
PKVLA+ +E +A AV++D +W + R
Sbjct: 130 APKVLADIVESVAAAVYVDVNFDLQRLWVIFR 161
>gb|ESW19463.1| hypothetical protein PHAVU_006G127200g [Phaseolus vulgaris]
gi|561020693|gb|ESW19464.1| hypothetical protein
PHAVU_006G127200g [Phaseolus vulgaris]
Length = 1388
Score = 91.7 bits (226), Expect = 4e-16
Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Frame = +3
Query: 54 KVLASLLQCITGAVFIDSGESFPLV---WKVIRPILEPLEELFDKAAGKKRKRPQPP-FG 221
K++A +++ + GA GE L+ W I+ F+K K+ QP
Sbjct: 1088 KIIADVVEALIGAFLSSGGEKAALLFMDWVGIKMS-------FNKIPYKRHFDIQPEKLV 1140
Query: 222 EAQQLEKKIGYTFKNKNLIRETVN-----------CSPRLEILGDAVVDWLMVKHIYTHY 368
LE ++ Y+F ++ L+ E + C RLE LGD+V+D+L+ +H+Y Y
Sbjct: 1141 HVSHLESQLKYSFHDRTLLVEALTHGSYMLPEIPRCYQRLEFLGDSVLDYLITRHLYNEY 1200
Query: 369 PELEVGHFSALLSANVCNAKLGRAIVKYGLYHCINFEESSEHEVVKKTVKDLEKYEKD-- 542
P + G + + SA+V N + + +GL+ + H+ + T+ + +K
Sbjct: 1201 PGMSPGQLTDMRSASVNNDCYAWSAINHGLHKHVLHASQELHKHIAITLANFDKLSSSST 1260
Query: 543 -GSRDETILLPKVLANFMECIAGAVFIDSGESFPLVWKVIR 662
G ET LPKVL + +E +AGA+ +DSG + +VW+ IR
Sbjct: 1261 FGFGSET-SLPKVLGDIIESLAGAILVDSGFNIEVVWQSIR 1300
>ref|XP_002979043.1| hypothetical protein SELMODRAFT_444049 [Selaginella moellendorffii]
gi|300153361|gb|EFJ20000.1| hypothetical protein
SELMODRAFT_444049 [Selaginella moellendorffii]
Length = 1686
Score = 91.3 bits (225), Expect = 5e-16
Identities = 64/218 (29%), Positives = 111/218 (50%), Gaps = 16/218 (7%)
Frame = +3
Query: 54 KVLASLLQCITGAVFIDSGESFPLVWKVIRPILEPLEELFD---KAAGKKRKRPQPPFGE 224
K LA +++ + GA SG P ++++ + +E FD A+ ++ P F
Sbjct: 1432 KALADVVEALIGAYLATSGP--PSAMELMKQLDIDIE--FDIGLLASARQASLPAESFQH 1487
Query: 225 AQ----QLEKKIGYTFKNKNLIRETVN---------CSPRLEILGDAVVDWLMVKHIYTH 365
Q LE K+ Y F+N++L+ E + C RLE LGD V+D+L+ +H++
Sbjct: 1488 LQASLESLEHKLQYKFQNRSLLVEAITHASQPNCLLCYQRLEFLGDGVLDFLVSRHLFET 1547
Query: 366 YPELEVGHFSALLSANVCNAKLGRAIVKYGLYHCINFEESSEHEVVKKTVKDLEKYEKDG 545
+P L G + L SA V N R +V++GL+ + ++K V+++ K + D
Sbjct: 1548 HPGLPPGTLTDLRSAAVNNKWFARLVVRHGLHQHLQHGSVELDCEIRKFVQNV-KEKPDA 1606
Query: 546 SRDETILLPKVLANFMECIAGAVFIDSGESFPLVWKVI 659
S E + PKVL + +E I GA+F+D+ +W+V+
Sbjct: 1607 SCFEDLSAPKVLGDLLESITGAIFVDTNFDLERLWRVV 1644
>ref|XP_002865277.1| hypothetical protein ARALYDRAFT_917014 [Arabidopsis lyrata subsp.
lyrata] gi|297311112|gb|EFH41536.1| hypothetical protein
ARALYDRAFT_917014 [Arabidopsis lyrata subsp. lyrata]
Length = 786
Score = 90.9 bits (224), Expect = 6e-16
Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 4/147 (2%)
Frame = +3
Query: 228 QQLEKKIGYTFKNKNLIRETVNCSPR---LEILGDAVVDWLMVKHIYTHYPELEVGHFSA 398
+ +EK + Y+FKNK L++E + SPR LE LGD+V++ + +I+ YP L++
Sbjct: 5 ETVEKILNYSFKNKTLLKEAITLSPRFKRLEFLGDSVLEVALANYIHHAYPNLKLQELCD 64
Query: 399 LLSANVCNAKLGRAIVKYGLYHCINFEESSE-HEVVKKTVKDLEKYEKDGSRDETILLPK 575
L +ANV N K RA VK+ LY I E+SS E +K+ + + K + + PK
Sbjct: 65 LRTANVNNEKFARATVKHNLYQFIIGEKSSSPSEKIKEFSEAVSKEDVPVPYGGLVEAPK 124
Query: 576 VLANFMECIAGAVFIDSGESFPLVWKV 656
VL + +E IAGAV+ID W+V
Sbjct: 125 VLGDIVESIAGAVYIDVDFDVQRFWEV 151
Score = 72.4 bits (176), Expect = 2e-10
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Frame = +3
Query: 234 LEKKIGYTFKNKNLIRE----TVNCSPRLEILGDAVVDWLMVKHIYTHYPELEVGHFSAL 401
+EK + Y F NKNL++E T + +L +G A + + HIY YP E L
Sbjct: 475 VEKILNYVFTNKNLLKEALRQTSSLFQKLRFVGRAALVLAITNHIYLRYPNFEPRELELL 534
Query: 402 LSANVCNAKLGRAIVKYGLYHCI--NFEESSEHEVVKKTV-KDLEKYEKDGSRDETILLP 572
N CN L R VK+ ++ F+ + E K V K+ + DG + T
Sbjct: 535 QRGNTCNKTLARVAVKHNIHQFFIGQFKSEKKIEAFSKVVGKEDDPVPSDGRSERT---T 591
Query: 573 KVLANFMECIAGAVFIDSGESFPLVWKVIR 662
VL++ +E +AGAV+ID +W+ R
Sbjct: 592 NVLSDLVESVAGAVYIDMNFDIKRLWESFR 621
>gb|EPS71118.1| hypothetical protein M569_03642, partial [Genlisea aurea]
Length = 329
Score = 90.5 bits (223), Expect = 8e-16
Identities = 50/150 (33%), Positives = 85/150 (56%), Gaps = 8/150 (5%)
Frame = +3
Query: 234 LEKKIGYTFKNKNLIRETV---NCSP-----RLEILGDAVVDWLMVKHIYTHYPELEVGH 389
LE+ +GY FKNK L+RE++ +C+ RLE LGDA + + ++Y YPE++ G
Sbjct: 1 LEEILGYRFKNKELLRESLTHPSCTDHESYERLEYLGDACLSMAISDYLYHRYPEVDPGK 60
Query: 390 FSALLSANVCNAKLGRAIVKYGLYHCINFEESSEHEVVKKTVKDLEKYEKDGSRDETILL 569
+ + SANV KL R V++GLY I S + V++ + + + ++
Sbjct: 61 LTVVRSANVSTEKLARVAVRHGLYKHIQLSSPSLDKKVEEFAIKVLQENEPMIHGGSVKA 120
Query: 570 PKVLANFMECIAGAVFIDSGESFPLVWKVI 659
PKVLA+ +E +A A+++D+ L+W+V+
Sbjct: 121 PKVLADIVESVAAAIYVDANYDLALMWRVM 150
>ref|XP_004494885.1| PREDICTED: endoribonuclease Dicer homolog 1-like isoform X2 [Cicer
arietinum]
Length = 1892
Score = 90.1 bits (222), Expect = 1e-15
Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 19/232 (8%)
Frame = +3
Query: 24 DDSYESIKPPKVLASLLQCITGAVFIDSGESFP---LVWKVIRPILEPLEELFDKAAGKK 194
D S + K LA +++ + G +++ G++ + W I ++P E + K
Sbjct: 1486 DSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIHIEIDPDEM---ECTRKP 1542
Query: 195 RKRPQPPFGEAQ--QLEKKIGYTFKNKNLIRET----------VNCSPRLEILGDAVVDW 338
P LE + FK+K L+ E+ V+C RLE +GDAV+D
Sbjct: 1543 SDVPDSILRSVDFDALEGALNIRFKDKGLLIESITHASRPSSGVSCYQRLEFVGDAVLDH 1602
Query: 339 LMVKHIYTHYPELEVGHFSALLSANVCNAKLGRAIVKYGLYHCINFEESSEHEVVKKTVK 518
L+ +H++ Y +L G + L +A V N R VK+ L+ + S+ + +K+ VK
Sbjct: 1603 LITRHLFFSYTDLPPGRLTDLRAAAVNNENFARVAVKHNLHMHLRHGSSALEKQIKEFVK 1662
Query: 519 DLE-KYEKDGSRDETI---LLPKVLANFMECIAGAVFIDSGESFPLVWKVIR 662
+++ + K G + PKVL + +E IAGA+F+DSG + +VWKV +
Sbjct: 1663 EVQNELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRNTAVVWKVFQ 1714
>ref|XP_004494884.1| PREDICTED: endoribonuclease Dicer homolog 1-like isoform X1 [Cicer
arietinum]
Length = 1895
Score = 90.1 bits (222), Expect = 1e-15
Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 19/232 (8%)
Frame = +3
Query: 24 DDSYESIKPPKVLASLLQCITGAVFIDSGESFP---LVWKVIRPILEPLEELFDKAAGKK 194
D S + K LA +++ + G +++ G++ + W I ++P E + K
Sbjct: 1489 DSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIHIEIDPDEM---ECTRKP 1545
Query: 195 RKRPQPPFGEAQ--QLEKKIGYTFKNKNLIRET----------VNCSPRLEILGDAVVDW 338
P LE + FK+K L+ E+ V+C RLE +GDAV+D
Sbjct: 1546 SDVPDSILRSVDFDALEGALNIRFKDKGLLIESITHASRPSSGVSCYQRLEFVGDAVLDH 1605
Query: 339 LMVKHIYTHYPELEVGHFSALLSANVCNAKLGRAIVKYGLYHCINFEESSEHEVVKKTVK 518
L+ +H++ Y +L G + L +A V N R VK+ L+ + S+ + +K+ VK
Sbjct: 1606 LITRHLFFSYTDLPPGRLTDLRAAAVNNENFARVAVKHNLHMHLRHGSSALEKQIKEFVK 1665
Query: 519 DLE-KYEKDGSRDETI---LLPKVLANFMECIAGAVFIDSGESFPLVWKVIR 662
+++ + K G + PKVL + +E IAGA+F+DSG + +VWKV +
Sbjct: 1666 EVQNELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRNTAVVWKVFQ 1717
>ref|XP_002991516.1| hypothetical protein SELMODRAFT_448444 [Selaginella moellendorffii]
gi|300140718|gb|EFJ07438.1| hypothetical protein
SELMODRAFT_448444 [Selaginella moellendorffii]
Length = 1719
Score = 90.1 bits (222), Expect = 1e-15
Identities = 63/218 (28%), Positives = 111/218 (50%), Gaps = 16/218 (7%)
Frame = +3
Query: 54 KVLASLLQCITGAVFIDSGESFPLVWKVIRPILEPLEELFD---KAAGKKRKRPQPPFGE 224
K LA +++ + GA SG P ++++ + +E FD A+ ++ P F
Sbjct: 1401 KALADVVEALIGAYLATSGP--PSAMELMKQLGIDIE--FDIGLLASARQASLPAESFQH 1456
Query: 225 AQ----QLEKKIGYTFKNKNLIRETVN---------CSPRLEILGDAVVDWLMVKHIYTH 365
Q LE K+ Y F+N++L+ E + C RLE LGD V+D+L+ +H++
Sbjct: 1457 LQASLESLEHKLQYKFQNRSLLVEAITHASQPNCLLCYQRLEFLGDGVLDFLVSRHLFET 1516
Query: 366 YPELEVGHFSALLSANVCNAKLGRAIVKYGLYHCINFEESSEHEVVKKTVKDLEKYEKDG 545
+P L G + L SA V N R ++++GL+ + ++K V+++ K + D
Sbjct: 1517 HPGLPPGTLTDLRSAAVNNKWFARLVLRHGLHQHLQHGSVELDCEIRKFVQNV-KEKPDA 1575
Query: 546 SRDETILLPKVLANFMECIAGAVFIDSGESFPLVWKVI 659
S E + PKVL + +E I GA+F+D+ +W+V+
Sbjct: 1576 SCFEDLSAPKVLGDLLESITGAIFVDTNFDLEKLWRVV 1613
>gb|ABD32724.1| Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Ribonuclease
III, bacterial [Medicago truncatula]
Length = 1939
Score = 89.7 bits (221), Expect = 1e-15
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 18/231 (7%)
Frame = +3
Query: 24 DDSYESIKPPKVLASLLQCITGAVFIDSGESFP---LVWKVIRPILEPLE-ELFDKAAGK 191
D S + K LA +++ + G +++ G++ + W I ++P E E K +
Sbjct: 1532 DSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIHIEIDPDEMECITKPSNV 1591
Query: 192 KRKRPQPPFGEAQQLEKKIGYTFKNKNLIRET----------VNCSPRLEILGDAVVDWL 341
+ +A LE + FK+K L+ E+ V+C RLE +GDAV+D L
Sbjct: 1592 PDSILRSVDFDA--LEGALNIKFKDKGLLIESITHASRPSSGVSCYQRLEFVGDAVLDHL 1649
Query: 342 MVKHIYTHYPELEVGHFSALLSANVCNAKLGRAIVKYGLYHCINFEESSEHEVVKKTVKD 521
+ +H++ Y +L G + L +A V N R VK+ L+ + S+ + +K VK+
Sbjct: 1650 ITRHLFFSYTDLPPGRLTDLRAAAVNNENFARVTVKHNLHLHLRHGSSALEKQIKDFVKE 1709
Query: 522 L-EKYEKDGSRDETI---LLPKVLANFMECIAGAVFIDSGESFPLVWKVIR 662
+ ++ K G + PKVL + +E IAGA+F+DSG + +VWKV +
Sbjct: 1710 VQDELSKPGFNSFGLGDCKAPKVLGDILESIAGAIFLDSGRNTAVVWKVFQ 1760
>ref|XP_003626620.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355501635|gb|AES82838.1| Endoribonuclease Dicer-like
protein [Medicago truncatula]
Length = 1965
Score = 89.7 bits (221), Expect = 1e-15
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 18/231 (7%)
Frame = +3
Query: 24 DDSYESIKPPKVLASLLQCITGAVFIDSGESFP---LVWKVIRPILEPLE-ELFDKAAGK 191
D S + K LA +++ + G +++ G++ + W I ++P E E K +
Sbjct: 1558 DSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIHIEIDPDEMECITKPSNV 1617
Query: 192 KRKRPQPPFGEAQQLEKKIGYTFKNKNLIRET----------VNCSPRLEILGDAVVDWL 341
+ +A LE + FK+K L+ E+ V+C RLE +GDAV+D L
Sbjct: 1618 PDSILRSVDFDA--LEGALNIKFKDKGLLIESITHASRPSSGVSCYQRLEFVGDAVLDHL 1675
Query: 342 MVKHIYTHYPELEVGHFSALLSANVCNAKLGRAIVKYGLYHCINFEESSEHEVVKKTVKD 521
+ +H++ Y +L G + L +A V N R VK+ L+ + S+ + +K VK+
Sbjct: 1676 ITRHLFFSYTDLPPGRLTDLRAAAVNNENFARVTVKHNLHLHLRHGSSALEKQIKDFVKE 1735
Query: 522 L-EKYEKDGSRDETI---LLPKVLANFMECIAGAVFIDSGESFPLVWKVIR 662
+ ++ K G + PKVL + +E IAGA+F+DSG + +VWKV +
Sbjct: 1736 VQDELSKPGFNSFGLGDCKAPKVLGDILESIAGAIFLDSGRNTAVVWKVFQ 1786
>ref|XP_001766164.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens] gi|162682596|gb|EDQ69013.1|
dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens]
Length = 1460
Score = 89.7 bits (221), Expect = 1e-15
Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 15/161 (9%)
Frame = +3
Query: 222 EAQQLEKKIGYTFKNK-----------NLIRETVNCSPRLEILGDAVVDWLMVKHIYTHY 368
+ + EK+IGYTFKNK N++ + + C RLE LGDAV+D+L+ +H++T +
Sbjct: 1223 DLKAFEKRIGYTFKNKYLPLEALTHFSNMVGDQIRCYQRLEFLGDAVLDFLLTRHLFTSH 1282
Query: 369 PELEVGHFSALLSANVCNAKLGRAIVKYGLYHCINFEESSEHEVVKKTVKDLEKYEKDGS 548
P G ++L +A+V N + R VK+ L+ + +++ VK E + D
Sbjct: 1283 PTSTPGLLTSLRTASVNNERFARVAVKHRLHCYLRHGSGRLLHQIEEFVKSFEAADDDQK 1342
Query: 549 RDETIL----LPKVLANFMECIAGAVFIDSGESFPLVWKVI 659
L PKVL + +E IAGA+ +D+ VW V+
Sbjct: 1343 NSSFGLNGLEAPKVLGDLVESIAGAILVDTCFDLDKVWAVM 1383
>ref|NP_197532.3| dicer-like protein 4 [Arabidopsis thaliana]
gi|322510021|sp|P84634.2|DCL4_ARATH RecName:
Full=Dicer-like protein 4 gi|73672051|gb|AAZ80387.1|
dicer-like 4 [Arabidopsis thaliana]
gi|332005447|gb|AED92830.1| dicer-like protein 4
[Arabidopsis thaliana]
Length = 1702
Score = 89.4 bits (220), Expect = 2e-15
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 13/215 (6%)
Frame = +3
Query: 54 KVLASLLQCITGAVFIDSGESFP---LVWKVIRPILEPLEELFDKAAGKKRKRPQPPFGE 224
K +A +++ + GA +DSG L W + E L+ + D +R P
Sbjct: 1233 KTIADVVEALVGAFLVDSGFKGAVKFLKWIGVNVDFESLQ-VQDACIASRRYLPLTTRNN 1291
Query: 225 AQQLEKKIGYTFKNKNLI----------RETVNCSPRLEILGDAVVDWLMVKHIYTHYPE 374
+ LE ++ Y F +K L+ R C RLE LGDAV+D+LM + +T +P+
Sbjct: 1292 LETLENQLDYKFLHKGLLVQAFIHPSYNRHGGGCYQRLEFLGDAVLDYLMTSYFFTVFPK 1351
Query: 375 LEVGHFSALLSANVCNAKLGRAIVKYGLYHCINFEESSEHEVVKKTVKDLEKYEKDGSRD 554
L+ G + L S +V N L V + L + E HEV++ L +
Sbjct: 1352 LKPGQLTDLRSLSVNNEALANVAVSFSLKRFLFCESIYLHEVIEDYTNFLASSPLASGQS 1411
Query: 555 ETILLPKVLANFMECIAGAVFIDSGESFPLVWKVI 659
E PKVL + +E GA+F+D G + VW ++
Sbjct: 1412 EGPRCPKVLGDLVESCLGALFLDCGFNLNHVWTMM 1446