BLASTX nr result

ID: Ephedra27_contig00012849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00012849
         (437 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001058914.1| Os07g0154300 [Oryza sativa Japonica Group] g...    56   6e-06
gb|ABK25746.1| unknown [Picea sitchensis] gi|148910510|gb|ABR183...    56   6e-06

>ref|NP_001058914.1| Os07g0154300 [Oryza sativa Japonica Group]
           gi|50508821|dbj|BAD31594.1| unknown protein [Oryza
           sativa Japonica Group] gi|113610450|dbj|BAF20828.1|
           Os07g0154300 [Oryza sativa Japonica Group]
           gi|125557277|gb|EAZ02813.1| hypothetical protein
           OsI_24938 [Oryza sativa Indica Group]
           gi|125599156|gb|EAZ38732.1| hypothetical protein
           OsJ_23133 [Oryza sativa Japonica Group]
           gi|215768562|dbj|BAH00791.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 76

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 23/36 (63%), Positives = 29/36 (80%)
 Frame = +3

Query: 3   CKPCLESGRQAIDRHLDPDYDPDEATAAPTLTYQPI 110
           CKPCL+SGR+A+DR LDP+YDPDE TAA     +P+
Sbjct: 25  CKPCLDSGRRAMDRALDPNYDPDEPTAAGAAANEPL 60


>gb|ABK25746.1| unknown [Picea sitchensis] gi|148910510|gb|ABR18330.1| unknown
           [Picea sitchensis]
          Length = 77

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/47 (55%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
 Frame = +3

Query: 3   CKPCLESGRQAIDRHLDPDYDPDE--ATAAPTLTYQPIPDQDQPAAS 137
           CKPCLE+GR AIDR LDP+YDPDE    ++    YQ +PDQ+  + S
Sbjct: 25  CKPCLEAGRNAIDRSLDPNYDPDENIDRSSGLPAYQALPDQEPSSIS 71


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