BLASTX nr result
ID: Ephedra27_contig00012783
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00012783
(1072 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE77847.1| unknown [Picea sitchensis] 89 3e-15
ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Me... 86 3e-14
ref|XP_002302436.1| hypothetical protein POPTR_0002s12730g [Popu... 86 3e-14
ref|XP_006434757.1| hypothetical protein CICLE_v10002377mg [Citr... 83 2e-13
ref|XP_002282478.1| PREDICTED: protein DCL, chloroplastic [Vitis... 83 2e-13
gb|EMJ27722.1| hypothetical protein PRUPE_ppa024709mg, partial [... 82 3e-13
ref|XP_004141276.1| PREDICTED: protein DCL, chloroplastic-like [... 82 4e-13
emb|CAD12248.1| DCL protein [Coffea arabica] 82 4e-13
ref|XP_006473317.1| PREDICTED: protein DCL, chloroplastic-like [... 81 6e-13
gb|EOY14369.1| Uncharacterized protein TCM_033766 [Theobroma cacao] 81 6e-13
emb|CBI21428.3| unnamed protein product [Vitis vinifera] 81 6e-13
ref|NP_001235676.1| uncharacterized protein LOC100527410 [Glycin... 81 6e-13
ref|XP_006649071.1| PREDICTED: protein DCL, chloroplastic-like [... 81 8e-13
gb|EPS63154.1| hypothetical protein M569_11634, partial [Genlise... 81 8e-13
ref|XP_004954026.1| PREDICTED: protein DCL, chloroplastic-like [... 81 8e-13
ref|NP_001235407.1| uncharacterized protein LOC100306718 [Glycin... 81 8e-13
gb|ABC47855.1| defective chloroplast and leaves protein [Glycine... 81 8e-13
gb|EXB56512.1| hypothetical protein L484_008893 [Morus notabilis] 80 1e-12
ref|XP_002326941.1| predicted protein [Populus trichocarpa] gi|5... 80 1e-12
ref|XP_006855235.1| hypothetical protein AMTR_s00051p00224060 [A... 80 1e-12
>gb|ADE77847.1| unknown [Picea sitchensis]
Length = 231
Score = 89.0 bits (219), Expect = 3e-15
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = +2
Query: 386 VLPRTLREILHSRYMVGQSLSETDKSLVENVLRHHPHYEEKVGNGLQGIKIGKNPDFPDT 565
+L +LR ILH+RY +G + + DKS+V + L +HP ++K G G++ I IG NP FP +
Sbjct: 126 ILFHSLRGILHNRYRMGDIVRKEDKSIVMHALLYHPRSKDKTGVGIEEIMIGSNPAFPKS 185
Query: 566 RCFMVERKDGSCVDFSYWKCLSRL 637
RCF+V RKDGS DFSY KC+ L
Sbjct: 186 RCFVVVRKDGSREDFSYHKCMRGL 209
>ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
gi|355512499|gb|AES94122.1| DNA-directed RNA polymerase
subunit beta [Medicago truncatula]
Length = 1687
Score = 85.9 bits (211), Expect = 3e-14
Identities = 53/144 (36%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Frame = +2
Query: 215 SYVQNDKVSIPPKESNRSSNHILGDGWQMQSKN-----KDTKSLKSILHVSSKVKNSEGK 379
S+ Q D+ P+ SS D +SKN K+ K KS+L +N
Sbjct: 1479 SFNQMDQEINIPQSRKYSSGKCSSD---FRSKNGGYTPKEPKQWKSVL------RNFMTA 1529
Query: 380 QEVLPRTL-REILHSRYMVGQSLSETDKSLVENVLRHHPHYEEKVGNGLQGIKIGKNPDF 556
++ T ++ ++Y + ++LSETDK + VL HP +EK G+G Q IK+G +P+F
Sbjct: 1530 NDIQRLTFDARVILNKYQIDETLSETDKLTIMKVLHFHPRRDEKFGSGPQNIKVGWHPEF 1589
Query: 557 PDTRCFMVERKDGSCVDFSYWKCL 628
D+RCF + RKDGS DFSY KC+
Sbjct: 1590 TDSRCFFIIRKDGSVEDFSYRKCI 1613
>ref|XP_002302436.1| hypothetical protein POPTR_0002s12730g [Populus trichocarpa]
gi|222844162|gb|EEE81709.1| hypothetical protein
POPTR_0002s12730g [Populus trichocarpa]
Length = 212
Score = 85.5 bits (210), Expect = 3e-14
Identities = 40/81 (49%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Frame = +2
Query: 401 LREILHS-RYMVGQSLS-ETDKSLVENVLRHHPHYEEKVGNGLQGIKIGKNPDFPDTRCF 574
+R ILHS +Y G LS E D+++V+ +L +HP ++ K+G G+ I +G +PDF D+RC
Sbjct: 113 VRMILHSDKYESGDRLSQEHDRTIVDRLLAYHPDFDNKIGCGIDYITVGYHPDFADSRCL 172
Query: 575 MVERKDGSCVDFSYWKCLSRL 637
+ RKDG VDFSYWKCL L
Sbjct: 173 FIVRKDGQAVDFSYWKCLKGL 193
>ref|XP_006434757.1| hypothetical protein CICLE_v10002377mg [Citrus clementina]
gi|557536879|gb|ESR47997.1| hypothetical protein
CICLE_v10002377mg [Citrus clementina]
Length = 227
Score = 82.8 bits (203), Expect = 2e-13
Identities = 40/81 (49%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Frame = +2
Query: 401 LREILHS-RYMVGQSLS-ETDKSLVENVLRHHPHYEEKVGNGLQGIKIGKNPDFPDTRCF 574
+R ILHS RY G LS E +++++E +L +HP +E+K+G G+ I IG +PDF +RC
Sbjct: 119 VRMILHSGRYESGVRLSPEHERTILERLLPYHPEFEKKIGCGIDYITIGYHPDFESSRCL 178
Query: 575 MVERKDGSCVDFSYWKCLSRL 637
+ RKDG VDFSYWKC+ L
Sbjct: 179 FIVRKDGELVDFSYWKCIKGL 199
>ref|XP_002282478.1| PREDICTED: protein DCL, chloroplastic [Vitis vinifera]
gi|147773590|emb|CAN69898.1| hypothetical protein
VITISV_032063 [Vitis vinifera]
Length = 205
Score = 82.8 bits (203), Expect = 2e-13
Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Frame = +2
Query: 401 LREILHS-RYMVGQSLS-ETDKSLVENVLRHHPHYEEKVGNGLQGIKIGKNPDFPDTRCF 574
+R ILHS +Y G+ LS E +K ++E +L +HP YE K+G+G+ I +G +P+F +RC
Sbjct: 101 VRMILHSGKYRSGERLSPEHEKIILERLLPYHPGYERKIGSGIDYITVGYHPEFESSRCL 160
Query: 575 MVERKDGSCVDFSYWKCL 628
+ RKDG VDFSYWKC+
Sbjct: 161 FIVRKDGELVDFSYWKCI 178
>gb|EMJ27722.1| hypothetical protein PRUPE_ppa024709mg, partial [Prunus persica]
Length = 146
Score = 82.4 bits (202), Expect = 3e-13
Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 6/97 (6%)
Frame = +2
Query: 356 KVKNSEGK--QEVLPRTL--REILHS-RYMVGQSLS-ETDKSLVENVLRHHPHYEEKVGN 517
K K+ EG+ ++ P L +EILHS RYM G+ LS E +K +VE +L HHPH E+K+G
Sbjct: 25 KWKDKEGEILNDIEPLILLAKEILHSDRYMDGERLSAEDEKVVVERLLAHHPHSEDKIGC 84
Query: 518 GLQGIKIGKNPDFPDTRCFMVERKDGSCVDFSYWKCL 628
G+ I + ++P F +RC V R DG +DFSY KCL
Sbjct: 85 GIDSIMVDRHPQFRHSRCLFVIRTDGIWIDFSYQKCL 121
>ref|XP_004141276.1| PREDICTED: protein DCL, chloroplastic-like [Cucumis sativus]
Length = 196
Score = 82.0 bits (201), Expect = 4e-13
Identities = 44/97 (45%), Positives = 62/97 (63%), Gaps = 6/97 (6%)
Frame = +2
Query: 356 KVKNSE----GKQEVLPRTLREILHS-RYMVGQSLS-ETDKSLVENVLRHHPHYEEKVGN 517
K KN E G E + +EILHS RY G+ L+ E ++++V+ +L HHPH E+K+G
Sbjct: 76 KWKNQEEEILGDIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGC 135
Query: 518 GLQGIKIGKNPDFPDTRCFMVERKDGSCVDFSYWKCL 628
GL+ I + ++P F +RCF V R DG +DFSY KCL
Sbjct: 136 GLESIMVDRHPQFRQSRCFFVIRTDGGWIDFSYQKCL 172
>emb|CAD12248.1| DCL protein [Coffea arabica]
Length = 224
Score = 82.0 bits (201), Expect = 4e-13
Identities = 40/81 (49%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Frame = +2
Query: 401 LREILHS-RYMVGQSLS-ETDKSLVENVLRHHPHYEEKVGNGLQGIKIGKNPDFPDTRCF 574
+R ILHS +Y G LS E +++++E VL +HP E+K+G+G+ I IG +PDF +RC
Sbjct: 120 VRMILHSGKYESGDRLSPEHERTILERVLPYHPQCEKKIGSGVDYITIGYHPDFDRSRCL 179
Query: 575 MVERKDGSCVDFSYWKCLSRL 637
+ RKDG VDFSYWKC+ L
Sbjct: 180 FIVRKDGELVDFSYWKCIKGL 200
>ref|XP_006473317.1| PREDICTED: protein DCL, chloroplastic-like [Citrus sinensis]
Length = 227
Score = 81.3 bits (199), Expect = 6e-13
Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Frame = +2
Query: 401 LREILHS-RYMVGQSLS-ETDKSLVENVLRHHPHYEEKVGNGLQGIKIGKNPDFPDTRCF 574
+R ILHS RY G LS E +++++E +L +HP +++K+G G+ I IG +PDF +RC
Sbjct: 119 VRMILHSGRYESGVRLSPEHERTILERLLPYHPEFKKKIGCGIDYITIGYHPDFESSRCL 178
Query: 575 MVERKDGSCVDFSYWKCLSRL 637
+ RKDG VDFSYWKC+ L
Sbjct: 179 FIVRKDGELVDFSYWKCIKGL 199
>gb|EOY14369.1| Uncharacterized protein TCM_033766 [Theobroma cacao]
Length = 197
Score = 81.3 bits (199), Expect = 6e-13
Identities = 39/77 (50%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
Frame = +2
Query: 404 REILHS-RYMVGQSLS-ETDKSLVENVLRHHPHYEEKVGNGLQGIKIGKNPDFPDTRCFM 577
+EILHS RYM G+ L+ E ++++VE +L HHPH E+K+G GL I + ++P F +RC
Sbjct: 96 KEILHSDRYMDGERLTVEDEETVVEKLLSHHPHSEDKIGCGLDSIMVDRHPQFRHSRCLF 155
Query: 578 VERKDGSCVDFSYWKCL 628
V R DG +DFSY KCL
Sbjct: 156 VVRTDGGWIDFSYQKCL 172
>emb|CBI21428.3| unnamed protein product [Vitis vinifera]
Length = 103
Score = 81.3 bits (199), Expect = 6e-13
Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
Frame = +2
Query: 410 ILHS-RYMVGQSLS-ETDKSLVENVLRHHPHYEEKVGNGLQGIKIGKNPDFPDTRCFMVE 583
ILHS +Y G+ LS E +K ++E +L +HP YE K+G+G+ I +G +P+F +RC +
Sbjct: 2 ILHSGKYRSGERLSPEHEKIILERLLPYHPGYERKIGSGIDYITVGYHPEFESSRCLFIV 61
Query: 584 RKDGSCVDFSYWKCL 628
RKDG VDFSYWKC+
Sbjct: 62 RKDGELVDFSYWKCI 76
>ref|NP_001235676.1| uncharacterized protein LOC100527410 [Glycine max]
gi|255632284|gb|ACU16500.1| unknown [Glycine max]
Length = 206
Score = 81.3 bits (199), Expect = 6e-13
Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Frame = +2
Query: 401 LREILHS-RYMVGQSLS-ETDKSLVENVLRHHPHYEEKVGNGLQGIKIGKNPDFPDTRCF 574
+R ILHS +Y G LS E +K+++E +L HP +E+K+G+G+ I IG +PDF +RC
Sbjct: 102 VRMILHSGQYDNGDKLSPEHEKTIIEKLLPFHPEFEKKIGSGVDYITIGYHPDFERSRCL 161
Query: 575 MVERKDGSCVDFSYWKCLSRL 637
+ R+DG VDFSYWKC+ L
Sbjct: 162 FIVRQDGELVDFSYWKCIKGL 182
>ref|XP_006649071.1| PREDICTED: protein DCL, chloroplastic-like [Oryza brachyantha]
Length = 161
Score = 80.9 bits (198), Expect = 8e-13
Identities = 38/81 (46%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Frame = +2
Query: 401 LREILHS-RYMVGQSLS-ETDKSLVENVLRHHPHYEEKVGNGLQGIKIGKNPDFPDTRCF 574
+R ILHS +Y G LS E +K+++E +L +HP YE+K+G G+ I +G +P+F ++RC
Sbjct: 53 VRMILHSAKYENGDRLSPEHEKAILERLLPYHPQYEKKIGCGIDYITVGLHPEFENSRCL 112
Query: 575 MVERKDGSCVDFSYWKCLSRL 637
+ RKDG VDFS+WKC+ L
Sbjct: 113 FIVRKDGEQVDFSFWKCIKGL 133
>gb|EPS63154.1| hypothetical protein M569_11634, partial [Genlisea aurea]
Length = 125
Score = 80.9 bits (198), Expect = 8e-13
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Frame = +2
Query: 401 LREILHS-RYMVGQSLSETDKSLVEN-VLRHHPHYEEKVGNGLQGIKIGKNPDFPDTRCF 574
+R ILHS RY +G LS + ++ N +L +HPHYE K+G+G+ +G +P F ++C
Sbjct: 25 VRMILHSGRYEIGDRLSSVHQGMILNKLLPYHPHYESKIGSGVDHFVVGYHPTFESSKCL 84
Query: 575 MVERKDGSCVDFSYWKCLSRL 637
+ R+DG VDFSYWKC+ L
Sbjct: 85 FIVRRDGEVVDFSYWKCIKGL 105
>ref|XP_004954026.1| PREDICTED: protein DCL, chloroplastic-like [Setaria italica]
Length = 241
Score = 80.9 bits (198), Expect = 8e-13
Identities = 38/81 (46%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Frame = +2
Query: 401 LREILHS-RYMVGQSLS-ETDKSLVENVLRHHPHYEEKVGNGLQGIKIGKNPDFPDTRCF 574
+R ILHS +Y G LS E +K+++E +L +HP YE+K+G G+ I +G +P+F ++RC
Sbjct: 138 VRMILHSGKYESGDRLSPEHEKAILERLLPYHPQYEKKIGCGIDYITVGLHPEFENSRCL 197
Query: 575 MVERKDGSCVDFSYWKCLSRL 637
+ RKDG VDFS+WKC+ L
Sbjct: 198 FIVRKDGERVDFSFWKCVKGL 218
>ref|NP_001235407.1| uncharacterized protein LOC100306718 [Glycine max]
gi|255629361|gb|ACU15025.1| unknown [Glycine max]
Length = 212
Score = 80.9 bits (198), Expect = 8e-13
Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Frame = +2
Query: 401 LREILHS-RYMVGQSLS-ETDKSLVENVLRHHPHYEEKVGNGLQGIKIGKNPDFPDTRCF 574
+R ILHS +Y G LS E +K+++E +L HP +E+K+G+G+ I IG +PDF +RC
Sbjct: 108 VRMILHSGQYDNGDRLSAEHEKTIIEKLLPFHPEFEKKIGSGVDYITIGYHPDFERSRCL 167
Query: 575 MVERKDGSCVDFSYWKCLSRL 637
+ R+DG VDFSYWKC+ L
Sbjct: 168 FIVREDGELVDFSYWKCIKGL 188
>gb|ABC47855.1| defective chloroplast and leaves protein [Glycine max]
Length = 204
Score = 80.9 bits (198), Expect = 8e-13
Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Frame = +2
Query: 401 LREILHS-RYMVGQSLS-ETDKSLVENVLRHHPHYEEKVGNGLQGIKIGKNPDFPDTRCF 574
+R ILHS +Y G LS E +K+++E +L HP +E+K+G+G+ I IG +PDF +RC
Sbjct: 100 VRMILHSGQYDNGDRLSAEHEKTIIEKLLPFHPEFEKKIGSGVDYITIGYHPDFERSRCL 159
Query: 575 MVERKDGSCVDFSYWKCLSRL 637
+ R+DG VDFSYWKC+ L
Sbjct: 160 FIVREDGELVDFSYWKCIKGL 180
>gb|EXB56512.1| hypothetical protein L484_008893 [Morus notabilis]
Length = 230
Score = 80.5 bits (197), Expect = 1e-12
Identities = 56/161 (34%), Positives = 85/161 (52%), Gaps = 2/161 (1%)
Frame = +2
Query: 152 TAYDRSMRDSRRVMEKKAKYNSYVQNDKVSIPPKESNRSSNHILGDGWQMQSKNKDTKSL 331
TA + S R E+KA +S ND + KES + D Q K+K+ + L
Sbjct: 65 TAANESTRPDE---EEKAAASSSTDNDGGELSVKESPKYPRW--NDPDCRQWKDKEEEIL 119
Query: 332 KSILHVSSKVKNSEGKQEVLPRTLREILHSR-YMVGQSLS-ETDKSLVENVLRHHPHYEE 505
+ I E + ++ILHSR YM G+ L+ E +K++VE +L +HP E+
Sbjct: 120 RDI--------------EPILLLTKDILHSRMYMDGERLTAEDEKAVVEKLLAYHPRSED 165
Query: 506 KVGNGLQGIKIGKNPDFPDTRCFMVERKDGSCVDFSYWKCL 628
K+G GL I + ++P F ++RC + R DG+ +DFSY KCL
Sbjct: 166 KIGCGLDSIMVDRHPQFRNSRCLFIIRTDGAWIDFSYQKCL 206
>ref|XP_002326941.1| predicted protein [Populus trichocarpa]
gi|566202105|ref|XP_006374928.1| hypothetical protein
POPTR_0014s02820g [Populus trichocarpa]
gi|550323240|gb|ERP52725.1| hypothetical protein
POPTR_0014s02820g [Populus trichocarpa]
Length = 209
Score = 80.5 bits (197), Expect = 1e-12
Identities = 45/121 (37%), Positives = 73/121 (60%), Gaps = 17/121 (14%)
Frame = +2
Query: 326 SLKSILHVSSKVKNSEGKQE---------VLPRTL------REILHS-RYMVGQSLS-ET 454
S K ++ +S +V++SE ++E +L T+ R ILHS +Y G LS +
Sbjct: 66 SEKDLVGISEEVEDSEEEKEEGFVDWEDRILEDTVPLVGFVRMILHSGKYESGDRLSPDH 125
Query: 455 DKSLVENVLRHHPHYEEKVGNGLQGIKIGKNPDFPDTRCFMVERKDGSCVDFSYWKCLSR 634
++++V+ +L +HP + K+G G+ I +G +PDF ++RC + RKDG VDFSYWKC+
Sbjct: 126 ERTIVDRLLAYHPDCDSKIGCGIDYITVGYHPDFVESRCLFIVRKDGQLVDFSYWKCIKG 185
Query: 635 L 637
L
Sbjct: 186 L 186
>ref|XP_006855235.1| hypothetical protein AMTR_s00051p00224060 [Amborella trichopoda]
gi|548858988|gb|ERN16702.1| hypothetical protein
AMTR_s00051p00224060 [Amborella trichopoda]
Length = 204
Score = 80.1 bits (196), Expect = 1e-12
Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
Frame = +2
Query: 356 KVKNSEGKQEVLPRT--LREILHS-RYMVGQSLS-ETDKSLVENVLRHHPHYEEKVGNGL 523
K K E +++ P T +EILHS RY+ G+ L+ E +K +VE +L +HPH ++K+G GL
Sbjct: 86 KAKEEEILRDIEPITDFTKEILHSNRYVDGECLTLEDEKVVVEKLLAYHPHSQDKIGCGL 145
Query: 524 QGIKIGKNPDFPDTRCFMVERKDGSCVDFSYWKCL 628
I + ++P F ++RC V R DG +DFSY KCL
Sbjct: 146 DAIMVDRHPQFRNSRCLFVVRTDGGWIDFSYQKCL 180