BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00012724
         (548 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22541.1| unknown [Picea sitchensis]                             167   1e-39
ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleo...   164   1e-38
gb|AFK45150.1| unknown [Lotus japonicus]                              164   1e-38
ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleo...   164   1e-38
ref|XP_003555743.1| PREDICTED: probable small nuclear ribonucleo...   164   1e-38
gb|ACU13643.1| unknown [Glycine max]                                  164   1e-38
ref|XP_004507856.1| PREDICTED: probable small nuclear ribonucleo...   162   5e-38
gb|ABA95170.1| small nuclear ribonucleoprotein F, putative, expr...   162   5e-38
ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group] g...   162   5e-38
ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group] g...   162   5e-38
gb|EEC72605.1| hypothetical protein OsI_06076 [Oryza sativa Indi...   162   5e-38
ref|XP_006848141.1| hypothetical protein AMTR_s00029p00226370 [A...   161   8e-38
ref|XP_004951718.1| PREDICTED: probable small nuclear ribonucleo...   161   8e-38
ref|XP_003563369.1| PREDICTED: probable small nuclear ribonucleo...   161   8e-38
ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago ...   161   8e-38
gb|EMJ25019.1| hypothetical protein PRUPE_ppa014017mg [Prunus pe...   161   1e-37
ref|XP_003570509.1| PREDICTED: probable small nuclear ribonucleo...   160   1e-37
ref|XP_001777342.1| predicted protein [Physcomitrella patens] gi...   160   2e-37
ref|NP_001151866.1| small nuclear ribonucleoprotein F [Zea mays]...   160   2e-37
ref|NP_001150516.1| small nuclear ribonucleoprotein F [Zea mays]...   160   2e-37

>gb|ABK22541.1| unknown [Picea sitchensis]
          Length = 84

 Score =  167 bits (424), Expect = 1e-39
 Identities = 80/82 (97%), Positives = 81/82 (98%)
 Frame = +1

Query: 238 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 417
           TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE
Sbjct: 3   TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 62

Query: 418 VLIRCNNVLYLRGVPEDEEAEE 483
           VLIRCNNVLYLRGVPEDE+ EE
Sbjct: 63  VLIRCNNVLYLRGVPEDEDIEE 84


>ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleoprotein F [Vitis
           vinifera] gi|296083390|emb|CBI23345.3| unnamed protein
           product [Vitis vinifera]
          Length = 88

 Score =  164 bits (416), Expect = 1e-38
 Identities = 77/82 (93%), Positives = 81/82 (98%)
 Frame = +1

Query: 238 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 417
           TVP+NPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA++EEYIDGQFTGNLGE
Sbjct: 3   TVPLNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANSEEYIDGQFTGNLGE 62

Query: 418 VLIRCNNVLYLRGVPEDEEAEE 483
           +LIRCNNVLYLRGVPEDEE EE
Sbjct: 63  ILIRCNNVLYLRGVPEDEEIEE 84


>gb|AFK45150.1| unknown [Lotus japonicus]
          Length = 88

 Score =  164 bits (415), Expect = 1e-38
 Identities = 76/82 (92%), Positives = 81/82 (98%)
 Frame = +1

Query: 238 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 417
           T+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYI+GQFTGNLGE
Sbjct: 3   TIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLGE 62

Query: 418 VLIRCNNVLYLRGVPEDEEAEE 483
           +LIRCNNVLYLRGVPEDEE E+
Sbjct: 63  ILIRCNNVLYLRGVPEDEEIED 84


>ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
           gi|561028116|gb|ESW26756.1| hypothetical protein
           PHAVU_003G145500g [Phaseolus vulgaris]
          Length = 88

 Score =  164 bits (415), Expect = 1e-38
 Identities = 76/82 (92%), Positives = 81/82 (98%)
 Frame = +1

Query: 238 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 417
           T+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYI+GQFTGNLGE
Sbjct: 3   TIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLGE 62

Query: 418 VLIRCNNVLYLRGVPEDEEAEE 483
           +LIRCNNVLYLRGVPEDEE E+
Sbjct: 63  ILIRCNNVLYLRGVPEDEEIED 84


>ref|XP_003555743.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
           gi|255628071|gb|ACU14380.1| unknown [Glycine max]
          Length = 88

 Score =  164 bits (415), Expect = 1e-38
 Identities = 76/82 (92%), Positives = 81/82 (98%)
 Frame = +1

Query: 238 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 417
           T+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYI+GQFTGNLGE
Sbjct: 3   TIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLGE 62

Query: 418 VLIRCNNVLYLRGVPEDEEAEE 483
           +LIRCNNVLYLRGVPEDEE E+
Sbjct: 63  ILIRCNNVLYLRGVPEDEEIED 84


>gb|ACU13643.1| unknown [Glycine max]
          Length = 88

 Score =  164 bits (415), Expect = 1e-38
 Identities = 76/82 (92%), Positives = 81/82 (98%)
 Frame = +1

Query: 238 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 417
           T+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYI+GQFTGNLGE
Sbjct: 3   TIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLGE 62

Query: 418 VLIRCNNVLYLRGVPEDEEAEE 483
           +LIRCNNVLYLRGVPEDEE E+
Sbjct: 63  ILIRCNNVLYLRGVPEDEEIED 84


>ref|XP_004507856.1| PREDICTED: probable small nuclear ribonucleoprotein F-like [Cicer
           arietinum]
          Length = 88

 Score =  162 bits (410), Expect = 5e-38
 Identities = 75/82 (91%), Positives = 80/82 (97%)
 Frame = +1

Query: 238 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 417
           T+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYI+G FTGNLGE
Sbjct: 3   TIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGSFTGNLGE 62

Query: 418 VLIRCNNVLYLRGVPEDEEAEE 483
           +LIRCNNVLYLRGVPEDEE E+
Sbjct: 63  ILIRCNNVLYLRGVPEDEEIED 84


>gb|ABA95170.1| small nuclear ribonucleoprotein F, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 85

 Score =  162 bits (410), Expect = 5e-38
 Identities = 76/82 (92%), Positives = 80/82 (97%)
 Frame = +1

Query: 238 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 417
           TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQF+GNLGE
Sbjct: 2   TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGE 61

Query: 418 VLIRCNNVLYLRGVPEDEEAEE 483
           +LIRCNNVLYLRGVPED E E+
Sbjct: 62  ILIRCNNVLYLRGVPEDAEIED 83


>ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group]
           gi|77552372|gb|ABA95169.1| small nuclear
           ribonucleoprotein F, putative, expressed [Oryza sativa
           Japonica Group] gi|113645618|dbj|BAF28759.1|
           Os11g0657300 [Oryza sativa Japonica Group]
           gi|215693012|dbj|BAG88432.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218186140|gb|EEC68567.1| hypothetical protein
           OsI_36896 [Oryza sativa Indica Group]
           gi|222616369|gb|EEE52501.1| hypothetical protein
           OsJ_34703 [Oryza sativa Japonica Group]
          Length = 86

 Score =  162 bits (410), Expect = 5e-38
 Identities = 76/82 (92%), Positives = 80/82 (97%)
 Frame = +1

Query: 238 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 417
           TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQF+GNLGE
Sbjct: 3   TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGE 62

Query: 418 VLIRCNNVLYLRGVPEDEEAEE 483
           +LIRCNNVLYLRGVPED E E+
Sbjct: 63  ILIRCNNVLYLRGVPEDAEIED 84


>ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group]
           gi|573918646|ref|XP_006646960.1| PREDICTED: probable
           small nuclear ribonucleoprotein F-like [Oryza
           brachyantha] gi|50252055|dbj|BAD27986.1| putative small
           nuclear ribonucleoprotein polypeptide F [Oryza sativa
           Japonica Group] gi|113535599|dbj|BAF07982.1|
           Os02g0177500 [Oryza sativa Japonica Group]
          Length = 86

 Score =  162 bits (410), Expect = 5e-38
 Identities = 76/82 (92%), Positives = 80/82 (97%)
 Frame = +1

Query: 238 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 417
           TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQF+GNLGE
Sbjct: 3   TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGE 62

Query: 418 VLIRCNNVLYLRGVPEDEEAEE 483
           +LIRCNNVLYLRGVPED E E+
Sbjct: 63  ILIRCNNVLYLRGVPEDTEIED 84


>gb|EEC72605.1| hypothetical protein OsI_06076 [Oryza sativa Indica Group]
           gi|222622299|gb|EEE56431.1| hypothetical protein
           OsJ_05599 [Oryza sativa Japonica Group]
          Length = 146

 Score =  162 bits (410), Expect = 5e-38
 Identities = 76/82 (92%), Positives = 80/82 (97%)
 Frame = +1

Query: 238 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 417
           TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQF+GNLGE
Sbjct: 63  TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGE 122

Query: 418 VLIRCNNVLYLRGVPEDEEAEE 483
           +LIRCNNVLYLRGVPED E E+
Sbjct: 123 ILIRCNNVLYLRGVPEDTEIED 144


>ref|XP_006848141.1| hypothetical protein AMTR_s00029p00226370 [Amborella trichopoda]
           gi|548851446|gb|ERN09722.1| hypothetical protein
           AMTR_s00029p00226370 [Amborella trichopoda]
          Length = 86

 Score =  161 bits (408), Expect = 8e-38
 Identities = 75/82 (91%), Positives = 80/82 (97%)
 Frame = +1

Query: 238 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 417
           TVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQ +GNLGE
Sbjct: 3   TVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQLSGNLGE 62

Query: 418 VLIRCNNVLYLRGVPEDEEAEE 483
           +LIRCNNVLYLRGVPEDEE E+
Sbjct: 63  ILIRCNNVLYLRGVPEDEEVED 84


>ref|XP_004951718.1| PREDICTED: probable small nuclear ribonucleoprotein F-like [Setaria
           italica] gi|514709230|ref|XP_004951733.1| PREDICTED:
           probable small nuclear ribonucleoprotein F-like [Setaria
           italica]
          Length = 86

 Score =  161 bits (408), Expect = 8e-38
 Identities = 75/82 (91%), Positives = 80/82 (97%)
 Frame = +1

Query: 238 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 417
           TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQF+GNLGE
Sbjct: 3   TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGE 62

Query: 418 VLIRCNNVLYLRGVPEDEEAEE 483
           +LIRCNNV+YLRGVPED E E+
Sbjct: 63  ILIRCNNVMYLRGVPEDAEIED 84


>ref|XP_003563369.1| PREDICTED: probable small nuclear ribonucleoprotein F-like
           [Brachypodium distachyon]
          Length = 86

 Score =  161 bits (408), Expect = 8e-38
 Identities = 75/82 (91%), Positives = 80/82 (97%)
 Frame = +1

Query: 238 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 417
           TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQF+GNLGE
Sbjct: 3   TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGE 62

Query: 418 VLIRCNNVLYLRGVPEDEEAEE 483
           +LIRCNNV+YLRGVPED E E+
Sbjct: 63  ILIRCNNVMYLRGVPEDTEIED 84


>ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago truncatula]
           gi|355511167|gb|AES92309.1| Small nuclear
           ribonucleoprotein F [Medicago truncatula]
           gi|388505566|gb|AFK40849.1| unknown [Medicago
           truncatula]
          Length = 88

 Score =  161 bits (408), Expect = 8e-38
 Identities = 74/82 (90%), Positives = 80/82 (97%)
 Frame = +1

Query: 238 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 417
           T+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYI+G FTGNLGE
Sbjct: 3   TIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGNFTGNLGE 62

Query: 418 VLIRCNNVLYLRGVPEDEEAEE 483
           +LIRCNNVLY+RGVPEDEE E+
Sbjct: 63  ILIRCNNVLYMRGVPEDEEIED 84


>gb|EMJ25019.1| hypothetical protein PRUPE_ppa014017mg [Prunus persica]
          Length = 91

 Score =  161 bits (407), Expect = 1e-37
 Identities = 75/82 (91%), Positives = 80/82 (97%)
 Frame = +1

Query: 238 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 417
           T+PVNPKPFLNNLTGK VIVKLKWGMEYKG+LVSVDSYMNLQLA+TEEYIDGQFTGNLGE
Sbjct: 3   TIPVNPKPFLNNLTGKTVIVKLKWGMEYKGFLVSVDSYMNLQLANTEEYIDGQFTGNLGE 62

Query: 418 VLIRCNNVLYLRGVPEDEEAEE 483
           +LIRCNNVLYLRGVPEDEE E+
Sbjct: 63  ILIRCNNVLYLRGVPEDEEIED 84


>ref|XP_003570509.1| PREDICTED: probable small nuclear ribonucleoprotein F-like
           [Brachypodium distachyon]
          Length = 86

 Score =  160 bits (406), Expect = 1e-37
 Identities = 74/82 (90%), Positives = 80/82 (97%)
 Frame = +1

Query: 238 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 417
           TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQF+GNLGE
Sbjct: 3   TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGE 62

Query: 418 VLIRCNNVLYLRGVPEDEEAEE 483
           +LIRCNNV+Y+RGVPED E E+
Sbjct: 63  ILIRCNNVMYMRGVPEDTEIED 84


>ref|XP_001777342.1| predicted protein [Physcomitrella patens]
           gi|162671318|gb|EDQ57872.1| predicted protein
           [Physcomitrella patens]
          Length = 85

 Score =  160 bits (405), Expect = 2e-37
 Identities = 75/82 (91%), Positives = 80/82 (97%)
 Frame = +1

Query: 238 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 417
           TVPVNPKPFLN+LTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEE++DG FTGNLGE
Sbjct: 1   TVPVNPKPFLNDLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEFVDGAFTGNLGE 60

Query: 418 VLIRCNNVLYLRGVPEDEEAEE 483
           VLIRCNNV+YLRGVPEDE+A E
Sbjct: 61  VLIRCNNVMYLRGVPEDEDAAE 82


>ref|NP_001151866.1| small nuclear ribonucleoprotein F [Zea mays]
           gi|195650409|gb|ACG44672.1| small nuclear
           ribonucleoprotein F [Zea mays]
           gi|413935831|gb|AFW70382.1| small nuclear
           ribonucleoprotein F [Zea mays]
          Length = 107

 Score =  160 bits (404), Expect = 2e-37
 Identities = 74/82 (90%), Positives = 79/82 (96%)
 Frame = +1

Query: 238 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 417
           TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYL SVDSYMNLQLA+TEEYIDGQF+GNLGE
Sbjct: 24  TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNLGE 83

Query: 418 VLIRCNNVLYLRGVPEDEEAEE 483
           +LIRCNNV+YLRGVPED E E+
Sbjct: 84  ILIRCNNVMYLRGVPEDAEIED 105


>ref|NP_001150516.1| small nuclear ribonucleoprotein F [Zea mays]
           gi|194696080|gb|ACF82124.1| unknown [Zea mays]
           gi|195609436|gb|ACG26548.1| small nuclear
           ribonucleoprotein F [Zea mays]
           gi|195622854|gb|ACG33257.1| small nuclear
           ribonucleoprotein F [Zea mays]
           gi|195639814|gb|ACG39375.1| small nuclear
           ribonucleoprotein F [Zea mays]
           gi|413926377|gb|AFW66309.1| small nuclear
           ribonucleoprotein F [Zea mays]
           gi|413935832|gb|AFW70383.1| small nuclear
           ribonucleoprotein F [Zea mays]
           gi|413935833|gb|AFW70384.1| small nuclear
           ribonucleoprotein F [Zea mays]
          Length = 86

 Score =  160 bits (404), Expect = 2e-37
 Identities = 74/82 (90%), Positives = 79/82 (96%)
 Frame = +1

Query: 238 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 417
           TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYL SVDSYMNLQLA+TEEYIDGQF+GNLGE
Sbjct: 3   TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNLGE 62

Query: 418 VLIRCNNVLYLRGVPEDEEAEE 483
           +LIRCNNV+YLRGVPED E E+
Sbjct: 63  ILIRCNNVMYLRGVPEDAEIED 84