BLASTX nr result

ID: Ephedra27_contig00012672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00012672
         (359 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [A...    58   1e-06
gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus pe...    56   6e-06
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06

>ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [Amborella trichopoda]
           gi|548855973|gb|ERN13836.1| hypothetical protein
           AMTR_s00049p00223850 [Amborella trichopoda]
          Length = 570

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
 Frame = -3

Query: 228 ICKLLKGKEWCKEIEEELNGIS-EITDDDVIITLRTLS-NPEKALSLFSWYAKHPSYKPS 55
           + KL+  K WC+EIE +LN ++ ++TD+ V+  L+ L  +P  +L  F W     + KPS
Sbjct: 10  VTKLVSQKGWCEEIENQLNKLNLKLTDEGVLFVLKELEKSPRNSLGFFKWVCDKMALKPS 69

Query: 54  SAVYNALLKAVGHTKSIE 1
           S  YN +L+ +G   S++
Sbjct: 70  SVAYNLMLRILGVKDSMK 87


>gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus persica]
          Length = 646

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
 Frame = -3

Query: 234 NQICKLLKGKEWCKEIEEELN-GISEITDDDVIITLRTLS-NPEKALSLFSWYAKHPSYK 61
           N + +L+   +W  E+E EL+     +T D VI  L+ L  +P+KA   F+W  +   +K
Sbjct: 83  NSVLQLVLANQWSAELENELSESYPSLTHDAVIYVLKKLDKDPKKAWDFFNWVCEKNGFK 142

Query: 60  PSSAVYNALLKAVGHTKSIE 1
           PSS V+N +L  +GH  S++
Sbjct: 143 PSSLVFNLMLGVLGHKDSMK 162


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/117 (26%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
 Frame = -3

Query: 345 QITQANHLLQGFQPRNYSSGSXXXXXXXXKLEEVAETNQICKLLKGKEWCKEIEEELNGI 166
           Q+TQ++     F  ++Y+S               ++ N I +L+   +W  E+E EL   
Sbjct: 31  QVTQSSRFSPSFSNQSYTSAFPYILYGKLFFS--SKPNSIVELVLENDWSDELESELEKS 88

Query: 165 SEI-TDDDVIITLRTLS-NPEKALSLFSWYAKHPSYKPSSAVYNALLKAVGHTKSIE 1
           S + T + VI  L+ L  +P++  + F+W  +   ++PSSA+Y+ +L+++ H +S++
Sbjct: 89  SSVLTHETVIYVLKKLDKDPQRTWNFFNWVTEKNGFRPSSAMYSLILRSLVHGESMK 145


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