BLASTX nr result

ID: Ephedra27_contig00012646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00012646
         (529 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004486632.1| PREDICTED: mediator of RNA polymerase II tra...    60   3e-07
ref|XP_004173720.1| PREDICTED: uncharacterized LOC101220890, par...    58   1e-06
ref|XP_004137040.1| PREDICTED: uncharacterized protein LOC101220...    58   1e-06
gb|EXB67225.1| hypothetical protein L484_025703 [Morus notabilis]      57   3e-06
ref|XP_004296139.1| PREDICTED: uncharacterized protein LOC101297...    57   3e-06
ref|XP_003533074.1| PREDICTED: mediator of RNA polymerase II tra...    57   3e-06
ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264...    56   4e-06
emb|CBI29079.3| unnamed protein product [Vitis vinifera]               56   4e-06

>ref|XP_004486632.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like [Cicer arietinum]
          Length = 1313

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
 Frame = +3

Query: 6   EQKHVTPFQQMNLQPSVSSMQPNTVAPLQNSTIALIQQSSGQASQQTVQTPMQSQAALNT 185
           E +  T  Q  N+Q  V++MQ N +  +Q++++     S    +QQ +   MQS A L++
Sbjct: 682 ENQMNTQLQTTNMQGPVATMQQNNMTSMQHNSL-----SGLSTTQQNMMNTMQSSANLDS 736

Query: 186 QGANVNSLQQSSANQIPHNPL---QHNNISSL-QQRGINSMQSSVQQGSN 323
              N+NSLQQ   + +  NP+   Q  N SSL  Q G+N +Q ++Q GS+
Sbjct: 737 AQGNMNSLQQVPVSSLQQNPVTAPQQTNASSLSSQAGVNVIQPNLQPGSS 786


>ref|XP_004173720.1| PREDICTED: uncharacterized LOC101220890, partial [Cucumis sativus]
          Length = 611

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 16/126 (12%)
 Frame = +3

Query: 3   QEQKHVTPFQQ-----------MNLQPSVSSMQPNTVAPLQNSTIALIQQSSGQASQQTV 149
           Q Q  +TP Q             N+Q SV+ +Q N ++ +Q++++   Q  SG A+QQ +
Sbjct: 108 QSQSQMTPLQSPENQINPQLHSANMQGSVAPVQQNNMSSMQHNSL---QTFSGSAAQQNM 164

Query: 150 QTPMQSQAALNT-QGANVNSLQQSSANQIPHNPL----QHNNISSLQQRGINSMQSSVQQ 314
             PMQ  ++L + QG +++SLQQ +A  +  NP     + NN S   Q  +N++Q ++  
Sbjct: 165 TIPMQPGSSLESGQGNSLSSLQQVAAGSLQQNPANSSQRSNNGSLPSQNVVNTLQPNMNS 224

Query: 315 GSNNPH 332
             +NP+
Sbjct: 225 LQSNPN 230


>ref|XP_004137040.1| PREDICTED: uncharacterized protein LOC101220890 [Cucumis sativus]
          Length = 1345

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 16/126 (12%)
 Frame = +3

Query: 3    QEQKHVTPFQQ-----------MNLQPSVSSMQPNTVAPLQNSTIALIQQSSGQASQQTV 149
            Q Q  +TP Q             N+Q SV+ +Q N ++ +Q++++   Q  SG A+QQ +
Sbjct: 677  QSQSQMTPLQSPENQINPQLHSANMQGSVAPVQQNNMSSMQHNSL---QTFSGSAAQQNM 733

Query: 150  QTPMQSQAALNT-QGANVNSLQQSSANQIPHNPL----QHNNISSLQQRGINSMQSSVQQ 314
              PMQ  ++L + QG +++SLQQ +A  +  NP     + NN S   Q  +N++Q ++  
Sbjct: 734  TIPMQPGSSLESGQGNSLSSLQQVAAGSLQQNPANSSQRSNNGSLPSQNVVNTLQPNMNS 793

Query: 315  GSNNPH 332
              +NP+
Sbjct: 794  LQSNPN 799


>gb|EXB67225.1| hypothetical protein L484_025703 [Morus notabilis]
          Length = 1396

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 9/113 (7%)
 Frame = +3

Query: 30   QQMNLQPSVSSMQPNTVAPLQNSTIALIQQSSGQASQQTVQTPMQSQAALNT-QGANVNS 206
            Q MN Q SV++MQ N +  LQ S+I+ +  S     QQ V   +Q  + +++ QG ++NS
Sbjct: 746  QSMNAQGSVATMQQNNMTSLQQSSISTL--SGVSTPQQNVMNSLQPNSNMDSGQGNSLNS 803

Query: 207  LQQSSANQIPHNPLQ---HNNISSL-QQRGINSMQSSVQQGSNN----PHGHI 341
            LQQ S   +  NP+      NI++L  Q G+N +QSS+     N     H HI
Sbjct: 804  LQQVSVGSMQQNPVSAPPQGNINALSSQNGMNVLQSSINTLQPNSGMLQHQHI 856


>ref|XP_004296139.1| PREDICTED: uncharacterized protein LOC101297525 [Fragaria vesca
            subsp. vesca]
          Length = 2234

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
 Frame = +3

Query: 30   QQMNLQPSVSSMQPNTVAPLQNSTIALIQQSSGQASQQTVQTPMQSQAALNT-QGANVNS 206
            Q MNLQ SV +MQ N +  LQ ++++ +  S    +QQ +  P+Q  + ++  QG ++NS
Sbjct: 1603 QSMNLQGSVPTMQQNNMTGLQQNSMSSL--SGVSTAQQNMMNPLQPSSNMDPGQGTSLNS 1660

Query: 207  LQQSSANQIPHNPL---QHNNISSLQ-QRGINSMQSSVQQGSNNP 329
            LQQ     I   P+   Q  N+++L  Q G+N +Q+++    +NP
Sbjct: 1661 LQQVPVGSIQQTPVSAPQQANMNALSSQNGVNMLQNNINPLQSNP 1705


>ref|XP_003533074.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like isoform X1 [Glycine max]
           gi|571472483|ref|XP_006585624.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 15a-like isoform
           X2 [Glycine max]
          Length = 1304

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 41/107 (38%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
 Frame = +3

Query: 6   EQKHVTPFQQMNLQPSVSSMQPNTVAPLQNSTIALIQQSSGQASQQTVQTPMQSQAALNT 185
           E +  +  Q  NLQ SV +MQ N +A +Q++++     S     QQ +   MQ    L++
Sbjct: 670 ENQMNSQLQSTNLQGSVPTMQQNNIASMQHNSL-----SGVSTGQQNMMNSMQPGTNLDS 724

Query: 186 -QGANVNSLQQSSANQIPHNPLQHNNISSLQQRGINSMQSSVQQGSN 323
             G +VNSLQQ     IP N LQ N +S+ QQ  INS+ S  Q G+N
Sbjct: 725 VHGNSVNSLQQ-----IPMNSLQQNPVSTAQQTNINSLPS--QGGAN 764


>ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264243 [Vitis vinifera]
          Length = 1671

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 5/100 (5%)
 Frame = +3

Query: 30   QQMNLQPSVSSMQPNTVAPLQNSTIALIQQSSGQASQQTVQTPMQSQAALNT-QGANVNS 206
            Q MNLQ SV++MQ N V  LQ S++  +  S    +QQ +   +QS A L++ QG  + S
Sbjct: 1023 QPMNLQGSVATMQQNNVPSLQPSSMPSL--SGLPNAQQNIMNSLQSSANLDSGQGNALTS 1080

Query: 207  LQQSSANQIPHNPL---QHNNISSL-QQRGINSMQSSVQQ 314
            LQQ++   +  NP+   Q  NI++L  Q G+N +Q ++ Q
Sbjct: 1081 LQQAAVGALQQNPVSAPQQANINNLSSQNGVNVLQQNINQ 1120


>emb|CBI29079.3| unnamed protein product [Vitis vinifera]
          Length = 350

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 5/100 (5%)
 Frame = +3

Query: 30  QQMNLQPSVSSMQPNTVAPLQNSTIALIQQSSGQASQQTVQTPMQSQAALNT-QGANVNS 206
           Q MNLQ SV++MQ N V  LQ S++  +  S    +QQ +   +QS A L++ QG  + S
Sbjct: 184 QPMNLQGSVATMQQNNVPSLQPSSMPSL--SGLPNAQQNIMNSLQSSANLDSGQGNALTS 241

Query: 207 LQQSSANQIPHNPL---QHNNISSL-QQRGINSMQSSVQQ 314
           LQQ++   +  NP+   Q  NI++L  Q G+N +Q ++ Q
Sbjct: 242 LQQAAVGALQQNPVSAPQQANINNLSSQNGVNVLQQNINQ 281


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