BLASTX nr result

ID: Ephedra27_contig00012559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00012559
         (697 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17740.1| unknown [Picea sitchensis]                              65   2e-08

>gb|ABR17740.1| unknown [Picea sitchensis]
          Length = 497

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
 Frame = -1

Query: 697 PPLPSSYFGNFLTYCGLKVSAKRLLSENLSFAVKLXXXXXXXXXXXEQLRLLV-----QL 533
           PPLP ++ GN +     + +AK+LL +++ FA  L            Q+  L+     +L
Sbjct: 351 PPLPPTFLGNCICMGFAQTTAKQLLGQDIRFAATLIKELIKSCSSEGQVDNLIDWVDCRL 410

Query: 532 GSRN-VHSCFMKELKGVYGTFAPGYNKFPMYECDFGWGKPVRVDVADIHPPGDTTSGLVI 356
           GS + + S  ++ + G Y   A    KFP+YE D+GWGKP+   +  ++  G        
Sbjct: 411 GSGSPLPSLALEIIGGRYFVVAGNSPKFPVYELDYGWGKPLNAQIPTLNGVG-------- 462

Query: 355 ASPPPPNQYHAMQISTCLPPSQMQCFRDMLL 263
           A    P +   + I T LPP QM+  + +L+
Sbjct: 463 AMMLFPGRDDGIDIHTRLPPRQMETLKQILM 493


Top