BLASTX nr result

ID: Ephedra27_contig00012535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00012535
         (445 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006838898.1| hypothetical protein AMTR_s00002p00268880 [A...    44   3e-07
ref|XP_002973004.1| hypothetical protein SELMODRAFT_10235 [Selag...    42   4e-07
ref|XP_002984473.1| hypothetical protein SELMODRAFT_10232 [Selag...    42   4e-07

>ref|XP_006838898.1| hypothetical protein AMTR_s00002p00268880 [Amborella trichopoda]
           gi|548841404|gb|ERN01467.1| hypothetical protein
           AMTR_s00002p00268880 [Amborella trichopoda]
          Length = 1004

 Score = 43.5 bits (101), Expect(2) = 3e-07
 Identities = 24/60 (40%), Positives = 38/60 (63%)
 Frame = +2

Query: 125 IVMMQVLEKNMEARDMLFEKERFHMLFKYFLDIQSVLMELTMHGISDNSEPVKHAL*ALS 304
           +++ QV++    A+D+L EKE F +L KY  DI+ VL +L +H + D S+  + AL  LS
Sbjct: 15  LLLDQVIKTAKAAKDVLIEKESFKILSKYLHDIEPVLKQLQLHELKD-SQSARRALEFLS 73



 Score = 36.6 bits (83), Expect(2) = 3e-07
 Identities = 15/40 (37%), Positives = 26/40 (65%)
 Frame = +1

Query: 307 DIKSMQSRVHRCTFKSKLYLLMHY*AMLKDIHHITRDIGK 426
           D+ + QS + +CT +S+ YLL+    ++K+    TRDIG+
Sbjct: 75  DVSTAQSLIDKCTNRSRFYLLLKCRQIVKEAQQATRDIGR 114


>ref|XP_002973004.1| hypothetical protein SELMODRAFT_10235 [Selaginella moellendorffii]
           gi|300159605|gb|EFJ26225.1| hypothetical protein
           SELMODRAFT_10235 [Selaginella moellendorffii]
          Length = 986

 Score = 41.6 bits (96), Expect(2) = 4e-07
 Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
 Frame = +1

Query: 298 ALSDIKSMQSRVHR----CTFKSKLYLLMHY*AMLKDIHHITRDIGK 426
           AL  +K+   R H     CT KSK YLL+H  +++KD   +TRDIGK
Sbjct: 59  ALQSLKTDLDRAHTLISDCTDKSKFYLLLHCRSIVKDAQVVTRDIGK 105



 Score = 37.7 bits (86), Expect(2) = 4e-07
 Identities = 19/40 (47%), Positives = 26/40 (65%)
 Frame = +2

Query: 125 IVMMQVLEKNMEARDMLFEKERFHMLFKYFLDIQSVLMEL 244
           ++  QVLE  + A+D+L EKE F  L +Y  DI+ VL EL
Sbjct: 6   LITTQVLEIAIAAKDVLVEKESFQKLSRYLHDIEPVLAEL 45


>ref|XP_002984473.1| hypothetical protein SELMODRAFT_10232 [Selaginella moellendorffii]
           gi|300147861|gb|EFJ14523.1| hypothetical protein
           SELMODRAFT_10232 [Selaginella moellendorffii]
          Length = 986

 Score = 41.6 bits (96), Expect(2) = 4e-07
 Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
 Frame = +1

Query: 298 ALSDIKSMQSRVHR----CTFKSKLYLLMHY*AMLKDIHHITRDIGK 426
           AL  +K+   R H     CT KSK YLL+H  +++KD   +TRDIGK
Sbjct: 59  ALQSLKTDLDRAHTLVSDCTDKSKFYLLLHCRSIVKDAQVVTRDIGK 105



 Score = 37.7 bits (86), Expect(2) = 4e-07
 Identities = 19/40 (47%), Positives = 26/40 (65%)
 Frame = +2

Query: 125 IVMMQVLEKNMEARDMLFEKERFHMLFKYFLDIQSVLMEL 244
           ++  QVLE  + A+D+L EKE F  L +Y  DI+ VL EL
Sbjct: 6   LITTQVLEIAIAAKDVLVEKESFQKLSRYLHDIEPVLAEL 45


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