BLASTX nr result
ID: Ephedra27_contig00012527
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00012527
(383 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002867112.1| predicted protein [Arabidopsis lyrata subsp.... 60 2e-07
ref|XP_006487231.1| PREDICTED: bifunctional dihydrofolate reduct... 60 3e-07
ref|XP_006423346.1| hypothetical protein CICLE_v10028191mg [Citr... 60 3e-07
gb|AAA32788.1| dihydrofolate reductase-thymidylate synthase [Ara... 60 3e-07
ref|NP_179230.1| bifunctional dihydrofolate reductase-thymidylat... 60 3e-07
ref|XP_006283329.1| hypothetical protein CARUB_v10004370mg [Caps... 59 5e-07
ref|XP_006384511.1| hypothetical protein POPTR_0004s16470g [Popu... 59 7e-07
ref|XP_006412210.1| hypothetical protein EUTSA_v10024973mg [Eutr... 59 9e-07
ref|NP_195183.2| bifunctional dihydrofolate reductase - thymidyl... 59 9e-07
ref|XP_006847539.1| hypothetical protein AMTR_s00014p00122790 [A... 58 1e-06
ref|XP_002886222.1| dihydrofolate reductase-thymidylate synthase... 58 1e-06
gb|EPS68164.1| bifunctional dihydrofolate reductase-thymidylate ... 58 2e-06
gb|EOX97965.1| Thymidylate synthase 1 isoform 10 [Theobroma cacao] 57 2e-06
gb|EOX97964.1| Thymidylate synthase 1 isoform 9 [Theobroma cacao] 57 2e-06
gb|EOX97963.1| Thymidylate synthase 1 isoform 8 [Theobroma cacao] 57 2e-06
gb|EOX97962.1| Thymidylate synthase 1 isoform 7 [Theobroma cacao] 57 2e-06
gb|EOX97961.1| Thymidylate synthase 1 isoform 6 [Theobroma cacao] 57 2e-06
gb|EOX97960.1| Thymidylate synthase 1 isoform 5, partial [Theobr... 57 2e-06
gb|EOX97959.1| Thymidylate synthase 1 isoform 4 [Theobroma cacao] 57 2e-06
gb|EOX97956.1| Thymidylate synthase 1 isoform 1 [Theobroma cacao... 57 2e-06
>ref|XP_002867112.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312948|gb|EFH43371.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 565
Score = 60.5 bits (145), Expect = 2e-07
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 4/79 (5%)
Frame = -2
Query: 226 IALQASVLRLLQVSFKK-SPCIYTMATAVNTSVSNILESAPDSI---SEPKRNFQIVVAA 59
+A ++++L L Q F K SP ++A SVS + + ++ S+P+ +Q+VVAA
Sbjct: 13 LAFKSALLPLSQRWFCKFSPKPSSLANIFKVSVSTMANTLNGNVIMPSKPQSTYQVVVAA 72
Query: 58 TSELGIGKDGKLPWKLPSD 2
T E+GIGKDGKLPW LP+D
Sbjct: 73 TKEMGIGKDGKLPWNLPTD 91
>ref|XP_006487231.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
synthase-like isoform X1 [Citrus sinensis]
gi|568867829|ref|XP_006487232.1| PREDICTED: bifunctional
dihydrofolate reductase-thymidylate synthase-like
isoform X2 [Citrus sinensis]
gi|568867831|ref|XP_006487233.1| PREDICTED: bifunctional
dihydrofolate reductase-thymidylate synthase-like
isoform X3 [Citrus sinensis]
gi|568867833|ref|XP_006487234.1| PREDICTED: bifunctional
dihydrofolate reductase-thymidylate synthase-like
isoform X4 [Citrus sinensis]
gi|568867835|ref|XP_006487235.1| PREDICTED: bifunctional
dihydrofolate reductase-thymidylate synthase-like
isoform X5 [Citrus sinensis]
gi|568867837|ref|XP_006487236.1| PREDICTED: bifunctional
dihydrofolate reductase-thymidylate synthase-like
isoform X6 [Citrus sinensis]
gi|568867839|ref|XP_006487237.1| PREDICTED: bifunctional
dihydrofolate reductase-thymidylate synthase-like
isoform X7 [Citrus sinensis]
Length = 527
Score = 60.1 bits (144), Expect = 3e-07
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = -2
Query: 157 MATAVNTSVSNILESAPDSISEPKRNFQIVVAATSELGIGKDGKLPWKLPSD 2
MA TS+SN S + PKR++Q+VVAAT ++GIGKDGKLPWKLPSD
Sbjct: 1 MAADSKTSLSNGNVSTQPN---PKRSYQVVVAATRDMGIGKDGKLPWKLPSD 49
>ref|XP_006423346.1| hypothetical protein CICLE_v10028191mg [Citrus clementina]
gi|567861386|ref|XP_006423347.1| hypothetical protein
CICLE_v10028191mg [Citrus clementina]
gi|557525280|gb|ESR36586.1| hypothetical protein
CICLE_v10028191mg [Citrus clementina]
gi|557525281|gb|ESR36587.1| hypothetical protein
CICLE_v10028191mg [Citrus clementina]
Length = 527
Score = 60.1 bits (144), Expect = 3e-07
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = -2
Query: 157 MATAVNTSVSNILESAPDSISEPKRNFQIVVAATSELGIGKDGKLPWKLPSD 2
MA TS+SN S + PKR++Q+VVAAT ++GIGKDGKLPWKLPSD
Sbjct: 1 MAADSKTSLSNGNVSTQPN---PKRSYQVVVAATRDMGIGKDGKLPWKLPSD 49
>gb|AAA32788.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana]
Length = 519
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/50 (58%), Positives = 36/50 (72%)
Frame = -2
Query: 151 TAVNTSVSNILESAPDSISEPKRNFQIVVAATSELGIGKDGKLPWKLPSD 2
T +N SV+ L S EP+R +Q+VVAAT E+GIGKDGKLPW LP+D
Sbjct: 4 TTLNDSVTTTLAS------EPQRTYQVVVAATKEMGIGKDGKLPWNLPTD 47
>ref|NP_179230.1| bifunctional dihydrofolate reductase-thymidylate synthase 1
[Arabidopsis thaliana]
gi|21264432|sp|Q05762.2|DRTS1_ARATH RecName:
Full=Bifunctional dihydrofolate reductase-thymidylate
synthase 1; Short=DHFR-TS 1; Includes: RecName:
Full=Dihydrofolate reductase; Includes: RecName:
Full=Thymidylate synthase gi|4544392|gb|AAD22302.1|
dihydrofolate reductase-thymidylate synthase
[Arabidopsis thaliana] gi|17381024|gb|AAL36324.1|
putative dihydrofolate reductase-thymidylate synthase
[Arabidopsis thaliana] gi|21281275|gb|AAM45080.1|
putative dihydrofolate reductase-thymidylate synthase
[Arabidopsis thaliana] gi|330251395|gb|AEC06489.1|
Bifunctional dihydrofolate reductase-thymidylate
synthase 1 [Arabidopsis thaliana]
Length = 519
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/50 (58%), Positives = 36/50 (72%)
Frame = -2
Query: 151 TAVNTSVSNILESAPDSISEPKRNFQIVVAATSELGIGKDGKLPWKLPSD 2
T +N SV+ L S EP+R +Q+VVAAT E+GIGKDGKLPW LP+D
Sbjct: 4 TTLNDSVTTTLAS------EPQRTYQVVVAATKEMGIGKDGKLPWNLPTD 47
>ref|XP_006283329.1| hypothetical protein CARUB_v10004370mg [Capsella rubella]
gi|482552034|gb|EOA16227.1| hypothetical protein
CARUB_v10004370mg [Capsella rubella]
Length = 628
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Frame = -2
Query: 181 KKSPCIYTMATAVNTSVSNILESAPDSI---SEPKRNFQIVVAATSELGIGKDGKLPWKL 11
K SP ++A S+S + S ++ SE +R +Q+VVAAT E+GIGKDGKLPW L
Sbjct: 93 KVSPKPSSLANIFKISISTMATSLNGNVIMTSELQRTYQVVVAATKEMGIGKDGKLPWNL 152
Query: 10 PSD 2
PSD
Sbjct: 153 PSD 155
>ref|XP_006384511.1| hypothetical protein POPTR_0004s16470g [Populus trichocarpa]
gi|566166865|ref|XP_002306118.2| hypothetical protein
POPTR_0004s16470g [Populus trichocarpa]
gi|566166867|ref|XP_006384512.1| dihydrofolate
reductase-thymidylate synthase family protein [Populus
trichocarpa] gi|550341164|gb|ERP62308.1| hypothetical
protein POPTR_0004s16470g [Populus trichocarpa]
gi|550341165|gb|EEE86629.2| hypothetical protein
POPTR_0004s16470g [Populus trichocarpa]
gi|550341166|gb|ERP62309.1| dihydrofolate
reductase-thymidylate synthase family protein [Populus
trichocarpa]
Length = 528
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/46 (58%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = -2
Query: 136 SVSNILE-SAPDSISEPKRNFQIVVAATSELGIGKDGKLPWKLPSD 2
SV+N+ +A S+P++ +Q+VVAAT ++GIGKDGKLPWKLPSD
Sbjct: 5 SVANLSNGNANTQQSDPRKTYQVVVAATKDMGIGKDGKLPWKLPSD 50
>ref|XP_006412210.1| hypothetical protein EUTSA_v10024973mg [Eutrema salsugineum]
gi|557113380|gb|ESQ53663.1| hypothetical protein
EUTSA_v10024973mg [Eutrema salsugineum]
Length = 503
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = -2
Query: 133 VSNILESAPDSISEPKRNFQIVVAATSELGIGKDGKLPWKLPSD 2
+S+ L SEP+R +Q+VVAAT E+GIGKDGKLPW LP+D
Sbjct: 1 MSSSLSGHVTMASEPQRTYQVVVAATKEMGIGKDGKLPWSLPAD 44
>ref|NP_195183.2| bifunctional dihydrofolate reductase - thymidylate synthase
[Arabidopsis thaliana]
gi|150421542|sp|Q05763.2|DRTS2_ARATH RecName:
Full=Bifunctional dihydrofolate reductase-thymidylate
synthase 2; Short=DHFR-TS 2; Includes: RecName:
Full=Dihydrofolate reductase; Includes: RecName:
Full=Thymidylate synthase gi|110743754|dbj|BAE99713.1|
dihydrofolate reductase-thymidylate synthase
[Arabidopsis thaliana] gi|332660994|gb|AEE86394.1|
bifunctional dihydrofolate reductase - thymidylate
synthase [Arabidopsis thaliana]
Length = 565
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Frame = -2
Query: 226 IALQASVLRLLQVSFKK-SPCIYTMATAVNTSVSNILESAPDSI---SEPKRNFQIVVAA 59
+A ++++L L Q F K SP ++ S+S + + ++ S+P+ +Q+VVAA
Sbjct: 13 LAFKSALLPLSQRWFCKFSPKPSSLTNIFKVSISTMANTLNGNVIMTSKPQSTYQVVVAA 72
Query: 58 TSELGIGKDGKLPWKLPSD 2
T E+GIGKDGKLPW LP+D
Sbjct: 73 TKEMGIGKDGKLPWNLPTD 91
>ref|XP_006847539.1| hypothetical protein AMTR_s00014p00122790 [Amborella trichopoda]
gi|548850773|gb|ERN09120.1| hypothetical protein
AMTR_s00014p00122790 [Amborella trichopoda]
Length = 567
Score = 58.2 bits (139), Expect = 1e-06
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = -2
Query: 103 SISEPKRNFQIVVAATSELGIGKDGKLPWKLPSD 2
S+ +P R +Q+VVAAT+++GIGKDGKLPWKLPSD
Sbjct: 56 SMPDPLRTYQVVVAATADMGIGKDGKLPWKLPSD 89
>ref|XP_002886222.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis lyrata
subsp. lyrata] gi|297332062|gb|EFH62481.1| dihydrofolate
reductase-thymidylate synthase [Arabidopsis lyrata
subsp. lyrata]
Length = 515
Score = 58.2 bits (139), Expect = 1e-06
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = -2
Query: 97 SEPKRNFQIVVAATSELGIGKDGKLPWKLPSD 2
SEP+R +Q+VVAAT E+GIGKDGKLPW LP+D
Sbjct: 16 SEPQRTYQVVVAATKEMGIGKDGKLPWNLPTD 47
>gb|EPS68164.1| bifunctional dihydrofolate reductase-thymidylate synthase, partial
[Genlisea aurea]
Length = 527
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = -2
Query: 145 VNTSVSNILESAPDSISEPKRNFQIVVAATSELGIGKDGKLPWKLPSD 2
V +S+ + DS S KR +Q+VVAAT ++GIGKDGKLPWKLP D
Sbjct: 2 VKSSLDSHSNGQNDSESVSKRTYQVVVAATPDMGIGKDGKLPWKLPGD 49
>gb|EOX97965.1| Thymidylate synthase 1 isoform 10 [Theobroma cacao]
Length = 430
Score = 57.4 bits (137), Expect = 2e-06
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = -2
Query: 94 EPKRNFQIVVAATSELGIGKDGKLPWKLPSD 2
+P+R +Q+VVAAT ++GIGKDGKLPWKLPSD
Sbjct: 21 DPQRTYQVVVAATKDMGIGKDGKLPWKLPSD 51
>gb|EOX97964.1| Thymidylate synthase 1 isoform 9 [Theobroma cacao]
Length = 467
Score = 57.4 bits (137), Expect = 2e-06
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = -2
Query: 94 EPKRNFQIVVAATSELGIGKDGKLPWKLPSD 2
+P+R +Q+VVAAT ++GIGKDGKLPWKLPSD
Sbjct: 21 DPQRTYQVVVAATKDMGIGKDGKLPWKLPSD 51
>gb|EOX97963.1| Thymidylate synthase 1 isoform 8 [Theobroma cacao]
Length = 467
Score = 57.4 bits (137), Expect = 2e-06
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = -2
Query: 94 EPKRNFQIVVAATSELGIGKDGKLPWKLPSD 2
+P+R +Q+VVAAT ++GIGKDGKLPWKLPSD
Sbjct: 21 DPQRTYQVVVAATKDMGIGKDGKLPWKLPSD 51
>gb|EOX97962.1| Thymidylate synthase 1 isoform 7 [Theobroma cacao]
Length = 467
Score = 57.4 bits (137), Expect = 2e-06
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = -2
Query: 94 EPKRNFQIVVAATSELGIGKDGKLPWKLPSD 2
+P+R +Q+VVAAT ++GIGKDGKLPWKLPSD
Sbjct: 21 DPQRTYQVVVAATKDMGIGKDGKLPWKLPSD 51
>gb|EOX97961.1| Thymidylate synthase 1 isoform 6 [Theobroma cacao]
Length = 461
Score = 57.4 bits (137), Expect = 2e-06
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = -2
Query: 94 EPKRNFQIVVAATSELGIGKDGKLPWKLPSD 2
+P+R +Q+VVAAT ++GIGKDGKLPWKLPSD
Sbjct: 21 DPQRTYQVVVAATKDMGIGKDGKLPWKLPSD 51
>gb|EOX97960.1| Thymidylate synthase 1 isoform 5, partial [Theobroma cacao]
Length = 503
Score = 57.4 bits (137), Expect = 2e-06
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = -2
Query: 94 EPKRNFQIVVAATSELGIGKDGKLPWKLPSD 2
+P+R +Q+VVAAT ++GIGKDGKLPWKLPSD
Sbjct: 21 DPQRTYQVVVAATKDMGIGKDGKLPWKLPSD 51
>gb|EOX97959.1| Thymidylate synthase 1 isoform 4 [Theobroma cacao]
Length = 511
Score = 57.4 bits (137), Expect = 2e-06
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = -2
Query: 94 EPKRNFQIVVAATSELGIGKDGKLPWKLPSD 2
+P+R +Q+VVAAT ++GIGKDGKLPWKLPSD
Sbjct: 21 DPQRTYQVVVAATKDMGIGKDGKLPWKLPSD 51
>gb|EOX97956.1| Thymidylate synthase 1 isoform 1 [Theobroma cacao]
gi|508706062|gb|EOX97958.1| Thymidylate synthase 1
isoform 1 [Theobroma cacao]
Length = 529
Score = 57.4 bits (137), Expect = 2e-06
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = -2
Query: 94 EPKRNFQIVVAATSELGIGKDGKLPWKLPSD 2
+P+R +Q+VVAAT ++GIGKDGKLPWKLPSD
Sbjct: 21 DPQRTYQVVVAATKDMGIGKDGKLPWKLPSD 51