BLASTX nr result
ID: Ephedra27_contig00012454
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra27_contig00012454 (2058 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ESW05690.1| hypothetical protein PHAVU_011G201300g [Phaseolus... 714 0.0 ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub... 714 0.0 ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymer... 714 0.0 ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub... 714 0.0 ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer... 709 0.0 ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer... 708 0.0 ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub... 707 0.0 ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub... 707 0.0 ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymer... 704 0.0 gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma ca... 694 0.0 emb|CBI35100.3| unnamed protein product [Vitis vinifera] 691 0.0 ref|XP_001773955.1| predicted protein [Physcomitrella patens] gi... 687 0.0 ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub... 685 0.0 ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana... 676 0.0 ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arab... 671 0.0 ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutr... 671 0.0 ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat... 663 0.0 ref|XP_006415533.1| hypothetical protein EUTSA_v10006600mg [Eutr... 662 0.0 ref|XP_006464288.1| PREDICTED: probable DNA-directed RNA polymer... 662 0.0 ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer... 662 0.0 >gb|ESW05690.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris] Length = 1180 Score = 714 bits (1843), Expect = 0.0 Identities = 348/651 (53%), Positives = 472/651 (72%), Gaps = 4/651 (0%) Frame = +3 Query: 114 DLVSPHVDSFNYFLERGLDSAVLNLRSVEIRQ--SGNKLRMWLERPCIFSPDKENAEGRH 287 +L H++SF++ ++ GL++ +L+++ +E+ + KLR+WLE P ++ P KE Sbjct: 16 ELFKHHIESFDHMVKAGLETTLLHIKPIEVLDDFTTTKLRIWLENPVVYPPQKERISKTM 75 Query: 288 EQRLMPYECRQAGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGPH 467 + L+P+ECRQA ISY G+ +DVCFQ+NDG VIRE FG+ PIML+S LC+L+ P Sbjct: 76 REALLPFECRQAKISYAGKITIDVCFQYNDGPVIRENVNFGQFPIMLQSKLCNLRGADPK 135 Query: 468 QLVGLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRC 647 +LV +EE +E+GGYFI NG ER+IRLLI PKRN+P+++ R+++ +R YTDKAVV+RC Sbjct: 136 KLVSCKEEASEMGGYFILNGLERVIRLLILPKRNYPMSMVRSSFCDRREGYTDKAVVIRC 195 Query: 648 TRTDQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNS 827 R DQSS++ RLYYL++GSA +GF LR REYL+PVG++LKALID TD EI+ L S N Sbjct: 196 VRADQSSLSIRLYYLRNGSARLGFWLRGREYLLPVGIVLKALIDTTDREIYVNLTSCYNE 255 Query: 828 LSQGQKGVVGTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVG 1007 KG VGT+ V +RA IILDE++ +++T+R+ L++IGE F+ ++ + + S V Sbjct: 256 KYAKGKGAVGTQLVGERAKIILDELRDLSLFTRRQCLEYIGEHFQPIMPELMKDSYAIVA 315 Query: 1008 EALIKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTIS 1187 +A++K+ ILVHLD+ DKFN LIFMLQKLF+L+D T+ PDNPD+LQN E LLPGHL+++ Sbjct: 316 DAVLKDCILVHLDNDFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPGHLISLY 375 Query: 1188 IKEKLQEWLFKVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNL 1367 IKEKL++WL K K +L EI KFD D+A+VKK M+K V SVEN++ TG L Sbjct: 376 IKEKLEDWLQKGKKLLMDEIQKKSNKFDFSDIAQVKKIMDKNSAKLVSASVENLLKTGRL 435 Query: 1368 TXXXXXXXXXXXXMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCP 1547 TV AERLNF RF+SHFR++HRG+ F +RTTTVRKLLPESWGFLCP Sbjct: 436 VTQTGLDLQQRAGYTVQAERLNFLRFMSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCP 495 Query: 1548 VHTPDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQV 1727 VHTPDG PCGLLNH+T C+IT+ D++G++KD KI+K++ +L+++GM SLP++ Sbjct: 496 VHTPDGEPCGLLNHMTRTCRITSFFDSQGNIKDYFKIQKSIRDILMEVGMTSSLPKIFLP 555 Query: 1728 GPPEYLAILLDGRVMGFLSSSKITLAVEQIRSYKLKKGSGIPEDLEVGYIPCSFSGAYPG 1907 GPPE L +LLDG V+G ++SS++ V IR K+ S IP D+EVGY+P S GAYPG Sbjct: 556 GPPEALTVLLDGCVVGCIASSEVEKVVAYIRELKVSSASVIPGDMEVGYVPLSMGGAYPG 615 Query: 1908 LFLFSSPSRFVRPVKSIIDTEN--PCTELIGPFEQAFMEIKCIDGGNGGRK 2054 L+LF+SPSRFVRPVK+I N ELIGPFEQ FMEI+C+DGG+GGRK Sbjct: 616 LYLFTSPSRFVRPVKNISIPSNGSESIELIGPFEQVFMEIRCLDGGDGGRK 666 >ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum lycopersicum] Length = 1184 Score = 714 bits (1843), Expect = 0.0 Identities = 352/653 (53%), Positives = 474/653 (72%), Gaps = 5/653 (0%) Frame = +3 Query: 111 EDLVSPHVDSFNYFLERGLDSAVLNLRSVEIRQSGN--KLRMWLERPCIFSPDKENAEGR 284 ++L S H++SF+Y ++ GL++ +LN++ +EI S + KLR+W +P +F P KE A Sbjct: 29 KELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSLKLRIWFGKPELFPPQKERASKA 88 Query: 285 HEQRLMPYECRQAGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGP 464 L P+ECRQA ISY G+F +D+CFQ+ DG VIRE+ FG+ PIML+S LCHL+ Sbjct: 89 MHDALYPFECRQAKISYSGKFLVDICFQYGDGAVIREKFNFGQFPIMLKSKLCHLRGADD 148 Query: 465 HQ-LVGLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVV 641 + LV +EEP+E+GGYFI G ER+IRL+I PKRN+P ++ RN++R+R Y+DKAVV+ Sbjct: 149 SKKLVAYKEEPSEMGGYFILKGLERVIRLIILPKRNYPTSMARNSFRDRREGYSDKAVVI 208 Query: 642 RCTRTDQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVC 821 RC R DQS+V+ +LYYL +GSA +GF ++ REYL+PVG+ILKAL+D TD EI+ L Sbjct: 209 RCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEIYVNLTCCY 268 Query: 822 NSLSQGQKGVVGTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIA 1001 N KG VGT+ V +RA IILDEV+ +++T+ + L+ IGE F+ V+ GM+ S Sbjct: 269 NEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQPVVIGMQNDSYKT 328 Query: 1002 VGEALIKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLT 1181 V +A++++YI VHLD+ DKFN LIFMLQKLF+L+D T+ DNPD+LQNQE LLPGHL+T Sbjct: 329 VADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEVLLPGHLIT 388 Query: 1182 ISIKEKLQEWLFKVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTG 1361 I +KEKLQ+WL K++ L +E + +K+KF+L + VKKA+EK +G ++E+M+ TG Sbjct: 389 IYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDVKKAIEKNAPKQIGLTIESMLKTG 448 Query: 1362 NLTXXXXXXXXXXXXMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFL 1541 L MTV AE+LNF RFLSHFR++HRG+ F +RTT+VRKLLPESWGFL Sbjct: 449 RLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPESWGFL 508 Query: 1542 CPVHTPDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVS 1721 CPVHTPDG PCGLLNH+T +C+IT+ D++G+VKD K+R ++ VLI +GM PS P++ Sbjct: 509 CPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVLIAIGMTPSSPKLV 568 Query: 1722 QVGPPEYLAILLDGRVMGFLSSSKITLAVEQIRSYKLKKGSGIPEDLEVGYIPCSFSGAY 1901 Q GPPE L++LLDGR+ G++ S I AV +R KL S IP DLEVGYIP S +GAY Sbjct: 569 QAGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLSSTSSIPVDLEVGYIPLSMNGAY 628 Query: 1902 PGLFLFSSPSRFVRPVKSII--DTENPCTELIGPFEQAFMEIKCIDGGNGGRK 2054 PGL+LF+SPSRFVRPV++I E ELIGPFEQ +MEI C DGG+GGRK Sbjct: 629 PGLYLFTSPSRFVRPVRNISAPAEEGNDLELIGPFEQVYMEISCPDGGDGGRK 681 >ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like, partial [Cucumis sativus] Length = 948 Score = 714 bits (1843), Expect = 0.0 Identities = 349/660 (52%), Positives = 478/660 (72%), Gaps = 4/660 (0%) Frame = +3 Query: 87 ESVNVRVYEDLVSPHVDSFNYFLERGLDSAVLNLRSVEIRQS--GNKLRMWLERPCIFSP 260 E+ + +L H++SF++ ++ GL++ + +++ VEI S KLR+WL +P ++ P Sbjct: 7 ENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPP 66 Query: 261 DKENAEGRHEQRLMPYECRQAGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSL 440 KE + L+PYECRQA ISY G+F DVCFQ+++ VIRE+ FG+ PIML+S L Sbjct: 67 QKERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKLNFGQFPIMLKSKL 126 Query: 441 CHLKDLGPHQLVGLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDY 620 CHL+ L P +LV EE +E+GGYF+ NG ER++RLLIAPKRN+P ++ RN++ +R Y Sbjct: 127 CHLRGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFSDRREGY 186 Query: 621 TDKAVVVRCTRTDQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIF 800 TDKAVV+RC R DQSSVT +LYYL++GSA +GF ++ +EYL+P+GV+LKALID TD EI+ Sbjct: 187 TDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIY 246 Query: 801 QQLASVCNSLSQGQKGVVGTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGM 980 L S + KG VGT+ V +RA IILDEV+ ++ R+ L IG+ F+ V+EG+ Sbjct: 247 ASLTSCYSDKHGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGL 306 Query: 981 ERKSDIAVGEALIKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEAL 1160 ++ V +A++K+YI VHLD+ DKFN LIFM QKLF+L+D T+ PDNPD+LQNQ+ L Sbjct: 307 GKEKFSTVADAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVL 366 Query: 1161 LPGHLLTISIKEKLQEWLFKVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSV 1340 LPG L+T+ +KEKL++WL KVK +L+ EI++ + F+ +A VKK M+K + V +V Sbjct: 367 LPGQLITLYLKEKLEDWLQKVKKLLEDEISNPSKNFEFCSLAHVKKVMDKNPSKQVSSAV 426 Query: 1341 ENMINTGNLTXXXXXXXXXXXXMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLL 1520 ENM+ TG L TV AERLNF RF+SHFR++HRG+ F +RTTTVRKLL Sbjct: 427 ENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLL 486 Query: 1521 PESWGFLCPVHTPDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMI 1700 PESWGFLCPVHTPDG PCGLLNHLT C+IT+ +++G V+D KIR ++ +VLI +GMI Sbjct: 487 PESWGFLCPVHTPDGEPCGLLNHLTSTCRITSHFNSQGKVRDFYKIRTSILSVLIAVGMI 546 Query: 1701 PSLPRVSQVGPPEYLAILLDGRVMGFLSSSKITLAVEQIRSYKLKKGSGIPEDLEVGYIP 1880 PSLP++ Q+G P++L +LLDGR++G++SS+++ V +R K+ IP+DLEVGY+P Sbjct: 547 PSLPKLVQMGLPDFLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVP 606 Query: 1881 CSFSGAYPGLFLFSSPSRFVRPVK--SIIDTENPCTELIGPFEQAFMEIKCIDGGNGGRK 2054 S SGAYPGL+LF+SPSRFVRPVK SI +N ELIGPFEQ FMEI+C DGG+GGRK Sbjct: 607 LSISGAYPGLYLFTSPSRFVRPVKNLSISPEDNHNIELIGPFEQVFMEIRCPDGGDGGRK 666 >ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis sativus] Length = 1173 Score = 714 bits (1842), Expect = 0.0 Identities = 349/660 (52%), Positives = 478/660 (72%), Gaps = 4/660 (0%) Frame = +3 Query: 87 ESVNVRVYEDLVSPHVDSFNYFLERGLDSAVLNLRSVEIRQS--GNKLRMWLERPCIFSP 260 E+ + +L H++SF++ ++ GL++ + +++ VEI S KLR+WL +P ++ P Sbjct: 7 ENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPP 66 Query: 261 DKENAEGRHEQRLMPYECRQAGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSL 440 KE + L+PYECRQA ISY G+F DVCFQ+++ VIRE+ FG+ PIML+S L Sbjct: 67 QKERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKFNFGQFPIMLKSKL 126 Query: 441 CHLKDLGPHQLVGLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDY 620 CHL+ L P +LV EE +E+GGYF+ NG ER++RLLIAPKRN+P ++ RN++ +R Y Sbjct: 127 CHLRGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFSDRREGY 186 Query: 621 TDKAVVVRCTRTDQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIF 800 TDKAVV+RC R DQSSVT +LYYL++GSA +GF ++ +EYL+P+GV+LKALID TD EI+ Sbjct: 187 TDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIY 246 Query: 801 QQLASVCNSLSQGQKGVVGTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGM 980 L S + KG VGT+ V +RA IILDEV+ ++ R+ L IG+ F+ V+EG+ Sbjct: 247 ASLTSCYSDKHGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGL 306 Query: 981 ERKSDIAVGEALIKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEAL 1160 ++ V +A++K+YI VHLD+ DKFN LIFM QKLF+L+D T+ PDNPD+LQNQ+ L Sbjct: 307 GKEKFSTVADAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVL 366 Query: 1161 LPGHLLTISIKEKLQEWLFKVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSV 1340 LPG L+T+ +KEKL++WL KVK +L+ EI++ + F+ +A VKK M+K + V +V Sbjct: 367 LPGQLITLYLKEKLEDWLQKVKKLLEDEISNPSKNFEFCSLAHVKKVMDKNPSKQVSSAV 426 Query: 1341 ENMINTGNLTXXXXXXXXXXXXMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLL 1520 ENM+ TG L TV AERLNF RF+SHFR++HRG+ F +RTTTVRKLL Sbjct: 427 ENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLL 486 Query: 1521 PESWGFLCPVHTPDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMI 1700 PESWGFLCPVHTPDG PCGLLNHLT C+IT+ +++G V+D KIR ++ +VLI +GMI Sbjct: 487 PESWGFLCPVHTPDGEPCGLLNHLTSTCRITSHFNSQGKVRDFYKIRTSILSVLIAVGMI 546 Query: 1701 PSLPRVSQVGPPEYLAILLDGRVMGFLSSSKITLAVEQIRSYKLKKGSGIPEDLEVGYIP 1880 PSLP++ Q+G P++L +LLDGR++G++SS+++ V +R K+ IP+DLEVGY+P Sbjct: 547 PSLPKLVQMGLPDFLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVP 606 Query: 1881 CSFSGAYPGLFLFSSPSRFVRPVK--SIIDTENPCTELIGPFEQAFMEIKCIDGGNGGRK 2054 S SGAYPGL+LF+SPSRFVRPVK SI +N ELIGPFEQ FMEI+C DGG+GGRK Sbjct: 607 LSISGAYPGLYLFTSPSRFVRPVKNLSISPEDNHNIELIGPFEQVFMEIRCPDGGDGGRK 666 >ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like [Solanum tuberosum] Length = 1179 Score = 709 bits (1831), Expect = 0.0 Identities = 348/653 (53%), Positives = 473/653 (72%), Gaps = 5/653 (0%) Frame = +3 Query: 111 EDLVSPHVDSFNYFLERGLDSAVLNLRSVEIRQSGN--KLRMWLERPCIFSPDKENAEGR 284 ++L S H++SF+Y ++ GL++ +LN++ +EI S + KLR+W +P +F P KE A Sbjct: 24 KELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSLKLRIWFGKPELFPPQKERASKT 83 Query: 285 HEQRLMPYECRQAGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGP 464 L P+ECRQA +SY G+F +D+CFQ+ DG VIRE+ FG+ PIML+S LCHL+ Sbjct: 84 MHDALYPFECRQAKLSYTGKFLVDICFQYGDGAVIREKFNFGQFPIMLKSKLCHLRGADD 143 Query: 465 -HQLVGLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVV 641 +L+ +EEP+E+GGYFI G ER+IRL+I PKRN+P ++ RN++R+R Y+DKAVV+ Sbjct: 144 SRKLIAYKEEPSEMGGYFILKGLERVIRLIILPKRNYPTSMARNSFRDRREGYSDKAVVI 203 Query: 642 RCTRTDQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVC 821 RC R DQS+V+ +LYYL +GSA +GF ++ REYL+PVG+ILKAL+D TD EI+ L Sbjct: 204 RCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEIYVNLTCCY 263 Query: 822 NSLSQGQKGVVGTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIA 1001 N KG VGT+ V +RA IILDEV+ +++T+ + L+ IGE F+ V+ GM+ S Sbjct: 264 NEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQPVVIGMQNDSYKT 323 Query: 1002 VGEALIKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLT 1181 V +A++++YI VHLD+ DKFN LIFMLQKLF+L+D T+ DNPD+LQNQE LLPGHL+T Sbjct: 324 VADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEVLLPGHLIT 383 Query: 1182 ISIKEKLQEWLFKVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTG 1361 I +KEKLQ+WL K++ L +E + +K+KF+L + VKKA+EK +G ++E+M+ TG Sbjct: 384 IYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDVKKAIEKNAPKQIGLAIESMLKTG 443 Query: 1362 NLTXXXXXXXXXXXXMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFL 1541 L MTV AE+LNF RFLSHFR++HRG+ F +RTT+VRKLLPESWGFL Sbjct: 444 RLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPESWGFL 503 Query: 1542 CPVHTPDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVS 1721 CPVHTPDG PCGLLNH+T +C+IT+ D++G+VKD K+R ++ VLI +GM P P++ Sbjct: 504 CPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVLIAIGMTPPSPKLV 563 Query: 1722 QVGPPEYLAILLDGRVMGFLSSSKITLAVEQIRSYKLKKGSGIPEDLEVGYIPCSFSGAY 1901 Q GPPE L++LLDGR+ G++ S I AV +R KL S IP DLEVGYIP S +GAY Sbjct: 564 QGGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLSSTSSIPVDLEVGYIPLSMNGAY 623 Query: 1902 PGLFLFSSPSRFVRPVKSII--DTENPCTELIGPFEQAFMEIKCIDGGNGGRK 2054 PGL+LF+SPSRFVRPV++I E EL+GPFEQ +MEI C DGG+GGRK Sbjct: 624 PGLYLFTSPSRFVRPVRNISAPAEEGNDLELVGPFEQVYMEISCPDGGDGGRK 676 >ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like isoform X1 [Glycine max] Length = 1175 Score = 708 bits (1828), Expect = 0.0 Identities = 346/651 (53%), Positives = 467/651 (71%), Gaps = 4/651 (0%) Frame = +3 Query: 114 DLVSPHVDSFNYFLERGLDSAVLNLRSVEIRQ--SGNKLRMWLERPCIFSPDKENAEGRH 287 +L H++SF+Y + GL++ + +++ +E+ + KLR+WL+ P ++ P KE Sbjct: 16 ELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPPQKERISRTM 75 Query: 288 EQRLMPYECRQAGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGPH 467 + L+P+ECRQA ISY G+ +DVCFQ+NDG +IRE FG+ PIML+S LC+L+ P Sbjct: 76 REALLPFECRQAKISYAGKITIDVCFQYNDGPIIRENINFGQFPIMLQSKLCNLRGADPQ 135 Query: 468 QLVGLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRC 647 +LV REE +E+GGYFI NG ER+IRLLI PKRNHP+++ RN++ +R YTDKA+V+RC Sbjct: 136 KLVSYREEASEMGGYFILNGLERVIRLLILPKRNHPMSMVRNSFSDRREGYTDKAIVIRC 195 Query: 648 TRTDQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNS 827 R DQSS++ RLYYL++GSA +GF LR REYL+PVG+ILKALID TD EI+ L S N Sbjct: 196 VRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVNLTSCYNE 255 Query: 828 LSQGQKGVVGTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVG 1007 + KG VGT+ V +RA IILDE++ +++T+ + L++IGE F+ V+ ++ S V Sbjct: 256 KYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVITELKNDSYPIVA 315 Query: 1008 EALIKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTIS 1187 EA++K+ ILVHLD+ DKFN LIFMLQKLF+L+D T+ PDNPD+LQN E LLPGHL+T+ Sbjct: 316 EAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPGHLITLY 375 Query: 1188 IKEKLQEWLFKVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNL 1367 +KEKL++WL K K +L EI+ +KFD D+ +VKK M+K V +VENM+ TG L Sbjct: 376 LKEKLEDWLQKGKRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENMLKTGRL 435 Query: 1368 TXXXXXXXXXXXXMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCP 1547 TV AERLNF RF+SHFR++HRG+ F +RTTTVRKLLPESWGFLCP Sbjct: 436 VTQTGLDLQQRAGYTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCP 495 Query: 1548 VHTPDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQV 1727 VHTPDG PCGLLNH+T +IT+ D++G+VKD KI+ ++ VL+++GM PSLP++ Sbjct: 496 VHTPDGEPCGLLNHMTCTSRITSFFDSQGNVKDYFKIKMSILNVLLEVGMTPSLPKIFLP 555 Query: 1728 GPPEYLAILLDGRVMGFLSSSKITLAVEQIRSYKLKKGSGIPEDLEVGYIPCSFSGAYPG 1907 GPPE L +LLDG V+G ++SS+ V IR K+ + IP+D+EVGY+P S GAYPG Sbjct: 556 GPPEALTVLLDGCVVGCIASSEAEKVVAHIRELKVSSAAVIPDDMEVGYVPLSMGGAYPG 615 Query: 1908 LFLFSSPSRFVRPVKSIIDTENPC--TELIGPFEQAFMEIKCIDGGNGGRK 2054 L+L +SPSRFVRPV++I N E IGPFEQ FMEI+C DGG+GGRK Sbjct: 616 LYLCTSPSRFVRPVRNISIPSNGSENIEFIGPFEQVFMEIRCPDGGDGGRK 666 >ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X2 [Glycine max] Length = 1151 Score = 707 bits (1826), Expect = 0.0 Identities = 345/651 (52%), Positives = 470/651 (72%), Gaps = 4/651 (0%) Frame = +3 Query: 114 DLVSPHVDSFNYFLERGLDSAVLNLRSVEIRQ--SGNKLRMWLERPCIFSPDKENAEGRH 287 +L H++SF+Y ++ GLD+ + +++ VE+ + KLR+WL+ P ++ P KE Sbjct: 16 ELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKERISRTM 75 Query: 288 EQRLMPYECRQAGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGPH 467 + L+P+ECRQA ISY G+ +DVCFQ+NDG +IRE FG+ PIML+S LC+L+ P Sbjct: 76 REALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQSKLCNLRGADPQ 135 Query: 468 QLVGLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRC 647 +LV +EE +E+GGYFI NG ER++RLLI PKRN+P+++ RN++ +R YTDKAVV+RC Sbjct: 136 KLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGYTDKAVVIRC 195 Query: 648 TRTDQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNS 827 R DQSS++ RLYYL++GSA +GF LR REYL+PVG+ILKALID TD EI+ L S N Sbjct: 196 VRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVNLTSCYNE 255 Query: 828 LSQGQKGVVGTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVG 1007 + KG VGT+ V +RA IILDE++ +++T+ + L++IGE F+ V+ ++ S V Sbjct: 256 KYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNELKNDSYPIVA 315 Query: 1008 EALIKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTIS 1187 +A++K+ ILVHLD+ DKFN LIFMLQKLF+L+D T+ PDNPD+LQN E LLPGHL+T+ Sbjct: 316 DAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPGHLITLY 375 Query: 1188 IKEKLQEWLFKVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNL 1367 +KEKL++WL K + +L EI+ +KFD D+ +VKK M+K V +VENM+ TG L Sbjct: 376 LKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENMLKTGRL 435 Query: 1368 TXXXXXXXXXXXXMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCP 1547 TV AERLNF RFLSHFR++HRG+ F +RTTTVRKLLPESWGFLCP Sbjct: 436 VTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCP 495 Query: 1548 VHTPDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQV 1727 VHTPDG PCGLLNH+T +IT+ D++G++KD KI+ ++ VL+++GM PSLP++ Sbjct: 496 VHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPSLPKIFLP 555 Query: 1728 GPPEYLAILLDGRVMGFLSSSKITLAVEQIRSYKLKKGSGIPEDLEVGYIPCSFSGAYPG 1907 GPPE L +LLDG V+G ++SS++ V IR K+ + IP+D+EVGY+P S GAYPG Sbjct: 556 GPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVPLSMGGAYPG 615 Query: 1908 LFLFSSPSRFVRPVK--SIIDTENPCTELIGPFEQAFMEIKCIDGGNGGRK 2054 L+L +SPSRFVRPV+ SI + ELIGPFEQ FMEI+C DGG+GGRK Sbjct: 616 LYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEIRCPDGGDGGRK 666 >ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1 [Glycine max] Length = 1175 Score = 707 bits (1826), Expect = 0.0 Identities = 345/651 (52%), Positives = 470/651 (72%), Gaps = 4/651 (0%) Frame = +3 Query: 114 DLVSPHVDSFNYFLERGLDSAVLNLRSVEIRQ--SGNKLRMWLERPCIFSPDKENAEGRH 287 +L H++SF+Y ++ GLD+ + +++ VE+ + KLR+WL+ P ++ P KE Sbjct: 16 ELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKERISRTM 75 Query: 288 EQRLMPYECRQAGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGPH 467 + L+P+ECRQA ISY G+ +DVCFQ+NDG +IRE FG+ PIML+S LC+L+ P Sbjct: 76 REALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQSKLCNLRGADPQ 135 Query: 468 QLVGLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRC 647 +LV +EE +E+GGYFI NG ER++RLLI PKRN+P+++ RN++ +R YTDKAVV+RC Sbjct: 136 KLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGYTDKAVVIRC 195 Query: 648 TRTDQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNS 827 R DQSS++ RLYYL++GSA +GF LR REYL+PVG+ILKALID TD EI+ L S N Sbjct: 196 VRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVNLTSCYNE 255 Query: 828 LSQGQKGVVGTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVG 1007 + KG VGT+ V +RA IILDE++ +++T+ + L++IGE F+ V+ ++ S V Sbjct: 256 KYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNELKNDSYPIVA 315 Query: 1008 EALIKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTIS 1187 +A++K+ ILVHLD+ DKFN LIFMLQKLF+L+D T+ PDNPD+LQN E LLPGHL+T+ Sbjct: 316 DAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPGHLITLY 375 Query: 1188 IKEKLQEWLFKVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNL 1367 +KEKL++WL K + +L EI+ +KFD D+ +VKK M+K V +VENM+ TG L Sbjct: 376 LKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENMLKTGRL 435 Query: 1368 TXXXXXXXXXXXXMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCP 1547 TV AERLNF RFLSHFR++HRG+ F +RTTTVRKLLPESWGFLCP Sbjct: 436 VTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCP 495 Query: 1548 VHTPDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQV 1727 VHTPDG PCGLLNH+T +IT+ D++G++KD KI+ ++ VL+++GM PSLP++ Sbjct: 496 VHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPSLPKIFLP 555 Query: 1728 GPPEYLAILLDGRVMGFLSSSKITLAVEQIRSYKLKKGSGIPEDLEVGYIPCSFSGAYPG 1907 GPPE L +LLDG V+G ++SS++ V IR K+ + IP+D+EVGY+P S GAYPG Sbjct: 556 GPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVPLSMGGAYPG 615 Query: 1908 LFLFSSPSRFVRPVK--SIIDTENPCTELIGPFEQAFMEIKCIDGGNGGRK 2054 L+L +SPSRFVRPV+ SI + ELIGPFEQ FMEI+C DGG+GGRK Sbjct: 616 LYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEIRCPDGGDGGRK 666 >ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like isoform X1 [Cicer arietinum] gi|502078798|ref|XP_004486058.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like isoform X2 [Cicer arietinum] Length = 1177 Score = 704 bits (1817), Expect = 0.0 Identities = 336/661 (50%), Positives = 472/661 (71%), Gaps = 3/661 (0%) Frame = +3 Query: 81 SKESVNVRVYEDLVSPHVDSFNYFLERGLDSAVLNLRSVEIRQ--SGNKLRMWLERPCIF 254 S + N DL+ PH++SF++ ++ GL + + ++ +E+ L++ ++ P IF Sbjct: 11 SLDDANFDALRDLLKPHIESFDHMIDAGLKTMFIGIKPLEVPHPTQPTTLKISMDNPKIF 70 Query: 255 SPDKENAEGRHEQRLMPYECRQAGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRS 434 P KE + L P+ECRQA ISY G F ++CFQ+++G ++RE+ FG+ PIML+S Sbjct: 71 EPQKERGFSKSRNILYPFECRQAKISYTGTFTAELCFQYDNGPIVREKFNFGQFPIMLQS 130 Query: 435 SLCHLKDLGPHQLVGLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGR 614 LC+L+ P +LV +EE +EVGGYFI NG ER++RLLI PKRN+P++ R+++ R Sbjct: 131 KLCNLRGASPKKLVSYKEEASEVGGYFILNGLERVMRLLIMPKRNYPMSTVRSSFSERRE 190 Query: 615 DYTDKAVVVRCTRTDQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAE 794 YTDKAVV+RC R DQ+SV+ +LYYL++GSA +GF + REY++PVG++LKALID TD E Sbjct: 191 GYTDKAVVIRCVRADQTSVSIKLYYLRNGSARLGFWILGREYMLPVGIVLKALIDTTDRE 250 Query: 795 IFQQLASVCNSLSQGQKGVVGTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLE 974 I+ L S N + KG VGT+ V +RA IILDEV+ +++T+ + L++IGE F+ +L+ Sbjct: 251 IYVNLTSCYNEKYEKGKGAVGTQLVGERAKIILDEVRDLSLFTRLQCLQYIGEHFQPILQ 310 Query: 975 GMERKSDIAVGEALIKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQE 1154 G++ +S V +A++++YILVHLD+ DKFN LIFMLQKLF+L+D T+ PDNPD+LQNQE Sbjct: 311 GLKNESHHIVADAVLRDYILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNQE 370 Query: 1155 ALLPGHLLTISIKEKLQEWLFKVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGR 1334 LLPGHL+T+ +KEKL+EWL K K +L EI F+ +A VKK +EK +T G+ Sbjct: 371 VLLPGHLITLYLKEKLEEWLQKGKRLLLDEIEKKGATFEFGRIADVKKVLEKNHTKGIST 430 Query: 1335 SVENMINTGNLTXXXXXXXXXXXXMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRK 1514 ++ENM+ TG L TV AER+NF RF+SHFR++HRGS F +RTTTVRK Sbjct: 431 AIENMLKTGRLVTTTGLDLHQRAGYTVQAERINFLRFISHFRAVHRGSSFAGLRTTTVRK 490 Query: 1515 LLPESWGFLCPVHTPDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLG 1694 LLPESWGFLCPVHTPDG PCGLLNH+T C++T+ D+EG++KD KI+ ++ +L+++G Sbjct: 491 LLPESWGFLCPVHTPDGEPCGLLNHMTRTCRVTSFYDSEGNIKDYFKIKLSILNILVEIG 550 Query: 1695 MIPSLPRVSQVGPPEYLAILLDGRVMGFLSSSKITLAVEQIRSYKLKKGSGIPEDLEVGY 1874 M SLP++ GPPE L +LLDG ++GF+ S+++ V IR K+ + IP D+EVGY Sbjct: 551 MTQSLPKIFLPGPPEVLTVLLDGCIVGFIPSTEVEKVVAHIRELKVSSAAVIPNDMEVGY 610 Query: 1875 IPCSFSGAYPGLFLFSSPSRFVRPVKSI-IDTENPCTELIGPFEQAFMEIKCIDGGNGGR 2051 +P S GAYPGL+LF+SPSRFVRPV+++ I + N ELIGPFEQ FMEI+C DGG+GGR Sbjct: 611 VPLSMGGAYPGLYLFTSPSRFVRPVRNLSIPSTNENVELIGPFEQVFMEIRCPDGGDGGR 670 Query: 2052 K 2054 K Sbjct: 671 K 671 >gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao] Length = 1180 Score = 694 bits (1792), Expect = 0.0 Identities = 340/651 (52%), Positives = 455/651 (69%), Gaps = 4/651 (0%) Frame = +3 Query: 111 EDLVSPHVDSFNYFLERGLDSAVLNLRSVEIRQSGNK--LRMWLERPCIFSPDKENAEGR 284 ++L H++SF+Y ++ GLD + ++ V+I S + LR+WL+ P ++ P K+ + Sbjct: 22 KELFKHHIESFDYMIDEGLDLMLKRVKPVQIFDSSSNKTLRIWLDHPEVYPPQKDRSSKT 81 Query: 285 HEQRLMPYECRQAGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGP 464 L P+ECRQA ISY G F++DVCFQW+ GVV+RE+ FG PIML+S C+L++ P Sbjct: 82 SAGALYPFECRQAKISYTGSFHIDVCFQWDGGVVVREKLNFGEFPIMLKSKRCYLREADP 141 Query: 465 HQLVGLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVR 644 +LV +EE E+GGYFI NG ER++RLLI PKRN+P+++ RN++R+R YTDKAVV+R Sbjct: 142 RKLVACKEESREMGGYFILNGLERVVRLLILPKRNYPMSLVRNSFRDRREGYTDKAVVIR 201 Query: 645 CTRTDQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCN 824 C R D SSVT +LYYL +GSA +GF ++ REY++PVG+ILKALID D EI+ +L N Sbjct: 202 CVRGDLSSVTVKLYYLHNGSARLGFWVQGREYMLPVGIILKALIDTNDREIYTKLTCCYN 261 Query: 825 SLSQGQKGVVGTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAV 1004 + KG VGT+ V +RA IILDEV+ ++TQ + L+ IGE F+ ++EGME +S V Sbjct: 262 EKNGEGKGAVGTQLVGERAKIILDEVQHLALFTQEQCLQHIGEHFQPIMEGMESESYSTV 321 Query: 1005 GEALIKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTI 1184 + +++ YI VHLD DKFN LIFM+QKLF+L+D T+APDN D+LQNQE LLPGHL+TI Sbjct: 322 ADVVLRNYIFVHLDDNNDKFNLLIFMVQKLFSLIDQTSAPDNSDSLQNQEVLLPGHLITI 381 Query: 1185 SIKEKLQEWLFKVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGN 1364 +KEKL++WL K K +++ IN+ + FD M VKK MEK V ++EN++ TG Sbjct: 382 YLKEKLEDWLRKGKKLIEDAINNKSKNFDFCSMKDVKKVMEKNRPTQVSAAIENLLKTGR 441 Query: 1365 LTXXXXXXXXXXXXMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLC 1544 L TV AERLN+ RFLS FR +HRG+ F +RTT+VRKLLPESWGFLC Sbjct: 442 LITQTGLDLQQRAGFTVQAERLNYHRFLSFFRCVHRGASFAGLRTTSVRKLLPESWGFLC 501 Query: 1545 PVHTPDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQ 1724 PVHTPDG PCGLLNH+T C+IT+ ++ G+++D KIR ++ VL+ +GM S P+V Sbjct: 502 PVHTPDGEPCGLLNHMTCTCRITSYYNSPGNIRDFFKIRMSILDVLVGVGMTTSWPKVDH 561 Query: 1725 VGPPEYLAILLDGRVMGFLSSSKITLAVEQIRSYKLKKGSGIPEDLEVGYIPCSFSGAYP 1904 GPP+ L +LLDGRV+G L S + V +R KL S IP+DLEVGY+P S G YP Sbjct: 562 AGPPQVLPVLLDGRVVGSLPSGEAEKVVAHLRRLKLAAASVIPDDLEVGYVPLSLGGTYP 621 Query: 1905 GLFLFSSPSRFVRPVK--SIIDTENPCTELIGPFEQAFMEIKCIDGGNGGR 2051 GL+LF+SPSRFVRPV+ SI + ELIGPFEQ FMEI+C DGGNGGR Sbjct: 622 GLYLFTSPSRFVRPVRNISIPSADGKDIELIGPFEQVFMEIRCPDGGNGGR 672 >emb|CBI35100.3| unnamed protein product [Vitis vinifera] Length = 1113 Score = 691 bits (1784), Expect = 0.0 Identities = 336/629 (53%), Positives = 455/629 (72%), Gaps = 6/629 (0%) Frame = +3 Query: 186 LRSVEIRQSG----NKLRMWLERPCIFSPDKENAEGRHEQRLMPYECRQAGISYKGRFYL 353 ++S+ I +G ++ +W +P ++ P KE + L P+ECRQA ISY G+ Sbjct: 1 MKSLFITHNGVFFLTRIALWFGQPELYPPQKERSARTMRDALYPFECRQAKISYSGKLLA 60 Query: 354 DVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGPHQLVGLREEPTEVGGYFICNGYE 533 DVCFQ+ +GV IRE+ G+ PIML+S LCHL+ P +LV +EE +E+GGYFI NG E Sbjct: 61 DVCFQYGNGVAIREKFNLGQFPIMLKSKLCHLRGADPQKLVSCKEESSEMGGYFILNGLE 120 Query: 534 RLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRCTRTDQSSVTARLYYLQHGSASI 713 R++RLLI PKRN+P+++ RN++R+R YTDKAVV+RC R DQS+VT +LYYL++GSA + Sbjct: 121 RVVRLLILPKRNYPMSMVRNSFRDRREGYTDKAVVIRCVREDQSAVTVKLYYLRNGSARL 180 Query: 714 GFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNSLSQGQKGVVGTEFVTQRAIIIL 893 GF ++ REYL+PVGV+LKALID TD EI++ L + +G KG VGT+ V +R IIL Sbjct: 181 GFWIQGREYLLPVGVVLKALIDTTDHEIYESLTCCYSEKYEGGKGAVGTQLVGERVKIIL 240 Query: 894 DEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVGEALIKEYILVHLDSFCDKFNFL 1073 DEV+ +++T+ + L+ IGE F+ V++G+E +S V +A+++EYI VHLD+ DKFN L Sbjct: 241 DEVRDLSLFTRHQCLQHIGEHFQLVMDGLENESYSIVADAVLREYIFVHLDNNYDKFNLL 300 Query: 1074 IFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTISIKEKLQEWLFKVKSVLDKEIND 1253 IFM+QKLF+L+D T+ PDNPD LQNQE LLPGHL+TI +KEKLQEWL+K + +L EIN Sbjct: 301 IFMVQKLFSLIDQTSVPDNPDVLQNQEVLLPGHLITIYLKEKLQEWLYKARRLLQDEIN- 359 Query: 1254 DKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNLTXXXXXXXXXXXXMTVVAERLN 1433 ++ F+ +A VKK M+K + + +VENM+ TG L MTV AERLN Sbjct: 360 KRKNFEFSSLAHVKKVMDKNPSRQISLAVENMLKTGRLVTQSGLDLQQRAGMTVQAERLN 419 Query: 1434 FFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCPVHTPDGTPCGLLNHLTVNCKIT 1613 F RFLSHFR++HRG+ F +RTT+VRKLLPE+WGFLCPVHTPDG PCGLLNH+ C+IT Sbjct: 420 FLRFLSHFRAVHRGASFAGLRTTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRIT 479 Query: 1614 TDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQVGPPEYLAILLDGRVMGFLSSSK 1793 + D+ G+ +D KIR ++ +VLI +GM P+LP++ Q GPPE L+++LDGRV+G + SS+ Sbjct: 480 SYFDSRGNTRDFFKIRMSILSVLIGIGMTPALPKLVQAGPPEVLSVILDGRVVGSIPSSE 539 Query: 1794 ITLAVEQIRSYKLKKGSGIPEDLEVGYIPCSFSGAYPGLFLFSSPSRFVRPVK--SIIDT 1967 + AV +R K+ S IP+DLEVGYIP S GAYPGL+LF+SPSRFVRPV+ SI Sbjct: 540 VETAVNHLRRLKVSAISVIPDDLEVGYIPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSE 599 Query: 1968 ENPCTELIGPFEQAFMEIKCIDGGNGGRK 2054 E ELIGPFEQ +MEI+C DG +GGR+ Sbjct: 600 EGHDIELIGPFEQVYMEIRCPDGSDGGRR 628 >ref|XP_001773955.1| predicted protein [Physcomitrella patens] gi|162674799|gb|EDQ61303.1| predicted protein [Physcomitrella patens] Length = 1199 Score = 687 bits (1773), Expect = 0.0 Identities = 334/649 (51%), Positives = 470/649 (72%), Gaps = 8/649 (1%) Frame = +3 Query: 84 KESVNVRVYEDLVSPHVDSFNYFLERGLDSAVLNLRSVEIRQ--SGNKLRMWLERPCIFS 257 +E ++ DL PH +SF+YF+ERGL+ AV L+ +E++ SG LR+W+E+P + Sbjct: 34 EEELDCSSLYDLTKPHTESFDYFVERGLEEAVRRLQPIELKHPISGTSLRLWVEKPNVSP 93 Query: 258 PDKENAEGRHEQRLMPYECRQAGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSS 437 P K+ +QRL+P ECR AG++Y+G F D+C QWN+GVV+R +G++P+M++SS Sbjct: 94 PMKDLGSQALDQRLLPSECRLAGLTYRGIFTADICMQWNNGVVVRHNISYGKMPVMVKSS 153 Query: 438 LCHLKDLGPHQLVGLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRD 617 +CHL+ L QLV +EE TE+GGYFICNG ER+IRLLI PKRN+ + V+R +Y+NRG Sbjct: 154 VCHLRGLNQKQLVAAKEEATEMGGYFICNGNERIIRLLIMPKRNYVVGVKRTSYKNRGPS 213 Query: 618 YTDKAVVV-RCTRTDQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAE 794 Y+DK V++ RC R DQS+VT R+YY+ +GSAS+GFS+RR+E+LIPVG+ILKALI+ + E Sbjct: 214 YSDKGVMISRCVRPDQSAVTMRMYYMNYGSASLGFSVRRQEFLIPVGIILKALIESNEYE 273 Query: 795 IFQQLASVCNSLSQGQKGVVGTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLE 974 I++QL S+ S S+ KG +G++FV+QRA IIL+EV+Q +++T+ + L+F+G L Sbjct: 274 IYEQLMSI-QSDSKAMKGALGSQFVSQRAKIILEEVRQLSLFTRHDCLQFLGGLTCYFLL 332 Query: 975 GMERKSDIAVGEALIKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQE 1154 +VGE ++ +YILVHLD+ DKFN L+FMLQKLFALVDG AAPDN D LQN E Sbjct: 333 VK------SVGEQVLNDYILVHLDNPLDKFNLLVFMLQKLFALVDGMAAPDNADALQNHE 386 Query: 1155 ALLPGHLLTISIKEKLQEWLFKVKSVLDKEINDDKQKFDLQD-----MARVKKAMEKIYT 1319 LLPGHLLTI +K+++Q+WL +V+ L KE+ + + DLQ + V+K EK+ Sbjct: 387 ILLPGHLLTIVVKDRIQDWLLRVQGQLLKEMKEKPAENDLQQPIDVTVKHVQKVFEKVPA 446 Query: 1320 DGVGRSVENMINTGNLTXXXXXXXXXXXXMTVVAERLNFFRFLSHFRSIHRGSYFTQMRT 1499 V + VE ++NTGNL T+VAE+LNF R+LSHFRS+HRG++F +RT Sbjct: 447 SDVSKKVEYLLNTGNLVSQSGLDLNQVGGFTLVAEKLNFLRYLSHFRSVHRGAFFATLRT 506 Query: 1500 TTVRKLLPESWGFLCPVHTPDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTV 1679 TTVRKLLPESWGF+CPVHTPDG+PCGLLNHLT C+I++D+DA G+ KDP+ IRK++T V Sbjct: 507 TTVRKLLPESWGFMCPVHTPDGSPCGLLNHLTAACQISSDLDARGNKKDPLAIRKSVTKV 566 Query: 1680 LIDLGMIPSLPRVSQVGPPEYLAILLDGRVMGFLSSSKITLAVEQIRSYKLKKGSGIPED 1859 +++LG++P LP++S + PPEYL +LLDG V+G L++ I +E +R K+ GS +P D Sbjct: 567 MVNLGLVPVLPKLSNMAPPEYLTVLLDGCVIGHLATGAIPSIIEHLRRLKVVDGSEVPAD 626 Query: 1860 LEVGYIPCSFSGAYPGLFLFSSPSRFVRPVKSIIDTENPCTELIGPFEQ 2006 +E+ YIPC+ +G+YPGL+L ++PSRF R VK + + ELIGP EQ Sbjct: 627 MEIAYIPCTSAGSYPGLYLATTPSRFTRTVKQMFG--DGSLELIGPLEQ 673 >ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis vinifera] Length = 1142 Score = 685 bits (1767), Expect = 0.0 Identities = 338/649 (52%), Positives = 460/649 (70%), Gaps = 2/649 (0%) Frame = +3 Query: 114 DLVSPHVDSFNYFLERGLDSAVLNLRSVEIRQSGNKLRMWLERPCIFSPDKENAEGRHEQ 293 +L H+DSF++ +E GL++ +++++ +S +R Sbjct: 13 ELFQHHIDSFDHLVEFGLETLLMSVKP----RSARTMR---------------------D 47 Query: 294 RLMPYECRQAGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGPHQL 473 L P+ECRQA ISY G+ DVCFQ+ +GV IRE+ G+ PIML+S LCHL+ P +L Sbjct: 48 ALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQFPIMLKSKLCHLRGADPQKL 107 Query: 474 VGLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRCTR 653 V +EE +E+GGYFI NG ER++RLLI PKRN+P+++ RN++R+R YTDKAVV+RC R Sbjct: 108 VSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREGYTDKAVVIRCVR 167 Query: 654 TDQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNSLS 833 DQS+VT +LYYL++GSA +GF ++ REYL+PVGV+LKALID TD EI++ L + Sbjct: 168 EDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEIYESLTCCYSEKY 227 Query: 834 QGQKGVVGTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVGEA 1013 +G KG VGT+ V +R IILDEV+ +++T+ + L+ IGE F+ V++G+E +S V +A Sbjct: 228 EGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDGLENESYSIVADA 287 Query: 1014 LIKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTISIK 1193 +++EYI VHLD+ DKFN LIFM+QKLF+L+D T+ PDNPD LQNQE LLPGHL+TI +K Sbjct: 288 VLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEVLLPGHLITIYLK 347 Query: 1194 EKLQEWLFKVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGNLTX 1373 EKLQEWL+K + +L EIN ++ F+ +A VKK M+K + + +VENM+ TG L Sbjct: 348 EKLQEWLYKARRLLQDEIN-KRKNFEFSSLAHVKKVMDKNPSRQISLAVENMLKTGRLVT 406 Query: 1374 XXXXXXXXXXXMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLCPVH 1553 MTV AERLNF RFLSHFR++HRG+ F +RTT+VRKLLPE+WGFLCPVH Sbjct: 407 QSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPEAWGFLCPVH 466 Query: 1554 TPDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQVGP 1733 TPDG PCGLLNH+ C+IT+ D+ G+ +D KIR ++ +VLI +GM P+LP++ Q GP Sbjct: 467 TPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMTPALPKLVQAGP 526 Query: 1734 PEYLAILLDGRVMGFLSSSKITLAVEQIRSYKLKKGSGIPEDLEVGYIPCSFSGAYPGLF 1913 PE L+++LDGRV+G + SS++ AV +R K+ S IP+DLEVGYIP S GAYPGL+ Sbjct: 527 PEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYIPLSMGGAYPGLY 586 Query: 1914 LFSSPSRFVRPVK--SIIDTENPCTELIGPFEQAFMEIKCIDGGNGGRK 2054 LF+SPSRFVRPV+ SI E ELIGPFEQ +MEI+C DG +GGR+ Sbjct: 587 LFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRR 635 >ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana] gi|332193031|gb|AEE31152.1| nuclear RNA polymerase A2 [Arabidopsis thaliana] Length = 1178 Score = 676 bits (1744), Expect = 0.0 Identities = 336/651 (51%), Positives = 467/651 (71%), Gaps = 5/651 (0%) Frame = +3 Query: 114 DLVSPHVDSFNYFLERGLDSAVLNLRSVEIRQSG--NKLRMWLERPCIFSPDKENAEGR- 284 +LV+ H++SF+Y +GLD ++ V + N+L +WLE P +F+P KE+ + Sbjct: 21 NLVTHHIESFDYMTLKGLDVMFNRIKPVSVYDPNTENELSIWLENPLVFAPQKESFKSTS 80 Query: 285 HEQRLMPYECRQAGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGP 464 ++ L+P+ECRQA ISY G F DVCF++NDGVV+R++ FG+ PIML S LC LK Sbjct: 81 RKEPLLPFECRQAKISYTGTFMADVCFKYNDGVVVRDKFDFGQFPIMLMSKLCSLKGADC 140 Query: 465 HQLVGLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVR 644 +L+ +E +E+GGYFI NG ER+ R +IAPKRNHP ++ RN++R+R Y+ KAVV R Sbjct: 141 RKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRNHPTSMIRNSFRDRKEGYSSKAVVTR 200 Query: 645 CTRTDQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCN 824 C R DQSSVT +LYYL++GSA +GF + REYL+PVG++LKAL + D EI++ L + C Sbjct: 201 CVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIYESL-NCCY 259 Query: 825 SLSQGQ-KGVVGTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIA 1001 S G+ G +GT+ V +RA IILDEV+ ++T+ + K +G+ F+ VL+G++++S Sbjct: 260 SEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGVKKESLSI 319 Query: 1002 VGEALIKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLT 1181 V EA++++Y+ VHLD+ DKFN LIF++QKL++LVD T+ PDNPD+LQNQE L+PGH++T Sbjct: 320 VAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLPDNPDSLQNQEILVPGHVIT 379 Query: 1182 ISIKEKLQEWLFKVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMINTG 1361 I +KEKL+EWL K KS+L E+++ KF + +A VKK + K +G S+E ++ TG Sbjct: 380 IYLKEKLEEWLRKCKSLLKDELDNTNSKFSFESLADVKKLINKNPPRSIGTSIETLLKTG 439 Query: 1362 NLTXXXXXXXXXXXXMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFL 1541 L TV AERLNF RFLS FR++HRG+ F +RTTTVRKLLPESWGFL Sbjct: 440 ALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTTVRKLLPESWGFL 499 Query: 1542 CPVHTPDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVS 1721 CPVHTPDGTPCGLLNH+T +IT+ D++G+++D +KIRK++ VL GM+PSLP++ Sbjct: 500 CPVHTPDGTPCGLLNHMTRTSRITSQFDSKGNIRDFLKIRKSVVDVLTGAGMVPSLPKLV 559 Query: 1722 QVGPPEYLAILLDGRVMGFLSSSKITLAVEQIRSYKLKKGSGIPEDLEVGYIPCSFSGAY 1901 + GPP+ + +LLDG+V+G LSS+ +T V IR K++ S IPEDLEVGY+P S G+Y Sbjct: 560 RAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYIRRLKVEAPSVIPEDLEVGYVPTSMGGSY 619 Query: 1902 PGLFLFSSPSRFVRPVKSI-IDTENPCTELIGPFEQAFMEIKCIDGGNGGR 2051 PGL+L S P+RF+RPVK+I I ++N ELIGPFEQ FMEI C DGGNGGR Sbjct: 620 PGLYLASCPARFIRPVKNISIPSDN--IELIGPFEQVFMEISCPDGGNGGR 668 >ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arabidopsis lyrata subsp. lyrata] gi|297339431|gb|EFH69848.1| hypothetical protein ARALYDRAFT_313639 [Arabidopsis lyrata subsp. lyrata] Length = 1188 Score = 671 bits (1732), Expect = 0.0 Identities = 332/664 (50%), Positives = 468/664 (70%), Gaps = 12/664 (1%) Frame = +3 Query: 96 NVRVYEDLVSPHVDSFNYFLERGLDSAVLNLRSVEIRQSGNK---------LRMWLERPC 248 +++ +LV+ H++SF+Y ++GLD ++ V + + + +WLE P Sbjct: 15 DLKELHNLVTHHIESFDYMTQKGLDVMFNRIKPVSVYDPNTENELSNILFFMILWLENPV 74 Query: 249 IFSPDKENAEGR-HEQRLMPYECRQAGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIM 425 +F+P KE+ ++ L+P+ECRQA ISY G F DVCF++NDGVV+R++ FG+ PIM Sbjct: 75 VFAPQKESFRSTSRKEPLLPFECRQAKISYTGTFMADVCFKYNDGVVVRDRFDFGQFPIM 134 Query: 426 LRSSLCHLKDLGPHQLVGLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRN 605 L S LC L+ +L+ +E +E+GGYFI NG ER+ R +IAPKRNHP ++ RN++R+ Sbjct: 135 LMSKLCSLRGADCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRNHPTSMIRNSFRD 194 Query: 606 RGRDYTDKAVVVRCTRTDQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVT 785 R YT+KAVV RC R DQSSVT +LYYL++GSA +GF + REYL+PVG++LKAL + Sbjct: 195 RKEGYTEKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNTC 254 Query: 786 DAEIFQQLASVCNSLSQGQ-KGVVGTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFK 962 D EI++ L + C S G+ G +GT+ + +RA IILDEV+ ++T+ + K +G+ F+ Sbjct: 255 DEEIYESL-NCCYSEHYGRGDGAIGTQLIRERAKIILDEVRDLGLFTREQCRKHLGQHFQ 313 Query: 963 TVLEGMERKSDIAVGEALIKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTL 1142 VL+G+E++S V EA++++Y+ VHLD+ DKFN LIF++QKL++LVD T+ PDNPD+L Sbjct: 314 PVLDGLEKESHPMVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLPDNPDSL 373 Query: 1143 QNQEALLPGHLLTISIKEKLQEWLFKVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTD 1322 QNQE L+PGH++TI +KEKL++WL K KS+L E+ + KF + +A VKK + K Sbjct: 374 QNQEILVPGHVITIYLKEKLEDWLRKCKSLLKDELLNTSSKFSFESLADVKKLINKNPPR 433 Query: 1323 GVGRSVENMINTGNLTXXXXXXXXXXXXMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTT 1502 +G S+E ++ TG L TV AERLNF RFLS FR++HRG+ F +RTT Sbjct: 434 SIGTSIETLLKTGALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTT 493 Query: 1503 TVRKLLPESWGFLCPVHTPDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVL 1682 TVRKLLPESWGFLCPVHTPDGTPCGLLNH+T +IT+ D++G+++D +KIRK++ VL Sbjct: 494 TVRKLLPESWGFLCPVHTPDGTPCGLLNHMTCTSRITSQFDSKGNIRDFLKIRKSVVEVL 553 Query: 1683 IDLGMIPSLPRVSQVGPPEYLAILLDGRVMGFLSSSKITLAVEQIRSYKLKKGSGIPEDL 1862 GM+ SLP++ + GPP+ + +LLDG+V+G LSS+ +T V +R K++ S IPEDL Sbjct: 554 TGAGMVSSLPKLVRAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYLRRLKVEAPSVIPEDL 613 Query: 1863 EVGYIPCSFSGAYPGLFLFSSPSRFVRPVKSI-IDTENPCTELIGPFEQAFMEIKCIDGG 2039 EVGY+P S G+YPGL+L S P+RF+RPVK+I I +EN ELIGPFEQ FMEI C DGG Sbjct: 614 EVGYVPISMGGSYPGLYLASCPARFIRPVKNISIPSEN--IELIGPFEQVFMEISCPDGG 671 Query: 2040 NGGR 2051 NGGR Sbjct: 672 NGGR 675 >ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutrema salsugineum] gi|557093303|gb|ESQ33885.1| hypothetical protein EUTSA_v10006599mg [Eutrema salsugineum] Length = 1183 Score = 671 bits (1730), Expect = 0.0 Identities = 335/671 (49%), Positives = 463/671 (69%), Gaps = 11/671 (1%) Frame = +3 Query: 72 DMDSKESVNVRVYED------LVSPHVDSFNYFLERGLDSAVLNLRSVEIRQSGN--KLR 227 D+ K+ V ED LV+ H++SF+Y E+GL ++ V + + KL Sbjct: 2 DVKEKKKDTVPKIEDFTELHNLVTHHIESFDYMTEKGLAVMFSRIKPVTVYEPSTERKLS 61 Query: 228 MWLERPCIFSPDKENAEGR-HEQRLMPYECRQAGISYKGRFYLDVCFQWN-DGVVIREQC 401 +WLE P ++SP KE+ ++ L P+ECRQA ISY G ++CF+++ D V+R++ Sbjct: 62 IWLEDPRVYSPQKESLRSTSRKEALFPFECRQAKISYTGSLMAEICFRYDEDEYVVRDRY 121 Query: 402 QFGRIPIMLRSSLCHLKDLGPHQLVGLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLA 581 +FG PIML S LCHL+ QL+ +E +E+GGYFI NG ER+ R +IAPKRNHP Sbjct: 122 EFGEFPIMLMSKLCHLRGADCRQLLKYKESTSEMGGYFILNGIERVFRCVIAPKRNHPTG 181 Query: 582 VERNTYRNRGRDYTDKAVVVRCTRTDQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVI 761 + RN++ R Y+DKAV +RC R DQSSVT +LYYL++GSA +GF + REYL+PVGV+ Sbjct: 182 MVRNSFCGRREGYSDKAVAIRCVRDDQSSVTVKLYYLRNGSARVGFWIGAREYLLPVGVV 241 Query: 762 LKALIDVTDAEIFQQLASVCNSLSQGQKGVVGTEFVTQRAIIILDEVKQYNIYTQREALK 941 LKAL + D EI++ L N G +GT+ + +R+ IILDEV+ ++T+ + K Sbjct: 242 LKALTETNDEEIYENLTCCYNERYGRGDGAIGTQLIRERSKIILDEVRDLGLFTRDQCRK 301 Query: 942 FIGERFKTVLEGMERKSDIAVGEALIKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAA 1121 ++GERF+ L+G+E++S V EA++K YI VHLD+ DKFN LIF++QKLF+LVD T+ Sbjct: 302 YLGERFQPALDGLEKESYPTVAEAVLKNYIFVHLDNDDDKFNLLIFLIQKLFSLVDQTSL 361 Query: 1122 PDNPDTLQNQEALLPGHLLTISIKEKLQEWLFKVKSVLDKEINDDKQKFDLQDMARVKKA 1301 PDNPD+LQNQE L+PGHL+TI +KEKL+EWL K KS+++ E N K KF + +A VKK Sbjct: 362 PDNPDSLQNQEILVPGHLITIYLKEKLEEWLRKCKSLIEDEFNRSK-KFSFETIADVKKI 420 Query: 1302 MEKIYTDGVGRSVENMINTGNLTXXXXXXXXXXXXMTVVAERLNFFRFLSHFRSIHRGSY 1481 + K +G S+E ++ +G L TV AERLNF RFLS FR++HRG+ Sbjct: 421 INKNPPRSIGMSIETLLKSGRLNTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGAS 480 Query: 1482 FTQMRTTTVRKLLPESWGFLCPVHTPDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIR 1661 F +RTTTVRKLLPESWGFLCPVHTPDG PCGLLNH+T C+IT+ D+ G+++D +KIR Sbjct: 481 FAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTCRITSQFDSNGNIRDFLKIR 540 Query: 1662 KALTTVLIDLGMIPSLPRVSQVGPPEYLAILLDGRVMGFLSSSKITLAVEQIRSYKLKKG 1841 K++ VL+ +GM+PSLP++ + GPP+ + +LLDG+V+G LSS+ +T V +R K++ Sbjct: 541 KSVVDVLVGVGMVPSLPKLVRAGPPKVITVLLDGQVVGSLSSNLVTEVVAYLRRLKVEAP 600 Query: 1842 SGIPEDLEVGYIPCSFSGAYPGLFLFSSPSRFVRPVK-SIIDTENPCTELIGPFEQAFME 2018 S IPEDLEVGY+P S G+YPGL+L S PSRF+RPVK + + ++N EL+GPFEQ FME Sbjct: 601 SVIPEDLEVGYVPTSMGGSYPGLYLASCPSRFIRPVKNNSVPSDN--IELVGPFEQVFME 658 Query: 2019 IKCIDGGNGGR 2051 I C DGGNGGR Sbjct: 659 ISCPDGGNGGR 669 >ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis] gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis] Length = 1159 Score = 663 bits (1710), Expect = 0.0 Identities = 338/655 (51%), Positives = 455/655 (69%), Gaps = 8/655 (1%) Frame = +3 Query: 111 EDLVSPHVDSFNYFLERGLDSAVLNLRSVEIRQSGNKLRMWLERPCIFSPDKENAEGRHE 290 ++L H+DSF+Y +ERGL+ + N++ E++ +H+ Sbjct: 22 QELTRHHIDSFDYMIERGLEIMLDNIKP------------------------ESSRTKHK 57 Query: 291 QRLMPYECRQAGISYKGRFYLDVCFQWNDGVVIREQCQFGRIPIMLRSSLCHLKDLGPHQ 470 RL+P+ECRQA ISY G+F DVCF+++ VIRE+ FG++PIML+S LCHL + Q Sbjct: 58 -RLLPFECRQAKISYTGKFEADVCFEYHGKAVIREKYNFGQLPIMLKSRLCHLYGVDSQQ 116 Query: 471 LVGLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRCT 650 LV EE E+GGYFI NG ER++RLLI PKRN+P++ R ++R+R YTDKAVV+RC Sbjct: 117 LVSFNEESAEMGGYFILNGLERVVRLLIMPKRNYPMSTVRGSFRDRREGYTDKAVVIRCV 176 Query: 651 R------TDQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLA 812 R TDQSSV+ +LYYL+ GSA +GF ++ REYL+P G++LKAL + TD EI+++L Sbjct: 177 REYQSSLTDQSSVSVKLYYLRSGSARLGFWIQGREYLLPAGIVLKALAETTDREIYEKLT 236 Query: 813 SVCNSLSQGQKGVVGTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKS 992 + + KG VG++ V +RA IILDEV+ +++TQ E L+ IGE F+ V++G+E+++ Sbjct: 237 CCYDEKYEKAKGAVGSQLVGERAKIILDEVRDLSLFTQSECLRHIGEHFQPVMDGLEKET 296 Query: 993 DIAVGEALIKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGH 1172 V A++K+YI VHL+++ DKFN LIFMLQKLF+LVD T+ DNPD+LQNQE LLPGH Sbjct: 297 FSNVAHAVLKDYIFVHLNNYDDKFNLLIFMLQKLFSLVDQTSVVDNPDSLQNQEVLLPGH 356 Query: 1173 LLTISIKEKLQEWLFKVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTDGVGRSVENMI 1352 L+TI +KEKL+EWL K K VL +EI + F+ + VKK ++K + + +VENM+ Sbjct: 357 LVTIYLKEKLEEWLRKAKKVLQEEIAKNNN-FNFLSVLDVKKVIDKNPSTTISLAVENML 415 Query: 1353 NTGNLTXXXXXXXXXXXXMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESW 1532 TG L TV AERLNF RFLS FR++HRG+ F +RTT+VRKLLPESW Sbjct: 416 KTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTSVRKLLPESW 475 Query: 1533 GFLCPVHTPDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLP 1712 GFLCPVHTPDG PCGLLNH+T +C+IT+ D++G VKD IRK++ VL LGM SLP Sbjct: 476 GFLCPVHTPDGEPCGLLNHMTRSCRITSYFDSQGAVKDFFDIRKSILGVLTSLGMTSSLP 535 Query: 1713 RVSQVGPPEYLAILLDGRVMGFLSSSKITLAVEQIRSYKLKKGSGIPEDLEVGYIPCSFS 1892 ++ Q GPP+ L++LLDGRV+G + SS++ V +R K+ S IP+DLEVGY+P S Sbjct: 536 KLVQAGPPQVLSVLLDGRVVGSIPSSQVEKVVVHLRRLKVAASSVIPDDLEVGYVPLSMG 595 Query: 1893 GAYPGLFLFSSPSRFVRPVK--SIIDTENPCTELIGPFEQAFMEIKCIDGGNGGR 2051 GA+PGL+LF+SPSRF+RPVK SI E ELIGPFEQ FMEI+C DGGNGGR Sbjct: 596 GAFPGLYLFTSPSRFIRPVKNISIPAGEGENIELIGPFEQVFMEIRCPDGGNGGR 650 >ref|XP_006415533.1| hypothetical protein EUTSA_v10006600mg [Eutrema salsugineum] gi|557093304|gb|ESQ33886.1| hypothetical protein EUTSA_v10006600mg [Eutrema salsugineum] Length = 1181 Score = 662 bits (1709), Expect = 0.0 Identities = 324/650 (49%), Positives = 457/650 (70%), Gaps = 4/650 (0%) Frame = +3 Query: 114 DLVSPHVDSFNYFLERGLDSAVLNLRSVEIRQSGNKLRMWLERPCIFSPDKENAEGRHEQ 293 +LV+ H++SF+Y E+GL ++ V + SGNKL +WL+ P ++ P KE+ Q Sbjct: 20 NLVTHHIESFDYMTEKGLAVMFNRIKPVSVYDSGNKLSIWLDNPVVYPPQKESPSSTSRQ 79 Query: 294 R-LMPYECRQAGISYKGRFYLDVCFQWNDGV-VIREQCQFGRIPIMLRSSLCHLKDLGPH 467 L P+ECRQA ISY G+ +VC Q+ND VIR++ FG +PIML S LC+L+ Sbjct: 80 EALFPFECRQAKISYTGKLMAEVCLQYNDEPPVIRDKFDFGELPIMLMSKLCNLRGADCR 139 Query: 468 QLVGLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYRNRGRDYTDKAVVVRC 647 +L+ +E +E+GGYFI G E++ R +IAPKRNHP+ + RN++ +R ++DKAV +RC Sbjct: 140 KLLKYKEATSEMGGYFILKGIEKVFRCVIAPKRNHPMGMVRNSFIHRQEGFSDKAVSIRC 199 Query: 648 TRTDQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDVTDAEIFQQLASVCNS 827 R DQSSVT +LYY+++GSA +GF L +EYL+PVG++LKAL + D EI++ L N Sbjct: 200 VRDDQSSVTIKLYYVRNGSARVGFWLGGKEYLLPVGIVLKALTETNDEEIYENLNCCYNE 259 Query: 828 LSQGQKGVVGTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFKTVLEGMERKSDIAVG 1007 + G +GT+ V +R+ IILDEV+ ++T+ + K++GERF+ L+G+E++S V Sbjct: 260 RFERCDGAIGTQLVRERSKIILDEVRDLGLFTRDQCRKYLGERFQPALDGLEKESYPTVA 319 Query: 1008 EALIKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTLQNQEALLPGHLLTIS 1187 +A++K YI VHLD+ DKFN LIF++QKLF+LVD T+ PDNPD+LQNQE L+PGHL+TI Sbjct: 320 DAVLKNYIFVHLDNDDDKFNLLIFLIQKLFSLVDQTSLPDNPDSLQNQEILVPGHLITIY 379 Query: 1188 IKEKLQEWLFKVKSVLDKEINDDK-QKFDLQDMARVKKAMEKIYTDGVGRSVENMINTGN 1364 +KEKL+ WL K KS++++E ++K +K+ + A VKK M + + +G S+ + G Sbjct: 380 LKEKLEVWLRKCKSIIEQEFGNNKSKKYSFESHADVKKLMNRNPSSSIGTSIGTFLTRGE 439 Query: 1365 LTXXXXXXXXXXXXMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTTTVRKLLPESWGFLC 1544 + TV AERLNF RFLS FR++HRG+ F +RTTTVRKLLPESWGFLC Sbjct: 440 IHTQYGLDFPESKGFTVQAERLNFIRFLSFFRAVHRGASFADLRTTTVRKLLPESWGFLC 499 Query: 1545 PVHTPDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVLIDLGMIPSLPRVSQ 1724 PVHTPDGTPCGLLNH+T C+IT+ D+ G+++D KIRK++ VL+ +GM+ SLP++ + Sbjct: 500 PVHTPDGTPCGLLNHMTRTCRITSQFDSNGNIRDFQKIRKSVVDVLVGVGMVCSLPKLVR 559 Query: 1725 VGPPEYLAILLDGRVMGFLSSSKITLAVEQIRSYKLKKGSGIPEDLEVGYIPCSFSGAYP 1904 GPP+ + +LLDG+V+G LSS+ +T V +R K++ S IPEDLEVGY+P S G+YP Sbjct: 560 AGPPKVIPVLLDGQVVGSLSSNLVTEVVAYLRKLKVEAPSVIPEDLEVGYVPTSMGGSYP 619 Query: 1905 GLFLFSSPSRFVRPVKS-IIDTENPCTELIGPFEQAFMEIKCIDGGNGGR 2051 GL+L S PSRF+RPVK+ + ++N ELIGPFEQ FMEI C DGGNGGR Sbjct: 620 GLYLASCPSRFIRPVKNKSVPSDN--IELIGPFEQVFMEISCPDGGNGGR 667 >ref|XP_006464288.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like isoform X2 [Citrus sinensis] Length = 954 Score = 662 bits (1708), Expect = 0.0 Identities = 330/666 (49%), Positives = 461/666 (69%), Gaps = 6/666 (0%) Frame = +3 Query: 75 MDSKESVNVRVYEDLVSPHVDSFNYFLERGLDSAVLNLRSVEIRQS--GNKLRMWLERPC 248 M K+S + +LV H++SF+Y L+ GL ++++V + S +L++ + P Sbjct: 1 MARKKSADFEPLRELVRHHIESFDYMLDEGLSEMFDHVKTVFVHDSFTNKRLKISVGNPE 60 Query: 249 IFSPDKENAEGRHEQRLMPYECRQAGISYKGRFYLDVCFQWNDG--VVIREQCQFGRIPI 422 IF P KE L+P+ECRQA ISY G+ DV FQ+ D V+RE+ FG+ P+ Sbjct: 61 IFPPQKEQGSKTLRDALLPFECRQAKISYTGKLMADVEFQYLDAGSPVVRERFNFGQFPV 120 Query: 423 MLRSSLCHLKDLGPHQLVGLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYR 602 ML++ CHL+ +LV L+EE E+GGYFI NG ER+ R +I PK+N+P+++ R+++R Sbjct: 121 MLKTRRCHLQGADSQKLVSLKEEAAEMGGYFILNGLERVFRSVILPKQNYPMSMVRSSFR 180 Query: 603 NRGRDYTDKAVVVRCTRTDQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDV 782 +R YTDKAVV+RC R DQSSVT +LYYL +GS +GF L+ +EYL+PVG++LKAL+D Sbjct: 181 DRREGYTDKAVVIRCVRKDQSSVTLKLYYLLNGSVRLGFWLQGKEYLLPVGIVLKALVDT 240 Query: 783 TDAEIFQQLASVCNSLSQGQKGVVGTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFK 962 D EIF L + + +KG VG+ V++R IIL EV+ ++ T+ + L+ IGE F+ Sbjct: 241 NDLEIFNHLTCCYDEKYKKEKGAVGSPLVSERVKIILAEVQDLSLTTRLQCLQHIGEHFQ 300 Query: 963 TVLEGMERKSDIAVGEALIKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTL 1142 V++G++ +S AV E +I++YI VHL+ DKFN LIFMLQKLF+LVD T+ DNPD+L Sbjct: 301 PVIDGLQSESYYAVAETVIRDYIFVHLNDNNDKFNLLIFMLQKLFSLVDHTSVSDNPDSL 360 Query: 1143 QNQEALLPGHLLTISIKEKLQEWLFKVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTD 1322 QNQE LLPGHL+TI +KEKL++WL K K ++ EI ++ +KFD ++A +KK MEK + Sbjct: 361 QNQEILLPGHLITIYLKEKLEDWLRKGKKLIQDEIENNGKKFDFFNLANIKKVMEKNPSK 420 Query: 1323 GVGRSVENMINTGNLTXXXXXXXXXXXXMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTT 1502 +G S+E M+ TG L TV AERLNF RF+S FR++HRG+ F +RTT Sbjct: 421 QIGTSIETMLKTGRLATQTGLDLQQRAGYTVQAERLNFLRFISFFRAVHRGASFAGLRTT 480 Query: 1503 TVRKLLPESWGFLCPVHTPDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVL 1682 +VRKLLPESWGFLCPVHTPDG PCGLLNH+T C++ + D+ G+++D K+R ++ VL Sbjct: 481 SVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVASYYDSRGNIRDFSKMRTSILRVL 540 Query: 1683 IDLGMIPSLPRVSQVGPPEYLAILLDGRVMGFLSSSKITLAVEQIRSYKLKKGSGIPEDL 1862 I +GMIPSLP++ + GPP L++LLDGRV+G + SS+I V +R K+ S IP+DL Sbjct: 541 IGVGMIPSLPKLVKSGPPAVLSVLLDGRVVGVIPSSEIEKVVAHLRRLKVSAASVIPDDL 600 Query: 1863 EVGYIPCSFSGAYPGLFLFSSPSRFVRPVK--SIIDTENPCTELIGPFEQAFMEIKCIDG 2036 EVGY+P S GAYPGL+LF+SP +FVRPV+ S+ E+ ELIGPFEQ FMEI+C DG Sbjct: 601 EVGYVPLSLGGAYPGLYLFTSPPKFVRPVRNISLPSEESQNIELIGPFEQVFMEIRCPDG 660 Query: 2037 GNGGRK 2054 G+GGR+ Sbjct: 661 GDGGRR 666 >ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like isoform X1 [Citrus sinensis] Length = 1175 Score = 662 bits (1708), Expect = 0.0 Identities = 330/666 (49%), Positives = 461/666 (69%), Gaps = 6/666 (0%) Frame = +3 Query: 75 MDSKESVNVRVYEDLVSPHVDSFNYFLERGLDSAVLNLRSVEIRQS--GNKLRMWLERPC 248 M K+S + +LV H++SF+Y L+ GL ++++V + S +L++ + P Sbjct: 1 MARKKSADFEPLRELVRHHIESFDYMLDEGLSEMFDHVKTVFVHDSFTNKRLKISVGNPE 60 Query: 249 IFSPDKENAEGRHEQRLMPYECRQAGISYKGRFYLDVCFQWNDG--VVIREQCQFGRIPI 422 IF P KE L+P+ECRQA ISY G+ DV FQ+ D V+RE+ FG+ P+ Sbjct: 61 IFPPQKEQGSKTLRDALLPFECRQAKISYTGKLMADVEFQYLDAGSPVVRERFNFGQFPV 120 Query: 423 MLRSSLCHLKDLGPHQLVGLREEPTEVGGYFICNGYERLIRLLIAPKRNHPLAVERNTYR 602 ML++ CHL+ +LV L+EE E+GGYFI NG ER+ R +I PK+N+P+++ R+++R Sbjct: 121 MLKTRRCHLQGADSQKLVSLKEEAAEMGGYFILNGLERVFRSVILPKQNYPMSMVRSSFR 180 Query: 603 NRGRDYTDKAVVVRCTRTDQSSVTARLYYLQHGSASIGFSLRRREYLIPVGVILKALIDV 782 +R YTDKAVV+RC R DQSSVT +LYYL +GS +GF L+ +EYL+PVG++LKAL+D Sbjct: 181 DRREGYTDKAVVIRCVRKDQSSVTLKLYYLLNGSVRLGFWLQGKEYLLPVGIVLKALVDT 240 Query: 783 TDAEIFQQLASVCNSLSQGQKGVVGTEFVTQRAIIILDEVKQYNIYTQREALKFIGERFK 962 D EIF L + + +KG VG+ V++R IIL EV+ ++ T+ + L+ IGE F+ Sbjct: 241 NDLEIFNHLTCCYDEKYKKEKGAVGSPLVSERVKIILAEVQDLSLTTRLQCLQHIGEHFQ 300 Query: 963 TVLEGMERKSDIAVGEALIKEYILVHLDSFCDKFNFLIFMLQKLFALVDGTAAPDNPDTL 1142 V++G++ +S AV E +I++YI VHL+ DKFN LIFMLQKLF+LVD T+ DNPD+L Sbjct: 301 PVIDGLQSESYYAVAETVIRDYIFVHLNDNNDKFNLLIFMLQKLFSLVDHTSVSDNPDSL 360 Query: 1143 QNQEALLPGHLLTISIKEKLQEWLFKVKSVLDKEINDDKQKFDLQDMARVKKAMEKIYTD 1322 QNQE LLPGHL+TI +KEKL++WL K K ++ EI ++ +KFD ++A +KK MEK + Sbjct: 361 QNQEILLPGHLITIYLKEKLEDWLRKGKKLIQDEIENNGKKFDFFNLANIKKVMEKNPSK 420 Query: 1323 GVGRSVENMINTGNLTXXXXXXXXXXXXMTVVAERLNFFRFLSHFRSIHRGSYFTQMRTT 1502 +G S+E M+ TG L TV AERLNF RF+S FR++HRG+ F +RTT Sbjct: 421 QIGTSIETMLKTGRLATQTGLDLQQRAGYTVQAERLNFLRFISFFRAVHRGASFAGLRTT 480 Query: 1503 TVRKLLPESWGFLCPVHTPDGTPCGLLNHLTVNCKITTDMDAEGHVKDPVKIRKALTTVL 1682 +VRKLLPESWGFLCPVHTPDG PCGLLNH+T C++ + D+ G+++D K+R ++ VL Sbjct: 481 SVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVASYYDSRGNIRDFSKMRTSILRVL 540 Query: 1683 IDLGMIPSLPRVSQVGPPEYLAILLDGRVMGFLSSSKITLAVEQIRSYKLKKGSGIPEDL 1862 I +GMIPSLP++ + GPP L++LLDGRV+G + SS+I V +R K+ S IP+DL Sbjct: 541 IGVGMIPSLPKLVKSGPPAVLSVLLDGRVVGVIPSSEIEKVVAHLRRLKVSAASVIPDDL 600 Query: 1863 EVGYIPCSFSGAYPGLFLFSSPSRFVRPVK--SIIDTENPCTELIGPFEQAFMEIKCIDG 2036 EVGY+P S GAYPGL+LF+SP +FVRPV+ S+ E+ ELIGPFEQ FMEI+C DG Sbjct: 601 EVGYVPLSLGGAYPGLYLFTSPPKFVRPVRNISLPSEESQNIELIGPFEQVFMEIRCPDG 660 Query: 2037 GNGGRK 2054 G+GGR+ Sbjct: 661 GDGGRR 666