BLASTX nr result

ID: Ephedra27_contig00012434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00012434
         (2113 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                             107   2e-20

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score =  107 bits (268), Expect = 2e-20
 Identities = 81/258 (31%), Positives = 134/258 (51%), Gaps = 7/258 (2%)
 Frame = -2

Query: 1845 VDKLVEEITNKLNEI-----KGLRPKASSRDDVEVSPFSLEFWKIRTGGWDDMNEILNEG 1681
            +D+L++ I+  L  I     K   PKA  R      P S  F K++        E L+E 
Sbjct: 91   LDELIKHISELLEHIQEAGKKSALPKAVQR----YLPASESFSKLK--------EFLSEA 138

Query: 1680 ESCVDSLAKYIPKHGGDKDMTHTIVP-ILEGIGSYHWITSALFLVGKTLERWEQVTENKE 1504
             + V  +   IP   GD     TIV  +L+G+G+ H  T+ L +V   LER+E V++N++
Sbjct: 139  TNFVKDI---IP---GD---AKTIVRGLLQGMGTAHLATTGLLVVANILERFEDVSDNQD 189

Query: 1503 ECFRLLEQMVGLAILLKQIRDRKMENPNMDTVIKGATEKILHGYLVCCSKMQTSRLRRML 1324
            ECF +L++M+ LA ++KQI++R      M   +K ATE I+ G + CCS+M +S+     
Sbjct: 190  ECFHVLKEMIFLAKVVKQIKERPQLQQRMHDEVKDATELIVEGSIKCCSQMASSQFSNFF 249

Query: 1323 VATYDKVNLSELRHDIKTIYREIASHMQISIYDAVKGKEIDPKNAIPENTAVVVFDENVQ 1144
              + +K  L E+   +   Y+ I   M I IYD  + K+ +     PE+   V  +E+ +
Sbjct: 250  STSVNKEELGEVAQQLDVKYKHIYIQMGIEIYDVGQCKKANLSRRYPEH--AVGLEESSR 307

Query: 1143 KIIEMFK-VSDDNATEVV 1093
            ++I++ +  S  NA  V+
Sbjct: 308  EVIDLLEWGSQQNAVAVI 325


Top