BLASTX nr result
ID: Ephedra27_contig00012393
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00012393
(4482 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group... 164 e-103
gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsi... 213 7e-94
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 159 2e-72
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 159 2e-72
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 163 5e-72
gb|ABA93730.1| retrotransposon protein, putative, unclassified [... 86 5e-72
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 162 8e-72
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 130 6e-71
gb|AFB73911.1| polyprotein [Citrus sinensis] 149 5e-68
gb|AFN88207.1| integrase core domain containing protein [Phaseol... 128 7e-68
emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera] 85 3e-67
gb|AAO73523.1| gag-pol polyprotein [Glycine max] 135 3e-65
gb|AAO73527.1| gag-pol polyprotein [Glycine max] 135 4e-65
gb|AAO73521.1| gag-pol polyprotein [Glycine max] 134 4e-65
gb|AAO73529.1| gag-pol polyprotein [Glycine max] 133 7e-65
emb|CAN60930.1| hypothetical protein VITISV_012765 [Vitis vinifera] 112 2e-64
emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera] 144 2e-64
emb|CAN62192.1| hypothetical protein VITISV_023983 [Vitis vinifera] 86 2e-64
gb|AGW47867.1| polyprotein [Phaseolus vulgaris] 164 8e-64
gb|AAC64917.1| gag-pol polyprotein [Glycine max] 127 1e-63
>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711922|gb|ABF99717.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1335
Score = 164 bits (416), Expect(6) = e-103
Identities = 140/503 (27%), Positives = 226/503 (44%), Gaps = 23/503 (4%)
Frame = +3
Query: 1212 ALLTEAKVTSNIIVEVCLTSEEENS--WCLDSSCSSHMTSNEKLLYNIRRTKNGSIIKTA 1385
A ++ K S +V C T++EE W +DS C++HM ++ L + + + I
Sbjct: 299 ANFSQEKEKSEEMVFSCHTAQEEKDDVWVIDSGCTNHMAADPNLFREMDSSYHAKI-HMG 357
Query: 1386 RQDELQVVGYGDXXXXXXXXXXXXNDVLLVKNLRRNLISFNKLLVKGVTI---------- 1535
Q G G DVLLV +L++NL+S +LL G +
Sbjct: 358 NGSIAQSEGKGTVAVQTADGPKFIKDVLLVPDLKQNLLSIGQLLEHGYAVYFEDFSCKIL 417
Query: 1536 -QENTNLYTDNNLRPYYKGNYIATADCSTGIYIIKTYKNAEANISQIT*SYGDLHKKLGH 1712
++N L N+ N++ + +T + + +E +IS + HK++GH
Sbjct: 418 DRKNNRLVAKINMEK--NRNFLLRMNHTTQMAL-----RSEVDISDLW------HKRMGH 464
Query: 1713 INDQYLKILCKNTFQTQTNWI--KCTKIMNLV*LEK*QSNLSQFSKIKTIRLLELIHSDI 1886
+N + LK+L +I K V ++ +++ + LEL+H+DI
Sbjct: 465 LNYRALKLLRTKGMVQGLPFITLKSDPCEGCVFGKQIRASFPHSGAWRASAPLELVHADI 524
Query: 1887 CGPLPVPSNQGFLYFATFIDDHSRYRYVYLLKKRDEIFLKFKSFRKLVQNKKNLKIAKLR 2066
G +P S G YF TFIDD++R +VY LK++ FK F+ +V+N+ N KI LR
Sbjct: 525 VGKVPTISEGGNWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKAMVENQSNRKIKVLR 584
Query: 2067 NDGGLEYNSKEFNDY*FSKGIIRETTLPYNLQQNEFAERRNRTL--MECTR*E*CQFT*K 2240
+D G EY SKEF Y + GI R+ T Y+ QQN AER+NRT+ M + +
Sbjct: 585 SDQGREYISKEFEKYCENAGIRRQLTAGYSAQQNGVAERKNRTINDMANSMLQDKGMPKS 644
Query: 2241 LVGRCPSNCKLCHHHWSNQSIGMKIPRLLWKSEPINWGHFKIFEEEYF*LVSKEHRKKLD 2420
+ + +++ + P W + GH ++F + V + R K D
Sbjct: 645 FWAEAVNTAVYILNRSPTKAVTNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRVKFD 704
Query: 2421 SKVKNEIFIGIPLGTKGYKLIDKDSRKIIVSRDLKLKKNKVTIEEVIDNAEINPLIIT-- 2594
+K IF+G G KGY+L + + +KII+SRD + T A PL+ T
Sbjct: 705 NKSDRCIFVGYADGIKGYRLYNLEKKKIIISRD-AIFDESATWNWKSPEASSTPLLPTTT 763
Query: 2595 ----NDRSKNPTTVNDNSPSAKP 2651
V D++PS +P
Sbjct: 764 ITLGQPHMHGTHEVEDHTPSPQP 786
Score = 84.0 bits (206), Expect(6) = e-103
Identities = 52/157 (33%), Positives = 85/157 (54%)
Frame = +1
Query: 2677 PMSSTL*NPISNKYKEINNIP*KSHPRWYRDMMEEANNFIIRKNHEANITIEVFLKVPKN 2856
PMSS+ + S+ E +S PR R M+E + ++ E + + P++
Sbjct: 789 PMSSSSASSDSSPSSEEQISTPESAPRRVRSMVELLESTSQQRGSEQHEFCNYSVVEPQS 848
Query: 2857 SEVSLTKNHAKLAMQKELDMIGKMGAWRLKALPPDKKEIGSR*IYSVKLKSIESLDKYKV 3036
+ + ++ AM+ E+ MI K W L P D++ IG + +Y KL S+ KYK
Sbjct: 849 FQEAEKHDNWIKAMEDEIHMIEKNNTWELVDRPRDREVIGVKWVYKTKLNPDGSVQKYKA 908
Query: 3037 RLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIATK 3147
RLVA+G+ Q GIDY +T+AP A++ TIR +I++A +
Sbjct: 909 RLVAKGFKQKPGIDYYETYAPVARLETIRTIIALAAQ 945
Score = 80.5 bits (197), Expect(6) = e-103
Identities = 44/117 (37%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
Frame = +3
Query: 3144 KNNWEIHHLDVKTIFLNGDIE*EIYMKIPKGYPTN--ENLSCRFLKSIYDLKQAPRAWYT 3317
+ W+I+ LDVK+ FLNG ++ EIY++ P+G+ EN R K++Y LKQAPRAWY+
Sbjct: 945 QKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQAPRAWYS 1004
Query: 3318 KLEDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI-TEPLKKDIEDAN*DL 3485
+++ + + KGF K ++ L+ G + +I++ +VD LI T +K ++D D+
Sbjct: 1005 QIDKYFIQKGFAKSISEPTLYVN-KTGTDILIVSLYVDDLIYTGNSEKMMQDFKKDM 1060
Score = 70.1 bits (170), Expect(6) = e-103
Identities = 36/106 (33%), Positives = 60/106 (56%)
Frame = +3
Query: 3999 GSSEVNY*RRIQGIWRSYNKLMWLVRLHNEFGVKLQLPININCDN*SAIKLLKNPIFHER 4178
GS+E Y + + ++++WL R+ + G K P I CD+ SAI + +NP+ H+R
Sbjct: 1224 GSAEAEYVAASKAV----SQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIAISENPVSHDR 1279
Query: 4179 TKHIDTQEHFVREKCKEKLIDITYINTNKQLAGGLTKNLIGDNFTR 4316
TKHI + H++RE + + + + T++QLA TK L + F R
Sbjct: 1280 TKHIAIKYHYIREAVDRQEVKLEFCRTDEQLADIFTKALSKEKFVR 1325
Score = 47.8 bits (112), Expect(6) = e-103
Identities = 23/89 (25%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Frame = +2
Query: 3473 KLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDN 3652
K + +++E++DLG + ++G+++H+ G ++Q YA+ ++ ++K+ N K + P+
Sbjct: 1057 KKDMMHTYEMSDLGLLHYFLGMEVHQSDEGIFISQRKYAENILKKFKMDNCKSVTTPLLP 1116
Query: 3653 GGKFESDQFVDK---**YQAIIRNLIYLT 3730
K ++ DK Y++++ +L+YLT
Sbjct: 1117 NEKQKARDGADKADPTIYRSLVGSLLYLT 1145
Score = 42.4 bits (98), Expect(6) = e-103
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 3733 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXXIEAYYDANF 3912
TRP+I + + L+R+ +P L++ AA + +YIKGT + Y D+++
Sbjct: 1147 TRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTADYGIWYKPVKESKLIGYTDSDW 1206
Query: 3913 DKSRDG-KSTIGYPVKIG 3963
D KST GY +G
Sbjct: 1207 AGCLDDMKSTSGYAFSLG 1224
>gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1347
Score = 213 bits (542), Expect(4) = 7e-94
Identities = 203/767 (26%), Positives = 333/767 (43%), Gaps = 42/767 (5%)
Frame = +3
Query: 1266 TSEEENSWCLDSSCSSHMTSNEKLLYNIR-------RTKNGSIIKTARQDELQVVGYGDX 1424
T+ E+ W +DS C++HMT E+ NI R +NG I+ TA G GD
Sbjct: 319 TTLREDVWLVDSGCTNHMTKEERYFSNINKSIKVPIRVRNGDIVMTA--------GKGDI 370
Query: 1425 XXXXXXXXXXXNDVLLVKNLRRNLISFNKLLVKG--VTIQENTNLYTDNNLRPYYKGNYI 1598
+V LV L +NL+S +++ G V Q+ + D N G I
Sbjct: 371 TVMTRHGKRIIKNVFLVPGLEKNLLSVPQIISSGYWVRFQDKRCIIQDAN------GKEI 424
Query: 1599 ATADCSTGIYIIKTYKNAEANISQIT*SYGDLHKKLGHINDQYLKILCKNTFQTQTNWIK 1778
+ + + IK E ++ + HK+LGH++++ L+ + K
Sbjct: 425 MNIEMTDKSFKIKLSSVEEEAMTANVQTEETWHKRLGHVSNKRLQQMQDKELVNGLPRFK 484
Query: 1779 CTK----IMNLV*LEK*QSNLSQFSKIKTIRLLELIHSDICGPLPVPSNQGFLYFATFID 1946
TK NL ++ + + + S+ KT LE++H+D+CGP+ S G Y+ F+D
Sbjct: 485 VTKETCKACNLG--KQSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDGSRYYVLFLD 542
Query: 1947 DHSRYRYVYLLKKRDEIFLKFKSFRKLVQNKKNLKIAKLRNDGGLEYNSKEFNDY*FSKG 2126
D++ +VY LK++ E F FK F+ LV+ + N I LR + +G
Sbjct: 543 DYTHMCWVYFLKQKSETFATFKKFKALVEKQSNCSIKTLR----------PMEVFCEDEG 592
Query: 2127 IIRETTLPYNLQQNEFAERRNRTLMECTR*E*CQ--FT*KLVGRCPSNCKLCHHHWSNQS 2300
I R+ TLPY+ QQN AER+NR+L+E R + KL + +++
Sbjct: 593 INRQVTLPYSPQQNGAAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAYLQNRLPSKA 652
Query: 2301 IGMKI-PRLLWKSEPINWGHFKIFEEEYF*LVSKEHRKKLDSKVKNEIFIGIPLGTKGYK 2477
I + P W N H +IF + + + R+KLD+K K I IG TKGY+
Sbjct: 653 IEDDVTPMEKWCGHKPNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYSNQTKGYR 712
Query: 2478 LIDKDSRKIIVSRDLKLKKNKV----TIEEVIDNAEINPLIITNDRSKNPTTVNDNSPSA 2645
+ + K+ VSRD+ +++K EEV ++ I R + T+ +D S
Sbjct: 713 VFLLEDEKVEVSRDVVFQEDKKWDWDKQEEVKKTFVMSINDIQESRDQQETSSHDLSQID 772
Query: 2646 KPLDTSK*R-STYVLYPLESYF**IQRDKQYSLKITSQMVQRYDGGSKQFHHTEES*SKH 2822
+ + S++VL + Q +++ TS+ ++Y K E +
Sbjct: 773 DHANNGEGETSSHVLSQVND-----QEERE-----TSESPKKY----KSMKEILEKAPRM 818
Query: 2823 NNRSFPKST*EQ*SFLNKKPCKVSNAERIRYDRKNG------SMETESLTTR*ERDWK*M 2984
N + + C V+N E YD G +M E R WK +
Sbjct: 819 ENDEAAQGI---------EACLVANEEPQTYDEARGDKEWEEAMNEEIKVIEKNRTWKLV 869
Query: 2985 NLFSKIKVN*ISR*I*SQTCCPRIHTA*RN*LHRH-------------FCSYS*NDDNKA 3125
+ K V + +T H + L F S D +A
Sbjct: 870 DKPEKKNVISVKWIYKIKTDASGNHVKHKARLVARGFSQEYGIDYLETFAPVSRYDTIRA 929
Query: 3126 TNLNCYKNNWEIHHLDVKTIFLNGDIE*EIYMKIPKGY--PTNENLSCRFLKSIYDLKQA 3299
+ W ++ +DVK+ FLNG++E E+Y+ P G+ E R K++Y LKQA
Sbjct: 930 LLAYAAQMKWRLYQMDVKSAFLNGELEEEVYVTQPPGFVIEGKEEKVLRLYKALYGLKQA 989
Query: 3300 PRAWYTKLEDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 3440
PRAWY +++ + + GF + D L++K +GE+ +I++ +VD LI
Sbjct: 990 PRAWYERIDSYFIQNGFARSMNDAALYSK-KKGEDVLIVSLYVDDLI 1035
Score = 74.7 bits (182), Expect(4) = 7e-94
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +3
Query: 4053 NKLMWLVRLHNEFGVKLQLPININCDN*SAIKLLKNPIFHERTKHIDTQEHFVREKCKEK 4232
N+ +WL RL +FG+K + I I CDN SAI + +NP+ H RTKHI+ + HFVRE +
Sbjct: 1248 NQAIWLQRLFEDFGLKFKEGIPILCDNKSAIAIGRNPVQHRRTKHIEIKYHFVREAEHKG 1307
Query: 4233 LIDITYINTNKQLAGGLTKNLIGDNF 4310
LI + Y QLA LTK L F
Sbjct: 1308 LIQLEYCKGEDQLADVLTKALSVSRF 1333
Score = 69.7 bits (169), Expect(4) = 7e-94
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Frame = +1
Query: 3733 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXXIEAYYDANF 3912
+RP++ Y +YL+R+ +P I HY+ A + +Y+KGT + Y D+++
Sbjct: 1140 SRPDVMYASSYLSRYMSSPSIQHYQEAKRVLRYVKGTSNFGVLFTSKETPRLVGYSDSDW 1199
Query: 3913 DKS-RDGKSTIGYPVKIGGNLISWTSQKQKVVARSTTEEEYRA 4038
S D KST GY +G + W S KQ+ VA+ST E EY A
Sbjct: 1200 GGSLEDKKSTTGYVFTLGLAMFCWQSCKQQTVAQSTAEAEYIA 1242
Score = 60.1 bits (144), Expect(4) = 7e-94
Identities = 36/99 (36%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Frame = +2
Query: 3473 KLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDN 3652
K +K+ FE+TDLG + ++G+++++ +G L+QE YA KLID++ +K +K + P+
Sbjct: 1048 KKNMKDEFEMTDLGLLNYFLGMEVNQDDSGIFLSQEKYANKLIDKFGMKESKSVSTPLTP 1107
Query: 3653 GGK---FESD--QFVDK**YQAIIRNLIYL--TIPDRTY 3748
GK E D +F D Y+ I+ L+YL + PD Y
Sbjct: 1108 QGKRKGVEGDDKEFADPTKYRRIVGGLLYLCASRPDVMY 1146
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 83.6 bits (205), Expect(5) = 2e-72
Identities = 43/101 (42%), Positives = 65/101 (64%), Gaps = 2/101 (1%)
Frame = +3
Query: 3144 KNNWEIHHLDVKTIFLNGDIE*EIYMKIPKGY--PTNENLSCRFLKSIYDLKQAPRAWYT 3317
+N W+IH +DVK+ FLNGD+E E+Y++ P+GY E+ R K +Y LKQAPRAW T
Sbjct: 937 QNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNT 996
Query: 3318 KLEDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 3440
+++ + K F+K + L+ KI + E+ +I +VD LI
Sbjct: 997 RIDKYFKEKDFIKCPYEHALYIKIQK-EDILIACLYVDDLI 1036
Score = 83.2 bits (204), Expect(5) = 2e-72
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 1/164 (0%)
Frame = +1
Query: 2659 PQNEDLPMSSTL*NPISNKYKEINNIP*KSHPRWYRDMMEEANNFIIRKNHEANITIEVF 2838
P E+ P P S +I + PR +R + E + + +N E +F
Sbjct: 778 PTREEPPSEEPTTPPTSPTSSQIEESSSERTPR-FRSIQEL---YEVTENQENLTLFCLF 833
Query: 2839 LKV-PKNSEVSLTKNHAKLAMQKELDMIGKMGAWRLKALPPDKKEIGSR*IYSVKLKSIE 3015
+ P + + ++ K + AM +E+ I K W L +LP K IG + +Y K S
Sbjct: 834 AECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKG 893
Query: 3016 SLDKYKVRLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIATK 3147
+++YK RLVA+GY+Q GIDY + FAP A++ T+RL+IS+A +
Sbjct: 894 EVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQ 937
Score = 75.1 bits (183), Expect(5) = 2e-72
Identities = 36/85 (42%), Positives = 53/85 (62%)
Frame = +3
Query: 4062 MWLVRLHNEFGVKLQLPININCDN*SAIKLLKNPIFHERTKHIDTQEHFVREKCKEKLID 4241
+WL L E + + P I DN SAI L KNP+FH+R+KHIDT+ H++RE +K +
Sbjct: 1250 IWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQ 1309
Query: 4242 ITYINTNKQLAGGLTKNLIGDNFTR 4316
+ Y+ T+ Q+A TK L +NF +
Sbjct: 1310 LEYVKTHDQVADFFTKPLKRENFIK 1334
Score = 68.9 bits (167), Expect(5) = 2e-72
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Frame = +1
Query: 3733 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXXIEAYYDANF 3912
TRP+I Y V ++R+ +P H+KAA I +YIKGT+ + Y D+++
Sbjct: 1139 TRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDW 1198
Query: 3913 DKS-RDGKSTIGYPVKIGGNLISWTSQKQKVVARSTTEEEYRA 4038
D KST G+ IG +W S+KQ +V ST E EY A
Sbjct: 1199 GGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVA 1241
Score = 55.5 bits (132), Expect(5) = 2e-72
Identities = 30/99 (30%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Frame = +2
Query: 3473 KLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDN 3652
K + FE+TD+G + Y+G+++ + NG + QE YAK+++ ++K+ ++ + PM+
Sbjct: 1049 KKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMEC 1108
Query: 3653 G---GKFESDQFVDK**YQAIIRNLIYLTI--PDRTYNI 3754
G K E + VD +++++ +L YLT PD Y +
Sbjct: 1109 GIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAV 1147
Score = 159 bits (403), Expect = 8e-36
Identities = 131/470 (27%), Positives = 215/470 (45%), Gaps = 17/470 (3%)
Frame = +3
Query: 1164 NRKLEAKI----ELIKHNEIALLTEAKVTSNIIVEVCLTSEEENSWCLDSSCSSHMTSNE 1331
N+K E K E I+ ++ L+ K +E + W LDS S+HM +
Sbjct: 299 NKKFEEKAHYVEEKIQEEDMLLMASYKKDEQ---------KENHKWYLDSGASNHMCGRK 349
Query: 1332 KLLYNIRRTKNGSIIKTARQDELQVVGYGDXXXXXXXXXXXX-NDVLLVKNLRRNLISFN 1508
+ + + G++ + +++V G G+ ++V + +++ N++S
Sbjct: 350 SMFAELDESVRGNVA-LGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLG 408
Query: 1509 KLLVKGVTIQENTNLYTDNNLRPY-YKGNYIATADCSTGIYIIKTYKNAEANISQIT*SY 1685
+LL KG I+ DNNL + N I S + +N A ++
Sbjct: 409 QLLEKGYDIR-----LKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKE 463
Query: 1686 GDL--HKKLGHINDQYLKILCKNTFQTQTNWIKCTKIMNLV*L-----EK*QSNLSQFSK 1844
H + GH+N L++L + + + C N V ++ + + + S
Sbjct: 464 ESWLWHLRFGHLNFGGLELLSR---KEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESS 520
Query: 1845 IKTIRLLELIHSDICGPLPVPSNQGFLYFATFIDDHSRYRYVYLLKKRDEIFLKFKSFRK 2024
+ + LELIH+D+CGP+ S YF FIDD SR +VY LK++ E+F FK F+
Sbjct: 521 SRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKA 580
Query: 2025 LVQNKKNLKIAKLRNDGGLEYNSKEFNDY*FSKGIIRETTLPYNLQQNEFAERRNRTLME 2204
V+ + L I +R+D G E+ SKEF Y GI R+ T+P + QQN ER+NRT++E
Sbjct: 581 HVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILE 640
Query: 2205 CTR*E*CQFT*KLVGRCPSNCKLCHHHWSN----QSIGMKIPRLLWKSEPINWGHFKIFE 2372
R + +L + C + N +S+ K P+ W H ++F
Sbjct: 641 MAR--SMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFG 698
Query: 2373 EEYF*LVSKEHRKKLDSKVKNEIFIGIPLGTKGYKLIDKDSRKIIVSRDL 2522
V E R KLD K + IFIG +KGYKL + D++K I+SR++
Sbjct: 699 SIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNI 748
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 83.6 bits (205), Expect(5) = 2e-72
Identities = 43/101 (42%), Positives = 65/101 (64%), Gaps = 2/101 (1%)
Frame = +3
Query: 3144 KNNWEIHHLDVKTIFLNGDIE*EIYMKIPKGY--PTNENLSCRFLKSIYDLKQAPRAWYT 3317
+N W+IH +DVK+ FLNGD+E E+Y++ P+GY E+ R K +Y LKQAPRAW T
Sbjct: 937 QNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNT 996
Query: 3318 KLEDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 3440
+++ + K F+K + L+ KI + E+ +I +VD LI
Sbjct: 997 RIDKYFKEKDFIKCPYEHALYIKIQK-EDILIACLYVDDLI 1036
Score = 83.2 bits (204), Expect(5) = 2e-72
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 1/164 (0%)
Frame = +1
Query: 2659 PQNEDLPMSSTL*NPISNKYKEINNIP*KSHPRWYRDMMEEANNFIIRKNHEANITIEVF 2838
P E+ P P S +I + PR +R + E + + +N E +F
Sbjct: 778 PTREEPPSEEPTTPPTSPTSSQIEESSSERTPR-FRSIQEL---YEVTENQENLTLFCLF 833
Query: 2839 LKV-PKNSEVSLTKNHAKLAMQKELDMIGKMGAWRLKALPPDKKEIGSR*IYSVKLKSIE 3015
+ P + + ++ K + AM +E+ I K W L +LP K IG + +Y K S
Sbjct: 834 AECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKG 893
Query: 3016 SLDKYKVRLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIATK 3147
+++YK RLVA+GY+Q GIDY + FAP A++ T+RL+IS+A +
Sbjct: 894 EVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQ 937
Score = 75.1 bits (183), Expect(5) = 2e-72
Identities = 36/85 (42%), Positives = 53/85 (62%)
Frame = +3
Query: 4062 MWLVRLHNEFGVKLQLPININCDN*SAIKLLKNPIFHERTKHIDTQEHFVREKCKEKLID 4241
+WL L E + + P I DN SAI L KNP+FH+R+KHIDT+ H++RE +K +
Sbjct: 1250 IWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQ 1309
Query: 4242 ITYINTNKQLAGGLTKNLIGDNFTR 4316
+ Y+ T+ Q+A TK L +NF +
Sbjct: 1310 LEYVKTHDQVADFFTKPLKRENFIK 1334
Score = 68.9 bits (167), Expect(5) = 2e-72
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Frame = +1
Query: 3733 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXXIEAYYDANF 3912
TRP+I Y V ++R+ +P H+KAA I +YIKGT+ + Y D+++
Sbjct: 1139 TRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDW 1198
Query: 3913 DKS-RDGKSTIGYPVKIGGNLISWTSQKQKVVARSTTEEEYRA 4038
D KST G+ IG +W S+KQ +V ST E EY A
Sbjct: 1199 GGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVA 1241
Score = 55.5 bits (132), Expect(5) = 2e-72
Identities = 30/99 (30%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Frame = +2
Query: 3473 KLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDN 3652
K + FE+TD+G + Y+G+++ + NG + QE YAK+++ ++K+ ++ + PM+
Sbjct: 1049 KKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMEC 1108
Query: 3653 G---GKFESDQFVDK**YQAIIRNLIYLTI--PDRTYNI 3754
G K E + VD +++++ +L YLT PD Y +
Sbjct: 1109 GIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAV 1147
Score = 159 bits (403), Expect = 8e-36
Identities = 131/470 (27%), Positives = 215/470 (45%), Gaps = 17/470 (3%)
Frame = +3
Query: 1164 NRKLEAKI----ELIKHNEIALLTEAKVTSNIIVEVCLTSEEENSWCLDSSCSSHMTSNE 1331
N+K E K E I+ ++ L+ K +E + W LDS S+HM +
Sbjct: 299 NKKFEEKANYVEEKIQEEDMLLMASYKKDEQ---------KENHKWYLDSGASNHMCGRK 349
Query: 1332 KLLYNIRRTKNGSIIKTARQDELQVVGYGDXXXXXXXXXXXX-NDVLLVKNLRRNLISFN 1508
+ + + G++ + +++V G G+ ++V + +++ N++S
Sbjct: 350 SMFAELDESVRGNVA-LGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLG 408
Query: 1509 KLLVKGVTIQENTNLYTDNNLRPY-YKGNYIATADCSTGIYIIKTYKNAEANISQIT*SY 1685
+LL KG I+ DNNL + N I S + +N A ++
Sbjct: 409 QLLEKGYDIR-----LKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKE 463
Query: 1686 GDL--HKKLGHINDQYLKILCKNTFQTQTNWIKCTKIMNLV*L-----EK*QSNLSQFSK 1844
H + GH+N L++L + + + C N V ++ + + + S
Sbjct: 464 ESWLWHLRFGHLNFGGLELLSR---KEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESS 520
Query: 1845 IKTIRLLELIHSDICGPLPVPSNQGFLYFATFIDDHSRYRYVYLLKKRDEIFLKFKSFRK 2024
+ + LELIH+D+CGP+ S YF FIDD SR +VY LK++ E+F FK F+
Sbjct: 521 SRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKA 580
Query: 2025 LVQNKKNLKIAKLRNDGGLEYNSKEFNDY*FSKGIIRETTLPYNLQQNEFAERRNRTLME 2204
V+ + L I +R+D G E+ SKEF Y GI R+ T+P + QQN ER+NRT++E
Sbjct: 581 HVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILE 640
Query: 2205 CTR*E*CQFT*KLVGRCPSNCKLCHHHWSN----QSIGMKIPRLLWKSEPINWGHFKIFE 2372
R + +L + C + N +S+ K P+ W H ++F
Sbjct: 641 MAR--SMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFG 698
Query: 2373 EEYF*LVSKEHRKKLDSKVKNEIFIGIPLGTKGYKLIDKDSRKIIVSRDL 2522
V E R KLD K + IFIG +KGYKL + D++K I+SR++
Sbjct: 699 SIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNI 748
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 84.7 bits (208), Expect(5) = 5e-72
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Frame = +3
Query: 3144 KNNWEIHHLDVKTIFLNGDIE*EIYMKIPKGY--PTNENLSCRFLKSIYDLKQAPRAWYT 3317
+N W+IH +DVK+ FLNGD+E E+Y++ P+GY E+ R K++Y LKQAPRAW T
Sbjct: 937 QNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNT 996
Query: 3318 KLEDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 3440
+++ + K F+K + L+ KI + E+ +I +VD LI
Sbjct: 997 RIDKYFKEKDFIKCPYEHALYIKIQK-EDILIACLYVDDLI 1036
Score = 82.8 bits (203), Expect(5) = 5e-72
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 1/164 (0%)
Frame = +1
Query: 2659 PQNEDLPMSSTL*NPISNKYKEINNIP*KSHPRWYRDMMEEANNFIIRKNHEANITIEVF 2838
P E+ P P S +I + PR +R + E + + +N E +F
Sbjct: 778 PTREEPPSEEPTTPPTSPTSSQIEESSSERTPR-FRSIQEL---YEVTENQENLTLFCLF 833
Query: 2839 LKV-PKNSEVSLTKNHAKLAMQKELDMIGKMGAWRLKALPPDKKEIGSR*IYSVKLKSIE 3015
+ P + + ++ K + AM +E+ I K W L +LP K IG + +Y K S
Sbjct: 834 AECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKG 893
Query: 3016 SLDKYKVRLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIATK 3147
+++YK RLVA+GY Q GIDY + FAP A++ T+RL+IS+A +
Sbjct: 894 EVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQ 937
Score = 72.8 bits (177), Expect(5) = 5e-72
Identities = 35/85 (41%), Positives = 53/85 (62%)
Frame = +3
Query: 4062 MWLVRLHNEFGVKLQLPININCDN*SAIKLLKNPIFHERTKHIDTQEHFVREKCKEKLID 4241
+WL L E + + P I DN SAI L KNP+FH+R+KHIDT+ H++RE +K +
Sbjct: 1250 IWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQ 1309
Query: 4242 ITYINTNKQLAGGLTKNLIGDNFTR 4316
+ Y+ T+ Q+A TK L ++F +
Sbjct: 1310 LEYVKTHDQVADIFTKPLKREDFIK 1334
Score = 68.9 bits (167), Expect(5) = 5e-72
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Frame = +1
Query: 3733 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXXIEAYYDANF 3912
TRP+I Y V ++R+ +P H+KAA I +YIKGT+ + Y D+++
Sbjct: 1139 TRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDW 1198
Query: 3913 DKS-RDGKSTIGYPVKIGGNLISWTSQKQKVVARSTTEEEYRA 4038
D KST G+ IG +W S+KQ +V ST E EY A
Sbjct: 1199 GGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVA 1241
Score = 55.5 bits (132), Expect(5) = 5e-72
Identities = 30/99 (30%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Frame = +2
Query: 3473 KLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDN 3652
K + FE+TD+G + Y+G+++ + NG + QE YAK+++ ++K+ ++ + PM+
Sbjct: 1049 KKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMEC 1108
Query: 3653 G---GKFESDQFVDK**YQAIIRNLIYLTI--PDRTYNI 3754
G K E + VD +++++ +L YLT PD Y +
Sbjct: 1109 GIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAV 1147
Score = 163 bits (413), Expect = 6e-37
Identities = 133/470 (28%), Positives = 216/470 (45%), Gaps = 17/470 (3%)
Frame = +3
Query: 1164 NRKLEAKI----ELIKHNEIALLTEAKVTSNIIVEVCLTSEEENSWCLDSSCSSHMTSNE 1331
N+K E K E I+ ++ L+ K EE + W LDS S+HM +
Sbjct: 299 NKKFEEKANYVEEKIQEEDMLLMASYKKDEQ---------EENHKWYLDSGASNHMCGRK 349
Query: 1332 KLLYNIRRTKNGSIIKTARQDELQVVGYGDXXXXXXXXXXXX-NDVLLVKNLRRNLISFN 1508
+ + + G++ + +++V G G+ ++V + +++ N++S
Sbjct: 350 SMFAELDESVRGNVA-LGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLG 408
Query: 1509 KLLVKGVTIQENTNLYTDNNLRPY-YKGNYIATADCSTGIYIIKTYKNAEANISQIT*SY 1685
+LL KG I+ DNNL + N I S + +N A ++
Sbjct: 409 QLLEKGYDIR-----LKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKE 463
Query: 1686 GDL--HKKLGHINDQYLKILCKNTFQTQTNWIKCTKIMNLV*L-----EK*QSNLSQFSK 1844
H + GH+N L++L + + + C N V ++ + + + S
Sbjct: 464 ESWLWHLRFGHLNFGGLELLSR---KEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESS 520
Query: 1845 IKTIRLLELIHSDICGPLPVPSNQGFLYFATFIDDHSRYRYVYLLKKRDEIFLKFKSFRK 2024
+ + LELIH+D+CGP+ S YF FIDD SR +VY LK++ E+F FK F+
Sbjct: 521 SRAQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKA 580
Query: 2025 LVQNKKNLKIAKLRNDGGLEYNSKEFNDY*FSKGIIRETTLPYNLQQNEFAERRNRTLME 2204
V+ + L I +R+D G E+ SKEF Y GI R+ T+P + QQN AER+NRT++E
Sbjct: 581 HVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILE 640
Query: 2205 CTR*E*CQFT*KLVGRCPSNCKLCHHHWSN----QSIGMKIPRLLWKSEPINWGHFKIFE 2372
R + +L + C + N +S+ K P+ W H ++F
Sbjct: 641 MAR--SMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFG 698
Query: 2373 EEYF*LVSKEHRKKLDSKVKNEIFIGIPLGTKGYKLIDKDSRKIIVSRDL 2522
V E R KLD K + IFIG +KGYKL + D++K I+SR++
Sbjct: 699 SIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNI 748
>gb|ABA93730.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 656
Score = 86.3 bits (212), Expect(5) = 5e-72
Identities = 46/104 (44%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Frame = +1
Query: 3730 NTRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXXIEAYYDAN 3909
+TRP+I Y V+ ++R+ H+P H I +Y+KGT +E Y DA+
Sbjct: 446 HTRPDISYVVSVVSRYMHDPRTGHLDVVHKILRYLKGTPGKGLWFRKNGHLNVEGYCDAD 505
Query: 3910 FDKSRDGK-STIGYPVKIGGNLISWTSQKQKVVARSTTEEEYRA 4038
+ S D + ST GY V +GGNL+SW S+KQ VVARST E EYRA
Sbjct: 506 WASSMDDRRSTSGYCVFVGGNLVSWRSKKQAVVARSTAEAEYRA 549
Score = 85.1 bits (209), Expect(5) = 5e-72
Identities = 42/101 (41%), Positives = 65/101 (64%)
Frame = +1
Query: 2839 LKVPKNSEVSLTKNHAKLAMQKELDMIGKMGAWRLKALPPDKKEIGSR*IYSVKLKSIES 3018
+ +PK+ + + K AM++EL+ + K W L LPP+K+ +G + +++VK
Sbjct: 144 MPIPKDWKCAKQDPKWKDAMKEELNALVKNKTWELVKLPPEKRAVGCKWVFTVKQTPEGK 203
Query: 3019 LDKYKVRLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIA 3141
+D+YK RLVA+GY+Q GIDY +TFAP AKM +R L+S A
Sbjct: 204 VDRYKARLVAKGYSQTYGIDYDETFAPVAKMGIVRALVSCA 244
Score = 82.0 bits (201), Expect(5) = 5e-72
Identities = 41/106 (38%), Positives = 66/106 (62%), Gaps = 3/106 (2%)
Frame = +3
Query: 3132 LNCYKN-NWEIHHLDVKTIFLNGDIE*EIYMKIPKGYPTNENLS--CRFLKSIYDLKQAP 3302
++C N W +H LDVK FL+GD+ E+YM+IP G+ ++ + C+ KS+Y LKQ+P
Sbjct: 241 VSCAVNFGWPLHQLDVKNAFLHGDLHEEVYMEIPPGFGNSQTVGKVCKLKKSLYGLKQSP 300
Query: 3303 RAWYTKLEDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 3440
RAW+ + + + G+ + + D +F K RG N ILA +VD ++
Sbjct: 301 RAWFDRFRHAVCDMGYSQCNGDHTVFYK-HRGTNITILAVYVDDIV 345
Score = 64.7 bits (156), Expect(5) = 5e-72
Identities = 30/83 (36%), Positives = 50/83 (60%)
Frame = +3
Query: 4047 SYNKLMWLVRLHNEFGVKLQLPININCDN*SAIKLLKNPIFHERTKHIDTQEHFVREKCK 4226
S ++++W+ L E V + ++CDN SAI + NP+ H+RTKH++ F++EK
Sbjct: 553 SLSEMLWMRSLLTELRVLRSDTVMLHCDNKSAISIANNPVQHDRTKHVEIDRFFIKEKID 612
Query: 4227 EKLIDITYINTNKQLAGGLTKNL 4295
++ + YI + +QLA LTK L
Sbjct: 613 SGVLRLEYIKSCEQLADCLTKGL 635
Score = 46.6 bits (109), Expect(5) = 5e-72
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Frame = +2
Query: 3467 RC-KLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYP 3643
RC K RL +FE+ DLG + ++G+++ + G +L+Q Y L+ + + + P
Sbjct: 355 RCLKERLGKAFEVKDLGPLRYFLGIEIARSSKGIVLSQRKYVLDLLTDTGMLGCRASTTP 414
Query: 3644 MDNGGKF--ESDQFVDK**YQAIIRNLIYL--TIPDRTY 3748
+D + +S V+K YQ ++ LIYL T PD +Y
Sbjct: 415 IDRNHQLCAQSGDPVNKEAYQRLVGRLIYLCHTRPDISY 453
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 84.7 bits (208), Expect(5) = 8e-72
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Frame = +3
Query: 3144 KNNWEIHHLDVKTIFLNGDIE*EIYMKIPKGY--PTNENLSCRFLKSIYDLKQAPRAWYT 3317
+N W+IH +DVK+ FLNGD+E E+Y++ P+GY E+ R K++Y LKQAPRAW T
Sbjct: 905 QNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNT 964
Query: 3318 KLEDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 3440
+++ + K F+K + L+ KI + E+ +I +VD LI
Sbjct: 965 RIDKYFKEKDFIKCPYEHALYIKIQK-EDILIACLYVDDLI 1004
Score = 82.0 bits (201), Expect(5) = 8e-72
Identities = 40/100 (40%), Positives = 62/100 (62%)
Frame = +1
Query: 2848 PKNSEVSLTKNHAKLAMQKELDMIGKMGAWRLKALPPDKKEIGSR*IYSVKLKSIESLDK 3027
P + + ++ K + AM +E+ I K W L +LP K IG + +Y K S +++
Sbjct: 806 PMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVER 865
Query: 3028 YKVRLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIATK 3147
YK RLVA+GY+Q GIDY + FAP A++ T+RL+IS+A +
Sbjct: 866 YKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQ 905
Score = 72.8 bits (177), Expect(5) = 8e-72
Identities = 35/85 (41%), Positives = 53/85 (62%)
Frame = +3
Query: 4062 MWLVRLHNEFGVKLQLPININCDN*SAIKLLKNPIFHERTKHIDTQEHFVREKCKEKLID 4241
+WL L E + + P I DN SAI L KNP+FH+R+KHIDT+ H++RE +K +
Sbjct: 1218 IWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQ 1277
Query: 4242 ITYINTNKQLAGGLTKNLIGDNFTR 4316
+ Y+ T+ Q+A TK L ++F +
Sbjct: 1278 LEYVKTHDQVADIFTKPLKREDFIK 1302
Score = 68.9 bits (167), Expect(5) = 8e-72
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Frame = +1
Query: 3733 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXXIEAYYDANF 3912
TRP+I Y V ++R+ +P H+KAA I +YIKGT+ + Y D+++
Sbjct: 1107 TRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDW 1166
Query: 3913 DKS-RDGKSTIGYPVKIGGNLISWTSQKQKVVARSTTEEEYRA 4038
D KST G+ IG +W S+KQ +V ST E EY A
Sbjct: 1167 GGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVA 1209
Score = 55.5 bits (132), Expect(5) = 8e-72
Identities = 30/99 (30%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Frame = +2
Query: 3473 KLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDN 3652
K + FE+TD+G + Y+G+++ + NG + QE YAK+++ ++K+ ++ + PM+
Sbjct: 1017 KKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMEC 1076
Query: 3653 G---GKFESDQFVDK**YQAIIRNLIYLTI--PDRTYNI 3754
G K E + VD +++++ +L YLT PD Y +
Sbjct: 1077 GIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAV 1115
Score = 162 bits (411), Expect = 1e-36
Identities = 133/470 (28%), Positives = 216/470 (45%), Gaps = 17/470 (3%)
Frame = +3
Query: 1164 NRKLEAKI----ELIKHNEIALLTEAKVTSNIIVEVCLTSEEENSWCLDSSCSSHMTSNE 1331
N+K E K E I+ ++ L+ K EE + W LDS S+HM +
Sbjct: 299 NKKFEEKANYVEEKIQEEDMLLMASYKKDEQ---------EENHKWYLDSGASNHMCGRK 349
Query: 1332 KLLYNIRRTKNGSIIKTARQDELQVVGYGDXXXXXXXXXXXX-NDVLLVKNLRRNLISFN 1508
+ + + G++ + +++V G G+ ++V + +++ N++S
Sbjct: 350 SMFAELDESVRGNVA-LGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLG 408
Query: 1509 KLLVKGVTIQENTNLYTDNNLRPY-YKGNYIATADCSTGIYIIKTYKNAEANISQIT*SY 1685
+LL KG I+ DNNL + N I S + +N A ++
Sbjct: 409 QLLEKGYDIR-----LKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKE 463
Query: 1686 GDL--HKKLGHINDQYLKILCKNTFQTQTNWIKCTKIMNLV*L-----EK*QSNLSQFSK 1844
H + GH+N L++L + + + C N V ++ + + + S
Sbjct: 464 ESWLWHLRFGHLNFGGLELLSR---KEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESS 520
Query: 1845 IKTIRLLELIHSDICGPLPVPSNQGFLYFATFIDDHSRYRYVYLLKKRDEIFLKFKSFRK 2024
+ + LELIH+D+CGP+ S YF FIDD SR +VY LK++ E+F FK F+
Sbjct: 521 SRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKA 580
Query: 2025 LVQNKKNLKIAKLRNDGGLEYNSKEFNDY*FSKGIIRETTLPYNLQQNEFAERRNRTLME 2204
V+ + L I +R+D G E+ SKEF Y GI R+ T+P + QQN AER+NRT++E
Sbjct: 581 HVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILE 640
Query: 2205 CTR*E*CQFT*KLVGRCPSNCKLCHHHWSN----QSIGMKIPRLLWKSEPINWGHFKIFE 2372
R + +L + C + N +S+ K P+ W H ++F
Sbjct: 641 MAR--SMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFG 698
Query: 2373 EEYF*LVSKEHRKKLDSKVKNEIFIGIPLGTKGYKLIDKDSRKIIVSRDL 2522
V E R KLD K + IFIG +KGYKL + D++K I+SR++
Sbjct: 699 SIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNI 748
>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 84.0 bits (206), Expect(5) = 6e-71
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 1/164 (0%)
Frame = +1
Query: 2659 PQNEDLPMSSTL*NPISNKYKEINNIP*KSHPRWYRDMMEEANNFIIRKNHEANITIEVF 2838
P E+ P P S +I + PR +R + E + + +N E +F
Sbjct: 717 PTREEPPSEEPTTRPTSLTSSQIEESSSERTPR-FRSIQEL---YEVTENQENLTLFCLF 772
Query: 2839 LKV-PKNSEVSLTKNHAKLAMQKELDMIGKMGAWRLKALPPDKKEIGSR*IYSVKLKSIE 3015
+ P + + ++ K + AM +E+ I K W L +LP K IG + +Y K S
Sbjct: 773 AECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKG 832
Query: 3016 SLDKYKVRLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIATK 3147
+++YK RLVA+GY+Q GIDY + FAP A++ T+RL+IS+A +
Sbjct: 833 EVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQ 876
Score = 81.3 bits (199), Expect(5) = 6e-71
Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
Frame = +3
Query: 3144 KNNWEIHHLDVKTIFLNGDIE*EIYMKIPKGY--PTNENLSCRFLKSIYDLKQAPRAWYT 3317
+N W+IH +D K FLNGD E E+Y++ P+GY E+ R K++Y LKQAPRAW T
Sbjct: 876 QNKWKIHQMDFKLAFLNGDFEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNT 935
Query: 3318 KLEDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 3440
+++ + K F+K + L+ KI + E+ +I +VD LI
Sbjct: 936 RIDKYFKEKDFIKCPYEHALYIKIQK-EDILIACLYVDDLI 975
Score = 72.8 bits (177), Expect(5) = 6e-71
Identities = 35/85 (41%), Positives = 53/85 (62%)
Frame = +3
Query: 4062 MWLVRLHNEFGVKLQLPININCDN*SAIKLLKNPIFHERTKHIDTQEHFVREKCKEKLID 4241
+WL L E + + P I DN SAI L KNP+FH+R+KHIDT+ H++RE +K +
Sbjct: 1189 IWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQ 1248
Query: 4242 ITYINTNKQLAGGLTKNLIGDNFTR 4316
+ Y+ T+ Q+A TK L ++F +
Sbjct: 1249 LEYVKTHDQVADIFTKPLKREDFIK 1273
Score = 70.5 bits (171), Expect(5) = 6e-71
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Frame = +1
Query: 3733 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXXIEAYYDANF 3912
TRP+I Y V ++R+ +P H+KAA I +YIKGT+ + Y D+++
Sbjct: 1078 TRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDW 1137
Query: 3913 DKS-RDGKSTIGYPVKIGGNLISWTSQKQKVVARSTTEEEYRA 4038
+ D KST G+ IG +W S+KQ +V ST E EY A
Sbjct: 1138 GRDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVA 1180
Score = 52.4 bits (124), Expect(5) = 6e-71
Identities = 29/99 (29%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Frame = +2
Query: 3473 KLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDN 3652
K + FE+TD+G + Y+G+++ + N + QE YAK+++ ++K+ ++ + PM+
Sbjct: 988 KKEMTKEFEMTDIGLMSYYLGIEVKQEDNRIFITQEGYAKEVLKKFKMDDSNPVCTPMEC 1047
Query: 3653 G---GKFESDQFVDK**YQAIIRNLIYLTI--PDRTYNI 3754
G K E + VD +++++ +L YLT PD Y +
Sbjct: 1048 GIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAV 1086
Score = 130 bits (328), Expect = 4e-27
Identities = 121/470 (25%), Positives = 203/470 (43%), Gaps = 17/470 (3%)
Frame = +3
Query: 1164 NRKLEAKI----ELIKHNEIALLTEAKVTSNIIVEVCLTSEEENSWCLDSSCSSHMTSNE 1331
N+K E K E I+ ++ L+ K EE + W LDS S+HM +
Sbjct: 261 NKKFEEKANYVEEKIQEEDMLLMASYKKDEQ---------EENHKWYLDSGASNHMCGRK 311
Query: 1332 KLLYNIRRTKNGSIIKTARQDELQVVGYGDXXXXXXXXXXXX-NDVLLVKNLRRNLISFN 1508
+ + + G++ + +++V G G+ ++V + +++ N++S
Sbjct: 312 SMFAELDESVRGNVA-LGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLG 370
Query: 1509 KLLVKGVTIQENTNLYTDNNLRPY-YKGNYIATADCSTGIYIIKTYKNAEANISQIT*SY 1685
+LL KG I+ DNNL + N I S + +N A ++
Sbjct: 371 QLLEKGYDIR-----LKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKE 425
Query: 1686 GDL--HKKLGHINDQYLKILCKNTFQTQTNWIKCTKIMNLV*L-----EK*QSNLSQFSK 1844
H + GH+N L++L + + + C N V ++ + + + S
Sbjct: 426 ESWLWHLRFGHLNFGGLELLSR---KEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESS 482
Query: 1845 IKTIRLLELIHSDICGPLPVPSNQGFLYFATFIDDHSRYRYVYLLKKRDEIFLKFKSFRK 2024
+ + LELIH+D+CGP+ S + + E+F FK F+
Sbjct: 483 SRAQKPLELIHTDVCGPIKPKSLE-----------------------KSEVFKIFKKFKA 519
Query: 2025 LVQNKKNLKIAKLRNDGGLEYNSKEFNDY*FSKGIIRETTLPYNLQQNEFAERRNRTLME 2204
V+ + L I +R+D G E+ SKEF Y GI R+ T+P + QQN AER+NRT++E
Sbjct: 520 HVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILE 579
Query: 2205 CTR*E*CQFT*KLVGRCPSNCKLCHHHWSN----QSIGMKIPRLLWKSEPINWGHFKIFE 2372
R + +L + C + N +S+ K P+ W H ++F
Sbjct: 580 MAR--SMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFG 637
Query: 2373 EEYF*LVSKEHRKKLDSKVKNEIFIGIPLGTKGYKLIDKDSRKIIVSRDL 2522
V E R KLD K + IFIG +KGYKL + D++K I+SR++
Sbjct: 638 SIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNI 687
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 149 bits (376), Expect(3) = 5e-68
Identities = 133/483 (27%), Positives = 220/483 (45%), Gaps = 28/483 (5%)
Frame = +3
Query: 1287 WCLDSSCSSHMTSNEKLLYNIRRTKNGSIIKTARQDELQVVGYGDXXXXXXXXXXXX-ND 1463
W +DS + HMTS + + GS+ L++ G G +
Sbjct: 292 WLIDSGATWHMTSRREWFHTYEPISGGSVYM-GNDHALEIAGIGTIKIKMFDGTIRTIGE 350
Query: 1464 VLLVKNLRRNLISFNKLLVKGVTIQENTNLYTDNNLRPYYKGNYIA--TADCSTGIYIIK 1637
V V L++NL+S ++ G + +N + KG + ++++K
Sbjct: 351 VRHVNGLKKNLLSLGQMDSHGY------KTHVENGIMKIVKGALVLMKVEKIGANLFMLK 404
Query: 1638 --TYKNAEANISQIT*SYGD-----LHKKLGHINDQYLKILCKNTFQTQTNWIKCTKIMN 1796
T + A+A ++ S G+ H KLGH+++Q LKIL + + +
Sbjct: 405 GETLQEADACVA----SNGEESTMMWHLKLGHMSEQGLKILSERKLLPGLKSVSLPFCEH 460
Query: 1797 LV*LEK*QSNLSQFSKIKTIRLLELIHSDICGPLPVPSNQGFLYFATFIDDHSRYRYVYL 1976
V ++ + S+ S ++ +L+LIHSD+ P S G Y TFIDD+SR +VY
Sbjct: 461 CVTSKQHRLKFSR-SIARSKCILDLIHSDVWES-PDISMGGAKYMVTFIDDYSRRCWVYP 518
Query: 1977 LKKRDEIFLKFKSFRKLVQNKKNLKIAKLRNDGGLEYNSKEFNDY*FSKGIIRETTLPYN 2156
+KK+ ++F FK ++ V+ + KI LR D G EY EF + +GI R+ T+ Y
Sbjct: 519 IKKKSDVFPVFKEYKAWVELESGKKIKCLRTDNGGEYTDGEFLAFCKQEGIQRQFTVAYT 578
Query: 2157 LQQNEFAERRNRTLMECTR-------------*E*CQFT*KLVGRCPSNCKLCHHHWSNQ 2297
QQN AER NRTL E R E + +V R PS
Sbjct: 579 PQQNGVAERMNRTLTERIRAMLRTAGLPNSFWAEAAKTACYIVNRSPST----------- 627
Query: 2298 SIGMKIPRLLWKSEPINWGHFKIFEEEYF*LVSKEHRKKLDSKVKNEIFIGIPLGTKGYK 2477
+IG+K +W +P ++ + F + + + + R KLD+K + IF+G G KGY+
Sbjct: 628 AIGLKTAMEMWTGKPADYSYLHAFGCPMYVMYNAQERTKLDAKSRRCIFLGYADGVKGYR 687
Query: 2478 LIDKDSRKIIVSRDLKLKKNKVTIEE-----VIDNAEINPLIITNDRSKNPTTVNDNSPS 2642
L D + KI++SRD+ ++++ ++ V + +E P+ + N NP N +S
Sbjct: 688 LWDPTAHKIVISRDVIFVEDQLQRKDGDDGTVKEKSETVPVYVEN----NPE--NSDSSE 741
Query: 2643 AKP 2651
A P
Sbjct: 742 AAP 744
Score = 85.5 bits (210), Expect(3) = 5e-68
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Frame = +3
Query: 3138 CYKNNWEIHHLDVKTIFLNGDIE*EIYMKIPKGYPTN--ENLSCRFLKSIYDLKQAPRAW 3311
C + + LDVKT FL+G++E EIYM P+G+ ENL CR KS+Y LKQAPR W
Sbjct: 892 CATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRYW 951
Query: 3312 YTKLEDFLVNKGFLKLDADLNLFTKILRGENKIILAFHV-DILITEPLKKDIEDAN*DLK 3488
Y + + F+++ G+ +L +D + K + IIL +V D+L+ P K I++
Sbjct: 952 YKRFDSFIMSLGYNRLSSDHCAYYKRFEDNDFIILLLYVDDMLVAGPNKDRIQE------ 1005
Query: 3489 TVLKLQILEKF 3521
LK Q+ +F
Sbjct: 1006 --LKAQLAREF 1014
Score = 75.1 bits (183), Expect(3) = 5e-68
Identities = 37/129 (28%), Positives = 72/129 (55%)
Frame = +1
Query: 2752 PRWYRDMMEEANNFIIRKNHEANITIEVFLKVPKNSEVSLTKNHAKLAMQKELDMIGKMG 2931
P W+ + + E N + + F + +S+V+L AMQ+E++ + K
Sbjct: 769 PTWHSEYVTEINVAYCLLTEDGEPS--TFHEALNSSDVALWMT----AMQEEIEALHKNK 822
Query: 2932 AWRLKALPPDKKEIGSR*IYSVKLKSIESLDKYKVRLVAQGYTQLEGIDYTDTFAPTAKM 3111
W L LP +K IG++ +Y +K + +++Y+ RLV +GY Q EGID+ + F+P ++
Sbjct: 823 TWELVPLPRGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRL 882
Query: 3112 MTIRLLISI 3138
T+R+++++
Sbjct: 883 TTVRIVLAM 891
Score = 71.2 bits (173), Expect(2) = 2e-21
Identities = 38/85 (44%), Positives = 52/85 (61%)
Frame = +3
Query: 4056 KLMWLVRLHNEFGVKLQLPININCDN*SAIKLLKNPIFHERTKHIDTQEHFVREKCKEKL 4235
K +W+ RL E G K Q I + CD+ SA+ + +NP FH RTKHI Q HFVRE ++
Sbjct: 1214 KAIWIQRLLEELGHKQQ-KILVFCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEDGS 1272
Query: 4236 IDITYINTNKQLAGGLTKNLIGDNF 4310
+D+ I+T + LA LTK + D F
Sbjct: 1273 VDLQKIHTKENLADVLTKPINTDKF 1297
Score = 61.6 bits (148), Expect(2) = 2e-21
Identities = 39/103 (37%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Frame = +1
Query: 3733 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXXIEAYYDANF 3912
TRP+I V ++R+ NP H+ A I +YI+GT + Y D++F
Sbjct: 1106 TRPDIAQAVGVVSRYMANPGGEHWIAVKRILRYIRGT-SDVALCYGGSEFTVRGYVDSDF 1164
Query: 3913 DKSRDG-KSTIGYPVKIGGNLISWTSQKQKVVARSTTEEEYRA 4038
D KST GY + G +SW S+ Q VVA STTE EY A
Sbjct: 1165 AGDLDKRKSTTGYVFTLAGAAVSWVSKLQTVVALSTTEAEYMA 1207
>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
Length = 1387
Score = 82.0 bits (201), Expect(5) = 7e-68
Identities = 47/114 (41%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Frame = +1
Query: 3733 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXXIEAYYDANF 3912
TRP+I + V+ +++F ++P H+ A + I +YIKG+ + Y DA++
Sbjct: 1178 TRPDISFAVSVVSQFLNSPCEDHWNAVIRILKYIKGSPGKGLLYGHNNHTKVVCYSDADW 1237
Query: 3913 DKS-RDGKSTIGYPVKIGGNLISWTSQKQKVVARSTTEEEYRAFGDLTINLCGL 4071
S D +ST GY V IG NLISW S+KQ VVARS+ E EYRA T L L
Sbjct: 1238 AGSPSDRRSTSGYCVSIGDNLISWKSKKQSVVARSSAEAEYRAMASATCELIWL 1291
Score = 81.3 bits (199), Expect(5) = 7e-68
Identities = 39/101 (38%), Positives = 64/101 (63%)
Frame = +1
Query: 2839 LKVPKNSEVSLTKNHAKLAMQKELDMIGKMGAWRLKALPPDKKEIGSR*IYSVKLKSIES 3018
+ +PK+ +L + AM E++ + G W L LP K +G R ++++K+ +
Sbjct: 873 VSIPKSVGDALAHPGWRQAMLDEMNALQNNGTWELVPLPSRKSVVGCRWVFAIKVGPDGT 932
Query: 3019 LDKYKVRLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIA 3141
+D+ K RLVA+GYTQ+ G+DY DTF+P AKM ++RL I++A
Sbjct: 933 IDRLKARLVAKGYTQIFGLDYGDTFSPVAKMASVRLFIAMA 973
Score = 72.4 bits (176), Expect(5) = 7e-68
Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Frame = +3
Query: 3153 WEIHHLDVKTIFLNGDIE*EIYMKIPKGYPT---NENLSCRFLKSIYDLKQAPRAWYTKL 3323
W ++ LDVK FLNGD++ EIYM+ P G+ + L CR KS+Y LKQ+PRAW+ K
Sbjct: 978 WPLYQLDVKNAFLNGDLQEEIYMEQPPGFVAQGESSGLVCRLRKSLYGLKQSPRAWFGKF 1037
Query: 3324 EDFLVNKGFLKLDADLNLF 3380
+ + G + +AD ++F
Sbjct: 1038 SNVVQQFGMTRSEADHSVF 1056
Score = 67.4 bits (163), Expect(5) = 7e-68
Identities = 34/82 (41%), Positives = 49/82 (59%)
Frame = +3
Query: 4056 KLMWLVRLHNEFGVKLQLPININCDN*SAIKLLKNPIFHERTKHIDTQEHFVREKCKEKL 4235
+L+WL +L E + + CDN +A+ + NP+FHERTKHI+ HF+REK
Sbjct: 1287 ELIWLKQLLKELQFGDVTQMTLICDNQAALHISSNPVFHERTKHIEIDCHFIREKIISGD 1346
Query: 4236 IDITYINTNKQLAGGLTKNLIG 4301
I ++N+N QLA TK+L G
Sbjct: 1347 IKTEFVNSNNQLADIFTKSLRG 1368
Score = 47.4 bits (111), Expect(5) = 7e-68
Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Frame = +2
Query: 3473 KLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDN 3652
K L +F+ DLG++ ++G+++ + G +++Q YA +++E L N+K + PMD
Sbjct: 1088 KQHLCQNFQTKDLGKLRYFLGIEVAQSNTGIVISQRKYALDILEEIGLMNSKSVDTPMDP 1147
Query: 3653 GGKF---ESDQFVDK**YQAIIRNLIYLTI--PDRTYNI 3754
K + + D Y+ ++ L YLT+ PD ++ +
Sbjct: 1148 NVKLLPNQGEPLSDPEKYRRLVGKLNYLTVTRPDISFAV 1186
Score = 128 bits (321), Expect = 3e-26
Identities = 115/429 (26%), Positives = 187/429 (43%), Gaps = 10/429 (2%)
Frame = +3
Query: 1287 WCLDSSCSSHMTSNEKLLYNIRRTKNGSIIKTARQDELQVVGYGDXXXXXXXXXXXXNDV 1466
W LDS + H+T N+ ++ T G + + +V +G N V
Sbjct: 357 WVLDSGATDHITGNQSFFSSLSTT--GYLPSVTMANGYKVPSHGVGTINLFPSLSIDN-V 413
Query: 1467 LLVKNLRRNLISFNKLLVKGVTIQENTNLYTDNNLRPYYKGNYIATADCSTGIYIIKTYK 1646
L V NL+S ++L + T +L+ G I T S G+Y ++
Sbjct: 414 LYVPGSPFNLLSISRLTRSLDCVISFTK--DSVSLQDRCSGRMIGTGCESHGLYQLQI-- 469
Query: 1647 NAEANISQIT*SYGDLHKKLGHINDQYLKILCKNTFQTQTNWIKCTKIMNLV*LEK*QSN 1826
A++ I S +H +LGH + ++ L + + + + + +S+
Sbjct: 470 --SAHVGAIMDSPSLIHARLGHPSLAKMQQLVPSLSNVSSLSCESCQFGKHI-----RSS 522
Query: 1827 LSQFSKIKTIRLLELIHSDICGPLPVPSNQGFLYFATFIDDHSRYRYVYLLKKRDEIFLK 2006
+ L+HSDI GP + SN GF YF TFIDD+SR +V+L+K R E+F
Sbjct: 523 FPSSVSQRASSPFALVHSDIWGPSRIKSNLGFQYFVTFIDDYSRCTWVFLMKNRSELFSI 582
Query: 2007 FKSFRKLVQNKKNLKIAKLRNDGGLEYNSKEFNDY*FSKGIIRETTLPYNLQQNEFAERR 2186
F+ F ++N+ + I LR+D G EY S F ++ S GI+ +T+ Y QQN AER+
Sbjct: 583 FQLFYNEIKNQFGISIRILRSDNGREYLSHSFKNFMASHGILHQTSCAYTPQQNGVAERK 642
Query: 2187 NRTLMECTR*E*CQFT*KLVGRCP---------SNCKLCHHHWSNQSIGMKIPR-LLWKS 2336
NR L+E TR T + G P S C L + + + KIP +L+
Sbjct: 643 NRHLVETTR------TILIHGDVPQHFWGDAVLSACYLI-NRMPSSVLDNKIPHSILFPH 695
Query: 2337 EPINWGHFKIFEEEYF*LVSKEHRKKLDSKVKNEIFIGIPLGTKGYKLIDKDSRKIIVSR 2516
+P++ K+F F KL + +F+G KGYK + +S
Sbjct: 696 DPLHSLPPKVFGSTCFVHNFSPGLDKLSPRSHKCVFLGFTRSQKGYKCFSPSLNRYFISA 755
Query: 2517 DLKLKKNKV 2543
D+ ++ +
Sbjct: 756 DVTFSESSL 764
>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
Length = 1300
Score = 84.7 bits (208), Expect(5) = 3e-67
Identities = 40/100 (40%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
Frame = +3
Query: 3150 NWEIHHLDVKTIFLNGDIE*EIYMKIPKGYPT--NENLSCRFLKSIYDLKQAPRAWYTKL 3323
+W++ +DVK FL+G+++ EIYM P G+ + + C+ K++Y LKQAPRAWY K+
Sbjct: 886 DWDLWQMDVKNAFLHGELDREIYMNQPMGFQSQGHPEYVCKLRKALYGLKQAPRAWYGKI 945
Query: 3324 EDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILIT 3443
+FL G+ AD +LF K G+ I+L + D++IT
Sbjct: 946 AEFLTQSGYSVTPADSSLFVKANGGKLAIVLVYVDDLIIT 985
Score = 79.3 bits (194), Expect(5) = 3e-67
Identities = 37/103 (35%), Positives = 58/103 (56%)
Frame = +3
Query: 4062 MWLVRLHNEFGVKLQLPININCDN*SAIKLLKNPIFHERTKHIDTQEHFVREKCKEKLID 4241
MWL+RL N+ + + + CDN SA++L +NP+FH RTKH++ HF+REK ++ ++
Sbjct: 1197 MWLIRLMNDLHQLVDYAVPLYCDNQSAVRLAENPVFHARTKHVEVHYHFIREKVLKEEVE 1256
Query: 4242 ITYINTNKQLAGGLTKNLIGDNFTRFVKHSDLSMIGSNDLSEE 4370
+ I + Q+A TK L G F F + I D+ E
Sbjct: 1257 LNQIKSEDQVADLFTKGLSGSKFESFCHQLGMVKILEADVEGE 1299
Score = 70.1 bits (170), Expect(5) = 3e-67
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Frame = +1
Query: 3733 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXXIEAYYDANF 3912
T P+I Y V ++R+ NP H +A I +++KGTI + Y DA++
Sbjct: 1086 TXPDISYAVGVMSRYMQNPKKPHLEAVRRILRHVKGTIDYGLLYKKXEDCKLVGYCDADY 1145
Query: 3913 DKSRDGK-STIGYPVKIGGNLISWTSQKQKVVARSTTEEEYRA 4038
D + ST GY +G ISW S++Q V+ STTE EYRA
Sbjct: 1146 AGDHDTRXSTTGYVFMLGSGAISWCSKRQPTVSLSTTEAEYRA 1188
Score = 63.9 bits (154), Expect(5) = 3e-67
Identities = 32/111 (28%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Frame = +1
Query: 2815 ANITI--EVFLKVPKNSEVSLTKNHAKLAMQKELDMIGKMGAWRLKALPPDKKEIGSR*I 2988
AN+ I + K P + + AM +E+ + + W L P D + + +
Sbjct: 772 ANVAIVEDANAKEPXTFAEAFQNSDWSKAMXEEIAALKRNQTWELVPKPRDVEPXSCKWV 831
Query: 2989 YSVKLKSIESLDKYKVRLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIA 3141
Y +K ++ S++++K LVA+G++Q G+DY +TF+P K+ T+R+L+++A
Sbjct: 832 YKIKRRTDGSIERHKAXLVARGFSQQYGLDYDETFSPVXKLTTVRVLLALA 882
Score = 50.1 bits (118), Expect(5) = 3e-67
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Frame = +2
Query: 3467 RCKLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPM 3646
R K L FE+ +LG++ ++GL++ + G L Q+ YAK L+ ++ + K I PM
Sbjct: 994 RTKENLSVRFEMKELGQLKHFLGLEVDRTNEGIFLCQQKYAKDLLKKFGMLECKPISTPM 1053
Query: 3647 DNGGKF---ESDQFVDK**YQAIIRNLIYLTI--PDRTYNI 3754
+ K E D Y+ ++ +L+YLT+ PD +Y +
Sbjct: 1054 EPNAKMCEHEGKDLKDATMYRQLVGSLLYLTLTXPDISYAV 1094
Score = 84.3 bits (207), Expect = 4e-13
Identities = 108/448 (24%), Positives = 174/448 (38%), Gaps = 26/448 (5%)
Frame = +3
Query: 1257 VCLTSEE---ENSWCLDSSCSSHMTSNEKLLYNIRRTKNGSIIKTARQDELQVVGYGDXX 1427
+ TSE+ E W +DS CS+HMT +++ L ++ K ++ TA +L + G+
Sbjct: 308 IATTSEQIDYEKDWIIDSGCSNHMTGDKEKLQDLSEYKGRHMVVTANNSKLPIAHIGNTV 367
Query: 1428 XXXXXXXXXXNDVLL-----VKNLRRNLISFNKLLVKGVTI---QENTNLYTDNNL--RP 1577
NDV L V +++NL+S +L G ++ ++ +Y D + P
Sbjct: 368 VSSQYNT---NDVSLQNVYHVPGMKKNLLSVAQLTSSGHSVLFGPQDVKVYHDLEVMEEP 424
Query: 1578 YYKGN-----YIATADCSTGIYIIKTYKNAEANISQIT*SYGDLHKKLGHINDQYLKILC 1742
KG Y+ +A+ + Y+ KT KN A++ H +L HI+ L ++
Sbjct: 425 VIKGRRLESVYVMSAETA---YVDKTRKNETADL---------WHMRLSHISYSKLTMMM 472
Query: 1743 KNTFQTQTNWIKCTKIMNLV*LEK*QSNLSQF--SKIKTIRLLELIHSDICGPLPVPSNQ 1916
K + ++ K + +++ + SK K LELIHSD+ GP+ S
Sbjct: 473 KKSMLKGLPQLEVRKXTICAXCQYGKAHQLPYEESKWKAKGPLELIHSDVFGPVKQASLS 532
Query: 1917 GFLYFATFIDDHSRYRYVYLLKKRDEIFLKFKSFRKLVQNKKNLKIAKLRNDGGLEYNSK 2096
G Y TFIDD SR Y+ + SF + S
Sbjct: 533 GMKYMVTFIDDFSRRVYLQM------------SF----------------------FTSS 558
Query: 2097 EFNDY*FSKGIIRETTLPYNLQQNEFAERRNRTLMECTR*E*CQFT*KLV-----GRCPS 2261
E +Y S T QQN ER+NR L E R K V
Sbjct: 559 ENXEYAIS------FTCANTPQQNGVXERKNRHLAEICR---SMLHAKNVPGXFWAEXMK 609
Query: 2262 NCKLCHHHWSNQSIGMKIP-RLLWKSEPINWGHFKIFEEEYF*LVSKEHRKKLDSKVKNE 2438
+ Q + P LW +P +F++F + V R K+D K
Sbjct: 610 TAAFVINRLPQQRLNFSSPFEKLWNIKP-TVSYFRVFGCVCYVFVPNHLRSKMDKKAVRC 668
Query: 2439 IFIGIPLGTKGYKLIDKDSRKIIVSRDL 2522
+ +G K ++ D + K SR++
Sbjct: 669 VLVGYDSQRKXWRCCDPTTGKCYTSRNV 696
>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 77.8 bits (190), Expect(5) = 3e-65
Identities = 40/98 (40%), Positives = 59/98 (60%)
Frame = +1
Query: 2848 PKNSEVSLTKNHAKLAMQKELDMIGKMGAWRLKALPPDKKEIGSR*IYSVKLKSIESLDK 3027
PKN + +LT AMQ+EL+ + W L P IG++ I+ K + +
Sbjct: 1068 PKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITR 1127
Query: 3028 YKVRLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIA 3141
K RLVAQGYTQ+EG+D+ +TFAP A++ +IRLL+ +A
Sbjct: 1128 NKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVA 1165
Score = 77.4 bits (189), Expect(5) = 3e-65
Identities = 40/98 (40%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Frame = +3
Query: 3153 WEIHHLDVKTIFLNGDIE*EIYMKIPKGY--PTNENLSCRFLKSIYDLKQAPRAWYTKLE 3326
++++ +DVK+ FLNG + E+Y++ PKG+ PT+ + R K++Y LKQAPRAWY +L
Sbjct: 1170 FKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLT 1229
Query: 3327 DFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 3440
+FL +G+ K D LF K EN +I +VD ++
Sbjct: 1230 EFLTQQGYRKGGIDKTLFVK-QDAENLMIAQIYVDDIV 1266
Score = 71.2 bits (173), Expect(5) = 3e-65
Identities = 32/90 (35%), Positives = 59/90 (65%)
Frame = +3
Query: 4047 SYNKLMWLVRLHNEFGVKLQLPININCDN*SAIKLLKNPIFHERTKHIDTQEHFVREKCK 4226
S ++L+W+ ++ E+ V+ + + + CDN SAI + KNP+ H RTKHID + H++R+
Sbjct: 1475 SCSQLVWMKQMLKEYNVEQDV-MTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDLVD 1533
Query: 4227 EKLIDITYINTNKQLAGGLTKNLIGDNFTR 4316
+K+I + +++T +Q+A TK L + F +
Sbjct: 1534 DKVITLKHVDTEEQIADIFTKALDANQFEK 1563
Score = 67.4 bits (163), Expect(5) = 3e-65
Identities = 41/105 (39%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Frame = +1
Query: 3733 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXXIEAYYDANF 3912
+RP+I Y V AR++ NP I H I +Y+ GT + Y DA++
Sbjct: 1369 SRPDITYAVGVCARYQANPKISHLNQVKRILKYVNGTSDYGIMYCHCSSSMLVGYCDADW 1428
Query: 3913 DKSRDG-KSTIGYPVKIGGNLISWTSQKQKVVARSTTEEEYRAFG 4044
S D KST G +G NLISW S+KQ V+ ST E EY A G
Sbjct: 1429 AGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAAG 1473
Score = 47.8 bits (112), Expect(5) = 3e-65
Identities = 28/97 (28%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Frame = +2
Query: 3479 RLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDNGG 3658
++++ FE++ +GE+ ++GLQ+ ++ + L+Q YAK ++ ++ ++N P
Sbjct: 1281 QMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHL 1340
Query: 3659 KFESDQ---FVDK**YQAIIRNLIYLTI--PDRTYNI 3754
K D+ VD+ Y+++I +L+YLT PD TY +
Sbjct: 1341 KLSKDEAGTSVDQKPYRSMIGSLLYLTASRPDITYAV 1377
Score = 135 bits (339), Expect = 2e-28
Identities = 130/497 (26%), Positives = 219/497 (44%), Gaps = 27/497 (5%)
Frame = +3
Query: 1242 NIIVEVCLTSEEENSWCLDSSCSSHMTSNEKLLYNIRRTKNGSIIKTARQDELQVVGYGD 1421
+++V L + + W LDS CS HMT ++ L NI S + + +++G G
Sbjct: 547 SLVVHTSLRASAKEDWYLDSGCSRHMTGVKEFLLNIEPCST-SYVTFGDGSKGKIIGMGK 605
Query: 1422 XXXXXXXXXXXXNDVLLVKNLRRNLISFNKLLVKG--VTIQENTNLYTDNNLRPYYKGN- 1592
N VLLVK L NLIS ++L +G V ++ L T+ KG+
Sbjct: 606 LVHDGLPSL---NKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSR 662
Query: 1593 -----YIATADCSTGIYIIKTYKNAEANISQIT*SYGDLHKKLGHINDQYLK-ILCKNTF 1754
Y+ T ++ + K E I H++ GH++ + +K IL K+
Sbjct: 663 SKDNCYLWTPQETSYSSTCLSSKEDEVRI---------WHQRFGHLHLRGMKKILDKSAV 713
Query: 1755 QTQTNW-IKCTKIMNLV*LEK*QSNLS--QFSKIKTIRLLELIHSDICGPLPVPSNQGFL 1925
+ N I+ +I + K Q +S + T R+LEL+H D+ GP+ V S G
Sbjct: 714 RGIPNLKIEEGRICGECQIGK-QVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKR 772
Query: 1926 YFATFIDDHSRYRYVYLLKKRDEIFLKFKSFRKLVQNKKNLKIAKLRNDGGLEYNSKEFN 2105
Y +DD SR+ +V ++++ F FK +Q +K+ I ++R+D G E+ + F
Sbjct: 773 YAYVVVDDFSRFTWVNFIREKSGTFEVFKKLSLRLQREKDCVIKRIRSDHGREFENSRFT 832
Query: 2106 DY*FSKGIIRETTLPYNLQQNEFAERRNRTLMECTR*E*CQFT*KLVGRCPSNC------ 2267
++ S+GI E + QQN ER+NRTL E R P N
Sbjct: 833 EFCTSEGITHEFSAAITPQQNGIVERKNRTLQEAAR------VMLHAKELPYNLWAEAMN 886
Query: 2268 KLCHHHWSNQSIGMKIPRLL---WKSEPINWGHFKIFEEEYF*LVSKEHRKKLDSKVKNE 2438
C+ H + ++ P L WK + HF IF + L +E R+K+D K
Sbjct: 887 TACYIH-NRVTLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAG 945
Query: 2439 IFIGIPLGTKGYKLIDKDSRKI-----IVSRDLKLKKNKVTIEEVIDNAE-INPLIITND 2600
IF+G ++ Y++ + +R + +V DL + K E+V + + + + +
Sbjct: 946 IFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLSPARKKDVEEDVRTSGDNVADAAKSGE 1005
Query: 2601 RSKNPTTVNDNSPSAKP 2651
++N + D S +P
Sbjct: 1006 NAENSDSATDESNINQP 1022
>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 77.8 bits (190), Expect(5) = 4e-65
Identities = 40/98 (40%), Positives = 59/98 (60%)
Frame = +1
Query: 2848 PKNSEVSLTKNHAKLAMQKELDMIGKMGAWRLKALPPDKKEIGSR*IYSVKLKSIESLDK 3027
PKN + +LT AMQ+EL+ + W L P IG++ I+ K + +
Sbjct: 1068 PKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITR 1127
Query: 3028 YKVRLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIA 3141
K RLVAQGYTQ+EG+D+ +TFAP A++ +IRLL+ +A
Sbjct: 1128 NKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVA 1165
Score = 77.4 bits (189), Expect(5) = 4e-65
Identities = 40/98 (40%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Frame = +3
Query: 3153 WEIHHLDVKTIFLNGDIE*EIYMKIPKGY--PTNENLSCRFLKSIYDLKQAPRAWYTKLE 3326
++++ +DVK+ FLNG + E+Y++ PKG+ PT+ + R K++Y LKQAPRAWY +L
Sbjct: 1170 FKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLT 1229
Query: 3327 DFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 3440
+FL +G+ K D LF K EN +I +VD ++
Sbjct: 1230 EFLTQQGYRKGGIDKTLFVK-QDAENLMIAQIYVDDIV 1266
Score = 71.2 bits (173), Expect(5) = 4e-65
Identities = 32/90 (35%), Positives = 59/90 (65%)
Frame = +3
Query: 4047 SYNKLMWLVRLHNEFGVKLQLPININCDN*SAIKLLKNPIFHERTKHIDTQEHFVREKCK 4226
S ++L+W+ ++ E+ V+ + + + CDN SAI + KNP+ H RTKHID + H++R+
Sbjct: 1475 SCSQLVWMKQMLKEYNVEQDV-MTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDLVD 1533
Query: 4227 EKLIDITYINTNKQLAGGLTKNLIGDNFTR 4316
+K+I + +++T +Q+A TK L + F +
Sbjct: 1534 DKVITLKHVDTEEQIADIFTKALDANQFEK 1563
Score = 67.0 bits (162), Expect(5) = 4e-65
Identities = 41/105 (39%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Frame = +1
Query: 3733 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXXIEAYYDANF 3912
+RP+I Y V AR++ NP I H I +Y+ GT + Y DA++
Sbjct: 1369 SRPDITYAVGVCARYQANPKISHLTQVKRILKYVNGTSDYGIMYCHCSNPMLVGYCDADW 1428
Query: 3913 DKSRDG-KSTIGYPVKIGGNLISWTSQKQKVVARSTTEEEYRAFG 4044
S D KST G +G NLISW S+KQ V+ ST E EY A G
Sbjct: 1429 AGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAAG 1473
Score = 47.8 bits (112), Expect(5) = 4e-65
Identities = 28/97 (28%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Frame = +2
Query: 3479 RLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDNGG 3658
++++ FE++ +GE+ ++GLQ+ ++ + L+Q YAK ++ ++ ++N P
Sbjct: 1281 QMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHL 1340
Query: 3659 KFESDQ---FVDK**YQAIIRNLIYLTI--PDRTYNI 3754
K D+ VD+ Y+++I +L+YLT PD TY +
Sbjct: 1341 KLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAV 1377
Score = 135 bits (339), Expect = 2e-28
Identities = 127/466 (27%), Positives = 208/466 (44%), Gaps = 27/466 (5%)
Frame = +3
Query: 1242 NIIVEVCLTSEEENSWCLDSSCSSHMTSNEKLLYNIRRTKNGSIIKTARQDELQVVGYGD 1421
+++V L + + W LDS CS HMT ++ L NI S + + +++G G
Sbjct: 547 SLVVHTSLRASAKEDWYLDSGCSRHMTGVKEFLLNIEPCST-SYVTFGDGSKGKIIGMG- 604
Query: 1422 XXXXXXXXXXXXNDVLLVKNLRRNLISFNKLLVKG--VTIQENTNLYTDNNLRPYYKGN- 1592
N VLLVK L NLIS ++L +G V ++ L T+ KG+
Sbjct: 605 --KLVHDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSR 662
Query: 1593 -----YIATADCSTGIYIIKTYKNAEANISQIT*SYGDLHKKLGHINDQYL-KILCKNTF 1754
Y+ T ++ + K E I H++ GH++ + + KI+ K
Sbjct: 663 SKDNCYLWTPQETSYSSTCLSSKEDEVRI---------WHQRFGHLHLRGMKKIIDKGAV 713
Query: 1755 QTQTNW-IKCTKIMNLV*LEK*QSNLSQFSKIK---TIRLLELIHSDICGPLPVPSNQGF 1922
+ N I+ +I + K Q +S K++ T R+LEL+H D+ GP+ V S G
Sbjct: 714 RGIPNLKIEEGRICGECQIGK-QVKMSH-QKLRHQTTSRVLELLHMDLMGPMQVESLGGK 771
Query: 1923 LYFATFIDDHSRYRYVYLLKKRDEIFLKFKSFRKLVQNKKNLKIAKLRNDGGLEYNSKEF 2102
Y +DD SR+ +V ++++ E F FK +Q +K+ I ++R+D G E+ + F
Sbjct: 772 RYAYVVVDDFSRFTWVNFIREKSETFEVFKELSLRLQREKDCVIKRIRSDHGREFENSRF 831
Query: 2103 NDY*FSKGIIRETTLPYNLQQNEFAERRNRTLMECTR*E*CQFT*KLVGRCPSNC----- 2267
++ S+GI E + QQN ER+NRTL E R P N
Sbjct: 832 TEFCTSEGITHEFSAAITPQQNGIVERKNRTLQEAAR------VMLHAKELPYNLWAEAM 885
Query: 2268 -KLCHHHWSNQSIGMKIPRLL---WKSEPINWGHFKIFEEEYF*LVSKEHRKKLDSKVKN 2435
C+ H + ++ P L WK + HF IF + L +E R+K+D K
Sbjct: 886 NTACYIH-NRVTLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPKSDA 944
Query: 2436 EIFIGIPLGTKGYKLIDKDSRKI-----IVSRDLKLKKNKVTIEEV 2558
IF+G ++ Y++ + +R + +V DL + K E+V
Sbjct: 945 GIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLSPARKKDVEEDV 990
>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
Length = 1574
Score = 77.8 bits (190), Expect(5) = 4e-65
Identities = 40/98 (40%), Positives = 59/98 (60%)
Frame = +1
Query: 2848 PKNSEVSLTKNHAKLAMQKELDMIGKMGAWRLKALPPDKKEIGSR*IYSVKLKSIESLDK 3027
PKN + +LT AMQ+EL+ + W L P IG++ I+ K + +
Sbjct: 1066 PKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITR 1125
Query: 3028 YKVRLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIA 3141
K RLVAQGYTQ+EG+D+ +TFAP A++ +IRLL+ +A
Sbjct: 1126 NKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVA 1163
Score = 77.4 bits (189), Expect(5) = 4e-65
Identities = 40/98 (40%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Frame = +3
Query: 3153 WEIHHLDVKTIFLNGDIE*EIYMKIPKGY--PTNENLSCRFLKSIYDLKQAPRAWYTKLE 3326
++++ +DVK+ FLNG + E+Y++ PKG+ PT+ + R K++Y LKQAPRAWY +L
Sbjct: 1168 FKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLT 1227
Query: 3327 DFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 3440
+FL +G+ K D LF K EN +I +VD ++
Sbjct: 1228 EFLTQQGYRKGGIDKTLFVK-QDAENLMIAQIYVDDIV 1264
Score = 71.2 bits (173), Expect(5) = 4e-65
Identities = 32/90 (35%), Positives = 59/90 (65%)
Frame = +3
Query: 4047 SYNKLMWLVRLHNEFGVKLQLPININCDN*SAIKLLKNPIFHERTKHIDTQEHFVREKCK 4226
S ++L+W+ ++ E+ V+ + + + CDN SAI + KNP+ H RTKHID + H++R+
Sbjct: 1473 SCSQLVWMKQMLKEYNVEQDV-MTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDLVD 1531
Query: 4227 EKLIDITYINTNKQLAGGLTKNLIGDNFTR 4316
+K+I + +++T +Q+A TK L + F +
Sbjct: 1532 DKVITLKHVDTEEQIADIFTKALDANQFEK 1561
Score = 67.0 bits (162), Expect(5) = 4e-65
Identities = 41/105 (39%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Frame = +1
Query: 3733 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXXIEAYYDANF 3912
+RP+I Y V AR++ NP I H I +Y+ GT + Y DA++
Sbjct: 1367 SRPDITYAVGVCARYQANPKISHLTQVKRILKYVNGTSDYGIMYCHCSNPMLVGYCDADW 1426
Query: 3913 DKSRDG-KSTIGYPVKIGGNLISWTSQKQKVVARSTTEEEYRAFG 4044
S D KST G +G NLISW S+KQ V+ ST E EY A G
Sbjct: 1427 AGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAAG 1471
Score = 47.8 bits (112), Expect(5) = 4e-65
Identities = 28/97 (28%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Frame = +2
Query: 3479 RLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDNGG 3658
++++ FE++ +GE+ ++GLQ+ ++ + L+Q YAK ++ ++ ++N P
Sbjct: 1279 QMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHL 1338
Query: 3659 KFESDQ---FVDK**YQAIIRNLIYLTI--PDRTYNI 3754
K D+ VD+ Y+++I +L+YLT PD TY +
Sbjct: 1339 KLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAV 1375
Score = 134 bits (337), Expect = 4e-28
Identities = 129/497 (25%), Positives = 218/497 (43%), Gaps = 27/497 (5%)
Frame = +3
Query: 1242 NIIVEVCLTSEEENSWCLDSSCSSHMTSNEKLLYNIRRTKNGSIIKTARQDELQVVGYGD 1421
+++V L + + W LDS CS HMT ++ L NI S + + +++G G
Sbjct: 545 SLVVHTSLRASAKEDWYLDSGCSRHMTGVKEFLLNIEPCST-SYVTFGDGSKGKIIGMG- 602
Query: 1422 XXXXXXXXXXXXNDVLLVKNLRRNLISFNKLLVKG--VTIQENTNLYTDNNLRPYYKGN- 1592
N VLLVK L NLIS ++L +G V ++ L T+ KG+
Sbjct: 603 --KLVHDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSR 660
Query: 1593 -----YIATADCSTGIYIIKTYKNAEANISQIT*SYGDLHKKLGHINDQYL-KILCKNTF 1754
Y+ T ++ + K E I H++ GH++ + + KI+ K
Sbjct: 661 SKDNCYLWTPQETSYSSTCLSSKEDEVRI---------WHQRFGHLHLRGMKKIIDKGAV 711
Query: 1755 QTQTNW-IKCTKIMNLV*LEK*QSNLS--QFSKIKTIRLLELIHSDICGPLPVPSNQGFL 1925
+ N I+ +I + K Q +S + T R+LEL+H D+ GP+ V S G
Sbjct: 712 RGIPNLKIEEGRICGECQIGK-QVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKR 770
Query: 1926 YFATFIDDHSRYRYVYLLKKRDEIFLKFKSFRKLVQNKKNLKIAKLRNDGGLEYNSKEFN 2105
Y +DD SR+ +V ++++ E F FK +Q +K+ I ++R+D G E+ +
Sbjct: 771 YAYVVVDDFSRFTWVKFIREKSETFEVFKELSLRLQREKDCVIKRIRSDHGREFENSRLT 830
Query: 2106 DY*FSKGIIRETTLPYNLQQNEFAERRNRTLMECTR*E*CQFT*KLVGRCPSNC------ 2267
++ S+GI E + QQN ER+NRTL E R P N
Sbjct: 831 EFCTSEGITHEFSAAITPQQNGIVERKNRTLQEAAR------VMLHAKELPYNLWAEAMN 884
Query: 2268 KLCHHHWSNQSIGMKIPRLL---WKSEPINWGHFKIFEEEYF*LVSKEHRKKLDSKVKNE 2438
C+ H + ++ P L WK + HF IF + L +E R+K+D K
Sbjct: 885 TACYIH-NRVTLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAG 943
Query: 2439 IFIGIPLGTKGYKLIDKDSRKI-----IVSRDLKLKKNKVTIEEVIDNAE-INPLIITND 2600
IF+G ++ Y++ + +R + +V DL + K E+V + + + + +
Sbjct: 944 IFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLSPARKKDVEEDVRTSGDNVADAAKSGE 1003
Query: 2601 RSKNPTTVNDNSPSAKP 2651
++N + D S +P
Sbjct: 1004 NAENSDSATDESNINQP 1020
>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
Length = 1577
Score = 77.8 bits (190), Expect(5) = 7e-65
Identities = 40/98 (40%), Positives = 59/98 (60%)
Frame = +1
Query: 2848 PKNSEVSLTKNHAKLAMQKELDMIGKMGAWRLKALPPDKKEIGSR*IYSVKLKSIESLDK 3027
PKN + +LT AMQ+EL+ + W L P IG++ I+ K + +
Sbjct: 1069 PKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITR 1128
Query: 3028 YKVRLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIA 3141
K RLVAQGYTQ+EG+D+ +TFAP A++ +IRLL+ +A
Sbjct: 1129 NKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVA 1166
Score = 75.9 bits (185), Expect(5) = 7e-65
Identities = 40/98 (40%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Frame = +3
Query: 3153 WEIHHLDVKTIFLNGDIE*EIYMKIPKGY--PTNENLSCRFLKSIYDLKQAPRAWYTKLE 3326
++++ +DVK+ FLNG + E Y++ PKG+ PT+ + R K++Y LKQAPRAWY +L
Sbjct: 1171 FKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHPDHVYRLKKALYGLKQAPRAWYERLT 1230
Query: 3327 DFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 3440
+FL +G+ K D LF K EN +I +VD ++
Sbjct: 1231 EFLTQQGYRKGGIDKTLFVK-QDAENLMIAQIYVDDIV 1267
Score = 71.6 bits (174), Expect(5) = 7e-65
Identities = 33/90 (36%), Positives = 58/90 (64%)
Frame = +3
Query: 4047 SYNKLMWLVRLHNEFGVKLQLPININCDN*SAIKLLKNPIFHERTKHIDTQEHFVREKCK 4226
S ++L+W+ ++ E+ V+ + + + CDN SAI + KNP+ H RTKHID + H++RE
Sbjct: 1476 SCSQLVWMKQMLKEYNVEQDV-MTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRELVD 1534
Query: 4227 EKLIDITYINTNKQLAGGLTKNLIGDNFTR 4316
+K+I + +++T +Q+A TK L F +
Sbjct: 1535 DKVITLEHVDTEEQIADIFTKALDAKQFEK 1564
Score = 67.4 bits (163), Expect(5) = 7e-65
Identities = 41/105 (39%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Frame = +1
Query: 3733 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXXIEAYYDANF 3912
+RP+I Y V AR++ NP I H I +Y+ GT + Y DA++
Sbjct: 1370 SRPDITYAVGVCARYQANPKISHLNQVKRILKYVNGTSDYGIMYCHCSGSMLVGYCDADW 1429
Query: 3913 DKSRDG-KSTIGYPVKIGGNLISWTSQKQKVVARSTTEEEYRAFG 4044
S D KST G +G NLISW S+KQ V+ ST E EY A G
Sbjct: 1430 AGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAAG 1474
Score = 47.8 bits (112), Expect(5) = 7e-65
Identities = 28/97 (28%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Frame = +2
Query: 3479 RLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDNGG 3658
++++ FE++ +GE+ ++GLQ+ ++ + L+Q YAK ++ ++ ++N P
Sbjct: 1282 QMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASHKRTPAPTHL 1341
Query: 3659 KFESDQ---FVDK**YQAIIRNLIYLTI--PDRTYNI 3754
K D+ VD+ Y+++I +L+YLT PD TY +
Sbjct: 1342 KLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAV 1378
Score = 133 bits (334), Expect = 8e-28
Identities = 134/501 (26%), Positives = 215/501 (42%), Gaps = 31/501 (6%)
Frame = +3
Query: 1242 NIIVEVCLTSEEENSWCLDSSCSSHMTSNEKLLYNIRRTKNGSIIKTARQDELQVVGYGD 1421
+++V L + + W LDS CS HMT ++ L NI S + + ++ G G
Sbjct: 548 SLVVHTSLRASAKEDWYLDSGCSRHMTGVKEFLVNIEPCST-SYVTFGDGSKGKITGMGK 606
Query: 1422 XXXXXXXXXXXXNDVLLVKNLRRNLISFNKLLVKG--VTIQENTNLYTDNNLRPYYKGN- 1592
N VLLVK L NLIS ++L +G V ++ L T+ KG+
Sbjct: 607 LVHEGLPSL---NKVLLVKGLTVNLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSR 663
Query: 1593 -----YIATADCSTGIYIIKTYKNAEANISQIT*SYGDLHKKLGHINDQYLK-ILCKNTF 1754
Y+ T S+ K E I H++ GH++ + +K I+ K
Sbjct: 664 SKDNCYLWTPQESSHSSTCLFSKEDEVKI---------WHQRFGHLHLRGMKKIIDKGAV 714
Query: 1755 QTQTNW-IKCTKIMNLV*LEK*QSNLS--QFSKIKTIRLLELIHSDICGPLPVPSNQGFL 1925
+ N I+ +I + K Q +S + T R+LEL+H D+ GP+ V S G
Sbjct: 715 RGIPNLKIEEGRICGECQIGK-QVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKR 773
Query: 1926 YFATFIDDHSRYRYVYLLKKRDEIFLKFKSFRKLVQNKKNLKIAKLRNDGGLEYNSKEFN 2105
Y +DD SR+ +V ++++ + F FK +Q +K+ I ++R+D G E+ + +F
Sbjct: 774 YAYVVVDDFSRFTWVNFIREKSDTFEVFKELSLRLQREKDCVIKRIRSDHGREFENSKFT 833
Query: 2106 DY*FSKGIIRETTLPYNLQQNEFAERRNRTLMECTR*E*CQFT*KLVGRCPSNC------ 2267
++ S+GI E + QQN ER+NRTL E R P N
Sbjct: 834 EFCTSEGITHEFSAAITPQQNGIVERKNRTLQEAAR------VMLHAKELPYNLWAEAMN 887
Query: 2268 KLCHHHWSNQSIGMKIPRLL---WKSEPINWGHFKIFEEEYF*LVSKEHRKKLDSKVKNE 2438
C+ H + ++ P L WK HF IF + L +E R+K+D K
Sbjct: 888 TACYIH-NRVTLRRGTPTTLYEIWKGRKPTVKHFHIFGSPCYILADREQRRKMDPKSDAG 946
Query: 2439 IFIGIPLGTKGYKLIDKDSRKI-----IVSRDLKLKKNKVTIEEVI---DNAEINPLIIT 2594
IF+G ++ Y++ + +R + +V DL + K E+V DN
Sbjct: 947 IFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLTPARKKDVEEDVRTSGDNVADTAKSAE 1006
Query: 2595 NDRSKNPTT--VNDNSPSAKP 2651
N + + T N N P +P
Sbjct: 1007 NAENSDSATDEPNINQPDKRP 1027
>emb|CAN60930.1| hypothetical protein VITISV_012765 [Vitis vinifera]
Length = 1201
Score = 91.7 bits (226), Expect(5) = 2e-64
Identities = 46/124 (37%), Positives = 75/124 (60%)
Frame = +1
Query: 2770 MMEEANNFIIRKNHEANITIEVFLKVPKNSEVSLTKNHAKLAMQKELDMIGKMGAWRLKA 2949
M +N + +++++ + + +P + + +L K M +E+ + K W L
Sbjct: 663 MSNYVSNHRLSESNKSFVNQLSTVAIPNSVQEALADXRWKAXMNEEMKSLQKNETWELVE 722
Query: 2950 LPPDKKEIGSR*IYSVKLKSIESLDKYKVRLVAQGYTQLEGIDYTDTFAPTAKMMTIRLL 3129
PP KK +G R IY+VK K+ ++++K RLVA+GYTQ GIDYT TFAP AK+ T+R+L
Sbjct: 723 CPPGKKPVGCRWIYTVKYKADGXIERFKARLVAKGYTQTYGIDYTXTFAPVAKINTVRVL 782
Query: 3130 ISIA 3141
+S+A
Sbjct: 783 LSLA 786
Score = 72.0 bits (175), Expect(5) = 2e-64
Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Frame = +1
Query: 3730 NTRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXX-IEAYYDA 3906
+TRP++ Y ++ ++++ HNP H A M I +Y+K IE Y DA
Sbjct: 990 HTRPDLAYALSVVSQYMHNPGEQHMNAVMRILRYLKNAPGKGILFAKNVNHQSIEVYTDA 1049
Query: 3907 NFDKSRDGK-STIGYPVKIGGNLISWTSQKQKVVARSTTEEEYRAFGDLTINLC 4065
++ + D + ST GY +GGNL++W S+KQ VVARS+ E E+R + + LC
Sbjct: 1050 DWXGAVDDRRSTSGYFTFVGGNLVTWKSKKQNVVARSSAEAEFRG---MALGLC 1100
Score = 67.0 bits (162), Expect(5) = 2e-64
Identities = 32/101 (31%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Frame = +3
Query: 3150 NWEIHHLDVKTIFLNGDIE*EIYMKIPKGYPTNENLS---CRFLKSIYDLKQAPRAWYTK 3320
+W + DVK FL+G++ E+YM +P G +E C+ KS+Y LKQ+PRAW+ +
Sbjct: 790 DWPLQQFDVKNXFLHGELSEEVYMDLPPGCMVSEKQCQKVCKLKKSLYGLKQSPRAWFGR 849
Query: 3321 LEDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILIT 3443
+ G+ + ++D LF K G+ ++ + D+++T
Sbjct: 850 FTKSMRAFGYRQSNSDHTLFLKKQHGKITALIVYVDDMVVT 890
Score = 63.9 bits (154), Expect(5) = 2e-64
Identities = 29/87 (33%), Positives = 51/87 (58%)
Frame = +3
Query: 4062 MWLVRLHNEFGVKLQLPININCDN*SAIKLLKNPIFHERTKHIDTQEHFVREKCKEKLID 4241
+WL L + G + PI + CDN +A + N + H+RTKH++ F++EK +K+++
Sbjct: 1103 LWLRLLLXDLGYLSRQPIRLFCDNKAACDIAHNXVQHDRTKHVEVDRFFIKEKLDDKIVE 1162
Query: 4242 ITYINTNKQLAGGLTKNLIGDNFTRFV 4322
+ I + QLA LTK + F++F+
Sbjct: 1163 LPKIRSEDQLADILTKAVSSQVFSKFL 1189
Score = 44.7 bits (104), Expect(5) = 2e-64
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Frame = +2
Query: 3482 LKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDNGGK 3661
L FE+ DLG + ++G+++ + G L+Q YA L+ E + + + P++ G K
Sbjct: 904 LSREFEMKDLGPLKYFLGIEVSRSSEGIFLSQRKYALDLLQETGMSGCQPVNTPIEEGLK 963
Query: 3662 F--ESDQF-VDK**YQAIIRNLIYL--TIPDRTY 3748
E +Q DK YQ ++ L+YL T PD Y
Sbjct: 964 LCVEPNQVSTDKGRYQRLVGRLMYLAHTRPDLAY 997
Score = 112 bits (281), Expect = 1e-21
Identities = 120/456 (26%), Positives = 191/456 (41%), Gaps = 42/456 (9%)
Frame = +3
Query: 1281 NSWCLDSSCSSHMTSNEKLLYNIRRTKNGSIIKTARQDELQVVGYGDXXXXXXXXXXXXN 1460
++W +DS + HMT + + + +R + I+ TA + V+G +
Sbjct: 128 SAWIIDSGATDHMTFDSRQVSPLRPSSQ-KIVSTANGNTTPVIGEXSLTLTDTLNL---D 183
Query: 1461 DVLLVKNLRRNLISFNKLLVK-----------------------GVTIQENTNLYTDNNL 1571
VL+V +L NL+S +++ G I+ Y D
Sbjct: 184 SVLVVPSLDYNLLSVSQITAALSCIVIFWPEFCVIKDIQTRQTIGCGIKRGKLYYLDLQS 243
Query: 1572 RPYYKGNYIATADCSTGIYIIKTYKNAEANISQIT*SYGDLHKKLGHINDQYLKILCKNT 1751
+ K AD S G E S+I H++L H + YLK L +
Sbjct: 244 KDSNKLQQALXADGSEG----------EKKKSEIWL----WHRRLXHASFGYLKKLFPSX 289
Query: 1752 F-QTQTNWIKCTKIMNLV*LEK*QSNLSQFSKI--KTIRLLELIHSDICGPLPVPSNQGF 1922
F ++ + +C I L +S+ F I K+ +IHSD+ GP VP+ G
Sbjct: 290 FAKSDISGFRCD-ICELA-----KSHXVSFPLILNKSPFPFMVIHSDVWGPSKVPTLSGS 343
Query: 1923 LYFATFIDDHSRYRYVYLLKKRDEIFLKFKSFRKLVQNKKNLKIAKLRNDGGLEYNSKEF 2102
+F TFIDD +R ++ L+K +DE+ L F+ F K+++ + N K+ LR+D G EY S +
Sbjct: 344 RWFVTFIDDCTRMTWLCLMKTKDEVNLLFQXFHKMIETQYNAKVRVLRSDNGGEYQSSDL 403
Query: 2103 NDY*FSKGIIRETTLPYNLQQNEFAERRNRTLMECTR-------------*E*CQFT*KL 2243
Y II +TT QQN AER+NR L+E R E L
Sbjct: 404 QKYLEGXDIIHQTTCSNTPQQNGVAERKNRHLLEVVRASLIAAKTPISYWGEAITSAAYL 463
Query: 2244 VGRCPS---NCKLCHHHWSNQSIGMKIPRLLWKSEPINWGHFKIFEEEYF*LVSKEHRKK 2414
+ R PS N + +N + +P L P ++F F + K R K
Sbjct: 464 INRVPSSSINFQTPLQALTNVVVAPTVPNL----PP------RVFGCVAFVHLHKHQRTK 513
Query: 2415 LDSKVKNEIFIGIPLGTKGYKLIDKDSRKIIVSRDL 2522
L S +F+G L KGY+ +R++ ++ D+
Sbjct: 514 LTSHALQCVFVGYALHKKGYRCYHPPTRQMYITMDV 549
>emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]
Length = 1291
Score = 78.2 bits (191), Expect(5) = 2e-64
Identities = 37/83 (44%), Positives = 55/83 (66%)
Frame = +1
Query: 2893 AMQKELDMIGKMGAWRLKALPPDKKEIGSR*IYSVKLKSIESLDKYKVRLVAQGYTQLEG 3072
AM+ E+D I + G W+L LP K IG + ++ K S S+ ++K RLV +G+ Q+ G
Sbjct: 805 AMKAEIDAIERNGTWKLTELPEAKNAIGVKWVFRTKFNSDGSIFRHKARLVVKGFAQVAG 864
Query: 3073 IDYTDTFAPTAKMMTIRLLISIA 3141
+DY DTFAP A+ TIRLL+++A
Sbjct: 865 VDYGDTFAPVARHDTIRLLLALA 887
Score = 75.1 bits (183), Expect(5) = 2e-64
Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Frame = +1
Query: 3733 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXXIEAYYDANF 3912
TRP++ +P + L+RF +P +H A + +Y+KGT + Y D+++
Sbjct: 1062 TRPDLMFPASLLSRFMSSPSNVHMGVAKRVLKYVKGTTNLGIWYLKSGGVKLNGYADSDW 1121
Query: 3913 DKSRDG-KSTIGYPVKIGGNLISWTSQKQKVVARSTTEEEY 4032
S D KST GY IG +I W S+KQ+VVA+STTE EY
Sbjct: 1122 AGSVDDMKSTSGYAFTIGSGVICWNSRKQEVVAQSTTEAEY 1162
Score = 72.4 bits (176), Expect(5) = 2e-64
Identities = 32/83 (38%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Frame = +3
Query: 3144 KNNWEIHHLDVKTIFLNGDIE*EIYMKIPKGYPT--NENLSCRFLKSIYDLKQAPRAWYT 3317
+ W+++HLDVK+ FLNG + EIY++ P+G+ +E+ + K++Y LKQAPRAWY+
Sbjct: 889 QRGWKVYHLDVKSAFLNGILLEEIYVQQPEGFEVIGHEHKVYKLHKALYGLKQAPRAWYS 948
Query: 3318 KLEDFLVNKGFLKLDADLNLFTK 3386
+++ L+ GF + + + L+ K
Sbjct: 949 RIDSHLIQLGFRRSENEATLYLK 971
Score = 70.5 bits (171), Expect(5) = 2e-64
Identities = 33/82 (40%), Positives = 52/82 (63%)
Frame = +3
Query: 4053 NKLMWLVRLHNEFGVKLQLPININCDN*SAIKLLKNPIFHERTKHIDTQEHFVREKCKEK 4232
N+ +WL +L + G + P + CDN SAI + +NP+ H RTKHI+ + H +RE K
Sbjct: 1170 NQAIWLRKLLADLGREQSSPTELYCDNKSAISIAQNPVHHGRTKHINVKFHSIREAEKNS 1229
Query: 4233 LIDITYINTNKQLAGGLTKNLI 4298
L+ + Y +T++QLA +TK L+
Sbjct: 1230 LVKLHYCSTDEQLADIMTKGLL 1251
Score = 42.7 bits (99), Expect(5) = 2e-64
Identities = 20/83 (24%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +2
Query: 3494 FEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDNGGKF--- 3664
FE++DLG + ++G+++++ G ++Q YA ++ ++KL++ K + P+ K
Sbjct: 979 FEMSDLGIMNYFLGMEIYQCSWGIFISQRKYAMDILKKFKLESCKEVATPLAQNEKISKN 1038
Query: 3665 ESDQFVDK**YQAIIRNLIYLTI 3733
+ ++ + Y++++ L+YLT+
Sbjct: 1039 DGEKLEEPSAYRSLVGILLYLTV 1061
Score = 144 bits (363), Expect = 4e-31
Identities = 121/436 (27%), Positives = 187/436 (42%), Gaps = 11/436 (2%)
Frame = +3
Query: 1263 LTSEEENSWCLDSSCSSHMTSNEKLLYNIRRTKNGSIIKTARQDELQVVGYGDXXXXXXX 1442
L+S E N+W +DS C+SHMT + + +I R+ + K + +Q G G
Sbjct: 322 LSSHELNTWLIDSGCTSHMTKHLSIFTSIDRSVQPKV-KLGNGEVVQAKGKGTIAISTKK 380
Query: 1443 XXXXXNDVLLVKNLRRNLISFNKLLVKGVTIQENTNLYTDNNLRPYYKGNYIATADCSTG 1622
+VL + +L +NL+S ++L G I N +++ G IA +
Sbjct: 381 GTKIXTNVLYIPDLDQNLLSVAQMLRNGYAISFKENFCFISDVH----GTEIAKIKMNGN 436
Query: 1623 IYIIKTYKNAEANISQIT*SYGDLHKKLGHINDQYLKIL-----CKNTFQTQTNWIKCTK 1787
+ +K S HK+ GH N + L+ + ++ + N C
Sbjct: 437 SFYLKLDLVEGHVFSAKIDESVVWHKRYGHFNLKSLRFMQEAGMVEDMPEISVNAQTCES 496
Query: 1788 IMNLV*LEK*QSN-LSQFSKIKTIRLLELIHSDICGPLPVPSNQGFLYFATFIDDHSRYR 1964
L K Q Q + LELIHSDICGP+ S +YFA FIDD SR
Sbjct: 497 CE----LGKQQRQPFPQNMSKRATHKLELIHSDICGPMSTTSLSNNVYFALFIDDFSRMT 552
Query: 1965 YVYLLKKRDEIFLKFKSFRKLVQNKKNLKIAKLRNDGGLEYNSKEFNDY*FSKGIIRETT 2144
+VY LK + ++ FKSF+K+V+ + + G E +I E T
Sbjct: 553 WVYFLKTKSQVLSMFKSFKKMVETQSGQNV-----KGASE--------------LIMELT 593
Query: 2145 LPYNLQQNEFAERRNRTLMECTR*E*CQFT*K-----LVGRCPSNCKLCHHHWSNQSIGM 2309
PY+ QQN +ER+NRT+ME R C K L + + +S+
Sbjct: 594 TPYSPQQNGVSERKNRTVMEMAR---CMLFEKKLPKLLWAEAVNTSVYLLNRLPTKSVQS 650
Query: 2310 KIPRLLWKSEPINWGHFKIFEEEYF*LVSKEHRKKLDSKVKNEIFIGIPLGTKGYKLIDK 2489
K P W + H K+F + V R KLD + + +F+G +KGY++
Sbjct: 651 KTPIEAWSGVKPSVKHLKVFGSFCYLHVPSVKRGKLDERAEKGVFVGYAAESKGYRIYSL 710
Query: 2490 DSRKIIVSRDLKLKKN 2537
KI++SRD+ +N
Sbjct: 711 SRMKIVISRDVHFDEN 726
>emb|CAN62192.1| hypothetical protein VITISV_023983 [Vitis vinifera]
Length = 590
Score = 85.9 bits (211), Expect(5) = 2e-64
Identities = 40/101 (39%), Positives = 67/101 (66%)
Frame = +1
Query: 2839 LKVPKNSEVSLTKNHAKLAMQKELDMIGKMGAWRLKALPPDKKEIGSR*IYSVKLKSIES 3018
++VP N + +L K A+ +E+ + K G W + LP +K+ +G + I++VK S
Sbjct: 76 IQVPNNIQEALGSPEWKSAVYEEIHALEKNGTWEISELPAEKRPVGCKWIFTVKYNEDGS 135
Query: 3019 LDKYKVRLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIA 3141
++++K RLVA+G+TQ IDY +TFAP AK+ T+R+L+S+A
Sbjct: 136 VNRFKARLVAKGFTQSYRIDYEETFAPVAKLNTVRVLLSLA 176
Score = 77.4 bits (189), Expect(5) = 2e-64
Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Frame = +3
Query: 3150 NWEIHHLDVKTIFLNGDIE*EIYMKIPKGY--PTNENLSCRFLKSIYDLKQAPRAWYTKL 3323
+W +H LDVK FLNGD+ E+YM+IP G+ T N C+ +S+Y LKQ+PRAW+ +
Sbjct: 180 DWPLHQLDVKNAFLNGDLAEEVYMEIPPGFETQTTRNKICKLRRSLYGLKQSPRAWFERF 239
Query: 3324 EDFLVNKGFLKLDADLNLFTKILRGENKIILAFHV-DILITEPLKKDI 3464
+ + + D LF K ++L +V DI++T +++I
Sbjct: 240 TKVVKKHRYSQCQTDHTLFVKHSPVGKLVVLIVYVDDIILTGDYEEEI 287
Score = 71.6 bits (174), Expect(5) = 2e-64
Identities = 33/78 (42%), Positives = 50/78 (64%)
Frame = +3
Query: 4062 MWLVRLHNEFGVKLQLPININCDN*SAIKLLKNPIFHERTKHIDTQEHFVREKCKEKLID 4241
+WL R+ E + + P+ + CDN SAI + KNP+ H+RTKH++ HF++EK +E +I
Sbjct: 492 LWLRRVLKELKISDEEPMKMFCDNQSAISIAKNPVHHDRTKHVEIDRHFIKEKIEEGIIK 551
Query: 4242 ITYINTNKQLAGGLTKNL 4295
+ Y+ T Q A LTK L
Sbjct: 552 MLYVPTCFQTADILTKAL 569
Score = 62.0 bits (149), Expect(5) = 2e-64
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = +1
Query: 3730 NTRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXXIEAYYDAN 3909
+TR +I + V+ +++F +NP H + I +Y+K T IE + DA+
Sbjct: 380 HTRSDIGFSVSMVSQFMNNPNEEHMEVVYRILRYLKLTPGKGLFFEKNQRRDIEVFNDAD 439
Query: 3910 F-DKSRDGKSTIGYPVKIGGNLISWTSQKQKVVARSTTEEEYRAFGDLTINLCG 4068
+ +D +ST GY + GNL++W S+KQ VV+RS + E+R + ++CG
Sbjct: 440 WVGLVQDRRSTSGYCTYVWGNLVTWRSKKQSVVSRSNAKAEFRV---MAHDICG 490
Score = 42.0 bits (97), Expect(5) = 2e-64
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Frame = +2
Query: 3482 LKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDNGGK 3661
L FEI DLG + ++G+++ + G ++Q Y L+ E ++ K PMD K
Sbjct: 294 LAAEFEIKDLGNLKYFLGMEIARSRKGIFVSQRKYVLDLLKETRMLGYKPTDTPMDPTTK 353
Query: 3662 F---ESDQFVDK**YQAIIRNLIYLT 3730
E+ VDK YQ + LIYL+
Sbjct: 354 LGAKENCAPVDKGRYQRSVGKLIYLS 379
>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
Length = 1471
Score = 77.0 bits (188), Expect(5) = 8e-64
Identities = 38/85 (44%), Positives = 53/85 (62%)
Frame = +1
Query: 2893 AMQKELDMIGKMGAWRLKALPPDKKEIGSR*IYSVKLKSIESLDKYKVRLVAQGYTQLEG 3072
AM +E+ I + W L LP + IG + I+ K+ + +++YK RLVA+GY Q EG
Sbjct: 852 AMDEEIKAIDRNNTWELTELPEGSQPIGVKWIFKKKMNAQGEIERYKARLVAKGYKQKEG 911
Query: 3073 IDYTDTFAPTAKMMTIRLLISIATK 3147
IDY + FAP +M TIRLLIS A +
Sbjct: 912 IDYDEVFAPVVRMETIRLLISQAAQ 936
Score = 71.2 bits (173), Expect(5) = 8e-64
Identities = 39/98 (39%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Frame = +3
Query: 3153 WEIHHLDVKTIFLNGDIE*EIYMKIPKGYPT--NENLSCRFLKSIYDLKQAPRAWYTKLE 3326
W I +DVK+ FLNG +E E+Y++ P GY E + K++Y LKQAPRAW T+++
Sbjct: 939 WPIFQMDVKSAFLNGVLEEEVYIEQPPGYMKIGEEKKVLKLKKALYGLKQAPRAWNTRID 998
Query: 3327 DFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 3440
+ GF + + L+ K G N I +A +VD LI
Sbjct: 999 TYFKENGFKQCPYEHALYAK-NNGGNMIFVALYVDDLI 1035
Score = 65.1 bits (157), Expect(5) = 8e-64
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Frame = +1
Query: 3733 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXXIEAYYDANF 3912
TRP++ V ++RF P+ H+KA + +YI+GT+ + Y D+++
Sbjct: 1138 TRPDLSLSVGIISRFMEEPVYSHWKALKRVLRYIQGTVSLGLFYSKAEDYKLVGYSDSDW 1197
Query: 3913 -DKSRDGKSTIGYPVKIGGNLISWTSQKQKVVARSTTEEEYRA 4038
D KST GY +G SW S+KQ +V ST E EY A
Sbjct: 1198 CGDIDDRKSTSGYVFFMGNTAFSWLSKKQPIVTLSTCEAEYVA 1240
Score = 63.9 bits (154), Expect(5) = 8e-64
Identities = 37/99 (37%), Positives = 57/99 (57%)
Frame = +3
Query: 4062 MWLVRLHNEFGVKLQLPININCDN*SAIKLLKNPIFHERTKHIDTQEHFVREKCKEKLID 4241
+WL L ++ +K I DN SAI+L KNP+ HER+KHID + HF+R+ K+ +++
Sbjct: 1249 IWLRNLLSKMELKQLDATVIQVDNKSAIELAKNPVNHERSKHIDVRFHFIRDHVKKGIVE 1308
Query: 4242 ITYINTNKQLAGGLTKNLIGDNFTRFVKHSDLSMIGSND 4358
+ ++ + Q+A TK L F +F K MIG D
Sbjct: 1309 LVHVASQDQVADIFTKPLPKVFFDKFKK-----MIGMMD 1342
Score = 59.7 bits (143), Expect(5) = 8e-64
Identities = 31/96 (32%), Positives = 60/96 (62%), Gaps = 5/96 (5%)
Frame = +2
Query: 3482 LKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDNG-- 3655
++ FE+TDLG + ++GL++ + G ++QE YAK+++ +YK++N + PM+ G
Sbjct: 1051 MRREFEMTDLGLMKFFLGLEVRQKETGIFVSQEKYAKEILKKYKMENCNPVSIPMEPGAK 1110
Query: 3656 -GKFESDQFVDK**YQAIIRNLIYLTI--PDRTYNI 3754
KF+ + VD Y++++ +L YLT PD + ++
Sbjct: 1111 LSKFDGGERVDASRYRSLVGSLRYLTCTRPDLSLSV 1146
Score = 164 bits (415), Expect = 3e-37
Identities = 151/528 (28%), Positives = 240/528 (45%), Gaps = 24/528 (4%)
Frame = +3
Query: 1179 AKIELIKHNEIALLTEAKVTSNIIVEVCLTSEEENSWCLDSSCSSHMTSNEKLLYNIRRT 1358
A I++ + +AL E ++ + + + W LDS S+HM +E L ++++
Sbjct: 320 ADIKIEETTNLALEVETNEGVLLMAQDEVNINNDTLWYLDSGASNHMCGHEYLFKDMQKI 379
Query: 1359 KNGSIIKTARQDELQVVGYGDXXXXXXXXXXXX-NDVLLVKNLRRNLISFNKLLVKGVTI 1535
++G + +++V G G DV V +L+ N++S +L KG +I
Sbjct: 380 EDGHV-SFGDASKVEVKGRGTVCYLQKDGLIGSLQDVYYVPDLKTNILSMGQLTEKGYSI 438
Query: 1536 -QENTNLYTDNNLRPYYKGNYIATADCSTG-IYIIKTYKNAEANISQIT*SYGDL-HKKL 1706
++ L+ N +G +A + + +Y + E + L H +
Sbjct: 439 FLKDRFLHLKNK-----QGCLVARIEMARNRMYKLNLRSIREKCLQVNIEDKASLWHLRF 493
Query: 1707 GHINDQYLKILCK-NTFQTQTNWIKCTKIMNLV*LEK*-QSNLSQFSKIKTIRLLELIHS 1880
GH++ LK L K N N K L K +++ + ++ + LELIH+
Sbjct: 494 GHLHHGGLKELAKKNMVHGLPNMDYEGKFCEECVLSKHVRTSFPKKAQYWAKQPLELIHT 553
Query: 1881 DICGPLPVPSNQGFLYFATFIDDHSRYRYVYLLKKRDEIFLKFKSFRKLVQNKKNLKIAK 2060
DICGP+ S G YF TFIDD SR +VY LK++ E F FK F+ +V+ + +I
Sbjct: 554 DICGPITPESFSGKRYFITFIDDFSRKTWVYFLKEKSEAFEVFKKFKVMVERTTDKQIKA 613
Query: 2061 LRNDGGLEYNSKEFNDY*FSKGIIRETTLPYNLQQNEFAERRNRTLMECTR--------- 2213
+R+D G EY S F +Y +GI R T PY QQN AER+NRT+++ R
Sbjct: 614 VRSDRGGEYTSTTFMEYCEEQGIRRFLTAPYTPQQNGVAERKNRTILDMVRSMLKSKKMP 673
Query: 2214 ----*E*CQFT*KLVGRCPSNCKLCHHHWSNQSIGMKIPRLLWKSEPINWGHFKIFEEEY 2381
E Q + RCP H +Q+ P+ W + H K+F
Sbjct: 674 KEFWAEAVQCAIYVQNRCP------HVKLDDQT-----PQEAWSGQKPTVSHLKVFGSVA 722
Query: 2382 F*LVSKEHRKKLDSKVKNEIFIGIPLGTKGYKLIDKDSRKIIVSRDLKLKKNKV-----T 2546
+ V + R KL+ K K +FIG TKGYKL+D S+K+ VSRD+++ + +
Sbjct: 723 YAHVPDQRRTKLEDKSKRYVFIGYDEKTKGYKLLDPISKKVTVSRDVQINEASEWDWNNS 782
Query: 2547 IEEVIDNAEINPLIITNDRSKNPTTVNDNSPSAKPLDTSK*RSTYVLY 2690
E +I+ E +P I N T +D +P K RS + LY
Sbjct: 783 SEVMIEVGESSPTSI------NSETTDDEDEPRQP----KIRSLHDLY 820
>gb|AAC64917.1| gag-pol polyprotein [Glycine max]
Length = 1550
Score = 77.0 bits (188), Expect(5) = 1e-63
Identities = 40/98 (40%), Positives = 59/98 (60%)
Frame = +1
Query: 2848 PKNSEVSLTKNHAKLAMQKELDMIGKMGAWRLKALPPDKKEIGSR*IYSVKLKSIESLDK 3027
PKN + +LT AMQ+EL+ + W L P IG++ I+ K + +
Sbjct: 1042 PKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITR 1101
Query: 3028 YKVRLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIA 3141
K RLVAQGYTQ+EG+D+ +TFAP A++ +IRLL+ +A
Sbjct: 1102 NKARLVAQGYTQIEGVDFDETFAPGARLESIRLLLGVA 1139
Score = 75.9 bits (185), Expect(5) = 1e-63
Identities = 40/98 (40%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Frame = +3
Query: 3153 WEIHHLDVKTIFLNGDIE*EIYMKIPKGY--PTNENLSCRFLKSIYDLKQAPRAWYTKLE 3326
++++ +DVK+ FLNG + E Y++ PKG+ PT+ + R K++Y LKQAPRAWY +L
Sbjct: 1144 FKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHPDHVYRLKKALYGLKQAPRAWYERLT 1203
Query: 3327 DFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 3440
+FL +G+ K D LF K EN +I +VD ++
Sbjct: 1204 EFLTQQGYRKGGIDKTLFVK-QDAENLMIAQIYVDDIV 1240
Score = 71.2 bits (173), Expect(5) = 1e-63
Identities = 32/90 (35%), Positives = 59/90 (65%)
Frame = +3
Query: 4047 SYNKLMWLVRLHNEFGVKLQLPININCDN*SAIKLLKNPIFHERTKHIDTQEHFVREKCK 4226
S ++L+W+ ++ E+ V+ + + + CDN SAI + KNP+ H RTKHID + H++R+
Sbjct: 1449 SCSQLVWMKQMLKEYNVEQDV-MTLYCDNLSAINISKNPVQHSRTKHIDIRHHYIRDLVD 1507
Query: 4227 EKLIDITYINTNKQLAGGLTKNLIGDNFTR 4316
+K+I + +++T +Q+A TK L + F +
Sbjct: 1508 DKVITLEHVDTEEQIADIFTKALDANQFEK 1537
Score = 64.3 bits (155), Expect(5) = 1e-63
Identities = 40/105 (38%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Frame = +1
Query: 3733 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXXIEAYYDANF 3912
+RP+I Y V AR++ NP I H I +Y+ GT + Y DA++
Sbjct: 1343 SRPDITYAVGGCARYQANPKISHLNQVKRILKYVNGTSDYGIMYCHCSDSMLVGYCDADW 1402
Query: 3913 DKSRDG-KSTIGYPVKIGGNLISWTSQKQKVVARSTTEEEYRAFG 4044
S D KST G +G N ISW S+KQ V+ ST E EY A G
Sbjct: 1403 AGSVDDRKSTFGGCFYLGTNFISWFSKKQNCVSLSTAEAEYIAAG 1447
Score = 47.8 bits (112), Expect(5) = 1e-63
Identities = 28/97 (28%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Frame = +2
Query: 3479 RLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDNGG 3658
++++ FE++ +GE+ ++GLQ+ ++ + L+Q YAK ++ ++ ++N P
Sbjct: 1255 QMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASHKRTPAPTHL 1314
Query: 3659 KFESDQ---FVDK**YQAIIRNLIYLTI--PDRTYNI 3754
K D+ VD+ Y+++I +L+YLT PD TY +
Sbjct: 1315 KLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAV 1351
Score = 127 bits (319), Expect = 5e-26
Identities = 132/503 (26%), Positives = 214/503 (42%), Gaps = 31/503 (6%)
Frame = +3
Query: 1236 TSNIIVEVCLTSEEENSWCLDSSCSSHMTSNEKLLYNIRRTKNGSIIKTARQDELQVVGY 1415
T +++V L + + W LDS CS HMT ++ L NI S + + ++ G
Sbjct: 519 TVSLVVHTSLRASAKEDWYLDSGCSRHMTGVKEFLVNIEPCST-SYVTFGDGSKGKITGM 577
Query: 1416 GDXXXXXXXXXXXXNDVLLVKNLRRNLISFNKLLVKG--VTIQENTNLYTDNNLRPYYKG 1589
G N VLLVK L NLIS ++L +G V ++ L T+ KG
Sbjct: 578 GKLVHDGLPSL---NKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKG 634
Query: 1590 N------YIATADCSTGIYIIKTYKNAEANISQIT*SYGDLHKKLGHINDQYLK-ILCKN 1748
+ Y+ T ++ K E I H++ GH++ + +K I+ K
Sbjct: 635 SRSKDNCYLWTPQETSYSSTCLFSKEDEVKI---------WHQRFGHLHLRGMKKIIDKG 685
Query: 1749 TFQTQTNW-IKCTKIMNLV*LEK*QSNLS--QFSKIKTIRLLELIHSDICGPLPVPSNQG 1919
+ N I+ +I + K Q +S + T R+LEL+H D+ GP+ V S
Sbjct: 686 AVRGIPNLKIEEGRICGECQIGK-QVKMSNQKLQHQTTSRVLELLHMDLMGPMQVESLGR 744
Query: 1920 FLYFATFIDDHSRYRYVYLLKKRDEIFLKFKSFRKLVQNKKNLKIAKLRNDGGLEYNSKE 2099
Y +DD SR+ +V ++++ + F FK +Q +K+ I ++R+D G E+ + +
Sbjct: 745 KRYAYVVVDDFSRFTWVNFIREKSDTFEVFKELSLRLQREKDCVIKRIRSDHGREFENSK 804
Query: 2100 FNDY*FSKGIIRETTLPYNLQQNEFAERRNRTLMECTR*E*CQFT*KLVGRCPSNC---- 2267
F ++ S+GI E + QQN ER+NRTL E R P N
Sbjct: 805 FTEFCTSEGITHEFSAAITPQQNGIVERKNRTLQEAAR------VMLHAKELPYNLWAEA 858
Query: 2268 --KLCHHHWSNQSIGMKIPRLL---WKSEPINWGHFKIFEEEYF*LVSKEHRKKLDSKVK 2432
C+ H + ++ P L WK HF I + L +E R+K+D K
Sbjct: 859 MNTACYIH-NRVTLRRGTPTTLYEIWKGRKPTVKHFHICGSPCYILADREQRRKMDPKSD 917
Query: 2433 NEIFIGIPLGTKGYKLIDKDSRKI-----IVSRDLKLKKNKVTIEEVI---DNAEINPLI 2588
IF+G ++ Y++ + +R + +V DL + K E+V DN
Sbjct: 918 AGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLTPARKKDVEEDVRTSGDNVADTAKS 977
Query: 2589 ITNDRSKNPTT--VNDNSPSAKP 2651
N + + T N N P +P
Sbjct: 978 AENAENSDSATDEPNINQPDKRP 1000