BLASTX nr result
ID: Ephedra27_contig00012227
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00012227
(2747 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec... 833 0.0
emb|CBI24510.3| unnamed protein product [Vitis vinifera] 831 0.0
gb|EOY22974.1| Cleavage and polyadenylation specificity factor 1... 831 0.0
ref|XP_002318462.2| cleavage and polyadenylation specificity fac... 818 0.0
ref|XP_002510905.1| cleavage and polyadenylation specificity fac... 798 0.0
ref|XP_006348057.1| PREDICTED: cleavage and polyadenylation spec... 813 0.0
ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation spec... 853 0.0
ref|XP_004234158.1| PREDICTED: cleavage and polyadenylation spec... 810 0.0
gb|ESW24391.1| hypothetical protein PHAVU_004G126600g [Phaseolus... 846 0.0
ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation spec... 846 0.0
gb|EMJ21509.1| hypothetical protein PRUPE_ppa000211mg [Prunus pe... 844 0.0
ref|XP_004308159.1| PREDICTED: cleavage and polyadenylation spec... 841 0.0
ref|XP_004514987.1| PREDICTED: cleavage and polyadenylation spec... 836 0.0
ref|XP_006421760.1| hypothetical protein CICLE_v10004147mg [Citr... 835 0.0
ref|XP_006421759.1| hypothetical protein CICLE_v10004147mg [Citr... 835 0.0
ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation spec... 833 0.0
ref|XP_006490255.1| PREDICTED: cleavage and polyadenylation spec... 833 0.0
ref|XP_006851814.1| hypothetical protein AMTR_s00041p00037520 [A... 827 0.0
gb|EXC20897.1| Cleavage and polyadenylation specificity factor s... 823 0.0
ref|XP_006401932.1| hypothetical protein EUTSA_v10012441mg [Eutr... 804 0.0
>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Vitis vinifera]
Length = 1442
Score = 833 bits (2153), Expect(2) = 0.0
Identities = 427/781 (54%), Positives = 543/781 (69%), Gaps = 19/781 (2%)
Frame = -3
Query: 2292 GNEDGCRKRDAIILSFRDAKISVLEFDDSTNALRISSMHYFEGPDWWHLKRGREKFARGP 2113
G D R+RD+IIL+F+DAKISVLEFDDS + LR SSMH FEGP+W+HLKRG E FARGP
Sbjct: 122 GGGDNSRRRDSIILAFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWFHLKRGHESFARGP 181
Query: 2112 LVKSDPQGRCGGVLLYESQVIILQAAEAGSG-VGDDETSVSRRTISAHIELSYAINLHEL 1936
LVK DPQGRC GVL+Y Q+IIL+A++AG G VGD+E S +SA +E SY I+L +L
Sbjct: 182 LVKVDPQGRCSGVLVYGLQMIILKASQAGYGLVGDEEALSSGSAVSARVESSYVISLRDL 241
Query: 1935 DMKHVKDFVFIYGYIEPVMVVLHEKEPTWAGSIAWKHHTCTISALSISMTSKQHPLIWSA 1756
DMKHVKDF F++GYIEPVMV+LHE+E TWAG ++WKHHTC ISALSIS T KQHPLIWSA
Sbjct: 242 DMKHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA 301
Query: 1755 NNLPHDAYKXXXXXXXXXXXXXXXXXXLQYHSQSSSCTLALNDFARTVDGRPEIPRANVD 1576
NLPHDAYK + YHSQS+SC LALN++A + D E+PR++
Sbjct: 302 VNLPHDAYKLLPVPSPIGGVVVISANSIHYHSQSASCALALNNYAVSADNSQEMPRSSFS 361
Query: 1575 VELDSAHVTWISSDTALFSAKTGXXXXXXLVHEGRAVQRLELTASRSSTLASCICTVGDA 1396
VELD+A+ TW+S+D A+ S KTG L ++GR V RL+L+ SR+S L S I +G++
Sbjct: 362 VELDAANATWLSNDVAMLSTKTGELLLLTLAYDGRVVHRLDLSKSRASVLTSGIAAIGNS 421
Query: 1395 FFFLGSRLGDSLLVQFSCGIGSNTFSKSSKDEVSDFDVDTPS-KRLRRASSDISQDIMSG 1219
FFLGSRLGDSLLVQF+ + S S K+EV D + D PS KRLR++SSD QD+++G
Sbjct: 422 LFFLGSRLGDSLLVQFT-----SILSSSVKEEVGDIEGDVPSAKRLRKSSSDALQDMVNG 476
Query: 1218 EEAVPHNSTSGACDSSQPKAFLYTIRDLLINVGPLRDFAYGLRANADLKEAGAAKQRNFE 1039
EE + S + ++SQ K F +++RD INVGPL+DFAYGLR NAD K G AKQ N+E
Sbjct: 477 EELSLYGSAPNSTETSQ-KTFSFSVRDSFINVGPLKDFAYGLRINADPKATGIAKQSNYE 535
Query: 1038 LVACSGHGKNGSLCVFQQYIRPEQSTEVELEGCKGVWTVYHKXXXXXXXXXXEIVTEESE 859
LV CSGHGKNG+LC+ QQ IRPE TEVEL GCKG+WTVYHK ++ T++ E
Sbjct: 536 LVCCSGHGKNGALCILQQSIRPEMITEVELPGCKGIWTVYHKNTRGHNADSTKMATKDDE 595
Query: 858 YHAYIIFSFESQTRVLECADAIGEISSATEFFIKGPTISAGNLFSRRRIIQIYMGGLRLL 679
YHAY+I S ES+T VLE AD +GE++ + +++++G TISAGNLF RRR++Q+Y G R+L
Sbjct: 596 YHAYLIISLESRTMVLETADLLGEVTESVDYYVQGCTISAGNLFGRRRVVQVYARGARIL 655
Query: 678 DGQYMTQELLLGESIAACADGVVVTNATIIDPYALLMLSDGSLHLVVGDASTLTVSISSP 499
DG +MTQ+L + ES V + +I DPY LL +SDG++ L+VGD ST TVSI+ P
Sbjct: 656 DGAFMTQDLPISES-------STVLSVSIADPYVLLRMSDGNIQLLVGDPSTCTVSINIP 708
Query: 498 AIFQGSADSITACTLYLDKGPEPWLQKTSTDAWISTG---------AAAQD--DIYCVLC 352
A+F+ S SI+ACTLY DKGPEPWL+KTSTDAW+STG AAQD DIYCV+
Sbjct: 709 AVFESSKKSISACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIDGADGAAQDQGDIYCVVS 768
Query: 351 RESGRLDIFEIPSFTCVFSVTDFPSGKGILVDTYLADVMSGVQQ------SXXXXXXXXX 190
ESG L+IF++P+F CVFSV F SG LVDT + + Q+
Sbjct: 769 YESGDLEIFDVPNFNCVFSVDKFMSGNAHLVDTLILEPSEDTQKVMSKNSEEEADQGRKE 828
Query: 189 XXXXXXXXXVCMQKWNDQHGRPFLFAILNDGTVLCYHAYLYAGQDNALKTEMGSNGENVL 10
+ MQ+W+ QH RPFLF IL DGT+LCYHAYLY G ++ KTE + +N L
Sbjct: 829 NAHNIKVVELAMQRWSGQHSRPFLFGILTDGTILCYHAYLYEGPESTPKTEEAVSAQNSL 888
Query: 9 T 7
+
Sbjct: 889 S 889
Score = 90.5 bits (223), Expect(2) = 0.0
Identities = 53/128 (41%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Frame = -1
Query: 2675 MSYAAFKMIHEPTGVENCGVGFITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDAGA 2496
MSYAA+KM+H PTG+ENC GF+T DD +
Sbjct: 1 MSYAAYKMMHWPTGIENCASGFVTHSRADFAPQIAPIQT----------------DDLES 44
Query: 2495 P-PPKNWSAPLPNIVITKANIVEVYSLRLHEDIKRPLPLSSSSSVKRGNVMSGLSGAFLE 2319
P K PLPN+++T ANI+EVY +R+ ED R +S+ KRG VM+G+SGA LE
Sbjct: 45 EWPTKRQIGPLPNLIVTAANILEVYMVRVQEDDSR--ESRASAETKRGGVMAGISGAALE 102
Query: 2318 LACHLRLH 2295
L C RLH
Sbjct: 103 LVCQYRLH 110
>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
Length = 1448
Score = 831 bits (2147), Expect(2) = 0.0
Identities = 427/786 (54%), Positives = 544/786 (69%), Gaps = 24/786 (3%)
Frame = -3
Query: 2292 GNEDGCRKRDAIILSFRDAKISVLEFDDSTNALRISSMHYFEGPDWWHLKRGREKFARGP 2113
G D R+RD+IIL+F+DAKISVLEFDDS + LR SSMH FEGP+W+HLKRG E FARGP
Sbjct: 122 GGGDNSRRRDSIILAFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWFHLKRGHESFARGP 181
Query: 2112 LVKSDPQGRCGGVLLYESQVIILQAAEAGSG-VGDDETSVSRRTISAHIELSYAINLHEL 1936
LVK DPQGRC GVL+Y Q+IIL+A++AG G VGD+E S +SA +E SY I+L +L
Sbjct: 182 LVKVDPQGRCSGVLVYGLQMIILKASQAGYGLVGDEEALSSGSAVSARVESSYVISLRDL 241
Query: 1935 DMKHVKDFVFIYGYIEPVMVVLHEKEPTWAGSIAWKHHTCTISALSISMTSKQHPLIWSA 1756
DMKHVKDF F++GYIEPVMV+LHE+E TWAG ++WKHHTC ISALSIS T KQHPLIWSA
Sbjct: 242 DMKHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA 301
Query: 1755 NNLPHDAYKXXXXXXXXXXXXXXXXXXLQYHSQSSSCTLALNDFARTVDGRPEIPRANVD 1576
NLPHDAYK + YHSQS+SC LALN++A + D E+PR++
Sbjct: 302 VNLPHDAYKLLPVPSPIGGVVVISANSIHYHSQSASCALALNNYAVSADNSQEMPRSSFS 361
Query: 1575 VELDSAHVTWISSDTALFSAKTGXXXXXXLVHEGRAVQRLELTASRSSTLASCICTVGDA 1396
VELD+A+ TW+S+D A+ S KTG L ++GR V RL+L+ SR+S L S I +G++
Sbjct: 362 VELDAANATWLSNDVAMLSTKTGELLLLTLAYDGRVVHRLDLSKSRASVLTSGIAAIGNS 421
Query: 1395 FFFLGSRLGDSLLVQFSCGIGSNTFSKSSKDEVSDFDVDTPS-KRLRRASSDISQDIMSG 1219
FFLGSRLGDSLLVQF+ + S S K+EV D + D PS KRLR++SSD QD+++G
Sbjct: 422 LFFLGSRLGDSLLVQFT-----SILSSSVKEEVGDIEGDVPSAKRLRKSSSDALQDMVNG 476
Query: 1218 EEAVPHNSTSGACDSSQPKA-----FLYTIRDLLINVGPLRDFAYGLRANADLKEAGAAK 1054
EE + S + ++SQ +A F +++RD INVGPL+DFAYGLR NAD K G AK
Sbjct: 477 EELSLYGSAPNSTETSQVEAQVGKTFSFSVRDSFINVGPLKDFAYGLRINADPKATGIAK 536
Query: 1053 QRNFELVACSGHGKNGSLCVFQQYIRPEQSTEVELEGCKGVWTVYHKXXXXXXXXXXEIV 874
Q N+ELV CSGHGKNG+LC+ QQ IRPE TEVEL GCKG+WTVYHK ++
Sbjct: 537 QSNYELVCCSGHGKNGALCILQQSIRPEMITEVELPGCKGIWTVYHKNTRGHNADSTKMA 596
Query: 873 TEESEYHAYIIFSFESQTRVLECADAIGEISSATEFFIKGPTISAGNLFSRRRIIQIYMG 694
T++ EYHAY+I S ES+T VLE AD +GE++ + +++++G TISAGNLF RRR++Q+Y
Sbjct: 597 TKDDEYHAYLIISLESRTMVLETADLLGEVTESVDYYVQGCTISAGNLFGRRRVVQVYAR 656
Query: 693 GLRLLDGQYMTQELLLGESIAACADGVVVTNATIIDPYALLMLSDGSLHLVVGDASTLTV 514
G R+LDG +MTQ+L + ES V + +I DPY LL +SDG++ L+VGD ST TV
Sbjct: 657 GARILDGAFMTQDLPISES-------STVLSVSIADPYVLLRMSDGNIQLLVGDPSTCTV 709
Query: 513 SISSPAIFQGSADSITACTLYLDKGPEPWLQKTSTDAWISTG---------AAAQD--DI 367
SI+ PA+F+ S SI+ACTLY DKGPEPWL+KTSTDAW+STG AAQD DI
Sbjct: 710 SINIPAVFESSKKSISACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIDGADGAAQDQGDI 769
Query: 366 YCVLCRESGRLDIFEIPSFTCVFSVTDFPSGKGILVDTYLADVMSGVQQ------SXXXX 205
YCV+ ESG L+IF++P+F CVFSV F SG LVDT + + Q+
Sbjct: 770 YCVVSYESGDLEIFDVPNFNCVFSVDKFMSGNAHLVDTLILEPSEDTQKVMSKNSEEEAD 829
Query: 204 XXXXXXXXXXXXXXVCMQKWNDQHGRPFLFAILNDGTVLCYHAYLYAGQDNALKTEMGSN 25
+ MQ+W+ QH RPFLF IL DGT+LCYHAYLY G ++ KTE +
Sbjct: 830 QGRKENAHNIKVVELAMQRWSGQHSRPFLFGILTDGTILCYHAYLYEGPESTPKTEEAVS 889
Query: 24 GENVLT 7
+N L+
Sbjct: 890 AQNSLS 895
Score = 90.5 bits (223), Expect(2) = 0.0
Identities = 53/128 (41%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Frame = -1
Query: 2675 MSYAAFKMIHEPTGVENCGVGFITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDAGA 2496
MSYAA+KM+H PTG+ENC GF+T DD +
Sbjct: 1 MSYAAYKMMHWPTGIENCASGFVTHSRADFAPQIAPIQT----------------DDLES 44
Query: 2495 P-PPKNWSAPLPNIVITKANIVEVYSLRLHEDIKRPLPLSSSSSVKRGNVMSGLSGAFLE 2319
P K PLPN+++T ANI+EVY +R+ ED R +S+ KRG VM+G+SGA LE
Sbjct: 45 EWPTKRQIGPLPNLIVTAANILEVYMVRVQEDDSR--ESRASAETKRGGVMAGISGAALE 102
Query: 2318 LACHLRLH 2295
L C RLH
Sbjct: 103 LVCQYRLH 110
>gb|EOY22974.1| Cleavage and polyadenylation specificity factor 160 isoform 1
[Theobroma cacao]
Length = 1457
Score = 831 bits (2146), Expect(2) = 0.0
Identities = 415/774 (53%), Positives = 538/774 (69%), Gaps = 22/774 (2%)
Frame = -3
Query: 2292 GNEDGCRKRDAIILSFRDAKISVLEFDDSTNALRISSMHYFEGPDWWHLKRGREKFARGP 2113
G DG R+RD+IIL+F+DAKISVLEFDDS + LR +SMH FEGP+W HLKRGRE FARGP
Sbjct: 122 GGGDGSRRRDSIILAFKDAKISVLEFDDSIHGLRTTSMHCFEGPEWLHLKRGRESFARGP 181
Query: 2112 LVKSDPQGRCGGVLLYESQVIILQAAEAGSG-VGDDETSVSRRTISAHIELSYAINLHEL 1936
LVK DPQGRCGGVL+Y+ Q+IIL+A++AGSG VG+D+ S +SA +E SY INL +L
Sbjct: 182 LVKVDPQGRCGGVLVYDLQMIILKASQAGSGFVGEDDAFGSGGAVSARVESSYIINLRDL 241
Query: 1935 DMKHVKDFVFIYGYIEPVMVVLHEKEPTWAGSIAWKHHTCTISALSISMTSKQHPLIWSA 1756
D+KH+KDF+F++GYIEPVMV+LHE+E TWAG ++WKHHTC ISALSIS T KQHPLIWSA
Sbjct: 242 DVKHIKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSA 301
Query: 1755 NNLPHDAYKXXXXXXXXXXXXXXXXXXLQYHSQSSSCTLALNDFARTVDGRPEIPRANVD 1576
NLPHDAYK + YHSQS+SC LALN++A +VD ++PR+N
Sbjct: 302 VNLPHDAYKLLAVPSPIGGVLVISANTIHYHSQSASCALALNNYAISVDNSQDLPRSNFS 361
Query: 1575 VELDSAHVTWISSDTALFSAKTGXXXXXXLVHEGRAVQRLELTASRSSTLASCICTVGDA 1396
VELD+A+ TW+ +D AL S KTG L+++GR VQRL+L+ S++S L S I T+G++
Sbjct: 362 VELDAANATWLLNDVALLSTKTGELLLLTLIYDGRVVQRLDLSKSKASVLTSDITTIGNS 421
Query: 1395 FFFLGSRLGDSLLVQFSCGIGSNTFSKSSKDEVSDFDVDTP-SKRLRRASSDISQDIMSG 1219
FFLGSRLGDSLLVQFS G G + K+EV D + D P +KRLRR+SSD QD++ G
Sbjct: 422 LFFLGSRLGDSLLVQFSGGSGVSALPSGLKEEVGDIEGDVPLAKRLRRSSSDALQDMVGG 481
Query: 1218 EEAVPHNSTSGACDSSQPKAFLYTIRDLLINVGPLRDFAYGLRANADLKEAGAAKQRNFE 1039
EE + S +S+Q K FL+ +RD L NVGPL+DF+YGLR NAD+ G AKQ N+E
Sbjct: 482 EELSLYGSAPNNTESAQ-KTFLFAVRDSLTNVGPLKDFSYGLRINADVNATGIAKQSNYE 540
Query: 1038 LVACSGHGKNGSLCVFQQYIRPEQSTEVELEGCKGVWTVYHKXXXXXXXXXXEIVTEESE 859
LV CSGHGKNG+LCV +Q IRPE TEVEL GCKG+WTVYHK ++ ++ E
Sbjct: 541 LVCCSGHGKNGALCVLRQSIRPEMITEVELTGCKGIWTVYHKSTRSHSADLSKVTDDDDE 600
Query: 858 YHAYIIFSFESQTRVLECADAIGEISSATEFFIKGPTISAGNLFSRRRIIQIYMGGLRLL 679
YHAY+I S E++T VLE AD + E++ + +++++G TI+AGNLF RRR++Q+Y G R+L
Sbjct: 601 YHAYLIISLEARTMVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVVQVYERGARIL 660
Query: 678 DGQYMTQELLLGESIAACADG---VVVTNATIIDPYALLMLSDGSLHLVVGDASTLTVSI 508
DG +MTQEL + + + G V + +I DPY LL ++DGS+ L+VGD +T TVSI
Sbjct: 661 DGSFMTQELSIPSPNSESSPGSENSTVISVSIADPYVLLRMTDGSILLLVGDPATCTVSI 720
Query: 507 SSPAIFQGSADSITACTLYLDKGPEPWLQKTSTDAWISTGAAA-----------QDDIYC 361
++P F+GS ++ACTLY DKGPEPWL+K STDAW+STG Q DIYC
Sbjct: 721 NTPTAFEGSKKMVSACTLYHDKGPEPWLRKASTDAWLSTGVGESIDGADGGPHDQGDIYC 780
Query: 360 VLCRESGRLDIFEIPSFTCVFSVTDFPSGKGILVDTYL------ADVMSGVQQSXXXXXX 199
V+C ESG L+IF++P+F CVFS+ F SG+ LVD Y ++ +
Sbjct: 781 VVCYESGALEIFDVPNFNCVFSMEKFASGRTRLVDAYTLESSKDSEKVINKSSEELTGQG 840
Query: 198 XXXXXXXXXXXXVCMQKWNDQHGRPFLFAILNDGTVLCYHAYLYAGQDNALKTE 37
+ MQ+W+ H RPFLF IL DGT+LCYHAYL+ G +NA K E
Sbjct: 841 RKENVQNLKVVELAMQRWSANHSRPFLFGILTDGTILCYHAYLFEGSENASKVE 894
Score = 84.0 bits (206), Expect(2) = 0.0
Identities = 46/127 (36%), Positives = 67/127 (52%)
Frame = -1
Query: 2675 MSYAAFKMIHEPTGVENCGVGFITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDAGA 2496
MSYAA+KM+H PTG+ENC GF+T D
Sbjct: 1 MSYAAYKMMHWPTGIENCASGFVTHCRADFTPQIPLNQTE---------------DLESE 45
Query: 2495 PPPKNWSAPLPNIVITKANIVEVYSLRLHEDIKRPLPLSSSSSVKRGNVMSGLSGAFLEL 2316
P + P+PN+++T AN++E+Y +R+ E+ +R +S+ VKRG V+ G+SG LEL
Sbjct: 46 WPARRGIGPVPNLIVTAANLLEIYVVRVQEEGRREA--RNSTEVKRGGVLDGVSGVSLEL 103
Query: 2315 ACHLRLH 2295
C+ RLH
Sbjct: 104 VCNYRLH 110
>ref|XP_002318462.2| cleavage and polyadenylation specificity factor family protein
[Populus trichocarpa] gi|550326263|gb|EEE96682.2|
cleavage and polyadenylation specificity factor family
protein [Populus trichocarpa]
Length = 1455
Score = 818 bits (2112), Expect(2) = 0.0
Identities = 421/779 (54%), Positives = 538/779 (69%), Gaps = 23/779 (2%)
Frame = -3
Query: 2283 DGCRKRDAIILSFRDAKISVLEFDDSTNALRISSMHYFEGPDWWHLKRGREKFARGPLVK 2104
D R+RD+IIL+F+DAKISVLEFDDS + LR SSMH FEGPDW HLKRGRE FARGPLVK
Sbjct: 125 DDSRRRDSIILAFKDAKISVLEFDDSIHGLRTSSMHCFEGPDWRHLKRGRESFARGPLVK 184
Query: 2103 SDPQGRCGGVLLYESQVIILQAAEAGSGVGDDETSV-SRRTISAHIELSYAINLHELDMK 1927
DPQGRCGGVL+Y+ Q+IIL+AA+AGS + DE + S ISAHI SY INL +LDMK
Sbjct: 185 VDPQGRCGGVLVYDLQMIILKAAQAGSALVQDEDAFGSGAAISAHIASSYIINLRDLDMK 244
Query: 1926 HVKDFVFIYGYIEPVMVVLHEKEPTWAGSIAWKHHTCTISALSISMTSKQHPLIWSANNL 1747
HVKDF+F++ YIEPV+VVLHE+E TWAG + WKHHTC ISALSIS T KQ LIWS NL
Sbjct: 245 HVKDFIFVHDYIEPVVVVLHERELTWAGRVVWKHHTCMISALSISTTLKQPTLIWSIGNL 304
Query: 1746 PHDAYKXXXXXXXXXXXXXXXXXXLQYHSQSSSCTLALNDFARTVDGRPEIPRANVDVEL 1567
PHDAYK + YHS+S+SC LALN +A +VD E+PRA VEL
Sbjct: 305 PHDAYKLLAVPSPIGGVLVIGVNTIHYHSESASCALALNSYAASVDSSQELPRATFSVEL 364
Query: 1566 DSAHVTWISSDTALFSAKTGXXXXXXLVHEGRAVQRLELTASRSSTLASCICTVGDAFFF 1387
D+A+ TW+ D AL S KTG LV++GR VQRL+L+ S++S L S I T+G++FFF
Sbjct: 365 DAANATWLLKDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLTSDITTLGNSFFF 424
Query: 1386 LGSRLGDSLLVQFSCGIGSNTFSKSSKDEVSDFDVDTPS-KRLRRASSDISQDIMSGEEA 1210
LGSRLGDSLLVQF+ G+GS+ S K+EV D + D PS KRL+ +SSD QD++SGEE
Sbjct: 425 LGSRLGDSLLVQFTSGLGSSMLSPGLKEEVGDIEGDLPSAKRLKVSSSDALQDMVSGEEL 484
Query: 1209 VPHNSTSGACDSSQP----KAFLYTIRDLLINVGPLRDFAYGLRANADLKEAGAAKQRNF 1042
++S +SSQ K F +T+RD LINVGPL+DFAYGLR NAD G +KQ N+
Sbjct: 485 SLYSSAPNNAESSQVVSVIKTFSFTVRDSLINVGPLKDFAYGLRINADANATGISKQSNY 544
Query: 1041 ELVACSGHGKNGSLCVFQQYIRPEQSTEVELEGCKGVWTVYHKXXXXXXXXXXEIVTEES 862
ELV CSGHGKNG+LCV QQ IRPE TEVEL GCKG+WTVYHK ++ +++
Sbjct: 545 ELVCCSGHGKNGALCVLQQSIRPEMITEVELPGCKGIWTVYHKNARSHSVDSLKMASDD- 603
Query: 861 EYHAYIIFSFESQTRVLECADAIGEISSATEFFIKGPTISAGNLFSRRRIIQIYMGGLRL 682
EYHAY+I S E++T VLE AD + E++ + ++F++G TI+AGNLF RRR++Q++ G R+
Sbjct: 604 EYHAYLIISMEARTMVLETADHLTEVTESVDYFVQGRTIAAGNLFGRRRVVQVFERGARI 663
Query: 681 LDGQYMTQELLLG--ESIAACADGVVVTNATIIDPYALLMLSDGSLHLVVGDASTLTVSI 508
LDG +MTQ+L G S ++ V + +I+DPY L+ ++DGS+ ++VGD S TVS+
Sbjct: 664 LDGSFMTQDLSFGGSNSETGRSESSTVMHVSIVDPYVLVRMADGSIQILVGDPSACTVSV 723
Query: 507 SSPAIFQGSADSITACTLYLDKGPEPWLQKTSTDAWIST-----------GAAAQDDIYC 361
++P+ FQ S S++ACTLY DKGPEPWL+KTSTDAW+ST GA Q DIYC
Sbjct: 724 NTPSAFQSSTKSVSACTLYHDKGPEPWLRKTSTDAWLSTGISEAIDGADSGAHEQGDIYC 783
Query: 360 VLCRESGRLDIFEIPSFTCVFSVTDFPSGKGILVDTYLA----DVMSGVQQSXXXXXXXX 193
V+C E+G L+IF++P+F VF V F SGK L+DT D+M GV++
Sbjct: 784 VVCYETGALEIFDVPNFNSVFFVDKFVSGKTHLLDTCTGEPAKDMMKGVKEE-VAGAGRK 842
Query: 192 XXXXXXXXXXVCMQKWNDQHGRPFLFAILNDGTVLCYHAYLYAGQDNALKTEMGSNGEN 16
+ M +W+ +H RPFLF IL DGT+LCYHAYL+ G D K E + +N
Sbjct: 843 ESTQNMKVVELTMLRWSGRHSRPFLFGILTDGTILCYHAYLFEGPDGTSKLEDSVSAQN 901
Score = 72.0 bits (175), Expect(2) = 0.0
Identities = 44/132 (33%), Positives = 62/132 (46%), Gaps = 5/132 (3%)
Frame = -1
Query: 2675 MSYAAFKMIHEPTGVENCGVGFITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDAGA 2496
MSYAA+KM+H PT ++ C GF+T DD +
Sbjct: 1 MSYAAYKMMHWPTTIDTCVSGFVTHSRSESAHLPQLHT-----------------DDLDS 43
Query: 2495 PPPKNWS-----APLPNIVITKANIVEVYSLRLHEDIKRPLPLSSSSSVKRGNVMSGLSG 2331
P P PN+++ N++E+Y +R+ E+ R SS +KRG VM G++G
Sbjct: 44 DWPSRRRHGGGIGPTPNLIVASGNVLELYVVRVQEEGAR-----SSGELKRGGVMDGVAG 98
Query: 2330 AFLELACHLRLH 2295
A LEL CH RLH
Sbjct: 99 ASLELVCHYRLH 110
>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
[Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
and polyadenylation specificity factor cpsf, putative
[Ricinus communis]
Length = 1461
Score = 798 bits (2062), Expect(2) = 0.0
Identities = 399/781 (51%), Positives = 536/781 (68%), Gaps = 25/781 (3%)
Frame = -3
Query: 2283 DGCRKRDAIILSFRDAKISVLEFDDSTNALRISSMHYFEGPDWWHLKRGREKFARGPLVK 2104
D R+RD+IIL+F+DAKISVLEFDDS + LR SSMH FEGP+W HLKRGRE FARGPL+K
Sbjct: 126 DSSRRRDSIILAFKDAKISVLEFDDSIHGLRTSSMHCFEGPEWLHLKRGRESFARGPLLK 185
Query: 2103 SDPQGRCGGVLLYESQVIILQAAEAGSG-VGDDETSVSRRTISAHIELSYAINLHELDMK 1927
DPQGRCGG+L+Y+ Q+IIL+AA+A SG VGDD+ S +ISA ++ SY INL ++DMK
Sbjct: 186 VDPQGRCGGILVYDMQMIILRAAQASSGLVGDDDALSSGGSISARVQSSYVINLRDMDMK 245
Query: 1926 HVKDFVFIYGYIEPVMVVLHEKEPTWAGSIAWKHHTCTISALSISMTSKQHPLIWSANNL 1747
HVKDF+F++ YIEPV+V+LHE+E TWAG ++WKHHTC ISALSIS T KQ LIWS NL
Sbjct: 246 HVKDFIFLHDYIEPVVVILHERELTWAGRVSWKHHTCMISALSISTTLKQPTLIWSVVNL 305
Query: 1746 PHDAYKXXXXXXXXXXXXXXXXXXLQYHSQSSSCTLALNDFARTVDGRPEIPRANVDVEL 1567
PHDAYK + YHS+S++ LALN++A ++D E+PRA+ VEL
Sbjct: 306 PHDAYKLLAVPPPIGGVLVICANTIHYHSESATYALALNNYAVSIDSSQELPRASFSVEL 365
Query: 1566 DSAHVTWISSDTALFSAKTGXXXXXXLVHEGRAVQRLELTASRSSTLASCICTVGDAFFF 1387
D+ W+ +D AL SAK G LV++GR VQRL+L+ S++S L S I T+G++ FF
Sbjct: 366 DAVKAAWLLNDVALLSAKNGELLLLSLVYDGRVVQRLDLSKSKASVLTSDITTIGNSLFF 425
Query: 1386 LGSRLGDSLLVQFSCGIGSNTFSKSSKDEVSDFDVDTPS-KRLRRASSDISQDIMSGEEA 1210
LGSRLGDSLLVQF+ G+G + S K+EV + + D PS KRL+R++SD QD++SGEE
Sbjct: 426 LGSRLGDSLLVQFTNGLGPSVVSSGLKEEVGEIEGDVPSAKRLKRSASDGLQDMVSGEEL 485
Query: 1209 VPHNSTSGACDSSQPKAFLYTIRDLLINVGPLRDFAYGLRANADLKEAGAAKQRNFELVA 1030
+ ST+ +S+Q K+F + +RD LINVGPL+DF+YGLR+N D G AKQ N++LV
Sbjct: 486 SLYGSTANNTESAQ-KSFSFAVRDSLINVGPLKDFSYGLRSNYDASATGIAKQSNYDLVC 544
Query: 1029 CSGHGKNGSLCVFQQYIRPEQSTEVELEGCKGVWTVYHKXXXXXXXXXXEIVTEESEYHA 850
CSGHGKNG+LC+ +Q IRPE TEV+L GC+G+WTVYHK ++ EYHA
Sbjct: 545 CSGHGKNGTLCILRQSIRPEMITEVDLPGCRGIWTVYHKNARGHNVDLSKMAAAADEYHA 604
Query: 849 YIIFSFESQTRVLECADAIGEISSATEFFIKGPTISAGNLFSRRRIIQIYMGGLRLLDGQ 670
Y+I S E++T VLE AD + E++ + ++F++G TI+AGNLF RRR+IQ++ G R+LDG
Sbjct: 605 YLIISMEARTMVLETADLLSEVTESVDYFVQGRTIAAGNLFGRRRVIQVFERGARILDGS 664
Query: 669 YMTQELLLGESIAACADG---VVVTNATIIDPYALLMLSDGSLHLVVGDASTLTVSISSP 499
+MTQ+L +G S + + G V++ +I DPY L+ ++DGS+ L++GD+ST VSI++P
Sbjct: 665 FMTQDLSIGSSNSESSPGSESATVSSVSIADPYVLIKMTDGSIRLLIGDSSTCMVSINTP 724
Query: 498 AIFQGSADSITACTLYLDKGPEPWLQKTSTDAWISTGAAA--------------QDDIYC 361
+ F+ S S++ACTLY DKGPEPWL+K STDAW+STG + Q DIYC
Sbjct: 725 SAFENSERSVSACTLYHDKGPEPWLRKASTDAWLSTGVSEAIDGAESADGGPHDQGDIYC 784
Query: 360 VLCRESGRLDIFEIPSFTCVFSVTDFPSGKGILVDTYLADVMSGVQQ------SXXXXXX 199
++C ESG L+IF++P+F VFSV F SGK L D Y+ + Q+
Sbjct: 785 IVCYESGALEIFDVPNFNRVFSVDKFVSGKTHLADAYVREPPKDSQEKTNRISEEVAGLG 844
Query: 198 XXXXXXXXXXXXVCMQKWNDQHGRPFLFAILNDGTVLCYHAYLYAGQDNALKTEMGSNGE 19
+ MQ+W+ H RPFLF +L DGT+LCYHAYL+ D KTE + +
Sbjct: 845 RKENAHNMKAVELAMQRWSGHHSRPFLFGVLTDGTILCYHAYLFEAPDATSKTEDSVSAQ 904
Query: 18 N 16
N
Sbjct: 905 N 905
Score = 90.1 bits (222), Expect(2) = 0.0
Identities = 50/134 (37%), Positives = 70/134 (52%)
Frame = -1
Query: 2675 MSYAAFKMIHEPTGVENCGVGFITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDAGA 2496
MSYAA+KM+H PTG+E+C G+IT D+
Sbjct: 1 MSYAAYKMLHWPTGIESCASGYITHSRADFVPQIPPIQTDNL--------------DSEW 46
Query: 2495 PPPKNWSAPLPNIVITKANIVEVYSLRLHEDIKRPLPLSSSSSVKRGNVMSGLSGAFLEL 2316
PP K P+PN+++T +++EVY +R+ ED R SS KRG +M G+SGA LEL
Sbjct: 47 PPSKRGIGPMPNLIVTAGSVLEVYVVRVQEDGSRES--RSSRETKRGGLMDGVSGASLEL 104
Query: 2315 ACHLRLHQEMKMVV 2274
CH RLH ++ +V
Sbjct: 105 VCHYRLHGNVESMV 118
>ref|XP_006348057.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Solanum tuberosum]
Length = 1447
Score = 813 bits (2099), Expect(2) = 0.0
Identities = 400/787 (50%), Positives = 540/787 (68%), Gaps = 22/787 (2%)
Frame = -3
Query: 2301 VTPGNEDGCRKRDAIILSFRDAKISVLEFDDSTNALRISSMHYFEGPDWWHLKRGREKFA 2122
+T G DG ++RD+IILSF DAK+SVLEFDD+T+ LR SSMH+FEGPDW HLKRGRE F
Sbjct: 114 ITAGGADGGKRRDSIILSFEDAKMSVLEFDDATHGLRTSSMHFFEGPDWLHLKRGRESFD 173
Query: 2121 RGPLVKSDPQGRCGGVLLYESQVIILQAAEAGSGVGDDETSVSRRTISAHIELSYAINLH 1942
+GP++K DPQGRC GV +E Q+I+L+AAE S + ++++ S SA IE SY I L
Sbjct: 174 KGPIIKVDPQGRCAGVFAFEQQMIVLKAAEVNSSLAGEDSAFSAGGASARIESSYIITLR 233
Query: 1941 ELDMKHVKDFVFIYGYIEPVMVVLHEKEPTWAGSIAWKHHTCTISALSISMTSKQHPLIW 1762
+LD++HVKDF F++GYIEPVMV+LHE+E TW+G ++WKHHTC +SA SIS T KQHPLIW
Sbjct: 234 DLDVRHVKDFTFLHGYIEPVMVILHERELTWSGRVSWKHHTCMVSAFSISTTLKQHPLIW 293
Query: 1761 SANNLPHDAYKXXXXXXXXXXXXXXXXXXLQYHSQSSSCTLALNDFARTVDGRPEIPRAN 1582
SA NLPHDAYK + YHSQSSSC+LALN+FA D E+PR++
Sbjct: 294 SAANLPHDAYKLLAVPSPIGGVLVIGANTIHYHSQSSSCSLALNNFAFFGDNSQEMPRSS 353
Query: 1581 VDVELDSAHVTWISSDTALFSAKTGXXXXXXLVHEGRAVQRLELTASRSSTLASCICTVG 1402
+VELD+A+ TW++SD A+ S KTG ++++GR VQ+L+L+ SR+S L S I T+G
Sbjct: 354 FNVELDAANATWLTSDVAMLSTKTGELLLLTIIYDGRIVQKLDLSKSRASVLTSGITTIG 413
Query: 1401 DAFFFLGSRLGDSLLVQFSCGIGSNTFSKSSKDEVSDFDVDTPS-KRLRRASSDISQDIM 1225
D+ FFLGSRLGDSLLVQFSCG+G + ++EV D + D PS KRLR +SSD QD++
Sbjct: 414 DSLFFLGSRLGDSLLVQFSCGLGGSNLPPGVQEEVGDIESDAPSAKRLRMSSSDALQDMI 473
Query: 1224 SGEEAVPHNSTSGACDSSQPKAFLYTIRDLLINVGPLRDFAYGLRANADLKEAGAAKQRN 1045
+GEE + + S+Q K F + +RD LINVGPL+DF+YG+R NADL G AKQ N
Sbjct: 474 NGEELSLYGTAPNNAQSAQ-KTFSFAVRDSLINVGPLKDFSYGMRINADLNATGIAKQSN 532
Query: 1044 FELVACSGHGKNGSLCVFQQYIRPEQSTEVELEGCKGVWTVYHKXXXXXXXXXXEIVTEE 865
+ELV CSGHGKNGSLCV QQ IRPE T+ L GCKG+WTVYHK + EE
Sbjct: 533 YELVCCSGHGKNGSLCVLQQSIRPETITQEALPGCKGIWTVYHKNTRIHLSESSRMADEE 592
Query: 864 SEYHAYIIFSFESQTRVLECADAIGEISSATEFFIKGPTISAGNLFSRRRIIQIYMGGLR 685
EYHAY+I S E++T VL+ A+ + E++ +++++G T++AGNLF RRR+IQ++ G R
Sbjct: 593 DEYHAYLIISLEARTMVLQTANNLEEVTENVDYYVQGTTLAAGNLFGRRRVIQVFAHGAR 652
Query: 684 LLDGQYMTQELLLGES---IAACADGVVVTNATIIDPYALLMLSDGSLHLVVGDASTLTV 514
+LDG +MTQEL S + +D +V + +I DPY LL +++GSL L+VGD S+ +V
Sbjct: 653 ILDGAFMTQELSFKASNVESGSSSDTSIVASVSIADPYVLLRMTNGSLQLLVGDPSSCSV 712
Query: 513 SISSPAIFQGSADSITACTLYLDKGPEPWLQKTSTDAWISTGAAA-----------QDDI 367
S++ P++F+ S SI+ACTLY DKGPEPWL+KTSTDAW+S+G Q D+
Sbjct: 713 SLTVPSVFESSKKSISACTLYHDKGPEPWLRKTSTDAWLSSGMGEAIDGADGVTQDQGDV 772
Query: 366 YCVLCRESGRLDIFEIPSFTCVFSVTDFPSGKGILVDTYLADVMSGV-------QQSXXX 208
YCV+C E+G L+IF++P+FTCVFSV F SG+ LVDT++ D ++G+ +
Sbjct: 773 YCVVCYENGTLEIFDVPNFTCVFSVDKFISGRTYLVDTFMQDSVNGLHAHSKNTEDVIRP 832
Query: 207 XXXXXXXXXXXXXXXVCMQKWNDQHGRPFLFAILNDGTVLCYHAYLYAGQDNALKTEMGS 28
+ M +W +H RPFLF IL DGT+L YHAY++ G +N+ K E
Sbjct: 833 GQKENSKDVKINVVELMMHRWIGKHSRPFLFGILADGTILSYHAYVFEGSENSSKVEGSV 892
Query: 27 NGENVLT 7
+ +N ++
Sbjct: 893 SSQNSIS 899
Score = 70.1 bits (170), Expect(2) = 0.0
Identities = 44/127 (34%), Positives = 62/127 (48%)
Frame = -1
Query: 2675 MSYAAFKMIHEPTGVENCGVGFITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDAGA 2496
MS+AA K +H PTG+ENC GFIT D+
Sbjct: 1 MSFAACKTMHCPTGIENCASGFITHSAAEITPQIRTADV-----------------DSDW 43
Query: 2495 PPPKNWSAPLPNIVITKANIVEVYSLRLHEDIKRPLPLSSSSSVKRGNVMSGLSGAFLEL 2316
P K P+PN+V++ N++EVY +R+ + R ++ VKRG +M+G+S A LEL
Sbjct: 44 PATKP-VGPMPNLVVSAGNVLEVYLIRIEQASSR----DAAEVVKRGGLMAGISAASLEL 98
Query: 2315 ACHLRLH 2295
C RLH
Sbjct: 99 VCTYRLH 105
>ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X1 [Glycine max]
Length = 1449
Score = 853 bits (2203), Expect = 0.0
Identities = 428/791 (54%), Positives = 554/791 (70%), Gaps = 18/791 (2%)
Frame = -3
Query: 2355 QCHVRSQRRVLRTCLSSQVTPGNEDGCRKRDAIILSFRDAKISVLEFDDSTNALRISSMH 2176
+CH R V + S G D RKRD+IIL+F DAKISVLE+DDS + LR SS+H
Sbjct: 102 ECHYRLHGNVETMAVLSI---GGGDVSRKRDSIILTFADAKISVLEYDDSIHGLRTSSLH 158
Query: 2175 YFEGPDWWHLKRGREKFARGPLVKSDPQGRCGGVLLYESQVIILQAAEAGSG-VGDDETS 1999
FEGP+W HLKRGRE+FARGP+VK DPQGRCGGVL+Y+ Q+IIL+A + GSG VGDD+
Sbjct: 159 CFEGPEWLHLKRGREQFARGPVVKIDPQGRCGGVLIYDLQMIILKATQVGSGLVGDDDAF 218
Query: 1998 VSRRTISAHIELSYAINLHELDMKHVKDFVFIYGYIEPVMVVLHEKEPTWAGSIAWKHHT 1819
S ++A IE SY INL +LDM+HVKDF F+YGYIEPVMV+LHE+E TWAG ++W HHT
Sbjct: 219 GSSGAVAARIESSYMINLRDLDMRHVKDFTFVYGYIEPVMVILHERELTWAGRVSWTHHT 278
Query: 1818 CTISALSISMTSKQHPLIWSANNLPHDAYKXXXXXXXXXXXXXXXXXXLQYHSQSSSCTL 1639
C ISALSIS T KQHPLIWSA NLPHDAYK + YHSQS+SC L
Sbjct: 279 CMISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGANTIHYHSQSASCAL 338
Query: 1638 ALNDFARTVDGRPEIPRANVDVELDSAHVTWISSDTALFSAKTGXXXXXXLVHEGRAVQR 1459
ALN++A T+D EIPR++ +VELD+A+ TW+ SD AL S KTG LV++GR VQR
Sbjct: 339 ALNNYAVTLDSSQEIPRSSFNVELDAANATWLLSDVALLSTKTGELLLLMLVYDGRVVQR 398
Query: 1458 LELTASRSSTLASCICTVGDAFFFLGSRLGDSLLVQFSCGIGSNTFSKSSKDEVSDFDVD 1279
L+L+ S++S L+S I T+G++ FFL SRLGDS+LVQFSCG G + S + K+EV D +VD
Sbjct: 399 LDLSKSKASVLSSGITTIGNSLFFLASRLGDSMLVQFSCGSGVSMMSSNLKEEVGDIEVD 458
Query: 1278 TPSKRLRRASSDISQDIMSGEEAVPHNSTSGACDSSQPKAFLYTIRDLLINVGPLRDFAY 1099
PSKRLRR+ SD QD++SGEE + S + +S+Q K+F + +RD LINVGPL+DF+Y
Sbjct: 459 APSKRLRRSPSDALQDMVSGEELSLYGSATNRTESAQ-KSFSFAVRDSLINVGPLKDFSY 517
Query: 1098 GLRANADLKEAGAAKQRNFELVACSGHGKNGSLCVFQQYIRPEQSTEVELEGCKGVWTVY 919
GLR NAD G AKQ N+ELV CSGHGKNGSLCV +Q IRPE TEVEL GCKG+WTVY
Sbjct: 518 GLRINADANATGIAKQSNYELVCCSGHGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVY 577
Query: 918 HKXXXXXXXXXXEIVTEESEYHAYIIFSFESQTRVLECADAIGEISSATEFFIKGPTISA 739
HK ++ ++ EYHAY+I S E++T VLE AD + E++ + +++++G T++A
Sbjct: 578 HKSTRSHNADSSKMADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAA 637
Query: 738 GNLFSRRRIIQIYMGGLRLLDGQYMTQELLLGES---IAACADGVVVTNATIIDPYALLM 568
GNLF RRR+IQ+Y G R+LDG +MTQ++ G S + ++ + + +I DP+ LL
Sbjct: 638 GNLFGRRRVIQVYERGARILDGSFMTQDVSFGASNSESGSASESAIALSVSIADPFVLLR 697
Query: 567 LSDGSLHLVVGDASTLTVSISSPAIFQGSADSITACTLYLDKGPEPWLQKTSTDAWISTG 388
+SDGS+ L++GD ST T+S++SPA F+ S S+++CTLY DKGPEPWL+KTSTDAW+STG
Sbjct: 698 MSDGSIRLLIGDPSTCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTG 757
Query: 387 ---------AAAQD--DIYCVLCRESGRLDIFEIPSFTCVFSVTDFPSGKGILVDTYLAD 241
AAQD DIYCV+C ++G L+IF+IP+F CVFSV +F SGK LVD + +
Sbjct: 758 VGEAIDGTDGAAQDHGDIYCVVCFDNGNLEIFDIPNFNCVFSVENFMSGKSHLVDALMKE 817
Query: 240 VMSGVQQ---SXXXXXXXXXXXXXXXXXXVCMQKWNDQHGRPFLFAILNDGTVLCYHAYL 70
V+ +Q + MQ+W+ QH RPFLF IL+DGT+LCYHAYL
Sbjct: 818 VLKDSKQGDRDGVVNQGRKDNIPNMKVVELAMQRWSGQHSRPFLFGILSDGTILCYHAYL 877
Query: 69 YAGQDNALKTE 37
Y D K E
Sbjct: 878 YESPDGTSKVE 888
Score = 84.7 bits (208), Expect = 2e-13
Identities = 48/129 (37%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
Frame = -1
Query: 2675 MSYAAFKMIHEPTGVENCGVGFITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDAGA 2496
MS+AA+KM+ PTG++NC GF+T DA
Sbjct: 1 MSFAAYKMMQCPTGIDNCAAGFLTHSRSDFVPLQPDDL------------------DAAE 42
Query: 2495 PP--PKNWSAPLPNIVITKANIVEVYSLRLHEDIKRPLPLSSSSSVKRGNVMSGLSGAFL 2322
P P++ PLPN+V+T AN++EVY++RL ED + P +S +RG ++ G++GA L
Sbjct: 43 WPSRPRHHVGPLPNLVVTAANVLEVYAVRLQEDQQ---PKDASDDSRRGTLLDGIAGASL 99
Query: 2321 ELACHLRLH 2295
EL CH RLH
Sbjct: 100 ELECHYRLH 108
>ref|XP_004234158.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Solanum lycopersicum]
Length = 1447
Score = 810 bits (2091), Expect(2) = 0.0
Identities = 398/787 (50%), Positives = 540/787 (68%), Gaps = 22/787 (2%)
Frame = -3
Query: 2301 VTPGNEDGCRKRDAIILSFRDAKISVLEFDDSTNALRISSMHYFEGPDWWHLKRGREKFA 2122
+T G DG ++RD+IILSF DAK+SVLEFDD+T+ LR SSMH+FEGPDW+HLKRGRE F
Sbjct: 114 ITAGGADGGKRRDSIILSFEDAKMSVLEFDDATHGLRTSSMHFFEGPDWFHLKRGRESFD 173
Query: 2121 RGPLVKSDPQGRCGGVLLYESQVIILQAAEAGSGVGDDETSVSRRTISAHIELSYAINLH 1942
+GP++K DPQGRC GV +E Q+I+L+AAE S + ++++ S SA IE SY I L
Sbjct: 174 KGPIIKVDPQGRCAGVFAFEQQMIVLKAAEVNSSLAGEDSAFSAGGASARIESSYIITLR 233
Query: 1941 ELDMKHVKDFVFIYGYIEPVMVVLHEKEPTWAGSIAWKHHTCTISALSISMTSKQHPLIW 1762
+LD++HVKDF F++GYIEPVMV+LHE+E TW+G ++WKHHTC +SA SIS T KQHPLIW
Sbjct: 234 DLDVRHVKDFTFLHGYIEPVMVILHERELTWSGRVSWKHHTCMVSAFSISTTLKQHPLIW 293
Query: 1761 SANNLPHDAYKXXXXXXXXXXXXXXXXXXLQYHSQSSSCTLALNDFARTVDGRPEIPRAN 1582
SA NLPHDAYK + YHSQSSSC+LALN+F D E+PR++
Sbjct: 294 SATNLPHDAYKLLAVPSPIGGVLVIGANTIHYHSQSSSCSLALNNFVFFGDNSQEMPRSS 353
Query: 1581 VDVELDSAHVTWISSDTALFSAKTGXXXXXXLVHEGRAVQRLELTASRSSTLASCICTVG 1402
++VELD+A+ TW++SD A+ S KTG ++++GR VQ+L+L+ SR+S L S I T+G
Sbjct: 354 INVELDAANATWLTSDVAMLSTKTGELLLLTIIYDGRIVQKLDLSKSRASVLTSGITTIG 413
Query: 1401 DAFFFLGSRLGDSLLVQFSCGIGSNTFSKSSKDEVSDFDVDTPS-KRLRRASSDISQDIM 1225
D+ FFLGSRLGDSLLVQFS G+G + ++EV D + D PS KRLR +SSD QD++
Sbjct: 414 DSLFFLGSRLGDSLLVQFSSGLGGSNLPPGVQEEVGDIESDAPSAKRLRMSSSDALQDMI 473
Query: 1224 SGEEAVPHNSTSGACDSSQPKAFLYTIRDLLINVGPLRDFAYGLRANADLKEAGAAKQRN 1045
+GEE + + S+Q K F + +RD LINVGPL+DF+YG+R NADL G AKQ N
Sbjct: 474 NGEELSLYGTAPNNAQSAQ-KTFSFAVRDSLINVGPLKDFSYGMRINADLNATGIAKQSN 532
Query: 1044 FELVACSGHGKNGSLCVFQQYIRPEQSTEVELEGCKGVWTVYHKXXXXXXXXXXEIVTEE 865
+ELV CSGHGKNGSL V QQ IRPE T+V L GCKG+WTVYHK + EE
Sbjct: 533 YELVCCSGHGKNGSLSVLQQSIRPETITQVSLPGCKGIWTVYHKNTRIHLSESSRMADEE 592
Query: 864 SEYHAYIIFSFESQTRVLECADAIGEISSATEFFIKGPTISAGNLFSRRRIIQIYMGGLR 685
EYHAY+I S E++T VL+ A+ + E++ +++++G T++AGNLF RRR+IQ++ G R
Sbjct: 593 DEYHAYLIISLEARTMVLQTANNLEEVTENVDYYVQGTTLAAGNLFGRRRVIQVFAHGAR 652
Query: 684 LLDGQYMTQELLLGES---IAACADGVVVTNATIIDPYALLMLSDGSLHLVVGDASTLTV 514
+LDG +MTQEL S + +D +V + +I DPY LL +++GSL L+VGD S+ +V
Sbjct: 653 ILDGAFMTQELSFKASNVESGSSSDTSIVASVSIADPYVLLRMTNGSLQLLVGDPSSCSV 712
Query: 513 SISSPAIFQGSADSITACTLYLDKGPEPWLQKTSTDAWISTGAAA-----------QDDI 367
S++ P++F+ S SI+ACTLY DKGPEPWL+KTSTDAW+S+G Q D+
Sbjct: 713 SLTVPSVFESSKKSISACTLYHDKGPEPWLRKTSTDAWLSSGMGEAIDGADGVIQDQGDV 772
Query: 366 YCVLCRESGRLDIFEIPSFTCVFSVTDFPSGKGILVDTYLADVMSGV-------QQSXXX 208
YCV+C E+G L+IF++PSFTCVFSV F SG+ LVDT++ D ++G+ +
Sbjct: 773 YCVVCYENGTLEIFDVPSFTCVFSVDKFISGRTYLVDTFMQDSVNGLHAHSKNTEDVIRP 832
Query: 207 XXXXXXXXXXXXXXXVCMQKWNDQHGRPFLFAILNDGTVLCYHAYLYAGQDNALKTEMGS 28
+ M +W +H RPFLF IL DGT+L YHAY++ G +N+ K +
Sbjct: 833 GQKENSKDVKINVVELMMHRWIGKHSRPFLFGILADGTILSYHAYVFEGSENSSKVDGSV 892
Query: 27 NGENVLT 7
+ +N ++
Sbjct: 893 SSQNSIS 899
Score = 66.6 bits (161), Expect(2) = 0.0
Identities = 42/127 (33%), Positives = 62/127 (48%)
Frame = -1
Query: 2675 MSYAAFKMIHEPTGVENCGVGFITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDAGA 2496
MS+AA K +H PTG+ENC GFIT D+
Sbjct: 1 MSFAACKTMHCPTGIENCASGFITHSAADITPQIQTADV-----------------DSDW 43
Query: 2495 PPPKNWSAPLPNIVITKANIVEVYSLRLHEDIKRPLPLSSSSSVKRGNVMSGLSGAFLEL 2316
P K P+PN+V++ N+++VY +R+ + R ++ VKRG +++G+S A LEL
Sbjct: 44 PATKP-IGPVPNLVVSAGNVLDVYLIRVEQASSR----DAAEVVKRGGLVAGISAASLEL 98
Query: 2315 ACHLRLH 2295
C RLH
Sbjct: 99 VCTYRLH 105
>gb|ESW24391.1| hypothetical protein PHAVU_004G126600g [Phaseolus vulgaris]
Length = 1445
Score = 846 bits (2185), Expect = 0.0
Identities = 423/790 (53%), Positives = 550/790 (69%), Gaps = 18/790 (2%)
Frame = -3
Query: 2352 CHVRSQRRVLRTCLSSQVTPGNEDGCRKRDAIILSFRDAKISVLEFDDSTNALRISSMHY 2173
CH R V + S G D RKRD+IIL+F DAKISVLE+DDS + LR SS+H
Sbjct: 99 CHYRLHGNVETMAVLSI---GGGDASRKRDSIILTFADAKISVLEYDDSIHGLRTSSLHC 155
Query: 2172 FEGPDWWHLKRGREKFARGPLVKSDPQGRCGGVLLYESQVIILQAAEAGSG-VGDDETSV 1996
FEGP+W HLKRGRE+FARGP+VK DPQGRCGG L+Y+ Q+IIL+A +AGSG VGDD+
Sbjct: 156 FEGPEWLHLKRGREQFARGPVVKVDPQGRCGGTLIYDLQMIILKATQAGSGLVGDDDALG 215
Query: 1995 SRRTISAHIELSYAINLHELDMKHVKDFVFIYGYIEPVMVVLHEKEPTWAGSIAWKHHTC 1816
++A IE SY INL +LDM+HVKDF F++GYIEPVMV+LHE+E TWAG ++WKHHTC
Sbjct: 216 FSGAVAARIESSYMINLRDLDMRHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTC 275
Query: 1815 TISALSISMTSKQHPLIWSANNLPHDAYKXXXXXXXXXXXXXXXXXXLQYHSQSSSCTLA 1636
ISALSIS T KQHPLIWSA NLPHDAYK + YHSQS+SC LA
Sbjct: 276 MISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGANTVHYHSQSASCALA 335
Query: 1635 LNDFARTVDGRPEIPRANVDVELDSAHVTWISSDTALFSAKTGXXXXXXLVHEGRAVQRL 1456
LN +A ++D EIPR++ +VELDSA+ TW+ SD AL S KTG LV++GR VQRL
Sbjct: 336 LNSYAVSLDNSQEIPRSSFNVELDSANATWLLSDVALLSTKTGELLLLTLVYDGRVVQRL 395
Query: 1455 ELTASRSSTLASCICTVGDAFFFLGSRLGDSLLVQFSCGIGSNTFSKSSKDEVSDFDVDT 1276
+L+ S++S L+S I T+G++ FFL SRLGDS+LVQFSCG G + S + K+EV D + D
Sbjct: 396 DLSKSKASVLSSGITTIGNSLFFLASRLGDSMLVQFSCGSGGSMLSSNLKEEVGDIEADA 455
Query: 1275 PSKRLRRASSDISQDIMSGEEAVPHNSTSGACDSSQPKAFLYTIRDLLINVGPLRDFAYG 1096
PSKRLRR+ SD QD++SGEE + S +S+Q K+F + +RD LINVGPL+DF+YG
Sbjct: 456 PSKRLRRSPSDTLQDVVSGEELSLYGSAPNRTESAQ-KSFSFAVRDSLINVGPLKDFSYG 514
Query: 1095 LRANADLKEAGAAKQRNFELVACSGHGKNGSLCVFQQYIRPEQSTEVELEGCKGVWTVYH 916
LR NAD G AKQ N+ELV CSGHGKNGSLCV +Q IRPE TEVEL GCKG+WTVYH
Sbjct: 515 LRINADANATGIAKQSNYELVCCSGHGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVYH 574
Query: 915 KXXXXXXXXXXEIVTEESEYHAYIIFSFESQTRVLECADAIGEISSATEFFIKGPTISAG 736
K ++ ++ EYHAY+I S E++T VLE AD + E++ + +++++G T++AG
Sbjct: 575 KSTRSHNTDSSKLADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAG 634
Query: 735 NLFSRRRIIQIYMGGLRLLDGQYMTQELLLGES---IAACADGVVVTNATIIDPYALLML 565
NLF RRR+IQ+Y G R+LDG +MTQ++ G S A+ ++ + + +I DP+ LL +
Sbjct: 635 NLFGRRRVIQVYERGARILDGSFMTQDVTFGASNSESASASESAIALSVSIADPFVLLRM 694
Query: 564 SDGSLHLVVGDASTLTVSISSPAIFQGSADSITACTLYLDKGPEPWLQKTSTDAWISTG- 388
SDGS+ L++GD T T+S++SPA F+ + S+++CTLY DKGPEPWL+KTSTDAW+STG
Sbjct: 695 SDGSVRLLIGDPITCTISVTSPASFESTKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGV 754
Query: 387 --------AAAQD--DIYCVLCRESGRLDIFEIPSFTCVFSVTDFPSGKGILVDTYLADV 238
AAQD DIYCV+C ++G L+IF++P+F CVFSV +F SGK LVD + +V
Sbjct: 755 GEAIDGTDGAAQDHGDIYCVVCFDNGNLEIFDVPNFNCVFSVGNFMSGKSHLVDALMKEV 814
Query: 237 MSGVQ---QSXXXXXXXXXXXXXXXXXXVCMQKWNDQHGRPFLFAILNDGTVLCYHAYLY 67
+ + + + MQ+W+ QH RPFLF IL+DGT+LCYHAYLY
Sbjct: 815 LKDSKKGDRDGVIIQGRKENVPDMKVVELAMQRWSGQHSRPFLFGILSDGTILCYHAYLY 874
Query: 66 AGQDNALKTE 37
D K E
Sbjct: 875 ESPDGTSKVE 884
Score = 75.5 bits (184), Expect = 1e-10
Identities = 44/127 (34%), Positives = 64/127 (50%)
Frame = -1
Query: 2675 MSYAAFKMIHEPTGVENCGVGFITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDAGA 2496
MS+AA+KM+ TG++NC GF+T DA
Sbjct: 1 MSFAAYKMMQCSTGIDNCAAGFLTHSRADSVPLQPEDL------------------DAEW 42
Query: 2495 PPPKNWSAPLPNIVITKANIVEVYSLRLHEDIKRPLPLSSSSSVKRGNVMSGLSGAFLEL 2316
P PLPN+V+T AN++EVY++R+ ED +P ++ +RG ++ G+ GA LEL
Sbjct: 43 PSRPRRVGPLPNLVVTAANVLEVYTVRIQED--QP---PKAADPRRGTLLDGIDGASLEL 97
Query: 2315 ACHLRLH 2295
CH RLH
Sbjct: 98 VCHYRLH 104
>ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Glycine max]
Length = 1447
Score = 846 bits (2185), Expect = 0.0
Identities = 424/790 (53%), Positives = 552/790 (69%), Gaps = 18/790 (2%)
Frame = -3
Query: 2352 CHVRSQRRVLRTCLSSQVTPGNEDGCRKRDAIILSFRDAKISVLEFDDSTNALRISSMHY 2173
CH R V + S G D R+RD+I+L+F DAKISVLE+DDS + LR SS+H
Sbjct: 101 CHYRLHGNVETMAVLSI---GGGDVSRRRDSIMLTFADAKISVLEYDDSIHGLRTSSLHC 157
Query: 2172 FEGPDWWHLKRGREKFARGPLVKSDPQGRCGGVLLYESQVIILQAAEAGSG-VGDDETSV 1996
FEGP+W HLKRGRE+FARGP+VK DPQGRCGGVL+Y+ Q+IIL+A +AGSG VG+D+
Sbjct: 158 FEGPEWLHLKRGREQFARGPVVKVDPQGRCGGVLIYDLQMIILKATQAGSGLVGEDDALG 217
Query: 1995 SRRTISAHIELSYAINLHELDMKHVKDFVFIYGYIEPVMVVLHEKEPTWAGSIAWKHHTC 1816
S ++A IE SY INL +LDM+HVKDF F++GYIEPVMV+LHE+E TWAG ++WKHHTC
Sbjct: 218 SSGAVAARIESSYMINLRDLDMRHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTC 277
Query: 1815 TISALSISMTSKQHPLIWSANNLPHDAYKXXXXXXXXXXXXXXXXXXLQYHSQSSSCTLA 1636
ISALSIS T KQHPLIWSA NLPHDAYK + YHSQS+SC LA
Sbjct: 278 MISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVISANTIHYHSQSASCALA 337
Query: 1635 LNDFARTVDGRPEIPRANVDVELDSAHVTWISSDTALFSAKTGXXXXXXLVHEGRAVQRL 1456
LN +A T+D EIPR++ +VELD+A+ TW+ SD AL S KTG LV++GR VQRL
Sbjct: 338 LNSYAVTLDSSQEIPRSSFNVELDAANATWLLSDVALLSTKTGELLLLTLVYDGRVVQRL 397
Query: 1455 ELTASRSSTLASCICTVGDAFFFLGSRLGDSLLVQFSCGIGSNTFSKSSKDEVSDFDVDT 1276
+L+ S++S L+S I T+G++ FFL SRLGDS+LVQFSCG G + S + K+EV D + D
Sbjct: 398 DLSKSKASVLSSGITTIGNSLFFLASRLGDSMLVQFSCGSGVSMLSSNLKEEVGDIEADA 457
Query: 1275 PSKRLRRASSDISQDIMSGEEAVPHNSTSGACDSSQPKAFLYTIRDLLINVGPLRDFAYG 1096
PSKRLRR+ SD QD++SGEE + S +S+Q K+F + +RD LINVGPL+DF+YG
Sbjct: 458 PSKRLRRSPSDALQDMVSGEELSLYGSAPNRTESAQ-KSFSFAVRDSLINVGPLKDFSYG 516
Query: 1095 LRANADLKEAGAAKQRNFELVACSGHGKNGSLCVFQQYIRPEQSTEVELEGCKGVWTVYH 916
LR NAD G AKQ N+ELV CSGHGKNGSLCV +Q IRPE TEVEL GCKG+WTVYH
Sbjct: 517 LRINADANATGIAKQSNYELVCCSGHGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVYH 576
Query: 915 KXXXXXXXXXXEIVTEESEYHAYIIFSFESQTRVLECADAIGEISSATEFFIKGPTISAG 736
K ++ ++ EYHAY+I S E++T VLE AD + E++ + +++++G T++AG
Sbjct: 577 KSTRSHNADSSKMADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAG 636
Query: 735 NLFSRRRIIQIYMGGLRLLDGQYMTQELLLGES---IAACADGVVVTNATIIDPYALLML 565
NLF R R+IQ+Y G R+LDG +MTQ++ G S + +D + + +I DP+ LL +
Sbjct: 637 NLFGRCRVIQVYERGARILDGSFMTQDVSFGASNLESGSASDSAIALSVSIADPFVLLRM 696
Query: 564 SDGSLHLVVGDASTLTVSISSPAIFQGSADSITACTLYLDKGPEPWLQKTSTDAWISTG- 388
SDGS+ L++GD ST T+S++SPA F+ S S+++CTLY DKGPEPWL+KTSTDAW+STG
Sbjct: 697 SDGSIRLLIGDPSTCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGV 756
Query: 387 --------AAAQD--DIYCVLCRESGRLDIFEIPSFTCVFSVTDFPSGKGILVDTYLADV 238
AAQD DIYCV+C ++G L+IF++P+F CVFSV +F SGK LVD + +V
Sbjct: 757 GETIDGTDGAAQDHGDIYCVVCFDNGNLEIFDVPNFNCVFSVENFMSGKSHLVDALMKEV 816
Query: 237 MSGVQQ---SXXXXXXXXXXXXXXXXXXVCMQKWNDQHGRPFLFAILNDGTVLCYHAYLY 67
+ +Q + MQ+W+ QH RPFLF IL+DGT+LCYHAYLY
Sbjct: 817 LKDSKQGDRDGVINQGRKENIPDMKVVELAMQRWSGQHSRPFLFGILSDGTILCYHAYLY 876
Query: 66 AGQDNALKTE 37
D+ K E
Sbjct: 877 ESPDSTSKVE 886
Score = 79.7 bits (195), Expect = 6e-12
Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Frame = -1
Query: 2675 MSYAAFKMIHEPTGVENCGVGFITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDAGA 2496
MS+AA+KM+ PTG++NC GF+T DA
Sbjct: 1 MSFAAYKMMQCPTGIDNCAAGFLTHSRSDFVPLQPDDL------------------DAEW 42
Query: 2495 PP-PKNWSAPLPNIVITKANIVEVYSLRLHEDIKRPLPLSSSSSVKRGNVMSGLSGAFLE 2319
P P++ LPN+V+T AN++EVY++RL ED P +++ +RG ++ G++GA LE
Sbjct: 43 PSRPRHHVGSLPNLVVTAANVLEVYAVRLQED----QPPKAAADSRRGALLDGIAGASLE 98
Query: 2318 LACHLRLH 2295
L CH RLH
Sbjct: 99 LVCHYRLH 106
>gb|EMJ21509.1| hypothetical protein PRUPE_ppa000211mg [Prunus persica]
Length = 1459
Score = 844 bits (2180), Expect = 0.0
Identities = 428/801 (53%), Positives = 547/801 (68%), Gaps = 22/801 (2%)
Frame = -3
Query: 2352 CHVRSQRRVLRTCLSSQVTPGNEDGCRKRDAIILSFRDAKISVLEFDDSTNALRISSMHY 2173
CH R V+ + S G DG R+RD+IIL+F DAKISVLEFDDS + LR SSMH
Sbjct: 107 CHYRLHGNVVTMAVLSS---GGGDGSRRRDSIILTFEDAKISVLEFDDSIHGLRTSSMHC 163
Query: 2172 FEGPDWWHLKRGREKFARGPLVKSDPQGRCGGVLLYESQVIILQAAEAGSG-VGDDETSV 1996
FEGP+W HL+RGRE FARGPLVK DPQGRCG +L+Y Q+IIL+A++ GSG VGDD++
Sbjct: 164 FEGPEWLHLRRGRESFARGPLVKVDPQGRCGSILVYGLQMIILKASQGGSGLVGDDDSFG 223
Query: 1995 SRRTISAHIELSYAINLHELDMKHVKDFVFIYGYIEPVMVVLHEKEPTWAGSIAWKHHTC 1816
S IS+ IE SY +NL ++DMKHVKDF F++GYIEPVMV+LHE+E TWAG ++WKHHTC
Sbjct: 224 SGGAISSRIESSYIVNLRDMDMKHVKDFTFLHGYIEPVMVILHERELTWAGRVSWKHHTC 283
Query: 1815 TISALSISMTSKQHPLIWSANNLPHDAYKXXXXXXXXXXXXXXXXXXLQYHSQSSSCTLA 1636
ISALSIS T KQHPLIWSA NLPHDAYK + YHSQS+SC LA
Sbjct: 284 MISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVISANSIHYHSQSASCALA 343
Query: 1635 LNDFARTVDGRPEIPRANVDVELDSAHVTWISSDTALFSAKTGXXXXXXLVHEGRAVQRL 1456
LN +A + D E+PR++ VELD+A+ TW+ +D AL S KTG LV++GR VQRL
Sbjct: 344 LNSYAVSADNSQEMPRSSFTVELDTANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRL 403
Query: 1455 ELTASRSSTLASCICTVGDAFFFLGSRLGDSLLVQFSCGIGSNTFSKSSKDEVSDFDVDT 1276
+L+ S++S L S I VG++ FFLGSRLGDSLLVQF+CG+G + S KDEV D + D
Sbjct: 404 DLSKSKASVLTSGITKVGNSLFFLGSRLGDSLLVQFTCGVGGSVLSSDMKDEVGDIEGDA 463
Query: 1275 P-SKRLRRASSDISQDIMSGEEAVPHNSTSGACDSSQPKAFLYTIRDLLINVGPLRDFAY 1099
P +KRLR +SSD QD++SGEE + S +S+Q K+F + +RD LINVGPL+DF+Y
Sbjct: 464 PLAKRLRMSSSDALQDMVSGEELSLYGSAPNNAESAQ-KSFSFAVRDSLINVGPLKDFSY 522
Query: 1098 GLRANADLKEAGAAKQRNFELVACSGHGKNGSLCVFQQYIRPEQSTEVELEGCKGVWTVY 919
GLR NAD G AKQ N+ELV CSGHGKNG+LCV +Q IRPE TEVEL GCKG+WTVY
Sbjct: 523 GLRINADANATGIAKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVY 582
Query: 918 HKXXXXXXXXXXEIVTEESEYHAYIIFSFESQTRVLECADAIGEISSATEFFIKGPTISA 739
HK +I + E+HAY+I S E++T VLE AD + E++ + ++F++G TI+A
Sbjct: 583 HKNARGHNADSSKIAASDDEFHAYLIISLEARTMVLETADLLSEVTESVDYFVQGRTIAA 642
Query: 738 GNLFSRRRIIQIYMGGLRLLDGQYMTQELLLGES---IAACADGVVVTNATIIDPYALLM 568
GNLF RRR++Q+Y G R+LDG +MTQ+L G S + + ++ V + +I+DPY LL
Sbjct: 643 GNLFGRRRVVQVYERGARILDGSFMTQDLSFGTSNSEMGSGSESSTVLSVSIVDPYVLLR 702
Query: 567 LSDGSLHLVVGDASTLTVSISSPAIFQGSADSITACTLYLDKGPEPWLQKTSTDAWISTG 388
+SDG + L+VGD S TVS S PA F+ S SI+ACTLY DKGPEPWL+KTSTDAW+STG
Sbjct: 703 MSDGGIRLLVGDPSLCTVSTSIPAAFESSKKSISACTLYHDKGPEPWLRKTSTDAWLSTG 762
Query: 387 -----------AAAQDDIYCVLCRESGRLDIFEIPSFTCVFSVTDFPSGKGILVDTYLAD 241
+ Q D+YCV+C ESG L+IF++P+F CVFSV F SG L+DT + D
Sbjct: 763 IDEAIDGADGVSHDQGDVYCVVCYESGSLEIFDVPNFNCVFSVDKFVSGNAHLIDTLMRD 822
Query: 240 VMSGVQQ------SXXXXXXXXXXXXXXXXXXVCMQKWNDQHGRPFLFAILNDGTVLCYH 79
Q+ + MQ+W+ QH RPFLF ILNDG +LCYH
Sbjct: 823 PPKDPQKLINKSSEEVSGQGRKENIQNMKVVELAMQRWSGQHSRPFLFGILNDGMILCYH 882
Query: 78 AYLYAGQDNALKTEMGSNGEN 16
AYL+ G + A KTE ++ +N
Sbjct: 883 AYLFEGPETASKTEDSASAQN 903
Score = 78.6 bits (192), Expect = 1e-11
Identities = 45/127 (35%), Positives = 65/127 (51%)
Frame = -1
Query: 2675 MSYAAFKMIHEPTGVENCGVGFITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDAGA 2496
MS+AA+KM+H PTG+ENC GFI+ ++
Sbjct: 1 MSFAAYKMMHWPTGIENCASGFISHSRSDFVPRIPPIQTEDL--------------ESEW 46
Query: 2495 PPPKNWSAPLPNIVITKANIVEVYSLRLHEDIKRPLPLSSSSSVKRGNVMSGLSGAFLEL 2316
P + P+P++V+T N++EVY +R+ E+ P +S KRG +M G+SGA LEL
Sbjct: 47 PTSRREIGPIPDLVVTAGNVLEVYVVRVQEEDGTRGPRASGEP-KRGGLMDGVSGASLEL 105
Query: 2315 ACHLRLH 2295
CH RLH
Sbjct: 106 VCHYRLH 112
>ref|XP_004308159.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Fragaria vesca subsp. vesca]
Length = 1439
Score = 841 bits (2173), Expect = 0.0
Identities = 423/796 (53%), Positives = 544/796 (68%), Gaps = 13/796 (1%)
Frame = -3
Query: 2352 CHVRSQRRVLRTCLSSQVTPGNEDGCRKRDAIILSFRDAKISVLEFDDSTNALRISSMHY 2173
CH R V+ + S G DG ++RDAIIL+F DAKISVLEFDDS + LR SSMH
Sbjct: 107 CHYRLHGNVMTMAVLSS---GGGDGSKRRDAIILTFEDAKISVLEFDDSIHGLRTSSMHC 163
Query: 2172 FEGPDWWHLKRGREKFARGPLVKSDPQGRCGGVLLYESQVIILQAAEAGSG-VGDDETSV 1996
FEGP+W HL+RGRE FARGP VK DPQGRCGGVL+Y+ Q+IIL+AA+ G G VGDD+
Sbjct: 164 FEGPEWLHLRRGRESFARGPSVKVDPQGRCGGVLVYDLQLIILKAAQGGYGLVGDDDGFA 223
Query: 1995 SRRTISAHIELSYAINLHELDMKHVKDFVFIYGYIEPVMVVLHEKEPTWAGSIAWKHHTC 1816
S ISA +E SY I+L ++DMKHVKDF F++GYIEPV+V+LHE+E TWAG ++WKHHTC
Sbjct: 224 SGAAISARVESSYIISLRDMDMKHVKDFTFVHGYIEPVLVILHERELTWAGRVSWKHHTC 283
Query: 1815 TISALSISMTSKQHPLIWSANNLPHDAYKXXXXXXXXXXXXXXXXXXLQYHSQSSSCTLA 1636
ISALSIS T KQHPLIWSA NLPHDAYK + YHSQS+SC LA
Sbjct: 284 MISALSISTTLKQHPLIWSAINLPHDAYKLLAVPSPIGGVLVISANSIHYHSQSASCALA 343
Query: 1635 LNDFARTVDGRPEIPRANVDVELDSAHVTWISSDTALFSAKTGXXXXXXLVHEGRAVQRL 1456
LN +A +VD E+PR++ VELD+A+ +W+S+D L S KTG LV++GR V RL
Sbjct: 344 LNSYAGSVDSSQEMPRSSFTVELDAANASWLSNDVILLSTKTGELLLLTLVYDGRVVHRL 403
Query: 1455 ELTASRSSTLASCICTVGDAFFFLGSRLGDSLLVQFSCGIGSNTFSKSSKDEVSDFDVDT 1276
+L+ S++S L S I TVG++ FFLGSRLGDSLLVQF+ G+G++ S KDEV D + D
Sbjct: 404 DLSKSKASVLTSGIATVGNSLFFLGSRLGDSLLVQFTSGVGASMLSADLKDEVGDIEGDA 463
Query: 1275 PS-KRLRRASSDISQDIMSGEEAVPHNSTSGACDSSQPKAFLYTIRDLLINVGPLRDFAY 1099
PS KRLR +SSD QD++SGEE + S +S+Q ++F + +RD L+NVGPL+DF+Y
Sbjct: 464 PSAKRLRMSSSDALQDMISGEELSLYGSAQNNAESAQ-RSFSFAVRDSLVNVGPLKDFSY 522
Query: 1098 GLRANADLKEAGAAKQRNFELVACSGHGKNGSLCVFQQYIRPEQSTEVELEGCKGVWTVY 919
GLR NAD G AKQ N+ELV CSGHGKNG+LCV +Q IRPE TEV L GCKG+WTVY
Sbjct: 523 GLRINADANATGIAKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEVALPGCKGIWTVY 582
Query: 918 HKXXXXXXXXXXEIVTEESEYHAYIIFSFESQTRVLECADAIGEISSATEFFIKGPTISA 739
HK + + EYHA++I S E++T VLE AD + E++ ++F++G TI+A
Sbjct: 583 HKNARGHNAE-----SYDDEYHAFLIISLEARTMVLETADHLSEVTDKVDYFLQGRTIAA 637
Query: 738 GNLFSRRRIIQIYMGGLRLLDGQYMTQELLLGESIAACADG---VVVTNATIIDPYALLM 568
GNLF RRR++QIY G R+L+G YMTQ+L G S + G V + +I+DPY LL
Sbjct: 638 GNLFGRRRVVQIYERGARILEGYYMTQDLSFGASNSESGSGSESATVLSVSIVDPYVLLR 697
Query: 567 LSDGSLHLVVGDASTLTVSISSPAIFQGSADSITACTLYLDKGPEPWLQKTSTDAWISTG 388
+SDG + L+VGD S+ TVS+S+PA F+ S ++ACTLY D+GPEPWL+K+STDAW+STG
Sbjct: 698 MSDGGIRLLVGDPSSCTVSVSNPAAFESSKKLVSACTLYHDEGPEPWLRKSSTDAWLSTG 757
Query: 387 AAA--------QDDIYCVLCRESGRLDIFEIPSFTCVFSVTDFPSGKGILVDTYLADVMS 232
Q D+YCV+C ESG L+IF++P+F CVFSV F SGK +LVDT++ D
Sbjct: 758 IDEAIDGVLHDQGDVYCVICYESGSLEIFDVPNFNCVFSVEKFVSGKPLLVDTFMGDPQK 817
Query: 231 GVQQSXXXXXXXXXXXXXXXXXXVCMQKWNDQHGRPFLFAILNDGTVLCYHAYLYAGQDN 52
+ MQ+W+ QH RPFLF ILNDG + CYHAYLY D+
Sbjct: 818 SQSSEEVSGLSRKEKLQNMRVVELTMQRWSGQHSRPFLFGILNDGMIFCYHAYLYESMDS 877
Query: 51 ALKTEMGSNGENVLTS 4
KTE+ ++ +N S
Sbjct: 878 TSKTEVSASSQNTTAS 893
Score = 87.0 bits (214), Expect = 4e-14
Identities = 52/128 (40%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Frame = -1
Query: 2675 MSYAAFKMIHEPTGVENCGVGFITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDAGA 2496
MSYAA KM+H PTG+ENC GFIT D+
Sbjct: 1 MSYAAHKMMHWPTGIENCAAGFITHSRADFVPRIPQIQTDDL--------------DSDW 46
Query: 2495 PPPKNWSAPLPNIVITKANIVEVYSLRLHE-DIKRPLPLSSSSSVKRGNVMSGLSGAFLE 2319
P P+ P+PN+V+T AN++EVY +R+ E D R S S KRG +M G++GA LE
Sbjct: 47 PAPRREIGPVPNLVVTAANVLEVYVVRVQEQDTARGSRASGES--KRGGLMDGVAGASLE 104
Query: 2318 LACHLRLH 2295
L CH RLH
Sbjct: 105 LVCHYRLH 112
>ref|XP_004514987.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Cicer arietinum]
Length = 1447
Score = 836 bits (2159), Expect = 0.0
Identities = 424/792 (53%), Positives = 549/792 (69%), Gaps = 20/792 (2%)
Frame = -3
Query: 2352 CHVRSQRRVLRTCLSSQVTPGNEDGCRKRDAIILSFRDAKISVLEFDDSTNALRISSMHY 2173
CH R V + S G D R+RD+IIL+F+DAKISVLE+DDS + LR SS+H
Sbjct: 103 CHYRLHGNVESVAVLSV---GGGDASRRRDSIILTFKDAKISVLEYDDSIHGLRTSSLHC 159
Query: 2172 FEGPDWWHLKRGREKFARGPLVKSDPQGRCGGVLLYESQVIILQAAEAGSG-VGDDETSV 1996
FEGP+W HLKRGRE FARGP+ K DPQGRCGGVL+Y+ Q+IIL+ +AGSG VG+D+
Sbjct: 160 FEGPEWLHLKRGREHFARGPVAKVDPQGRCGGVLVYDLQMIILKTTQAGSGLVGEDDVLG 219
Query: 1995 SRRTISAHIELSYAINLHELDMKHVKDFVFIYGYIEPVMVVLHEKEPTWAGSIAWKHHTC 1816
S ++A IE SY INL +LDM+HVKDF F++GYIEPVMV+LHE+E TWAG ++WKHHTC
Sbjct: 220 SGGAVAARIESSYMINLRDLDMRHVKDFTFLHGYIEPVMVILHERELTWAGRVSWKHHTC 279
Query: 1815 TISALSISMTSKQHPLIWSANNLPHDAYKXXXXXXXXXXXXXXXXXXLQYHSQSSSCTLA 1636
ISALSIS T KQHPLIWSA NLPHDAYK + YHSQS+SC LA
Sbjct: 280 MISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGANTIHYHSQSASCALA 339
Query: 1635 LNDFARTVDGRPEIPRANVDVELDSAHVTWISSDTALFSAKTGXXXXXXLVHEGRAVQRL 1456
LN +A +VD E+PR++ +VELD+A+ TW+ +D AL S KTG L+++GR VQRL
Sbjct: 340 LNSYAVSVDNSQEMPRSSFNVELDAANATWLLNDVALLSTKTGELLLLTLIYDGRVVQRL 399
Query: 1455 ELTASRSSTLASCICTVGDAFFFLGSRLGDSLLVQFSCGIGSNTFSKSSKDEVSDFDVDT 1276
+L+ S++S L+S + T+G++ FFL SRLGDS+LVQFS G G + S + K+EV DFDVD
Sbjct: 400 DLSKSKASVLSSGVTTIGNSLFFLASRLGDSMLVQFSSGSGVSMLSSNLKEEVGDFDVDA 459
Query: 1275 PS-KRLRRASSDISQDIMSGEEAVPHNSTSGACDSSQPKAFLYTIRDLLINVGPLRDFAY 1099
S KR+RR+ SD QD++SGEE + S + +S+Q K+F + +RD LINVGPL+DF+Y
Sbjct: 460 SSAKRMRRSPSDTLQDMVSGEELSLYGSATNRTESAQ-KSFSFAVRDSLINVGPLKDFSY 518
Query: 1098 GLRANADLKEAGAAKQRNFELVACSGHGKNGSLCVFQQYIRPEQSTEVELEGCKGVWTVY 919
GLR NAD G AKQ N+ELV CSGHGKNGSLCV +Q IRPE TEVEL GCKG+WTVY
Sbjct: 519 GLRINADANATGIAKQSNYELVCCSGHGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVY 578
Query: 918 HKXXXXXXXXXXEIVTEESEYHAYIIFSFESQTRVLECADAIGEISSATEFFIKGPTISA 739
HK ++ +E EYHAY+I S ES+T VLE AD + E++ + +++++G T++A
Sbjct: 579 HKSTRSLNADSSKLADDEDEYHAYLIISLESRTMVLETADLLSEVTESVDYYVQGKTLAA 638
Query: 738 GNLFSRRRIIQIYMGGLRLLDGQYMTQELLLGESIAAC---ADGVVVTNATIIDPYALLM 568
GNLF RRR+IQ+Y G R+LDG +MTQ++ G S + ++ + + +I DPY LL
Sbjct: 639 GNLFGRRRVIQVYERGARILDGSFMTQDVSFGASNSEANYGSESALALSVSIADPYVLLK 698
Query: 567 LSDGSLHLVVGDASTLTVSISSPAIFQGSADSITACTLYLDKGPEPWLQKTSTDAWISTG 388
+SDGS+ L+VGD ST T+S++SPA F+ S S++ CTLY DKGPEPWL+KTSTDAW+STG
Sbjct: 699 MSDGSVRLLVGDPSTCTISVTSPASFESSKGSVSTCTLYHDKGPEPWLRKTSTDAWLSTG 758
Query: 387 ---------AAAQD--DIYCVLCRESGRLDIFEIPSFTCVFSVTDFPSGKGILVDTYLAD 241
AAQD DIYCV+C E+ L+IF++P+F+CVFSV +F SGK LVD +
Sbjct: 759 VGEAIDGTDGAAQDHGDIYCVVCYENDSLEIFDVPNFSCVFSVENFLSGKSHLVDALTKE 818
Query: 240 V----MSGVQQSXXXXXXXXXXXXXXXXXXVCMQKWNDQHGRPFLFAILNDGTVLCYHAY 73
V G + S + MQ+W+ +HGRPFLF IL+DGT LCYHAY
Sbjct: 819 VPKDSQKGDKVSDGVVSQGRKDALNMKVVELAMQRWSGKHGRPFLFGILSDGTTLCYHAY 878
Query: 72 LYAGQDNALKTE 37
LY D K E
Sbjct: 879 LYESPDGTSKVE 890
Score = 79.7 bits (195), Expect = 6e-12
Identities = 50/133 (37%), Positives = 70/133 (52%)
Frame = -1
Query: 2675 MSYAAFKMIHEPTGVENCGVGFITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDAGA 2496
MS+AA+KM+ PTG++NC GF+T D
Sbjct: 1 MSFAAYKMMQWPTGIQNCASGFLTHSRSDSTPRIPPIQHNDDDDI----------DSDWV 50
Query: 2495 PPPKNWSAPLPNIVITKANIVEVYSLRLHEDIKRPLPLSSSSSVKRGNVMSGLSGAFLEL 2316
P P++ APLPN+VIT ANI+EVY++R+ +D P SS+ + V+ GL+GA LEL
Sbjct: 51 PQPRDL-APLPNLVITAANILEVYTVRIQQD-----PPKSSADPR---VLDGLAGASLEL 101
Query: 2315 ACHLRLHQEMKMV 2277
CH RLH ++ V
Sbjct: 102 VCHYRLHGNVESV 114
>ref|XP_006421760.1| hypothetical protein CICLE_v10004147mg [Citrus clementina]
gi|557523633|gb|ESR35000.1| hypothetical protein
CICLE_v10004147mg [Citrus clementina]
Length = 1457
Score = 835 bits (2156), Expect = 0.0
Identities = 421/794 (53%), Positives = 540/794 (68%), Gaps = 22/794 (2%)
Frame = -3
Query: 2352 CHVRSQRRVLRTCLSSQVTPGNEDGCRKRDAIILSFRDAKISVLEFDDSTNALRISSMHY 2173
CH R V + SQ G D R+RD+IIL+F DAKISVLEFDDS + LRI+SMH
Sbjct: 105 CHYRLHGNVESLAILSQ---GGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHC 161
Query: 2172 FEGPDWWHLKRGREKFARGPLVKSDPQGRCGGVLLYESQVIILQAAEAGSG-VGDDETSV 1996
FE P+W HLKRGRE FARGPLVK DPQGRCGGVL+Y Q+IIL+A++ GSG VGD++T
Sbjct: 162 FESPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFG 221
Query: 1995 SRRTISAHIELSYAINLHELDMKHVKDFVFIYGYIEPVMVVLHEKEPTWAGSIAWKHHTC 1816
S SA IE S+ INL +LDMKHVKDF+F++GYIEPVMV+LHE+E TWAG ++WKHHTC
Sbjct: 222 SGGGFSARIESSHVINLRDLDMKHVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTC 281
Query: 1815 TISALSISMTSKQHPLIWSANNLPHDAYKXXXXXXXXXXXXXXXXXXLQYHSQSSSCTLA 1636
ISALSIS T KQHPLIWSA NLPHDAYK + YHSQS+SC LA
Sbjct: 282 MISALSISTTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALA 341
Query: 1635 LNDFARTVDGRPEIPRANVDVELDSAHVTWISSDTALFSAKTGXXXXXXLVHEGRAVQRL 1456
LN++A ++D E+PR++ VELD+AH TW+ +D AL S KTG +V++GR VQRL
Sbjct: 342 LNNYAVSLDSSQELPRSSFSVELDAAHATWLQNDVALLSTKTGDLVLLTVVYDGRVVQRL 401
Query: 1455 ELTASRSSTLASCICTVGDAFFFLGSRLGDSLLVQFSCGIGSNTFSKSSKDEVSDFDVDT 1276
+L+ + S L S I T+G++ FFLGSRLGDSLLVQF+CG G++ S K+E D + D
Sbjct: 402 DLSKTNPSVLTSDITTIGNSLFFLGSRLGDSLLVQFTCGSGTSMLSSGPKEEFGDIEADA 461
Query: 1275 PS-KRLRRASSDISQDIMSGEEAVPHNSTSGACDSSQPKAFLYTIRDLLINVGPLRDFAY 1099
PS KRLRR+SSD QD+++GEE + S S +S+Q K F + +RD L+N+GPL+DF+Y
Sbjct: 462 PSTKRLRRSSSDALQDMVNGEELSLYGSASNNTESAQ-KTFSFAVRDSLVNIGPLKDFSY 520
Query: 1098 GLRANADLKEAGAAKQRNFELVACSGHGKNGSLCVFQQYIRPEQSTEVELEGCKGVWTVY 919
GLR NAD G +KQ N+ELV CSGHGKNG+LCV +Q IRPE TEVEL GCKG+WTVY
Sbjct: 521 GLRINADASATGISKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVY 580
Query: 918 HKXXXXXXXXXXEIVTEESEYHAYIIFSFESQTRVLECADAIGEISSATEFFIKGPTISA 739
HK + + EYHAY+I S E++T VLE AD + E++ + ++F++G TI+A
Sbjct: 581 HKSSRGHNTDSSRMAAYDDEYHAYLIISLEARTMVLETADLLTEVTESVDYFVQGRTIAA 640
Query: 738 GNLFSRRRIIQIYMGGLRLLDGQYMTQELLLGESIAACADG---VVVTNATIIDPYALLM 568
GNLF RRR+IQ++ G R+LDG YMTQ+L G S + G V + +I DPY LL
Sbjct: 641 GNLFGRRRVIQVFERGARILDGSYMTQDLSFGPSNSESGSGSENSTVLSVSIADPYVLLG 700
Query: 567 LSDGSLHLVVGDASTLTVSISSPAIFQGSADSITACTLYLDKGPEPWLQKTSTDAWISTG 388
+SDGS+ L+VGD ST TVS+ +PA + S ++ACTLY DKGPEPWL+KTSTDAW+STG
Sbjct: 701 MSDGSIRLLVGDPSTCTVSVQTPAAIESSKKPVSACTLYHDKGPEPWLRKTSTDAWLSTG 760
Query: 387 AAA-----------QDDIYCVLCRESGRLDIFEIPSFTCVFSVTDFPSGKGILVDTYLAD 241
Q DIY V+C ESG L+IF++P+F CVF+V F SG+ +VDTY+ +
Sbjct: 761 VGEAIDGADGGPLDQGDIYSVVCYESGALEIFDVPNFNCVFTVDKFVSGRTHIVDTYMRE 820
Query: 240 VMSGVQ------QSXXXXXXXXXXXXXXXXXXVCMQKWNDQHGRPFLFAILNDGTVLCYH 79
+ + + MQ+W+ H RPFLFAIL DGT+LCY
Sbjct: 821 ALKDSETEINSSSEEGTGQGRKENIHSMKVVELAMQRWSGHHSRPFLFAILTDGTILCYQ 880
Query: 78 AYLYAGQDNALKTE 37
AYL+ G +N K++
Sbjct: 881 AYLFEGSENTSKSD 894
Score = 79.0 bits (193), Expect = 1e-11
Identities = 45/127 (35%), Positives = 62/127 (48%)
Frame = -1
Query: 2675 MSYAAFKMIHEPTGVENCGVGFITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDAGA 2496
MS+AA+KM+H PTG+ NCG GFIT
Sbjct: 1 MSFAAYKMMHWPTGIANCGSGFITHSRADYVPQIPLIQTEELDSEL-------------- 46
Query: 2495 PPPKNWSAPLPNIVITKANIVEVYSLRLHEDIKRPLPLSSSSSVKRGNVMSGLSGAFLEL 2316
P K P+PN+V+T AN++E+Y +R+ E+ + +S KR +M G+S A LEL
Sbjct: 47 -PSKRGIGPVPNLVVTAANVIEIYVVRVQEEGSK--ESKNSGETKRRVLMDGISAASLEL 103
Query: 2315 ACHLRLH 2295
CH RLH
Sbjct: 104 VCHYRLH 110
>ref|XP_006421759.1| hypothetical protein CICLE_v10004147mg [Citrus clementina]
gi|557523632|gb|ESR34999.1| hypothetical protein
CICLE_v10004147mg [Citrus clementina]
Length = 1458
Score = 835 bits (2156), Expect = 0.0
Identities = 421/794 (53%), Positives = 540/794 (68%), Gaps = 22/794 (2%)
Frame = -3
Query: 2352 CHVRSQRRVLRTCLSSQVTPGNEDGCRKRDAIILSFRDAKISVLEFDDSTNALRISSMHY 2173
CH R V + SQ G D R+RD+IIL+F DAKISVLEFDDS + LRI+SMH
Sbjct: 105 CHYRLHGNVESLAILSQ---GGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHC 161
Query: 2172 FEGPDWWHLKRGREKFARGPLVKSDPQGRCGGVLLYESQVIILQAAEAGSG-VGDDETSV 1996
FE P+W HLKRGRE FARGPLVK DPQGRCGGVL+Y Q+IIL+A++ GSG VGD++T
Sbjct: 162 FESPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFG 221
Query: 1995 SRRTISAHIELSYAINLHELDMKHVKDFVFIYGYIEPVMVVLHEKEPTWAGSIAWKHHTC 1816
S SA IE S+ INL +LDMKHVKDF+F++GYIEPVMV+LHE+E TWAG ++WKHHTC
Sbjct: 222 SGGGFSARIESSHVINLRDLDMKHVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTC 281
Query: 1815 TISALSISMTSKQHPLIWSANNLPHDAYKXXXXXXXXXXXXXXXXXXLQYHSQSSSCTLA 1636
ISALSIS T KQHPLIWSA NLPHDAYK + YHSQS+SC LA
Sbjct: 282 MISALSISTTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALA 341
Query: 1635 LNDFARTVDGRPEIPRANVDVELDSAHVTWISSDTALFSAKTGXXXXXXLVHEGRAVQRL 1456
LN++A ++D E+PR++ VELD+AH TW+ +D AL S KTG +V++GR VQRL
Sbjct: 342 LNNYAVSLDSSQELPRSSFSVELDAAHATWLQNDVALLSTKTGDLVLLTVVYDGRVVQRL 401
Query: 1455 ELTASRSSTLASCICTVGDAFFFLGSRLGDSLLVQFSCGIGSNTFSKSSKDEVSDFDVDT 1276
+L+ + S L S I T+G++ FFLGSRLGDSLLVQF+CG G++ S K+E D + D
Sbjct: 402 DLSKTNPSVLTSDITTIGNSLFFLGSRLGDSLLVQFTCGSGTSMLSSGPKEEFGDIEADA 461
Query: 1275 PS-KRLRRASSDISQDIMSGEEAVPHNSTSGACDSSQPKAFLYTIRDLLINVGPLRDFAY 1099
PS KRLRR+SSD QD+++GEE + S S +S+Q K F + +RD L+N+GPL+DF+Y
Sbjct: 462 PSTKRLRRSSSDALQDMVNGEELSLYGSASNNTESAQ-KTFSFAVRDSLVNIGPLKDFSY 520
Query: 1098 GLRANADLKEAGAAKQRNFELVACSGHGKNGSLCVFQQYIRPEQSTEVELEGCKGVWTVY 919
GLR NAD G +KQ N+ELV CSGHGKNG+LCV +Q IRPE TEVEL GCKG+WTVY
Sbjct: 521 GLRINADASATGISKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVY 580
Query: 918 HKXXXXXXXXXXEIVTEESEYHAYIIFSFESQTRVLECADAIGEISSATEFFIKGPTISA 739
HK + + EYHAY+I S E++T VLE AD + E++ + ++F++G TI+A
Sbjct: 581 HKSSRGHNTDSSRMAAYDDEYHAYLIISLEARTMVLETADLLTEVTESVDYFVQGRTIAA 640
Query: 738 GNLFSRRRIIQIYMGGLRLLDGQYMTQELLLGESIAACADG---VVVTNATIIDPYALLM 568
GNLF RRR+IQ++ G R+LDG YMTQ+L G S + G V + +I DPY LL
Sbjct: 641 GNLFGRRRVIQVFERGARILDGSYMTQDLSFGPSNSESGSGSENSTVLSVSIADPYVLLG 700
Query: 567 LSDGSLHLVVGDASTLTVSISSPAIFQGSADSITACTLYLDKGPEPWLQKTSTDAWISTG 388
+SDGS+ L+VGD ST TVS+ +PA + S ++ACTLY DKGPEPWL+KTSTDAW+STG
Sbjct: 701 MSDGSIRLLVGDPSTCTVSVQTPAAIESSKKPVSACTLYHDKGPEPWLRKTSTDAWLSTG 760
Query: 387 AAA-----------QDDIYCVLCRESGRLDIFEIPSFTCVFSVTDFPSGKGILVDTYLAD 241
Q DIY V+C ESG L+IF++P+F CVF+V F SG+ +VDTY+ +
Sbjct: 761 VGEAIDGADGGPLDQGDIYSVVCYESGALEIFDVPNFNCVFTVDKFVSGRTHIVDTYMRE 820
Query: 240 VMSGVQ------QSXXXXXXXXXXXXXXXXXXVCMQKWNDQHGRPFLFAILNDGTVLCYH 79
+ + + MQ+W+ H RPFLFAIL DGT+LCY
Sbjct: 821 ALKDSETEINSSSEEGTGQGRKENIHSMKVVELAMQRWSGHHSRPFLFAILTDGTILCYQ 880
Query: 78 AYLYAGQDNALKTE 37
AYL+ G +N K++
Sbjct: 881 AYLFEGSENTSKSD 894
Score = 79.0 bits (193), Expect = 1e-11
Identities = 45/127 (35%), Positives = 62/127 (48%)
Frame = -1
Query: 2675 MSYAAFKMIHEPTGVENCGVGFITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDAGA 2496
MS+AA+KM+H PTG+ NCG GFIT
Sbjct: 1 MSFAAYKMMHWPTGIANCGSGFITHSRADYVPQIPLIQTEELDSEL-------------- 46
Query: 2495 PPPKNWSAPLPNIVITKANIVEVYSLRLHEDIKRPLPLSSSSSVKRGNVMSGLSGAFLEL 2316
P K P+PN+V+T AN++E+Y +R+ E+ + +S KR +M G+S A LEL
Sbjct: 47 -PSKRGIGPVPNLVVTAANVIEIYVVRVQEEGSK--ESKNSGETKRRVLMDGISAASLEL 103
Query: 2315 ACHLRLH 2295
CH RLH
Sbjct: 104 VCHYRLH 110
>ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X2 [Citrus sinensis]
Length = 1457
Score = 833 bits (2151), Expect = 0.0
Identities = 420/794 (52%), Positives = 540/794 (68%), Gaps = 22/794 (2%)
Frame = -3
Query: 2352 CHVRSQRRVLRTCLSSQVTPGNEDGCRKRDAIILSFRDAKISVLEFDDSTNALRISSMHY 2173
CH R V + SQ G D R+RD+IIL+F DAKISVLEFDDS + LRI+SMH
Sbjct: 105 CHYRLHGNVESLAILSQ---GGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHC 161
Query: 2172 FEGPDWWHLKRGREKFARGPLVKSDPQGRCGGVLLYESQVIILQAAEAGSG-VGDDETSV 1996
FE P+W HLKRGRE FARGPLVK DPQGRCGGVL+Y Q+IIL+A++ GSG VGD++T
Sbjct: 162 FESPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFG 221
Query: 1995 SRRTISAHIELSYAINLHELDMKHVKDFVFIYGYIEPVMVVLHEKEPTWAGSIAWKHHTC 1816
S SA IE S+ INL +LDMKHVKDF+F++GYIEPVMV+LHE+E TWAG ++WKHHTC
Sbjct: 222 SGGGFSARIESSHVINLRDLDMKHVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTC 281
Query: 1815 TISALSISMTSKQHPLIWSANNLPHDAYKXXXXXXXXXXXXXXXXXXLQYHSQSSSCTLA 1636
ISALSIS T KQHPLIWSA NLPHDAYK + YHSQS+SC LA
Sbjct: 282 MISALSISTTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALA 341
Query: 1635 LNDFARTVDGRPEIPRANVDVELDSAHVTWISSDTALFSAKTGXXXXXXLVHEGRAVQRL 1456
LN++A ++D E+PR++ VELD+AH TW+ +D AL S KTG +V++GR VQRL
Sbjct: 342 LNNYAVSLDSSQELPRSSFSVELDAAHATWLQNDVALLSTKTGDLVLLTVVYDGRVVQRL 401
Query: 1455 ELTASRSSTLASCICTVGDAFFFLGSRLGDSLLVQFSCGIGSNTFSKSSKDEVSDFDVDT 1276
+L+ + S L S I T+G++ FFLGSRLGDSLLVQF+CG G++ S K+E D + D
Sbjct: 402 DLSKTNPSVLTSDITTIGNSLFFLGSRLGDSLLVQFTCGSGTSMLSSGLKEEFGDIEADA 461
Query: 1275 PS-KRLRRASSDISQDIMSGEEAVPHNSTSGACDSSQPKAFLYTIRDLLINVGPLRDFAY 1099
PS KRLRR+SSD QD+++GEE + S S +S+Q K F + +RD L+N+GPL+DF+Y
Sbjct: 462 PSTKRLRRSSSDALQDMVNGEELSLYGSASNNTESAQ-KTFSFAVRDSLVNIGPLKDFSY 520
Query: 1098 GLRANADLKEAGAAKQRNFELVACSGHGKNGSLCVFQQYIRPEQSTEVELEGCKGVWTVY 919
GLR NAD G +KQ N+ELV CSGHGKNG+LCV +Q IRPE TEVEL GCKG+WTVY
Sbjct: 521 GLRINADASATGISKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVY 580
Query: 918 HKXXXXXXXXXXEIVTEESEYHAYIIFSFESQTRVLECADAIGEISSATEFFIKGPTISA 739
HK + + EYHAY+I S E++T VLE AD + E++ + ++F++G TI+A
Sbjct: 581 HKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETADLLTEVTESVDYFVQGRTIAA 640
Query: 738 GNLFSRRRIIQIYMGGLRLLDGQYMTQELLLGESIAACADG---VVVTNATIIDPYALLM 568
GNLF RRR+IQ++ G R+LDG YMTQ+L G S + G V + +I DPY LL
Sbjct: 641 GNLFGRRRVIQVFERGARILDGSYMTQDLSFGPSNSESGSGSENSTVLSVSIADPYVLLG 700
Query: 567 LSDGSLHLVVGDASTLTVSISSPAIFQGSADSITACTLYLDKGPEPWLQKTSTDAWISTG 388
+SDGS+ L+VGD ST TVS+ +PA + S +++CTLY DKGPEPWL+KTSTDAW+STG
Sbjct: 701 MSDGSIRLLVGDPSTCTVSVQTPAAIESSKKPVSSCTLYHDKGPEPWLRKTSTDAWLSTG 760
Query: 387 AAA-----------QDDIYCVLCRESGRLDIFEIPSFTCVFSVTDFPSGKGILVDTYLAD 241
Q DIY V+C ESG L+IF++P+F CVF+V F SG+ +VDTY+ +
Sbjct: 761 VGEAIDGADGGPLDQGDIYSVVCYESGALEIFDVPNFNCVFTVDKFVSGRTHIVDTYMRE 820
Query: 240 VMSGVQ------QSXXXXXXXXXXXXXXXXXXVCMQKWNDQHGRPFLFAILNDGTVLCYH 79
+ + + MQ+W+ H RPFLFAIL DGT+LCY
Sbjct: 821 ALKDSETEINSSSEEGTGQGRKENIHSMKVVELAMQRWSGHHSRPFLFAILTDGTILCYQ 880
Query: 78 AYLYAGQDNALKTE 37
AYL+ G +N K++
Sbjct: 881 AYLFEGPENTSKSD 894
Score = 79.0 bits (193), Expect = 1e-11
Identities = 45/127 (35%), Positives = 62/127 (48%)
Frame = -1
Query: 2675 MSYAAFKMIHEPTGVENCGVGFITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDAGA 2496
MS+AA+KM+H PTG+ NCG GFIT
Sbjct: 1 MSFAAYKMMHWPTGIANCGSGFITHSRADYVPQIPLIQTEELDSEL-------------- 46
Query: 2495 PPPKNWSAPLPNIVITKANIVEVYSLRLHEDIKRPLPLSSSSSVKRGNVMSGLSGAFLEL 2316
P K P+PN+V+T AN++E+Y +R+ E+ + +S KR +M G+S A LEL
Sbjct: 47 -PSKRGIGPVPNLVVTAANVIEIYVVRVQEEGSK--ESKNSGETKRRVLMDGISAASLEL 103
Query: 2315 ACHLRLH 2295
CH RLH
Sbjct: 104 VCHYRLH 110
>ref|XP_006490255.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X1 [Citrus sinensis]
Length = 1458
Score = 833 bits (2151), Expect = 0.0
Identities = 420/794 (52%), Positives = 540/794 (68%), Gaps = 22/794 (2%)
Frame = -3
Query: 2352 CHVRSQRRVLRTCLSSQVTPGNEDGCRKRDAIILSFRDAKISVLEFDDSTNALRISSMHY 2173
CH R V + SQ G D R+RD+IIL+F DAKISVLEFDDS + LRI+SMH
Sbjct: 105 CHYRLHGNVESLAILSQ---GGADNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHC 161
Query: 2172 FEGPDWWHLKRGREKFARGPLVKSDPQGRCGGVLLYESQVIILQAAEAGSG-VGDDETSV 1996
FE P+W HLKRGRE FARGPLVK DPQGRCGGVL+Y Q+IIL+A++ GSG VGD++T
Sbjct: 162 FESPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFG 221
Query: 1995 SRRTISAHIELSYAINLHELDMKHVKDFVFIYGYIEPVMVVLHEKEPTWAGSIAWKHHTC 1816
S SA IE S+ INL +LDMKHVKDF+F++GYIEPVMV+LHE+E TWAG ++WKHHTC
Sbjct: 222 SGGGFSARIESSHVINLRDLDMKHVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTC 281
Query: 1815 TISALSISMTSKQHPLIWSANNLPHDAYKXXXXXXXXXXXXXXXXXXLQYHSQSSSCTLA 1636
ISALSIS T KQHPLIWSA NLPHDAYK + YHSQS+SC LA
Sbjct: 282 MISALSISTTLKQHPLIWSAMNLPHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALA 341
Query: 1635 LNDFARTVDGRPEIPRANVDVELDSAHVTWISSDTALFSAKTGXXXXXXLVHEGRAVQRL 1456
LN++A ++D E+PR++ VELD+AH TW+ +D AL S KTG +V++GR VQRL
Sbjct: 342 LNNYAVSLDSSQELPRSSFSVELDAAHATWLQNDVALLSTKTGDLVLLTVVYDGRVVQRL 401
Query: 1455 ELTASRSSTLASCICTVGDAFFFLGSRLGDSLLVQFSCGIGSNTFSKSSKDEVSDFDVDT 1276
+L+ + S L S I T+G++ FFLGSRLGDSLLVQF+CG G++ S K+E D + D
Sbjct: 402 DLSKTNPSVLTSDITTIGNSLFFLGSRLGDSLLVQFTCGSGTSMLSSGLKEEFGDIEADA 461
Query: 1275 PS-KRLRRASSDISQDIMSGEEAVPHNSTSGACDSSQPKAFLYTIRDLLINVGPLRDFAY 1099
PS KRLRR+SSD QD+++GEE + S S +S+Q K F + +RD L+N+GPL+DF+Y
Sbjct: 462 PSTKRLRRSSSDALQDMVNGEELSLYGSASNNTESAQ-KTFSFAVRDSLVNIGPLKDFSY 520
Query: 1098 GLRANADLKEAGAAKQRNFELVACSGHGKNGSLCVFQQYIRPEQSTEVELEGCKGVWTVY 919
GLR NAD G +KQ N+ELV CSGHGKNG+LCV +Q IRPE TEVEL GCKG+WTVY
Sbjct: 521 GLRINADASATGISKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVY 580
Query: 918 HKXXXXXXXXXXEIVTEESEYHAYIIFSFESQTRVLECADAIGEISSATEFFIKGPTISA 739
HK + + EYHAY+I S E++T VLE AD + E++ + ++F++G TI+A
Sbjct: 581 HKSSRGHNADSSRMAAYDDEYHAYLIISLEARTMVLETADLLTEVTESVDYFVQGRTIAA 640
Query: 738 GNLFSRRRIIQIYMGGLRLLDGQYMTQELLLGESIAACADG---VVVTNATIIDPYALLM 568
GNLF RRR+IQ++ G R+LDG YMTQ+L G S + G V + +I DPY LL
Sbjct: 641 GNLFGRRRVIQVFERGARILDGSYMTQDLSFGPSNSESGSGSENSTVLSVSIADPYVLLG 700
Query: 567 LSDGSLHLVVGDASTLTVSISSPAIFQGSADSITACTLYLDKGPEPWLQKTSTDAWISTG 388
+SDGS+ L+VGD ST TVS+ +PA + S +++CTLY DKGPEPWL+KTSTDAW+STG
Sbjct: 701 MSDGSIRLLVGDPSTCTVSVQTPAAIESSKKPVSSCTLYHDKGPEPWLRKTSTDAWLSTG 760
Query: 387 AAA-----------QDDIYCVLCRESGRLDIFEIPSFTCVFSVTDFPSGKGILVDTYLAD 241
Q DIY V+C ESG L+IF++P+F CVF+V F SG+ +VDTY+ +
Sbjct: 761 VGEAIDGADGGPLDQGDIYSVVCYESGALEIFDVPNFNCVFTVDKFVSGRTHIVDTYMRE 820
Query: 240 VMSGVQ------QSXXXXXXXXXXXXXXXXXXVCMQKWNDQHGRPFLFAILNDGTVLCYH 79
+ + + MQ+W+ H RPFLFAIL DGT+LCY
Sbjct: 821 ALKDSETEINSSSEEGTGQGRKENIHSMKVVELAMQRWSGHHSRPFLFAILTDGTILCYQ 880
Query: 78 AYLYAGQDNALKTE 37
AYL+ G +N K++
Sbjct: 881 AYLFEGPENTSKSD 894
Score = 79.0 bits (193), Expect = 1e-11
Identities = 45/127 (35%), Positives = 62/127 (48%)
Frame = -1
Query: 2675 MSYAAFKMIHEPTGVENCGVGFITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDAGA 2496
MS+AA+KM+H PTG+ NCG GFIT
Sbjct: 1 MSFAAYKMMHWPTGIANCGSGFITHSRADYVPQIPLIQTEELDSEL-------------- 46
Query: 2495 PPPKNWSAPLPNIVITKANIVEVYSLRLHEDIKRPLPLSSSSSVKRGNVMSGLSGAFLEL 2316
P K P+PN+V+T AN++E+Y +R+ E+ + +S KR +M G+S A LEL
Sbjct: 47 -PSKRGIGPVPNLVVTAANVIEIYVVRVQEEGSK--ESKNSGETKRRVLMDGISAASLEL 103
Query: 2315 ACHLRLH 2295
CH RLH
Sbjct: 104 VCHYRLH 110
>ref|XP_006851814.1| hypothetical protein AMTR_s00041p00037520 [Amborella trichopoda]
gi|548855397|gb|ERN13281.1| hypothetical protein
AMTR_s00041p00037520 [Amborella trichopoda]
Length = 1459
Score = 827 bits (2135), Expect = 0.0
Identities = 429/806 (53%), Positives = 553/806 (68%), Gaps = 22/806 (2%)
Frame = -3
Query: 2352 CHVRSQRRVLRTCLSSQVTPGNEDGCRKRDAIILSFRDAKISVLEFDDSTNALRISSMHY 2173
CH R V + S G++DG RKRD+IIL+F++AKISVLE+DDS + LR SSMH
Sbjct: 111 CHYRLHGNVETMAILSA---GSDDGRRKRDSIILTFKEAKISVLEYDDSLHGLRTSSMHC 167
Query: 2172 FEGPDWWHLKRGREKFARGPLVKSDPQGRCGGVLLYESQVIILQAAEAGSG-VGDDETSV 1996
FEGP+W +LKRGRE FARGPLV DPQGRCGGVL+ +SQ++IL+A++AG G VGDD+ +
Sbjct: 168 FEGPEWQYLKRGRENFARGPLVYVDPQGRCGGVLICDSQMLILKASKAGYGFVGDDDANG 227
Query: 1995 SRRTISAHIELSYAINLHELDMKHVKDFVFIYGYIEPVMVVLHEKEPTWAGSIAWKHHTC 1816
T+S IE SY I+L ELDMKHVKDFVF++GYIEPVMV+LHEKE TWAG ++WKHHTC
Sbjct: 228 PTGTVSIRIESSYVISLRELDMKHVKDFVFVHGYIEPVMVILHEKELTWAGRLSWKHHTC 287
Query: 1815 TISALSISMTSKQHPLIWSANNLPHDAYKXXXXXXXXXXXXXXXXXXLQYHSQSSSCTLA 1636
ISA SIS T KQHPLIWSA+NLPHDAYK + YHSQS SC LA
Sbjct: 288 MISAFSISTTLKQHPLIWSASNLPHDAYKLLSVPSPIGGVLVICANSIHYHSQSMSCALA 347
Query: 1635 LNDFARTVDGRPEIPRANVDVELDSAHVTWISSDTALFSAKTGXXXXXXLVHEGRAVQRL 1456
LNDFA + E+PR+NV+VELD+AH TW+S+D ALFS KTG LV++GR VQRL
Sbjct: 348 LNDFAVAGENSQEMPRSNVNVELDAAHATWLSNDVALFSIKTGELLLLTLVYDGRTVQRL 407
Query: 1455 ELTASRSSTLASCICTVGDAFFFLGSRLGDSLLVQFSCGIGSNTF-SKSSKDEVSDFDVD 1279
EL+ SR+S L S I T+ + FFFLGSRLGDSLLVQF+ G + S+ KDE + + D
Sbjct: 408 ELSKSRASVLTSGITTISNHFFFLGSRLGDSLLVQFNSGASQSILTSRQGKDEGVEIEGD 467
Query: 1278 TPS-KRLRRASSDISQDIMSGEEAVPHNSTSGACDSSQPKAFLYTIRDLLINVGPLRDFA 1102
P+ KRLRRASSD+SQD+ EE + S D +Q K+F + +RD L+NVGPL+DF+
Sbjct: 468 APAAKRLRRASSDVSQDV--NEELSLYVSAPNNLDPAQ-KSFSFAVRDSLLNVGPLKDFS 524
Query: 1101 YGLRANADLKEAGAAKQRNFELVACSGHGKNGSLCVFQQYIRPEQSTEVELEGCKGVWTV 922
YGLR NAD +G AKQ N+ELV+CSGHGKNG+LC+ QQ IRPE TEVEL G KG+WTV
Sbjct: 525 YGLRINADPNASGVAKQSNYELVSCSGHGKNGALCLLQQSIRPELVTEVELTGVKGIWTV 584
Query: 921 YHKXXXXXXXXXXEIVTEESEYHAYIIFSFESQTRVLECADAIGEISSATEFFIKGPTIS 742
YHK ++ E E+HAY+I S ES+T VLE AD +GE++ + +++++G TI
Sbjct: 585 YHKNPRSHSTDSSKVAAEGDEFHAYLIISLESRTMVLETADLLGEVTESVDYYVQGSTIV 644
Query: 741 AGNLFSRRRIIQIYMGGLRLLDGQYMTQELLLGES---IAACADGVVVTNATIIDPYALL 571
AGNLF RRR++QIY+ G R+LDG YMTQ+L G S + ++ V++A+I DPY LL
Sbjct: 645 AGNLFGRRRVVQIYVRGARILDGAYMTQDLPFGHSSTDSTSNSEASTVSSASIADPYVLL 704
Query: 570 MLSDGSLHLVVGDASTLTVSISSPAIFQGSADSITACTLYLDKGPEPWLQKTSTDAWIST 391
+ DGS+ L+ GD +T T++ S PA+F+ +D ITACT Y DKGPEPWL+K S DAW+S+
Sbjct: 705 RMVDGSIQLLTGDPATCTITSSLPAVFENLSDPITACTFYHDKGPEPWLRKASPDAWLSS 764
Query: 390 GAAA-----------QDDIYCVLCRESGRLDIFEIPSFTCVFSVTDFPSGKGILVDTYLA 244
G A Q DIYC++C ESGRL+IF++PSF C+FSV F + + L D +
Sbjct: 765 GVAEALDGSDGSQHDQGDIYCLVCYESGRLEIFDVPSFKCLFSVDRFLTVRTHLFDAHHQ 824
Query: 243 DVMSGVQQ-----SXXXXXXXXXXXXXXXXXXVCMQKWNDQHGRPFLFAILNDGTVLCYH 79
+ + + S +CM +W+ Q+GRPFLFA L DG+ LCYH
Sbjct: 825 ESFKDLHKAKSSYSEDSDQLEKEAVKNMKVVELCMHRWSGQYGRPFLFAGLADGSTLCYH 884
Query: 78 AYLYAGQDNALKTEMGSNGENVLTSA 1
AYLY GQDN K + ++ ENV+ ++
Sbjct: 885 AYLYEGQDNMTKLDDSNSAENVVEAS 910
Score = 80.5 bits (197), Expect = 4e-12
Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Frame = -1
Query: 2675 MSYAAFKMIHEPTGVENCGVGFITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDAGA 2496
MS++AFK++H T VENC G+IT +
Sbjct: 1 MSFSAFKLMHWATAVENCASGYITHSFSDFAASVPAIQNDDPD------------SEWDQ 48
Query: 2495 PPPKNWSAPLPNIVITKANIVEVYSLRLHE-DIKRPLPLSSSSSVKRGNVMSGLSGAFLE 2319
PP K P+PN+VI+ AN++EVY +R+ E D K +SS K G V++G+SGA+LE
Sbjct: 49 PPVKARIGPIPNLVISAANVLEVYVIRVQEEDSKASRHSGASSGSKGGGVVAGVSGAWLE 108
Query: 2318 LACHLRLH 2295
L CH RLH
Sbjct: 109 LVCHYRLH 116
>gb|EXC20897.1| Cleavage and polyadenylation specificity factor subunit 1 [Morus
notabilis]
Length = 1479
Score = 823 bits (2126), Expect = 0.0
Identities = 426/801 (53%), Positives = 549/801 (68%), Gaps = 22/801 (2%)
Frame = -3
Query: 2352 CHVRSQRRVLRTCLSSQVTPGNEDGCRKRDAIILSFRDAKISVLEFDDSTNALRISSMHY 2173
CH R V + S G DG R+RD+IILSF+DAKISVLEFDDS + LR SSMH
Sbjct: 107 CHYRLHGNVQTIAVLSS---GGGDGSRRRDSIILSFQDAKISVLEFDDSIHGLRTSSMHC 163
Query: 2172 FEGPDWWHLKRGREKFARGPLVKSDPQGRCGGVLLYESQVIILQAAEAGSG-VGDDETSV 1996
FEGP+W +LKRGRE FARGPLVK DPQGRC GVL Y Q+I+L+AA+AGSG VG+++
Sbjct: 164 FEGPEWLYLKRGRESFARGPLVKVDPQGRCAGVLAYNIQMIMLKAAQAGSGLVGEEDALG 223
Query: 1995 SRRTISAHIELSYAINLHELDMKHVKDFVFIYGYIEPVMVVLHEKEPTWAGSIAWKHHTC 1816
S +SA IE SY INL +LDMKH+KDFVF++GYIEPVMV+LHE+E TWAG + WKHHTC
Sbjct: 224 SGGAVSARIESSYIINLRDLDMKHIKDFVFVHGYIEPVMVILHERELTWAGRVLWKHHTC 283
Query: 1815 TISALSISMTSKQHPLIWSANNLPHDAYKXXXXXXXXXXXXXXXXXXLQYHSQSSSCTLA 1636
ISALSIS T KQHPLIWSA NLPHDAYK L Y SQS+SCTLA
Sbjct: 284 MISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVICANTLHYQSQSNSCTLA 343
Query: 1635 LNDFARTVDGRPEIPRANVDVELDSAHVTWISSDTALFSAKTGXXXXXXLVHEGRAVQRL 1456
LN +A +VD E+ RA VELD+A+ TW+S+D L S K G LV++GR VQRL
Sbjct: 344 LNSYAVSVDSSQEMRRAPFSVELDAANATWLSNDVVLLSTKAGELLLLTLVYDGRVVQRL 403
Query: 1455 ELTASRSSTLASCICTVGDAFFFLGSRLGDSLLVQFSCGIGSNTFSKSSKDEVSDFDVDT 1276
+L+ S++S L S I T+G++ FFLGSRLGDSLLVQF+ G+G++ S KDEV D + D
Sbjct: 404 DLSKSKASVLTSGITTIGNSLFFLGSRLGDSLLVQFTYGLGTSMLSSGLKDEVGDIEGDA 463
Query: 1275 P-SKRLRRASSDISQDIMSGEEAVPHNSTSGACDSSQPKAFLYTIRDLLINVGPLRDFAY 1099
+KRLRR+SSD+ QD+ SGEE + S +S+Q K+F +T+RD L+NVGPL+DF+Y
Sbjct: 464 HLAKRLRRSSSDVLQDMTSGEELSLYVSAPNNSESTQ-KSFSFTVRDSLVNVGPLKDFSY 522
Query: 1098 GLRANADLKEAGAAKQRNFELVACSGHGKNGSLCVFQQYIRPEQSTEVELEGCKGVWTVY 919
GLR NAD G AKQ N+ELV CSGHGKNG+LCV +Q IRPE TEVEL GCKG+WTVY
Sbjct: 523 GLRINADPNATGVAKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVY 582
Query: 918 HKXXXXXXXXXXEIVTEESEYHAYIIFSFESQTRVLECADAIGEISSATEFFIKGPTISA 739
HK ++V + EYHAY+I S E++T VLE AD + E++ + +++++G TI+A
Sbjct: 583 HK--STRSHDSSKLVAADDEYHAYLIISLEARTMVLETADLLTEVTESVDYYVQGRTIAA 640
Query: 738 GNLFSRRRIIQIYMGGLRLLDGQYMTQELLLGESIAACADG---VVVTNATIIDPYALLM 568
GNLF RRR++Q+Y G R+LDG +MTQ+L G + + + G VVT+ +I DPY +L
Sbjct: 641 GNLFGRRRVVQVYERGARILDGSFMTQDLSFGPAPSESSSGSENAVVTSVSIADPYVVLR 700
Query: 567 LSDGSLHLVVGDASTLTVSISSPAIFQGSADSITACTLYLDKGPEPWLQKTSTDAWISTG 388
+SDGS+ L+VGD ++ TVS+S+PA F+ S I+ACTLY DKGPEPWL+KTSTDAW+STG
Sbjct: 701 MSDGSIRLLVGDPTSCTVSVSTPADFESSKSIISACTLYRDKGPEPWLRKTSTDAWLSTG 760
Query: 387 A-----------AAQDDIYCVLCRESGRLDIFEIPSFTCVFSVTDFPSGKGILVDTYLAD 241
Q DIYCV+C ESG LDI+++PSF VFSV +F SG+ LVD ++ +
Sbjct: 761 VDEAIDGADETLQDQGDIYCVVCYESGSLDIYDVPSFNYVFSVDNFISGRPHLVDAFVQE 820
Query: 240 VMSGVQQS------XXXXXXXXXXXXXXXXXXVCMQKWNDQHGRPFLFAILNDGTVLCYH 79
+Q++ + MQ+W+ +H RPFL IL DG++LCYH
Sbjct: 821 QPKDLQKATNKNSEESAGQGRKENVQNMKIVELAMQRWSGKHSRPFLLGILTDGSILCYH 880
Query: 78 AYLYAGQDNALKTEMGSNGEN 16
AYL+ G ++ +TE + N
Sbjct: 881 AYLFEGPESTSRTEDSVSSRN 901
Score = 83.6 bits (205), Expect = 4e-13
Identities = 46/133 (34%), Positives = 69/133 (51%)
Frame = -1
Query: 2675 MSYAAFKMIHEPTGVENCGVGFITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDAGA 2496
MS+AA+KM+H PTG+ENC GF++ D+
Sbjct: 1 MSFAAYKMMHWPTGIENCAAGFVSHSRADFVPRIPPIQSDDL--------------DSDW 46
Query: 2495 PPPKNWSAPLPNIVITKANIVEVYSLRLHEDIKRPLPLSSSSSVKRGNVMSGLSGAFLEL 2316
P + + P+PN+V+T N++EVY +RL E+ + + S +RG +M GLSGA LEL
Sbjct: 47 PAGRRETGPVPNLVVTAGNVLEVYVVRLQEEDDTRSSRAPAES-RRGGLMDGLSGASLEL 105
Query: 2315 ACHLRLHQEMKMV 2277
CH RLH ++ +
Sbjct: 106 VCHYRLHGNVQTI 118
>ref|XP_006401932.1| hypothetical protein EUTSA_v10012441mg [Eutrema salsugineum]
gi|557103022|gb|ESQ43385.1| hypothetical protein
EUTSA_v10012441mg [Eutrema salsugineum]
Length = 1445
Score = 804 bits (2077), Expect = 0.0
Identities = 418/800 (52%), Positives = 541/800 (67%), Gaps = 18/800 (2%)
Frame = -3
Query: 2352 CHVRSQRRVLRTCLSSQVTP-GNEDGCRKRDAIILSFRDAKISVLEFDDSTNALRISSMH 2176
CH R V S V P G + + RD+I+L+FRDAKISVLEFDDS + LR++SMH
Sbjct: 109 CHYRLHGNVE----SLAVLPMGGGNSSKGRDSIVLTFRDAKISVLEFDDSIHGLRMNSMH 164
Query: 2175 YFEGPDWWHLKRGREKFARGPLVKSDPQGRCGGVLLYESQVIILQAAEAGSG-VGDDETS 1999
FEGPDW HLKRGRE FARGPLVK DPQGRCGGVL+Y Q+IIL+A++AG G VGDD+
Sbjct: 165 CFEGPDWLHLKRGRESFARGPLVKVDPQGRCGGVLVYGLQMIILKASQAGFGLVGDDDPF 224
Query: 1998 VSRRTISAHIELSYAINLHELDMKHVKDFVFIYGYIEPVMVVLHEKEPTWAGSIAWKHHT 1819
S T+SA +E SY INL +L+MKHVKDFVF++GYIEPV+V+L E+E TWAG ++WKHHT
Sbjct: 225 SSGGTVSARVESSYIINLRDLEMKHVKDFVFLHGYIEPVIVILQEEEHTWAGRVSWKHHT 284
Query: 1818 CTISALSISMTSKQHPLIWSANNLPHDAYKXXXXXXXXXXXXXXXXXXLQYHSQSSSCTL 1639
C +SALSI+ T KQHP+IWSA NLPHDAYK + YHSQSSSC L
Sbjct: 285 CMLSALSINTTLKQHPVIWSAINLPHDAYKLLAVPSPIGGVLVLCANTIHYHSQSSSCAL 344
Query: 1638 ALNDFARTVDGRPEIPRANVDVELDSAHVTWISSDTALFSAKTGXXXXXXLVHEGRAVQR 1459
ALN +A + D E+P +N VELD+AH TWIS+D AL S K+G L+++GRAVQR
Sbjct: 345 ALNSYASSADSSQELPASNFSVELDAAHGTWISNDVALLSTKSGELLLLTLIYDGRAVQR 404
Query: 1458 LELTASRSSTLASCICTVGDAFFFLGSRLGDSLLVQFSCGIGSNTFSKSSKDEVSDFDVD 1279
L+L S++S LAS I +VG++ FFLGSRLGDSLLVQFSC G +DE D + +
Sbjct: 405 LDLAKSKASVLASDITSVGNSLFFLGSRLGDSLLVQFSCRTGPAATLPMLRDEDEDIEGE 464
Query: 1278 TPSKRLRRASSDISQDIMSGEEAVPHNSTSGACDSSQPKAFLYTIRDLLINVGPLRDFAY 1099
+ R SSD QD + EE ST DS+Q K+F + +RD L+NVGP++DFAY
Sbjct: 465 GHQAKRLRISSDAFQDTIGNEELSLFGSTPNNSDSAQ-KSFSFAVRDSLVNVGPVKDFAY 523
Query: 1098 GLRANADLKEAGAAKQRNFELVACSGHGKNGSLCVFQQYIRPEQSTEVELEGCKGVWTVY 919
GLR NAD G +KQ N+ELV CSGHGKNG+LCV +Q IRPE TEVEL GC+G+WTVY
Sbjct: 524 GLRINADANATGISKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEVELPGCQGIWTVY 583
Query: 918 HKXXXXXXXXXXEIVTEESEYHAYIIFSFESQTRVLECADAIGEISSATEFFIKGPTISA 739
HK ++ +E EYHAY+I S E++T VLE AD + E++ + +++++G TI+A
Sbjct: 584 HKSSRGHNVDSSKMAVDEDEYHAYLIISLEARTMVLETADLLTEVTESVDYYVQGRTIAA 643
Query: 738 GNLFSRRRIIQIYMGGLRLLDGQYMTQELLLG----ESIAACADGVVVTNATIIDPYALL 571
GNLF RRR+IQ++ G R+LDG +M QEL+ G ES A ++ V+ +I DPY LL
Sbjct: 644 GNLFGRRRVIQVFEHGARILDGTFMNQELIFGAPNSESNPA-SESATVSTVSIADPYVLL 702
Query: 570 MLSDGSLHLVVGDASTLTVSISSPAIFQGSADSITACTLYLDKGPEPWLQKTSTDAWIST 391
++D ++ L+VGD+ST TV++SSP++ +GS ++ACTLY DKGPEPWL+K STDAW+S+
Sbjct: 703 RMTDDTIRLLVGDSSTCTVTVSSPSVLEGSKRKVSACTLYHDKGPEPWLRKASTDAWLSS 762
Query: 390 -----------GAAAQDDIYCVLCRESGRLDIFEIPSFTCVFSVTDFPSGKGILVDTYLA 244
GA Q DIYCVLC ESG L+I+++PSF CVFSV F SG+ L D +
Sbjct: 763 GVGEAVDSADGGAHDQGDIYCVLCYESGALEIYDVPSFNCVFSVDKFSSGRSHLSDMPIH 822
Query: 243 DVMSGVQQ-SXXXXXXXXXXXXXXXXXXVCMQKWNDQHGRPFLFAILNDGTVLCYHAYLY 67
++ +++ S + MQ+W+ H RPFLFA+L DGT+LCYHAYL+
Sbjct: 823 ELEYELEKNSEDNASARNEDIKKTKVVELAMQRWSGHHTRPFLFAVLADGTILCYHAYLF 882
Query: 66 AGQDNALKTEMGSNGENVLT 7
G D K E G + EN T
Sbjct: 883 EGVDGT-KAENGVSLENPAT 901
Score = 88.6 bits (218), Expect = 1e-14
Identities = 50/127 (39%), Positives = 64/127 (50%)
Frame = -1
Query: 2675 MSYAAFKMIHEPTGVENCGVGFITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDAGA 2496
MS+AAFKM+H PTGVENC G+IT +A
Sbjct: 1 MSFAAFKMMHWPTGVENCASGYITHSISDTTTQQIPIVSGDDL-------------EAEW 47
Query: 2495 PPPKNWSAPLPNIVITKANIVEVYSLRLHEDIKRPLPLSSSSSVKRGNVMSGLSGAFLEL 2316
P PK +PN+VIT NI+EVY +R+ E++ + V+RG VM G+SG LEL
Sbjct: 48 PAPKRGIGAVPNVVITAGNILEVYVVRVQEEVNTSQEPRNPKLVRRGGVMEGVSGVSLEL 107
Query: 2315 ACHLRLH 2295
CH RLH
Sbjct: 108 VCHYRLH 114