BLASTX nr result

ID: Ephedra27_contig00012135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00012135
         (684 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24370.1| unknown [Picea sitchensis]                              75   2e-18

>gb|ABK24370.1| unknown [Picea sitchensis]
          Length = 555

 Score = 75.5 bits (184), Expect(2) = 2e-18
 Identities = 35/49 (71%), Positives = 39/49 (79%), Gaps = 2/49 (4%)
 Frame = +1

Query: 493 QNMQDLGICEDEPCCDTFPMSDVDLAFENYEDIFCDPHGDS--LFEDAE 633
           QNMQDLGICED+ CCD F +SDVDL FENYEDIF  P G+S  +FED E
Sbjct: 325 QNMQDLGICEDDDCCDAFHISDVDLIFENYEDIFGGPQGESALMFEDLE 373



 Score = 43.5 bits (101), Expect(2) = 2e-18
 Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 14/117 (11%)
 Frame = +3

Query: 135 KAYEDHQQEPKQNLMIIEQLWDLQKMXXXXXXXXXXXXXXXTILEDQLQV---------- 284
           KA ED QQ+ KQ   +++QL  LQK                  +  Q+QV          
Sbjct: 190 KAREDRQQQSKQKRAVVQQLLALQKSQHQTLTEVQNHEEVHAYVPAQVQVEVQSMESSLS 249

Query: 285 ---EDGLQC-PQLLQNKNCHEQKITNDQQDQRIQNASLFITESERTKSQISNEIGAQ 443
              ED  Q   Q L+ +   +Q+     Q Q++Q+ SL I ESE  KS  + EI  Q
Sbjct: 250 RPLEDDFQIQSQHLERQQKGQQQGKQSLQQQKMQHVSLLIPESEPLKSDTNIEIAIQ 306


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