BLASTX nr result
ID: Ephedra27_contig00011956
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00011956
(1873 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001757939.1| predicted protein [Physcomitrella patens] gi... 477 e-132
ref|XP_002988629.1| hypothetical protein SELMODRAFT_447395 [Sela... 473 e-130
ref|XP_002979319.1| hypothetical protein SELMODRAFT_418944 [Sela... 471 e-130
ref|XP_006837050.1| hypothetical protein AMTR_s00110p00061160 [A... 366 2e-98
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 355 3e-95
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s... 355 3e-95
emb|CBI17549.3| unnamed protein product [Vitis vinifera] 320 1e-84
gb|EMJ03134.1| hypothetical protein PRUPE_ppa002228mg [Prunus pe... 316 2e-83
gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theo... 315 3e-83
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s... 315 3e-83
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr... 309 2e-81
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu... 305 6e-80
gb|EOX91150.1| Transcription regulators,zinc ion binding, putati... 299 2e-78
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora] 298 4e-78
gb|EOX91149.1| Transcription regulators,zinc ion binding, putati... 293 1e-76
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin... 289 3e-75
ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III s... 286 2e-74
ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5... 286 2e-74
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s... 281 5e-73
gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Mor... 281 7e-73
>ref|XP_001757939.1| predicted protein [Physcomitrella patens] gi|162690816|gb|EDQ77181.1|
predicted protein [Physcomitrella patens]
Length = 832
Score = 477 bits (1228), Expect = e-132
Identities = 275/647 (42%), Positives = 394/647 (60%), Gaps = 43/647 (6%)
Frame = -3
Query: 1829 DRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAMD 1650
DRV+REIDV P +DP+T +Y++QYPLRP+WR Y LEERC EVR+KP+Q +FEVDL +D
Sbjct: 184 DRVVREIDVFLTPRVDPETNLYVLQYPLRPYWRPYNLEERCLEVRIKPQQTKFEVDLDID 243
Query: 1649 ENGENYDDNADEYLKISKQTLTSTKAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMTHI 1470
ENYD + +++L+I KQTL S+K + +YAIGILRGN+L+L PVQ VQ RP M +I
Sbjct: 244 TTSENYDQDREQHLQIEKQTLASSKVAMTTSYAIGILRGNRLHLNPVQAVVQFRPSMKYI 303
Query: 1469 AQGLDDIKRSRKAVNMGDDAEKE----KPVEAKPALVSV-----KPETERQEQLRLRSYQ 1317
+ K+S K + D E+E +P E+K L + + ETERQE RL+S+
Sbjct: 304 DEYDAAKKKSNKEAGIADGDEEELFDAEPPESKTELTLLQVNVRRRETERQEATRLQSHA 363
Query: 1316 HFKKLEEEEPWIVLEPYGPDNSVTNELLEKLVTVEDCEIPFNMNSHHYIDALVPGRTSTT 1137
+ K+L+E E WI LEP+G D+ +T + +K+VT I FN++ Y++ LVPGR ST+
Sbjct: 364 YLKQLDEAEAWIPLEPHGTDSPITEGIRQKMVTSTQDRINFNLSPDAYLNTLVPGRASTS 423
Query: 1136 SNHQLHGDHTGNAGLSRSYLDSLKLQD-RIKAIFSQKRIQVFRFESLMRFA-SGHSTEEV 963
+ L D +GN G+SRS+L++L L + R + + R+QV +FE LM+ A +G S EE+
Sbjct: 424 TAGSLIEDGSGNVGISRSHLETLVLPEVRFEYLLRVSRVQVLQFERLMKMAPAGCSDEEL 483
Query: 962 LNVVKTYAFLVQGCWVPASIF--HYRGDLCLVRDYVLLLFSKNKNIHYEQLEELGLPKER 789
LNV+ +A LVQGCWV AS YRG L +RDY+L LFSKN+ + +EQL L L K
Sbjct: 484 LNVLSNFAVLVQGCWVAASHIRPEYRGGLRAMRDYILFLFSKNRVVKHEQLRGLPLTKGA 543
Query: 788 VREVLSYIADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQA 609
+RE++ IA Q+ G W F+E+TDK+FI+ +Q + KEQ QW+ +E I A + +
Sbjct: 544 LREIMVPIAVQRAGVG-WEFQEDTDKSFIKKHQSVVKEQTAQWVNSEPGIVGALVEMNPS 602
Query: 608 ---LHGIQAS---------NISSGES-------------LDQLKRSAVNGTGELNKKANM 504
+HG + S N SG+ +++ + GE +
Sbjct: 603 FPEVHGFEPSETFEGNKKLNTKSGKQGNSSLVSHSPKPPSGKIQGNKAGPLGEAGPSGDG 662
Query: 503 KEKLQLDG---STMSQESRTSLALALREILSS-HVCNLKEIRQSLQNLAKVKGTA-GNKK 339
+K ++ TMS E+R +L AL+EI + HVC ++ I QSL+++A + A N K
Sbjct: 663 HDKSNVENGAQGTMSDETRMALPGALKEIFAKHHVCTMQIIVQSLRDMAIERTVANSNPK 722
Query: 338 EAVKGMAAAKGATAPLGELTSVIDQVASNINGVYFLKSLGNPTIDAYRNVVVKLIRAKGP 159
A +AAAK A AP ELT+ + +VA+NI GVYFL +L NP +D +R VV+ L+R GP
Sbjct: 723 SAAAAVAAAKAANAPASELTAAVCRVATNIGGVYFLTTLNNPALDPFREVVIALLRKMGP 782
Query: 158 GAIIRKVEVFEACKLEVGDPSPQIYSKIMKELCTSKGGGWVLKTGDG 18
A +RK ++ A K + Y K+MKELC ++G W LK GDG
Sbjct: 783 DAGLRKNDILLAFKSAGREAPSATYLKVMKELCYTRGAAWYLKPGDG 829
>ref|XP_002988629.1| hypothetical protein SELMODRAFT_447395 [Selaginella moellendorffii]
gi|300143736|gb|EFJ10425.1| hypothetical protein
SELMODRAFT_447395 [Selaginella moellendorffii]
Length = 625
Score = 473 bits (1216), Expect = e-130
Identities = 273/618 (44%), Positives = 386/618 (62%), Gaps = 14/618 (2%)
Frame = -3
Query: 1829 DRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAMD 1650
D V+REI+V P DPDTK Y++QYPLRP+WR Y LE+RC+ VRVK + + EVDL +D
Sbjct: 25 DTVVREIEVHITPTADPDTKFYLLQYPLRPYWRPYELEQRCEAVRVKHQHQKLEVDLQVD 84
Query: 1649 ENGENYDDNADEYLKISKQTLTSTKAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMTHI 1470
G+NYDD AD++L+I+KQTLTST+ L+ YAIGIL+GNKL+L P+ VQLRP ++++
Sbjct: 85 RFGDNYDDAADDHLRIAKQTLTSTQGNLSTNYAIGILQGNKLHLNPLHAIVQLRPSLSYL 144
Query: 1469 AQGLDDIKRSRKAVNMGD---DAEKEKPVEAKPALVSV-----KPETERQEQLRLRSYQH 1314
+ + K++ V D DAE+ E KP V+ K ETERQ+Q RL SY H
Sbjct: 145 NEADEQKKKNITRVESDDEMPDAEEGAATEKKPEPVAFKVEIKKQETERQQQSRLMSYAH 204
Query: 1313 FKKLEEEEPWIVLEPYGPDNSVTNELLEKLVTVEDCEIPFNMNSHHYIDALVPGRT-STT 1137
K+LEE E WI LEP+G D+ VT E+ K+ + + I F+M+ + Y+ LVPGR S
Sbjct: 205 LKQLEEAEAWITLEPHGLDSPVTKEIKMKMKSSANNLIRFDMSRNEYMKKLVPGRAPSAA 264
Query: 1136 SNHQLHGDHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFA-SGHSTEEVL 960
++ + G G LS+SYLD+L L R+ A+ SQ R+ V +FE LM+ A +G + EEVL
Sbjct: 265 ASQAVPG--LGKEPLSKSYLDTLPLDKRLHAVLSQGRVHVLQFERLMKLAPAGCTEEEVL 322
Query: 959 NVVKTYAFLVQGCWVPASIFHYRGDLCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVRE 780
+V++ A+LVQGCWV S Y G C +RDY+LL F KN+ + E LE+L + KE +RE
Sbjct: 323 DVLQKTAYLVQGCWVATSNMRYTGGRCAIRDYILLQFVKNRVVSRETLEQLRVSKEILRE 382
Query: 779 VLSYIADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHG 600
+L +A Q + G W F E TDKTFI+ + I K+Q ++W E I A +++Q
Sbjct: 383 ILVPLAVQNIKTGGWEFIESTDKTFIKRHNSIAKDQLQRWTAGEKLISDRALAVQQ---- 438
Query: 599 IQASNISSGESLDQLKRSAVNGTGELNKKANMKEKLQLDGSTMSQESRTSLALALREI-L 423
+ SG+++ S + + + + + S+M+ E+ +L AL +I L
Sbjct: 439 -----MGSGKAMGAKPGSGLAASTGIPPRPS-------TSSSMAPETLAALPDALTQIFL 486
Query: 422 SSHVCNLKEIRQSLQNLAKVKGTAGNKK--EAVKGMAAAKGATAPLGELTSVIDQVASNI 249
HVC L+ I L+ A K A N K E +AAAKGA+AP+ ELT+++D +A+NI
Sbjct: 487 KHHVCTLQFICHCLRESAITKSQADNVKVEEKASAVAAAKGASAPVAELTAIVDTIATNI 546
Query: 248 NGVYFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLEVGD-PSPQIYSKIM 72
NGVYFL LG+PT D +R VV+ L++ K G +++ E+ EA KL + PS Q+Y KIM
Sbjct: 547 NGVYFLTQLGDPTQDPFREVVIALLKQKSAG--LQRSEIMEAFKLALRKMPSNQLYQKIM 604
Query: 71 KELCTSKGGGWVLKTGDG 18
KELC ++G WVLKTGDG
Sbjct: 605 KELCYTRGATWVLKTGDG 622
>ref|XP_002979319.1| hypothetical protein SELMODRAFT_418944 [Selaginella moellendorffii]
gi|300153087|gb|EFJ19727.1| hypothetical protein
SELMODRAFT_418944 [Selaginella moellendorffii]
Length = 625
Score = 471 bits (1213), Expect = e-130
Identities = 272/618 (44%), Positives = 386/618 (62%), Gaps = 14/618 (2%)
Frame = -3
Query: 1829 DRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAMD 1650
D V+REI+V P DPDTK Y++QYPLRP+WR Y LE+RC+ VRVK + + EVDL +D
Sbjct: 25 DTVVREIEVHITPTADPDTKFYLLQYPLRPYWRPYELEQRCEAVRVKHQHQKLEVDLQVD 84
Query: 1649 ENGENYDDNADEYLKISKQTLTSTKAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMTHI 1470
G+NYDD AD++L+I+KQTLTST+ L+ YAIGIL+GNKL+L P+ VQLRP ++++
Sbjct: 85 RFGDNYDDAADDHLRIAKQTLTSTQGNLSTNYAIGILQGNKLHLNPLHAIVQLRPSLSYL 144
Query: 1469 AQGLDDIKRSRKAVNMGD---DAEKEKPVEAKPALVSV-----KPETERQEQLRLRSYQH 1314
+ + K++ V D DAE+ E KP V+ K ETERQ+Q RL SY H
Sbjct: 145 NEADEQKKKNITRVESDDEMPDAEEGAATEKKPEPVAFKVEIKKQETERQQQSRLMSYAH 204
Query: 1313 FKKLEEEEPWIVLEPYGPDNSVTNELLEKLVTVEDCEIPFNMNSHHYIDALVPGRT-STT 1137
K+LEE E WI LEP+G D+ VT E+ K+ + + I F+M+ + Y+ LVPGR S
Sbjct: 205 LKQLEEAEAWITLEPHGLDSPVTKEIKMKMKSSANNLIRFDMSRNEYMKKLVPGRAPSAA 264
Query: 1136 SNHQLHGDHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFA-SGHSTEEVL 960
++ + G G LS+SYLD+L L R+ A+ SQ R+ V +FE LM+ A +G + EEVL
Sbjct: 265 ASQAVPG--LGKEPLSKSYLDTLPLDKRLHAVLSQGRVHVLQFERLMKLAPAGCTEEEVL 322
Query: 959 NVVKTYAFLVQGCWVPASIFHYRGDLCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVRE 780
+V++ A+LVQGCWV S Y G C +RDY+LL F KN+ + E LE+L + KE +RE
Sbjct: 323 DVLQKTAYLVQGCWVATSNMRYTGGRCAIRDYILLQFVKNRVVSRETLEQLRVSKEILRE 382
Query: 779 VLSYIADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHG 600
+L +A Q + G W F E TDKTFI+ + I K+Q ++W + I A +++Q
Sbjct: 383 ILVPLAVQNIKTGGWEFIESTDKTFIKRHNSIAKDQLQRWTAGDKLISDRALAVQQ---- 438
Query: 599 IQASNISSGESLDQLKRSAVNGTGELNKKANMKEKLQLDGSTMSQESRTSLALALREI-L 423
+ SG+++ S + + + + + S+M+ E+ +L AL +I L
Sbjct: 439 -----MGSGKAMGAKPGSGLAASTGIPPRPS-------TSSSMAPETLAALPDALTQIFL 486
Query: 422 SSHVCNLKEIRQSLQNLAKVKGTAGNKK--EAVKGMAAAKGATAPLGELTSVIDQVASNI 249
HVC L+ I L+ A K A N K E +AAAKGA+AP+ ELT+++D +A+NI
Sbjct: 487 KHHVCTLQFICHCLRESAITKSQADNVKVEEKASAVAAAKGASAPVAELTAIVDTIATNI 546
Query: 248 NGVYFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLEVGD-PSPQIYSKIM 72
NGVYFL LG+PT D +R VV+ L++ K G +++ E+ EA KL + PS Q+Y KIM
Sbjct: 547 NGVYFLTQLGDPTQDPFREVVIALLKQKSAG--LQRSEIMEAFKLALRKMPSNQLYQKIM 604
Query: 71 KELCTSKGGGWVLKTGDG 18
KELC ++G WVLKTGDG
Sbjct: 605 KELCYTRGATWVLKTGDG 622
>ref|XP_006837050.1| hypothetical protein AMTR_s00110p00061160 [Amborella trichopoda]
gi|548839643|gb|ERM99903.1| hypothetical protein
AMTR_s00110p00061160 [Amborella trichopoda]
Length = 763
Score = 366 bits (940), Expect = 2e-98
Identities = 226/618 (36%), Positives = 348/618 (56%), Gaps = 13/618 (2%)
Frame = -3
Query: 1832 EDRVIREIDVCFRPH-IDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLA 1656
EDR++R ID+ P IDPDT++Y+ QYPLR WR Y +ERCQEVR++PKQ + E DL
Sbjct: 162 EDRLVRTIDLFLVPSPIDPDTQLYINQYPLRACWRPYEFDERCQEVRIRPKQSKVEFDLT 221
Query: 1655 MDENGENYDDNADEYLKISKQTLTSTKAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMT 1476
+D+ YD N D+ ++I+KQTLTS +A LA Y +GIL G+KL L VQ +QLRP M
Sbjct: 222 VDDKSPYYDPNTDDDMRITKQTLTSMEASLATGYGVGILSGSKLFLNRVQAVLQLRPSMD 281
Query: 1475 HIAQGLDDIKR--SRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKL 1302
H+ + D ++ SR + +K K P+ + E ++ R
Sbjct: 282 HLKKSAQDSRKNDSRTSEEPTTSNKKSKQESVGPSKIQATDEGQKASTSR---------E 332
Query: 1301 EEEEPWIVLEPYGPDNSVTNELLEKLVTVEDCEIPFNMNSHHYIDALVPGRTSTTSNHQL 1122
+E EPWI LE +G ++ + +K+VT E+ + M+ +HYI + +PGR S
Sbjct: 333 DEPEPWITLEYHGMESPTRDYFWQKMVTEENSQQQLFMSVNHYITSWIPGRDSAPLERAC 392
Query: 1121 --HGDHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFAS-GHSTEEVLNVV 951
HG ++ LS D+L L++ IK + S+ + ++ FE LMR A G + +EVL V+
Sbjct: 393 INHGRGASDSSLS----DALSLEEHIKLLLSKGQNEILPFEILMRHAPVGLTEQEVLKVL 448
Query: 950 KTYAFLVQGCWVPASIFHYRGDLCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVRE-VL 774
+ +A LVQG WVP S Y + C VRDY+LLLF K + I +++++ L K + E V+
Sbjct: 449 QKHAHLVQGYWVPKSPLRYEAEYCKVRDYILLLFHKERVIQHDEVKGLLSWKTEIFEKVM 508
Query: 773 SYIADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHGIQ 594
+ + + + W F+ T K+F+++++ + ++Q+ WL E + + +K +
Sbjct: 509 NPLGSRNRELKRWEFKLPTQKSFLQSHENVVEDQSRLWLSLEKHLMDSLPWLKN-----K 563
Query: 593 ASNISSGESLDQLKRSAV---NGTGELNKKANMKEKLQLDGSTMSQESRTSLALALREIL 423
ASN ++ S+V +G G+ K+ + S MS+E R +++ ALR++
Sbjct: 564 ASNSRVSSKINTKGSSSVAPLSGRGDQPAKSVADGAQISERSIMSEEVREAISDALRDVF 623
Query: 422 SS-HVCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAPLGELTSVIDQVASNIN 246
HVC+L +R L++L K V AAA GA A EL S +++VA NI+
Sbjct: 624 KKYHVCSLPMLRSGLRDLGISKSVTPKAATRV-AAAAAHGAAASDAELLSHVNKVAVNIH 682
Query: 245 GVYFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLEVG--DPSPQIYSKIM 72
GVY LKSL NP +D R VV+ L+ A P A ++KVEV +A K++ D P +Y +++
Sbjct: 683 GVYALKSLSNPLLDPLREVVISLLCASKPKAKLKKVEVMQAFKIKFNKEDVPPNVYKQVL 742
Query: 71 KELCTSKGGGWVLKTGDG 18
ELC S+ GGWVLK+GDG
Sbjct: 743 TELCVSQAGGWVLKSGDG 760
>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit RPC5-like [Cucumis sativus]
Length = 702
Score = 355 bits (912), Expect = 3e-95
Identities = 228/616 (37%), Positives = 339/616 (55%), Gaps = 11/616 (1%)
Frame = -3
Query: 1832 EDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAM 1653
ED V+REIDV F P +D ++K+Y++QYPLRP WR Y E RC EVRVKP EVDL +
Sbjct: 117 EDMVVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNV 176
Query: 1652 DENGENYDDNADEYLKISKQTLTST-KAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMT 1476
D NYD+ AD ++ KQTLTS+ + LA +YA+G+L GNKL+L PV VQLRP
Sbjct: 177 DIESNNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFE 236
Query: 1475 HIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLEE 1296
H+ G K + V D + E+ V+ A S K + + + K +
Sbjct: 237 HLNSGGPKRKNN---VRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEV-------KTRD 286
Query: 1295 EEPWIVLEPYGPDNSVTNELLEKLVTVEDCEIPFNMNSHHYIDALVPGRTSTTSNHQLHG 1116
EE WI L+ YG ++ ++ L+ +V+ + F+M+ H Y+D+L PG TST+ N
Sbjct: 287 EECWIPLKYYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPG-TSTSGNKP--- 342
Query: 1115 DHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYAF 936
G S+ YL SL L++RIK + ++ V RF +L +A + TEE + ++ YA
Sbjct: 343 -----KGPSKKYLLSLSLEERIKKLLTEGP-PVQRFSALKHYAPDYETEEFIETLQQYAQ 396
Query: 935 LVQGCWVPASIF--HYRGDLCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVREVLSYIA 762
LVQG WVP S+F G RD+VL LFSKN + Q+ ++RV+ L+
Sbjct: 397 LVQGLWVPKSLFLIPQDGSGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFG 456
Query: 761 DQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHGIQASNI 582
++P W F+E+TD+ F+ N+ I ++Q E W E F+ +++ + +N
Sbjct: 457 VERPAFKDWKFKEKTDRLFLSNHVRIAEKQEELWNNVE-----KGFTFLRSIKSVHHANA 511
Query: 581 SSGE-----SLDQLKRSAVNGTGELNKKANMKEKLQLDGSTMSQESRTSLALALREILSS 417
++G+ L++ S T N N K MS E+R +L AL+++ +
Sbjct: 512 ATGKPGVVPKLEKQVSSDQTTTKSSNAPLNRK-------GAMSDETREALPKALQKLFQN 564
Query: 416 H-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAPLGELTSVIDQVASNINGV 240
H VC+ + I Q L++LA + T K +A +AAA G AP EL +I QVA+ I+G+
Sbjct: 565 HKVCSFQLICQGLRDLAVSQSTL-PKADARMAVAAAYGVDAPPDELXKIISQVATEIHGL 623
Query: 239 YFL-KSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLEVGDP-SPQIYSKIMKE 66
Y L S +P D R VV++L+R +GP A+++K +V EA K E+G + YSK+M E
Sbjct: 624 YVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADVLEASKHELGRAINSNEYSKVMNE 683
Query: 65 LCTSKGGGWVLKTGDG 18
+C S G W LK+GDG
Sbjct: 684 ICISHGSSWTLKSGDG 699
>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Cucumis
sativus]
Length = 702
Score = 355 bits (912), Expect = 3e-95
Identities = 228/616 (37%), Positives = 339/616 (55%), Gaps = 11/616 (1%)
Frame = -3
Query: 1832 EDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAM 1653
ED V+REIDV F P +D ++K+Y++QYPLRP WR Y E RC EVRVKP EVDL +
Sbjct: 117 EDMVVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNV 176
Query: 1652 DENGENYDDNADEYLKISKQTLTST-KAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMT 1476
D NYD+ AD ++ KQTLTS+ + LA +YA+G+L GNKL+L PV VQLRP
Sbjct: 177 DIESNNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFE 236
Query: 1475 HIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLEE 1296
H+ G K + V D + E+ V+ A S K + + + K +
Sbjct: 237 HLNSGGPKRKNN---VRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEV-------KTRD 286
Query: 1295 EEPWIVLEPYGPDNSVTNELLEKLVTVEDCEIPFNMNSHHYIDALVPGRTSTTSNHQLHG 1116
EE WI L+ YG ++ ++ L+ +V+ + F+M+ H Y+D+L PG TST+ N
Sbjct: 287 EECWIPLKYYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPG-TSTSGNKP--- 342
Query: 1115 DHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYAF 936
G S+ YL SL L++RIK + ++ V RF +L +A + TEE + ++ YA
Sbjct: 343 -----KGPSKKYLLSLSLEERIKKLLTEGP-PVQRFSALKHYAPDYETEEFIETLQQYAQ 396
Query: 935 LVQGCWVPASIF--HYRGDLCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVREVLSYIA 762
LVQG WVP S+F G RD+VL LFSKN + Q+ ++RV+ L+
Sbjct: 397 LVQGLWVPKSLFLIPQDGSGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFG 456
Query: 761 DQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHGIQASNI 582
++P W F+E+TD+ F+ N+ I ++Q E W E F+ +++ + +N
Sbjct: 457 VERPAFKDWKFKEKTDRLFLSNHVRIAEKQEELWNNVE-----KGFTFLRSIKSVHHANA 511
Query: 581 SSGE-----SLDQLKRSAVNGTGELNKKANMKEKLQLDGSTMSQESRTSLALALREILSS 417
++G+ L++ S T N N K MS E+R +L AL+++ +
Sbjct: 512 ATGKPGVVPKLEKQVSSDQTTTKSSNAPLNRK-------GAMSDETREALPKALQKLFQN 564
Query: 416 H-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAPLGELTSVIDQVASNINGV 240
H VC+ + I Q L++LA + T K +A +AAA G AP EL +I QVA+ I+G+
Sbjct: 565 HKVCSFQLICQGLRDLAVSQSTL-PKADARMAVAAAYGVDAPPDELKKIISQVATEIHGL 623
Query: 239 YFL-KSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLEVGDP-SPQIYSKIMKE 66
Y L S +P D R VV++L+R +GP A+++K +V EA K E+G + YSK+M E
Sbjct: 624 YVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADVLEASKHELGRAINSNEYSKVMNE 683
Query: 65 LCTSKGGGWVLKTGDG 18
+C S G W LK+GDG
Sbjct: 684 ICISHGSSWTLKSGDG 699
>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 320 bits (821), Expect = 1e-84
Identities = 213/615 (34%), Positives = 327/615 (53%), Gaps = 10/615 (1%)
Frame = -3
Query: 1832 EDRVIREIDVCFRPH-IDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLA 1656
ED V+REIDV F P D +TK+Y++QYPLRP+WR Y L ERC EVRVKP EVDL+
Sbjct: 99 EDPVVREIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLS 158
Query: 1655 MDENGENYDDNADEYLKISKQTL-TSTKAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLM 1479
+D + +NYD +A ++ KQTL TS K Y +G+L GNKL+L P+ VQLRP M
Sbjct: 159 IDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSM 218
Query: 1478 THIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLE 1299
+++ G KR + A K + + ++ S+K +Q ++ + +
Sbjct: 219 EYLSSG--GAKRKNNVTGDTNSAVKLEVSNEEESVGSLK------KQNKIMGILDEQNTD 270
Query: 1298 EEEPWIVLEPYGPDNSVTNELLEKLVTVEDCEIPFNMNSHHYIDALVPGRTSTTSNHQLH 1119
E W+ L+ + ++ + L+K+V ++ I F M+ + Y+++L P S N
Sbjct: 271 AAESWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNR--- 327
Query: 1118 GDHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYA 939
+ GLSR +L S+ L++R K + + V RF +L FA +S E+VL V+ +A
Sbjct: 328 -----SKGLSRRFLLSMPLEERFKTLLCEGP-PVHRFSALKHFAPDNSVEDVLGVLTKHA 381
Query: 938 FLVQGCWVPASIFHY---RGDLCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVREVLSY 768
LVQG WVP S + +G L RDY+LLLFSK I+Y Q++ G + ++ LS
Sbjct: 382 HLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSI 441
Query: 767 IADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHGIQAS 588
+A ++P W F+E TD +F++ + I +EQ W E KQ I
Sbjct: 442 LAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLE----------KQITDIIHGG 491
Query: 587 NISSGESLDQLKRSAVNGTGELNKK---ANMKEKLQLDGSTMSQESRTSLALALREILSS 417
+ + K S N TG K + + MS E+R +L AL E+
Sbjct: 492 GRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRTAMSAETREALPKALEEVFRL 551
Query: 416 H-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAPLGELTSVIDQVASNINGV 240
H VC+ + I Q+L++LA K T+ K + +AAA GA AP EL ++I + A+ ++GV
Sbjct: 552 HKVCSFQLICQALRDLAVSKSTS-PKVDPRTFVAAAYGADAPQEELHAIISKYATTVHGV 610
Query: 239 YFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLEV-GDPSPQIYSKIMKEL 63
Y K+ + + R VVV L K P A +++ ++ EA K+ + + + Y+K++ EL
Sbjct: 611 YVWKTSEHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSEL 670
Query: 62 CTSKGGGWVLKTGDG 18
C S+G WVLK+GDG
Sbjct: 671 CESRGSLWVLKSGDG 685
>gb|EMJ03134.1| hypothetical protein PRUPE_ppa002228mg [Prunus persica]
Length = 698
Score = 316 bits (810), Expect = 2e-83
Identities = 215/626 (34%), Positives = 340/626 (54%), Gaps = 21/626 (3%)
Frame = -3
Query: 1832 EDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAM 1653
ED ++REIDV F PHID ++++Y++QYPLRP WR Y LE RC+EVR+KP E+DL++
Sbjct: 107 EDTIVREIDVFFNPHIDDNSQLYVLQYPLRPWWRPYELENRCEEVRLKPATSEMEIDLSL 166
Query: 1652 DENGENYDDNADEYLKISKQTLTST---KAQLAAAYAIGILRGNKLNLTPVQEAVQLRPL 1482
+ + +NYD++ LK++KQTL +T YA+G+L G+KL+L P+ + VQLRP
Sbjct: 167 NLDPKNYDEDCGNRLKMTKQTLYTTWKPTRTTGTGYAVGVLMGDKLHLNPIDKVVQLRPS 226
Query: 1481 MTHIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKL 1302
+ H+ G SR+ ++ DAE + +E S P ++ +++ + KK
Sbjct: 227 LEHLKSG-----SSRRKNSVTGDAEVKVKLEESRQETSSGPSKKQTKRMESSTE---KKT 278
Query: 1301 EEEEPWIVLEPYGPDNSVTNELLEKLVTVEDCEIPFNMNSHHYIDALVPGRTSTTSNHQL 1122
E+EE W+ L+ + ++ + + L ++V E I F M+ + Y+++L P RT
Sbjct: 279 EDEESWVPLQYHSSESDFSAKYLRRMVGQESSPIQFTMSPYDYVNSLCP-RTC------- 330
Query: 1121 HGDHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMR-FASGHSTEEVLNVVKT 945
G SR +L SL L++RIK + ++ + RF L + FA H+ EE+L+V++
Sbjct: 331 -------KGSSRRFLLSLPLEERIKKLLVEEPL-ARRFSDLKKYFAPDHTGEELLDVLQK 382
Query: 944 YAFLV--QGCWVPASIFHY-------RGDLC--LVRDYVLLLFSKNKNIHYEQLEELGLP 798
+A L+ G WVP ++ Y R + R+YVL LF KN I QL
Sbjct: 383 HAQLLLDSGLWVPKTLLLYPSKDMKDRDHVARQTARNYVLNLFRKNTVISNSQLNLPQNH 442
Query: 797 KERVREVLSYIADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSI 618
K E L +A +P W +E++DK+F IFK Q + W + E+ + A +
Sbjct: 443 KNHAYESLKILAVSRPSSQDWKLKEQSDKSFKELYPDIFKSQEQNWERMEEKLVNAFKA- 501
Query: 617 KQALHGIQASNISS--GESLDQLKRSAVNGTGELNKKANMKEKLQLDGSTMSQESRTSLA 444
G++ + ++S G+SL+ K + + + +Q+ G TMS E+R +L
Sbjct: 502 -HTDRGVKNACMTSKPGKSLNSDKGTTKSAS-----------DVQIGGRTMSDETRAALP 549
Query: 443 LALREILSSH-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMA-AAKGATAPLGELTSVI 270
A++E+L H VCN + I + L+ LA K + K + AA G AP EL VI
Sbjct: 550 EAIKEVLHEHKVCNFRLICEGLRRLAVRKSSLPKVDPKTKRVIDAAYGVDAPQHELQKVI 609
Query: 269 DQVASNINGVYFLKSL-GNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLEV-GDPS 96
QVA++I+G+Y LKS + D R VV+ L+ KGP A +++ EVFEA K+ + D +
Sbjct: 610 CQVAADIHGLYVLKSSPEHSEHDRLRKVVIDLLCTKGPNAKLKRGEVFEAAKIALERDIN 669
Query: 95 PQIYSKIMKELCTSKGGGWVLKTGDG 18
Y+K+M + C KG W+LK+GDG
Sbjct: 670 TNEYNKVMNDFCVFKGSAWILKSGDG 695
>gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
Length = 700
Score = 315 bits (808), Expect = 3e-83
Identities = 212/613 (34%), Positives = 323/613 (52%), Gaps = 8/613 (1%)
Frame = -3
Query: 1832 EDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAM 1653
ED V+REIDV F P ID +T++Y++QYPLRP WR Y L+ERC+EVRVKP E+DLA+
Sbjct: 118 EDMVVREIDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAV 177
Query: 1652 DENGENYDDNADEYLKISKQTLTST-KAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMT 1476
D + NYD LK++KQTL+S+ YA+G+L G+KL+L P+ VQLRP M
Sbjct: 178 DVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMC 237
Query: 1475 HIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLEE 1296
H+ + +++ A + + E+P + K A S K Q +K ++
Sbjct: 238 HLKPSVSK-RKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTE-------QKADD 289
Query: 1295 EEPWIVLEPYGPDNSVTNELLEKLVTVEDCEIPFNMNSHHYIDALVPGRTSTTSNHQLHG 1116
+E W+ L+ + N + + L++++ E C I F M+ + Y+D+L PG ++N++ G
Sbjct: 290 KECWVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPG---ASNNNKAQG 346
Query: 1115 DHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYAF 936
SR L S+ L++R+K + S+ RF +L FA S E++ V++ +A
Sbjct: 347 P-------SRRLLLSIPLEERLKKLLSEGP-PFHRFSALKHFAPDASIEDIFEVLQKHAL 398
Query: 935 LVQGCWVPASIFHYRGD--LCLVRDYVLLLFSKNKNIHYEQLEELG-LPKERVREVLSYI 765
LVQG WVP S + D L RDYVLLLFSKN I Q+ L KE V+ L +
Sbjct: 399 LVQGLWVPKSSLLFPEDPYKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKIL 458
Query: 764 ADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHGIQASN 585
A ++P W +E D+ F + I K Q + W ED + I G +
Sbjct: 459 AIERPSFKDWKLKENADEGFKKLYPDIVKNQEQIWRAGEDNV------INHICRGAKGGP 512
Query: 584 ISSGESLDQLKRSAVNGTGELNKKANMKEKLQLDGSTMSQESRTSLALALREILSSH-VC 408
+ A+N + + A + G TMS E+R ++ AL+++ +H VC
Sbjct: 513 SRTKPGTVIKPEKAMNSDKGVRRVAPAVQA----GRTMSDETREAIPKALKKVFQTHKVC 568
Query: 407 NLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAPLGELTSVIDQVASNINGVYFL- 231
+L+ IR+ L++LA + T K +A + AA GA AP EL V+ +VA ++G F+
Sbjct: 569 SLQLIRKGLRDLALSQSTL-PKADARMVVKAAYGADAPEHELQEVVSEVAVELHGGLFVL 627
Query: 230 -KSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLEV-GDPSPQIYSKIMKELCT 57
S +P D R VV+ L+R KG ++K +V A L + + S Y+K+M + C
Sbjct: 628 RSSPEHPEYDPLREVVINLLRVKGK---LKKADVSAAALLSLKREISNNEYNKVMSDFCE 684
Query: 56 SKGGGWVLKTGDG 18
K WVLK+GDG
Sbjct: 685 YKSSWWVLKSGDG 697
>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
vinifera]
Length = 672
Score = 315 bits (808), Expect = 3e-83
Identities = 214/615 (34%), Positives = 325/615 (52%), Gaps = 10/615 (1%)
Frame = -3
Query: 1832 EDRVIREIDVCFRPH-IDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLA 1656
ED V+REIDV F P D +TK+Y++QYPLRP+WR Y L ERC EVRVKP EVDL+
Sbjct: 99 EDPVVREIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLS 158
Query: 1655 MDENGENYDDNADEYLKISKQTL-TSTKAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLM 1479
+D + +NYD +A ++ KQTL TS K Y +G+L GNKL+L P+ VQLRP M
Sbjct: 159 IDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSM 218
Query: 1478 THIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLE 1299
+++ G +++ N+ D +VK E +E+ S KK
Sbjct: 219 EYLSSG-----GAKRKNNVTGDTNS-----------AVKLEVSNEEE----SVGSLKK-- 256
Query: 1298 EEEPWIVLEPYGPDNSVTNELLEKLVTVEDCEIPFNMNSHHYIDALVPGRTSTTSNHQLH 1119
+ W+ L+ + ++ + L+K+V ++ I F M+ + Y+++L P S N
Sbjct: 257 --QSWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNR--- 311
Query: 1118 GDHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYA 939
+ GLSR +L S+ L++R K + + V RF +L FA +S E+VL V+ +A
Sbjct: 312 -----SKGLSRRFLLSMPLEERFKTLLCEGP-PVHRFSALKHFAPDNSVEDVLGVLTKHA 365
Query: 938 FLVQGCWVPASIFHY---RGDLCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVREVLSY 768
LVQG WVP S + +G L RDY+LLLFSK I+Y Q++ G + ++ LS
Sbjct: 366 HLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSI 425
Query: 767 IADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHGIQAS 588
+A ++P W F+E TD +F++ + I +EQ W E KQ I
Sbjct: 426 LAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLE----------KQITDIIHGG 475
Query: 587 NISSGESLDQLKRSAVNGTGELNKK---ANMKEKLQLDGSTMSQESRTSLALALREILSS 417
+ + K S N TG K + + MS E+R +L AL E+
Sbjct: 476 GRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRTAMSAETREALPKALEEVFRL 535
Query: 416 H-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAPLGELTSVIDQVASNINGV 240
H VC+ + I Q+L++LA K T+ K + +AAA GA AP EL ++I + A+ ++GV
Sbjct: 536 HKVCSFQLICQALRDLAVSKSTS-PKVDPRTFVAAAYGADAPQEELHAIISKYATTVHGV 594
Query: 239 YFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLEV-GDPSPQIYSKIMKEL 63
Y K+ + + R VVV L K P A +++ ++ EA K+ + + + Y+K++ EL
Sbjct: 595 YVWKTSEHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSEL 654
Query: 62 CTSKGGGWVLKTGDG 18
C S+G WVLK+GDG
Sbjct: 655 CESRGSLWVLKSGDG 669
>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC5-like [Citrus sinensis]
gi|557527707|gb|ESR38957.1| hypothetical protein
CICLE_v10025048mg [Citrus clementina]
Length = 690
Score = 309 bits (792), Expect = 2e-81
Identities = 206/613 (33%), Positives = 316/613 (51%), Gaps = 12/613 (1%)
Frame = -3
Query: 1832 EDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAM 1653
ED ++REIDV F P ID D+K+Y++QYPLRP WR Y L+ERC+EVRVKP E+DL++
Sbjct: 110 EDMIVREIDVFFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSI 169
Query: 1652 DENGENYDDNADEYLKISKQTLTST-KAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMT 1476
D + N+D L + KQTL++T A YAIG+L GNKL+L P+ VQLR M
Sbjct: 170 DVDSNNWDSEKASRLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMG 229
Query: 1475 HIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLEE 1296
+ G K ++ E PV+ + + + +++ R+ S + ++ E
Sbjct: 230 FLKSGGSKRK---------NNVASEIPVKLEDSNQDKSVGSSKKQNKRMGSIE--QRSNE 278
Query: 1295 EEPWIVLEPYGPDNSVTNELLEKLVTVEDCEIPFNMNSHHYIDALVPGRTSTTSNHQLHG 1116
EE W+ L+ +G + + L++++ E+ I F MN + Y+ +L PG S
Sbjct: 279 EECWVPLKYHGSKSDFSARYLQRMLVEENSPIHFTMNPYDYVSSLCPGAGS--------- 329
Query: 1115 DHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYAF 936
++T + G SR +L S+ L++R K + + V RF +LM FA + E+V+ V+
Sbjct: 330 NNTKSKGPSRRFLLSMPLEERFKKLLCEGE-PVQRFSTLMHFAPNDTVEDVIGVLHKNGL 388
Query: 935 LVQGCWVPASIFHYRGD--LCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVREVLSYIA 762
LVQG W P S + D CL RDYVLL FSKN + ++ L ++ ++ L+ A
Sbjct: 389 LVQGLWAPRSPLLFNNDKMKCLARDYVLLSFSKNSVVKFQHLSVSPKLRDHIKCFLNIFA 448
Query: 761 DQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHGIQASNI 582
++P W FR++TD +FI+ + I +Q + W E I + +
Sbjct: 449 VERPDFKDWKFRQQTDLSFIKEHPNIVIKQEQVWAAAEKQITDVINKLGK---------- 498
Query: 581 SSGESL--DQLKRSAVNGTGELNKKANMKEKLQLDGSTMSQESRTSLALALREILSSH-V 411
SG +L D K + VN + +N +S ESR +L AL+++ H V
Sbjct: 499 -SGSTLRNDAGKSAMVNKHLKAINSSNGPSGALTGNKNLSNESREALPKALQKLFQIHKV 557
Query: 410 CNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAA--AKGATAPLGELTSVIDQVASNINGVY 237
C+L I+Q L++LA + T + +AA + E VI QVA+NI+G Y
Sbjct: 558 CSLPLIKQGLRDLAISQSTLPKADARMTVLAAEIVDSSFVDTQEFAEVISQVATNIHGFY 617
Query: 236 FLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEAC----KLEVGDPSPQIYSKIMK 69
KS +P R VV L+ A GP A ++K +V EA K E+ + YSK+M
Sbjct: 618 VSKSSEDPQHGPLRKVVTDLLLAGGPDAKLKKADVVEAARHVLKREISNAE---YSKVMS 674
Query: 68 ELCTSKGGGWVLK 30
++C SKG W+LK
Sbjct: 675 DICESKGSAWILK 687
>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
gi|550334731|gb|EEE90658.2| hypothetical protein
POPTR_0007s12540g [Populus trichocarpa]
Length = 667
Score = 305 bits (780), Expect = 6e-80
Identities = 219/620 (35%), Positives = 331/620 (53%), Gaps = 15/620 (2%)
Frame = -3
Query: 1832 EDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAM 1653
+D V+REIDV + P +DP+T++Y++QYPLRP WR Y L+ERC+EVRVKP+ EVDL++
Sbjct: 108 DDVVVREIDVYYTPSVDPNTQLYVMQYPLRPCWRPYELDERCKEVRVKPESTEVEVDLSI 167
Query: 1652 DENGENYDDNADEYLKISKQTLTST-KAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMT 1476
D+ +NYD + L + KQTL+S+ A YA+G+L GNKL+L P+ VQLRP M
Sbjct: 168 DDT-KNYDPDIASRLNMKKQTLSSSWSPPPATGYAVGVLIGNKLHLNPIHAVVQLRPSMD 226
Query: 1475 HIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLEE 1296
+++ G + +K G+D+ + KP+ ++Q + S + +K +
Sbjct: 227 YLSSG---NSKGKKNATSGEDSNEGKPLGLP------------KKQSKQMSSGNEQKPDV 271
Query: 1295 EEPWIVLEPYGPDNSVTNELLEKLVTVEDCEIPFNMNSHHYIDALVPGRTSTTSNHQLHG 1116
EE WI L+ +G + +++ L+ +V E I F MN + Y+ +L PG + +N +L+G
Sbjct: 272 EESWIPLKYHGSKSDLSSRYLQNMVAPESSTIEFAMNPYDYMSSLCPG--ISNNNIKLNG 329
Query: 1115 DHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYAF 936
SR L SL L++RIK +F + + RF +L S E++L V++ Y
Sbjct: 330 P-------SRRVLLSLPLEERIKRLFLEGP-PIHRFAALRHLIPNDSIEDLLIVLQEYGQ 381
Query: 935 LVQGCWVPASIFHYRGD------LCLVRDYVLLLFSKNKNIHYEQLEELGLPKER--VRE 780
LVQG WVP + + RDY+LLLFSK+ + EL +P + ++
Sbjct: 382 LVQGLWVPKTSLLFPNPKPTEKVKLAARDYILLLFSKSLVV---TPSELNVPMKPLILKS 438
Query: 779 VLSYIADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHG 600
L+ A ++P W F+E D F+ I ++Q + W
Sbjct: 439 FLNIFAVERPSFKDWKFKENVDTLFVELYPDIVRKQEQAW-------------------E 479
Query: 599 IQASNISSGESLDQLKRSAVNGTGELNKKANMKEKLQLDGSTMSQESRTSLALALREILS 420
+ NIS+ + D+ +S ++K K K TM+ E+R +L AL ++L
Sbjct: 480 VMGKNISA--AFDRAGKS-------VSKNVITKPK-----KTMTDETREALRKALPKVLQ 525
Query: 419 SH-VC--NLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAPLGELTSVIDQVASNI 249
+H VC + I Q L+ LA + T K + +AAA GA AP EL VI +VA+NI
Sbjct: 526 THKVCRYGFQMICQGLRQLAISQSTL-PKADPRIAVAAASGAEAPPEELQEVISEVATNI 584
Query: 248 NGVYFLKSL-GNPTIDAY-RNVVVKLIRAKGPGAIIRKVEVFEACKLEV-GDPSPQIYSK 78
+G Y LKS +P D R VV+ L A+GP A I+K EV A +LE+ +PS Y K
Sbjct: 585 HGFYVLKSSPEHPDFDPLSRKVVIGLFLARGPNANIKKSEVQAAARLELKREPSNSEYIK 644
Query: 77 IMKELCTSKGGGWVLKTGDG 18
+M +LC SKG WVLK+GDG
Sbjct: 645 VMTDLCESKGSAWVLKSGDG 664
>gb|EOX91150.1| Transcription regulators,zinc ion binding, putative isoform 3
[Theobroma cacao]
Length = 736
Score = 299 bits (766), Expect = 2e-78
Identities = 213/649 (32%), Positives = 327/649 (50%), Gaps = 44/649 (6%)
Frame = -3
Query: 1832 EDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAM 1653
ED V+REIDV F P ID +T++Y++QYPLRP WR Y L+ERC+EVRVKP E+DLA+
Sbjct: 118 EDMVVREIDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAV 177
Query: 1652 DENGENYDDNADEYLKISKQTLTST-KAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMT 1476
D + NYD LK++KQTL+S+ YA+G+L G+KL+L P+ VQLRP M
Sbjct: 178 DVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMC 237
Query: 1475 HIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLEE 1296
H+ + +++ A + + E+P + K A S K Q +K ++
Sbjct: 238 HLKPSVSK-RKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTE-------QKADD 289
Query: 1295 EEPWIVLEPYGPDNSVTNELLEKLVTVEDCEIPFNMNSHHYIDALVPGRTSTTSNHQLHG 1116
+E W+ L+ + N + + L++++ E C I F M+ + Y+D+L PG ++N++ G
Sbjct: 290 KECWVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPG---ASNNNKAQG 346
Query: 1115 DHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYAF 936
SR L S+ L++R+K + S+ RF +L FA S E++ V++ +A
Sbjct: 347 P-------SRRLLLSIPLEERLKKLLSEGP-PFHRFSALKHFAPDASIEDIFEVLQKHAL 398
Query: 935 LVQGCWVPASIFHYRGD--LCLVRDYVLLLFSKNKNIHYEQLEELG-LPKERVREVLSYI 765
LVQG WVP S + D L RDYVLLLFSKN I Q+ L KE V+ L +
Sbjct: 399 LVQGLWVPKSSLLFPEDPYKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKIL 458
Query: 764 ADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHGIQASN 585
A ++P W +E D+ F + I K Q + W ED + I G +
Sbjct: 459 AIERPSFKDWKLKENADEGFKKLYPDIVKNQEQIWRAGEDNV------INHICRGAKGGP 512
Query: 584 ISSGESLDQLKRSAVNGTGELNKKANMKEKLQLDGSTMSQESRTSLALALREILSSH-VC 408
+ A+N + + A + G TMS E+R ++ AL+++ +H VC
Sbjct: 513 SRTKPGTVIKPEKAMNSDKGVRRVAPAVQA----GRTMSDETREAIPKALKKVFQTHKVC 568
Query: 407 NLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAPLGELTSVIDQVASNIN-GVYFL 231
+L+ IR+ L++LA + T K +A + AA GA AP EL V+ +VA ++ G++ L
Sbjct: 569 SLQLIRKGLRDLALSQSTL-PKADARMVVKAAYGADAPEHELQEVVSEVAVELHGGLFVL 627
Query: 230 KS--------------------------------LGNPTIDA-----YRNVVVKLIRAKG 162
+S L NP+ + R VV+ L+R KG
Sbjct: 628 RSSPEHPEYDPLRLHKYVQLVFKWEEMFMVSMFFLQNPSFSSELFFPCREVVINLLRVKG 687
Query: 161 PGAIIRKVEVFEACKLEV-GDPSPQIYSKIMKELCTSKGGGWVLKTGDG 18
++K +V A L + + S Y+K+M + C K WVLK+GDG
Sbjct: 688 K---LKKADVSAAALLSLKREISNNEYNKVMSDFCEYKSSWWVLKSGDG 733
>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
Length = 643
Score = 298 bits (764), Expect = 4e-78
Identities = 212/609 (34%), Positives = 310/609 (50%), Gaps = 4/609 (0%)
Frame = -3
Query: 1832 EDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAM 1653
ED ++REIDV P IDP+TK+Y++QYPLRP WR Y L++RC+EVRVK K EVDLA+
Sbjct: 104 EDEIVREIDVYLTPSIDPNTKLYVLQYPLRPLWRPYELDDRCEEVRVKCKSAEVEVDLAV 163
Query: 1652 DENGENYDDNADEYLKISKQTLTST-KAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMT 1476
D + +NYD +AD + ++KQTLTS+ K + A YA+G+L GNKL+L P+ VQLRP M
Sbjct: 164 DVDSKNYDSDADPRVSMTKQTLTSSWKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQ 223
Query: 1475 HIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLEE 1296
H + KR A + +D K + V KP EQ + +
Sbjct: 224 HYKP--ESSKRRTTASSNLEDNTKGEEVTTGSLKKQGKPSGPVIEQNK----------DT 271
Query: 1295 EEPWIVLEPYGPDNSVTNELLEKLVTVEDCEIPFNMNSHHYIDALVPGRTSTTSNHQLHG 1116
E WI L +G + ++ + K+V + I F+MN H Y++ L PG TSN
Sbjct: 272 REDWIPLNYHGARSDISMSYVRKMVEHDSSHIQFSMN-HDYVNTLCPG----TSN----- 321
Query: 1115 DHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYAF 936
++ G+ G SR L SL L++R + Q + RF++L A S E++L V+ +A
Sbjct: 322 ENNGSNGPSRVLL-SLPLEERFRTWLLQGP-PIHRFDALKHLAPDASVEDILAVLSQHAQ 379
Query: 935 LVQGCWVPASIFHY---RGDLCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVREVLSYI 765
LVQG W+P S Y +G L RDYVLLLFS+ I+ QL + +R+VL +
Sbjct: 380 LVQGLWIPKSSLLYGKDQGIDALARDYVLLLFSRTPIINNSQLPQQQKLNRAMRDVLDTV 439
Query: 764 ADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHGIQASN 585
A ++ W F+E D TFI+ N I +EQ + W + E I + F K +
Sbjct: 440 AFERVSLNDWKFKEPPDMTFIKLNPKIVREQEQTWERLEKLITEKIFGDK--------NR 491
Query: 584 ISSGESLDQLKRSAVNGTGELNKKANMKEKLQLDGSTMSQESRTSLALALREILSSHVCN 405
++ S L + + L+K A+ + MS+E+R +L AL+++ SH
Sbjct: 492 PATKNSSRPLTTNNPATSKSLSKHASNSLNAGVPRRPMSEETREALPKALQKLFQSHKVC 551
Query: 404 LKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAPLGELTSVIDQVASNINGVYFLKS 225
++I Q L+ +A V ++ K A + +AAA G AP EL ++I QVA NI+GVY LKS
Sbjct: 552 FQQICQRLREMA-VSESSRPKGFAREAIAAAHGVEAPPEELQAIISQVAINIHGVYVLKS 610
Query: 224 LGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLEVGDPSPQIYSKIMKELCTSKGG 45
P+ +++ELC S+G
Sbjct: 611 ---------------------------------------SPVHPEHDEFVVQELCVSQGS 631
Query: 44 GWVLKTGDG 18
WVLK+GDG
Sbjct: 632 AWVLKSGDG 640
>gb|EOX91149.1| Transcription regulators,zinc ion binding, putative isoform 2
[Theobroma cacao]
Length = 588
Score = 293 bits (751), Expect = 1e-76
Identities = 202/598 (33%), Positives = 313/598 (52%), Gaps = 8/598 (1%)
Frame = -3
Query: 1832 EDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAM 1653
ED V+REIDV F P ID +T++Y++QYPLRP WR Y L+ERC+EVRVKP E+DLA+
Sbjct: 21 EDMVVREIDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAV 80
Query: 1652 DENGENYDDNADEYLKISKQTLTST-KAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMT 1476
D + NYD LK++KQTL+S+ YA+G+L G+KL+L P+ VQLRP M
Sbjct: 81 DVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMC 140
Query: 1475 HIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLEE 1296
H+ + +++ A + + E+P + K A S K Q +K ++
Sbjct: 141 HLKPSVSK-RKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTE-------QKADD 192
Query: 1295 EEPWIVLEPYGPDNSVTNELLEKLVTVEDCEIPFNMNSHHYIDALVPGRTSTTSNHQLHG 1116
+E W+ L+ + N + + L++++ E C I F M+ + Y+D+L PG ++N++ G
Sbjct: 193 KECWVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPG---ASNNNKAQG 249
Query: 1115 DHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYAF 936
SR L S+ L++R+K + S+ RF +L FA S E++ V++ +A
Sbjct: 250 P-------SRRLLLSIPLEERLKKLLSEGP-PFHRFSALKHFAPDASIEDIFEVLQKHAL 301
Query: 935 LVQGCWVPASIFHYRGD--LCLVRDYVLLLFSKNKNIHYEQLEELG-LPKERVREVLSYI 765
LVQG WVP S + D L RDYVLLLFSKN I Q+ L KE V+ L +
Sbjct: 302 LVQGLWVPKSSLLFPEDPYKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKIL 361
Query: 764 ADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHGIQASN 585
A ++P W +E D+ F + I K Q + W ED + I G +
Sbjct: 362 AIERPSFKDWKLKENADEGFKKLYPDIVKNQEQIWRAGEDNV------INHICRGAKGGP 415
Query: 584 ISSGESLDQLKRSAVNGTGELNKKANMKEKLQLDGSTMSQESRTSLALALREILSSH-VC 408
+ A+N + + A + G TMS E+R ++ AL+++ +H VC
Sbjct: 416 SRTKPGTVIKPEKAMNSDKGVRRVAPAVQA----GRTMSDETREAIPKALKKVFQTHKVC 471
Query: 407 NLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAPLGELTSVIDQVASNINGVYFL- 231
+L+ IR+ L++LA + T K +A + AA GA AP EL V+ +VA ++G F+
Sbjct: 472 SLQLIRKGLRDLALSQSTL-PKADARMVVKAAYGADAPEHELQEVVSEVAVELHGGLFVL 530
Query: 230 -KSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLEV-GDPSPQIYSKIMKEL 63
S +P D R VV+ L+R KG ++K +V A L + + S Y+K ++ +
Sbjct: 531 RSSPEHPEYDPLREVVINLLRVKGK---LKKADVSAAALLSLKREISNNEYNKALRNM 585
>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 677
Score = 289 bits (740), Expect = 3e-75
Identities = 207/582 (35%), Positives = 298/582 (51%), Gaps = 9/582 (1%)
Frame = -3
Query: 1832 EDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAM 1653
ED ++REIDV F P ID T++Y++QYPLRP WR Y L+ERC+EVRVKP+ EVDL +
Sbjct: 114 EDMIVREIDVFFTPSIDSATQLYVMQYPLRPCWRPYELDERCEEVRVKPQSTEVEVDLTI 173
Query: 1652 DENGENYDDNADEYLKISKQTL-TSTKAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMT 1476
D++ N+D KQTL TS YA+G+L GNKL+L P+ VQLRP +
Sbjct: 174 DDS-SNWDPAQASKYNFKKQTLSTSFMPPRVTGYAVGVLIGNKLHLNPIHAVVQLRPSLE 232
Query: 1475 HIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLEE 1296
H+ +D KR A + + + E E KP S K
Sbjct: 233 HV--NSNDSKRKNSA-TLNPEVKLEDSNEGKPIGSSKK---------------------- 267
Query: 1295 EEPWIVLEPYGPDNSVTNELLEKLVTVEDCEIPFNMNSHHYIDALVPGRTSTTSNHQLHG 1116
+ WI L+ +G + ++ LEK++ E + F M + Y+ +L P SN
Sbjct: 268 -QCWISLKYHGSKSDFSSRYLEKMIAQESSPMEFTMTPYDYMSSLCP----VASN----- 317
Query: 1115 DHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYAF 936
+ T + G R +L SL L +R+K + + V RF L FA S E+VL V++ Y
Sbjct: 318 EKTKSKGPPRRFLLSLPLAERLKKLILEGP-PVQRFSVLKHFAPDDSVEDVLKVLQEYGQ 376
Query: 935 LVQGCWVPAS--IFHYRGDLCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVREVLSYIA 762
LVQG W P S +F +RDYVLLLFSKN I+ Q+ KE ++ L+ A
Sbjct: 377 LVQGLWAPKSSLLFPDANSKQGIRDYVLLLFSKNLVINSSQVNFPVKIKEEIKSFLNLFA 436
Query: 761 DQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHGIQASNI 582
++P W F+E TD TFI+ I K+Q E W E + K S
Sbjct: 437 VERPSFKDWKFKEHTDTTFIKLYPDIVKKQEEAWDNTEKRLSKV----------FDRSGK 486
Query: 581 SSGESLDQLKRSAVNGTGELNKKANMKE----KLQLDGSTMSQESRTSLALALREILSSH 414
+S ++ N L+ + +M + +L +T++ E+R +L AL ++ SH
Sbjct: 487 ASMKNAIPKPPMVHNTVKHLDSEKSMPKIASGMRRLTKTTITVETREALLKALPKVFQSH 546
Query: 413 -VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAPLGELTSVIDQVASNINGVY 237
VC+ + I Q L++LA + T K + +AAA GA AP EL +I QVA+NI+G Y
Sbjct: 547 KVCSFQLICQGLRDLAVSQSTL-PKADPRIAVAAASGADAPPEELQEIISQVATNIHGFY 605
Query: 236 FLKSL-GNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKL 114
LKS +P D R V++ L+ A+GP A ++K EVFEA +L
Sbjct: 606 VLKSSPEHPQYDELRKVIIDLLLARGPNAKLKKAEVFEAARL 647
>ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Glycine
max]
Length = 697
Score = 286 bits (733), Expect = 2e-74
Identities = 206/632 (32%), Positives = 328/632 (51%), Gaps = 25/632 (3%)
Frame = -3
Query: 1832 EDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAM 1653
ED V+REIDV F P +D T++Y+ QYPLRP WR Y L+E+C+EVR+K K E+DL++
Sbjct: 107 EDTVVREIDVFFSPSVDAQTQLYVFQYPLRPSWRPYDLDEQCEEVRLKTKTSEVEIDLSI 166
Query: 1652 DENGENYDDNADEYLKISKQTLTST-KAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMT 1476
D + ++ D I+KQTL++T K A A+G+L G+KL+L PV VQLRP +
Sbjct: 167 DLDSDHIDKEFATKYNITKQTLSTTWKPSHANGCAVGLLMGDKLHLHPVHAVVQLRPTLQ 226
Query: 1475 HIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLEE 1296
H+ G + + A + G +A + +E SV ++ +Q + +K +
Sbjct: 227 HLNSG---GSKRKNAASTGANATVK--IEGSNEEKSVATSKKQNKQTGPSIIE--QKSDG 279
Query: 1295 EEPWIVLEPYGPDNSVTNELLEKLVTVEDCEIPFNMNSHHYIDALVPGRTSTTSNHQLHG 1116
+E W+ L+ + + +++ L+++VT E I F M ++ Y+ AL PG +S
Sbjct: 280 DECWVPLKYHSCKSDISSRYLQQMVTQESSPINFTMRAYDYVTALCPGGSSNNL------ 333
Query: 1115 DHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYAF 936
GLS+ YL SL +++R+K + + + RF ++ FA +S E+L ++ +A
Sbjct: 334 ----PKGLSKRYLLSLPVEERLKKMLEDRPLH--RFSAIKHFAPEYSENELLGFLQQHAI 387
Query: 935 LVQGCWVPASIFHY--RGDLCLVRDYVLLLFSKNKNIHYEQLE-ELGLPKERVREVLSYI 765
LV G W S Y G L RDY LLLFSK+ + + + G RVR L
Sbjct: 388 LVWGLWTAKSSLLYPDGGVETLARDYSLLLFSKSLKVQFSDVSIRGGELVNRVRNCLKIF 447
Query: 764 ADQK--------PQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQA 609
++ W FRE D++F + I ++Q E + E
Sbjct: 448 GVERNDLDKSTGKPNPYWKFRELPDESFKKLYPDIVEKQEELFKGLEK------------ 495
Query: 608 LHGIQASNISSGESLDQLKRSAVNGTG---ELNKKANMKEKLQLDG------STMSQESR 456
Q S SS ++ ++AV G E++K + +++ G TMS E+R
Sbjct: 496 ----QLSGFSSNVGKRKIGKNAVANQGVNTEVHKSESSDQRVTSLGRVPPAKMTMSNETR 551
Query: 455 TSLALALREILSSH-VCNLKEIRQSLQNLAKVKG--TAGNKKEAVKGMAAAKGATAPLGE 285
+L +AL+++ +H VC+ K I + L+ +A K + G+ K AV AA P E
Sbjct: 552 HALPIALKKLFQTHKVCSFKLICEGLREMAVSKAMLSKGDSKMAVD---AAHSLDGPHNE 608
Query: 284 LTSVIDQVASNINGVYFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLEVG 105
L +VI +VA ING Y LKS + D +R+VV+ ++ GP A ++K E+ EA + ++G
Sbjct: 609 LMAVISEVACEINGSYVLKSSPD---DPFRDVVIDMLCGSGPNAKLKKAEILEAARRKLG 665
Query: 104 -DPSPQIYSKIMKELCTSKGGGWVLKTGDGTE 12
+ + Y+K+M ELC SKG WVLK+GDG++
Sbjct: 666 REVASNEYTKVMSELCVSKGSVWVLKSGDGSK 697
>ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5 [Medicago truncatula]
gi|358344405|ref|XP_003636280.1| DNA-directed RNA
polymerase III subunit RPC5 [Medicago truncatula]
gi|355502215|gb|AES83418.1| DNA-directed RNA polymerase
III subunit RPC5 [Medicago truncatula]
gi|355513299|gb|AES94922.1| DNA-directed RNA polymerase
III subunit RPC5 [Medicago truncatula]
Length = 683
Score = 286 bits (732), Expect = 2e-74
Identities = 202/618 (32%), Positives = 323/618 (52%), Gaps = 11/618 (1%)
Frame = -3
Query: 1832 EDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAM 1653
ED V+REIDV F P ID DTK+Y++QYPLRP WR Y L+E+C+EVR+KP EVDL++
Sbjct: 105 EDTVVREIDVYFSPSIDNDTKLYVMQYPLRPSWRPYDLDEQCEEVRLKPGTSEVEVDLSI 164
Query: 1652 DENGENYDDNADEYLKISKQTLTST-KAQLAAAYAIGILRGNKLNLTPVQEAVQLRPLMT 1476
D N + + LK +KQTL++T K A A+G+L G+KL+L P+ VQLRP
Sbjct: 165 DLESYNVEKATADKLKYTKQTLSTTWKPPPANGCAVGLLMGDKLHLHPIHAVVQLRPSRH 224
Query: 1475 HIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLEE 1296
++ G + K + N K T EQ + +K +
Sbjct: 225 YLDSGGSEKKNVATSNNQN------------------KQTTPSMEQKSDGAPSIEQKSDS 266
Query: 1295 EEPWIVLEPYGPDNSVTNELLEKLVTVEDCEIPFNMNSHHYIDALVPGRTSTTSNHQLHG 1116
+ W+ LE +G + +++ +++VT E I F M+++ YI L PG +S T
Sbjct: 267 NQCWVPLEYHGCKSDISSRYFQQMVTHESSPINFEMSTYDYIATLCPGVSSNTL------ 320
Query: 1115 DHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYAF 936
G S+ YL SL ++ R++ + + + RF ++ FA S +E+L+V++ A
Sbjct: 321 ----AKGPSKRYLLSLPVEKRLQTLLIEGP-PLHRFSAIKHFAPECSDDELLSVLEKQAQ 375
Query: 935 LVQGCWVPAS--IFHYRGDLCLVRDYVLLLFSKNKNIHYEQLEELGLPK--ERVREVLSY 768
L++G WVP S +F G L R+Y+L+ F K+ + ++L LG + R++ +
Sbjct: 376 LLRGYWVPRSSLLFPTGGIESLARNYILVRFHKSLTVKSDELRRLGGGELGNRMKHFVMQ 435
Query: 767 IA----DQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHG 600
A D K +E W F+E D++FI+ I+ K+Q E + E+ + SI L G
Sbjct: 436 FALEKFDLKSKENYWKFKELPDESFIKEFPIVVKKQEEIFKILENEVN----SIIGTLGG 491
Query: 599 IQASNISSGESLDQLKRSAVNGTGELNKKANMKEKLQLDGSTMSQESRTSLALALREILS 420
+ S + + + T + ++ E TMS E+R +L +AL+++
Sbjct: 492 --KRKLKSAITNSGVNNALFTSTNSDPRATSLGED-PPRSMTMSSETRHALPIALKKLFQ 548
Query: 419 SH-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAPLGELTSVIDQVASNING 243
+H VC+ + I Q L+ LA + T K + + AA P EL +++ +VA +I+G
Sbjct: 549 THKVCSFQLICQELRGLALAQ-TMLPKGGSKMSVDAANSLDVPQDELKAILGEVACDIHG 607
Query: 242 VYFLKSLGNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLEVGDPSP-QIYSKIMKE 66
Y LKS N D +R+VV+ ++R GP ++K E+ EA + ++G P Y K + E
Sbjct: 608 CYVLKSAQN---DPFRDVVIDMLRGSGPNGKLKKAEILEAARRKLGRDVPNNEYIKAVSE 664
Query: 65 LCTSKGGGWVLKTGDGTE 12
LC SKG WVLK+GDG++
Sbjct: 665 LCVSKGSFWVLKSGDGSK 682
>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum
lycopersicum]
Length = 669
Score = 281 bits (720), Expect = 5e-73
Identities = 196/621 (31%), Positives = 319/621 (51%), Gaps = 17/621 (2%)
Frame = -3
Query: 1829 DRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAMD 1650
D ++REIDVC P DP T++Y+ QYPL+ WR Y LEERCQEVR++P EVDLA+D
Sbjct: 92 DEIVREIDVCINPSFDPSTQLYVFQYPLKAVWRPYELEERCQEVRLRPSTAEMEVDLAID 151
Query: 1649 ENGENYDDNADEYLKISKQTLTSTKAQL---AAAYAIGILRGNKLNLTPVQEAVQLRPLM 1479
+ +N+D ++ + KQ L+++ L + YA+G+L G+KL+L PV VQLRP
Sbjct: 152 LDSKNFDRDSVHAATVKKQMLSTSWIPLPTCTSGYAVGVLIGDKLHLNPVHAVVQLRPSK 211
Query: 1478 THIAQGLDDIKRSRKAVNMGDDAEKEKPVEAKPALVSVKPETERQEQLRLRSYQHFKKLE 1299
++ + ++K++ N E E E +P V P ++ + + +
Sbjct: 212 RNLKE--SELKKNIITNNDEKSVENEDVKEKRP----VGPSKKQNKSPGIEK-------D 258
Query: 1298 EEEPWIVLEPYGPDNSVTNELLEKLVTVEDCEIPFNMNSHHYIDALVPGRTSTTSNHQLH 1119
E W+ L+ +G + ++ L+K+ E +PF+M+ Y++A PGR + T +
Sbjct: 259 IGEHWLHLKYHGARSDISARYLQKMSMEEGSPVPFSMSPVDYLNAFCPGRPTDTDRLK-- 316
Query: 1118 GDHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKTYA 939
+ R+ L L L++R++ I+ + + RF++LM A +S +E++ V++ YA
Sbjct: 317 --------ILRTRLSQLPLEERVR-IWLLEGPPIHRFDALMHLAPDNSADEIIRVLQIYA 367
Query: 938 FLVQGCWVPASIFHY---RGDLCLVRDYVLLLFSK----NKNIHYEQLEELGLPKERVRE 780
LVQG WVP S Y G L R++VL F+K K++ + E L +
Sbjct: 368 QLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFL----KAATP 423
Query: 779 VLSYIADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHG 600
L +A ++P W +E DK F + +EQ W G
Sbjct: 424 ALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVREQQATW----------------ECLG 467
Query: 599 IQASNISSGESLDQLKRSAVNGTGELN--KKANMKEKLQLDGSTMSQESRTSLALALREI 426
Q +++ G ++ +N ++ + L ++MS+E R +L AL+E+
Sbjct: 468 KQINDVLPGGRTRPTMKNPINRNADITALPSGDKPTSSSLLRTSMSEEIREALPKALQEV 527
Query: 425 LSSH-VCNLKEIRQSLQNLAKVKG--TAGNKKEAVKGMAAAKGATAPLGELTSVIDQVAS 255
++ VC+ ++IRQ L+ L K G ++A+ A+ AP E+ +VI+QVA
Sbjct: 528 FRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAI--TASVDVFDAPQEEIQAVINQVAV 585
Query: 254 NINGVYFLKSL-GNPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACKLEVG-DPSPQIYS 81
NI+GVY LKS NP D R +V+ L A+GP A ++K V EA KL++ D + +
Sbjct: 586 NIHGVYVLKSSPDNPQYDTLRKIVIDLFMAEGPSAKLKKASVTEAAKLQLNRDITNVEFL 645
Query: 80 KIMKELCTSKGGGWVLKTGDG 18
K+MKELC S+ WVL++GDG
Sbjct: 646 KVMKELCHSEKSAWVLRSGDG 666
>gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
Length = 732
Score = 281 bits (719), Expect = 7e-73
Identities = 198/585 (33%), Positives = 305/585 (52%), Gaps = 13/585 (2%)
Frame = -3
Query: 1832 EDRVIREIDVCFRPHIDPDTKVYMVQYPLRPHWRSYGLEERCQEVRVKPKQVRFEVDLAM 1653
ED V+REIDV F P ID T++Y++QYPLRP WR Y L+ERC+EVRVKP E+DL++
Sbjct: 107 EDMVVREIDVFFNPKIDEGTQLYVLQYPLRPSWRPYELDERCEEVRVKPASSEVEMDLSL 166
Query: 1652 DENGENYDDNADEYLKISKQTLTSTKAQ-LAAAYAIGILRGNKLNLTPVQEAVQLRPLMT 1476
D + +NYD + + L ++KQTL + Q A YA+G+L GNKL+L + +QLRP +
Sbjct: 167 DVDSKNYDPDCGDRLNMTKQTLCCSWDQPRATRYAVGVLMGNKLHLNRIHAVMQLRPSLK 226
Query: 1475 HIAQGLDDIKRSRKAVNMGDDAEKEKPVE---AKPALVSVKPETERQEQLRLRSYQHFKK 1305
H+ S+K N+ DAE +E K A+ S K +Q++ + +K
Sbjct: 227 HLISA-----GSKKKNNVKVDAEDTVKLEESSGKKAIGSSK------KQIKQENSSVKQK 275
Query: 1304 LEEEEPWIVLEPYGPDNSVTNELLEKLVTVEDCEIPFNMNSHHYIDALVPGRTSTTSNHQ 1125
+ +EE W+ L+ +G ++ + L K+ E + F M+ + Y+++L PG + +
Sbjct: 276 IADEEGWVPLKYHGSESESSVRYLRKMAVQESSPLQFTMSPYDYLNSLCPGSCKNGNEPK 335
Query: 1124 LHGDHTGNAGLSRSYLDSLKLQDRIKAIFSQKRIQVFRFESLMRFASGHSTEEVLNVVKT 945
G SR L SL L++RIK++ + V RF L FA +T+E+L+ ++
Sbjct: 336 ---------GPSRRALLSLPLEERIKSLLCEGLAPVHRFSVLKHFAPDCTTKEILDALQN 386
Query: 944 YAFLVQGCWVPASIF-----HYRGDLCLVRDYVLLLFSKNKNIHYEQLEELGLPKERVRE 780
+A LVQG W P S G + RDYVLLLF KN + L K V +
Sbjct: 387 HALLVQGLWAPKSSLLLGTSKETGAQRIARDYVLLLFWKNPVFSFSSLHFPSSLKTAVNK 446
Query: 779 VLSYIADQKPQEGCWVFREETDKTFIRNNQIIFKEQNEQWLQNEDAIRKAAFSIKQALHG 600
L+ + ++P W F+ +TD +FI+N + K+Q E W E I F ++ G
Sbjct: 447 FLNILGVERPSVKDWKFKGQTDISFIKNYPDVVKKQEEVWGDLERDIMN-MFGDGKSGRG 505
Query: 599 IQASNISSGESLDQLKRSAV-NGTGELNKKANMKEKLQLDGSTMSQESRTSL-ALALREI 426
+ ++I S V GT E+ + G + + R L + L ++
Sbjct: 506 PKNTSIPSRPVKPLNSNKGVPKGTSEV-----------VGGKKIPDDIREVLCSKILPKV 554
Query: 425 LSSH-VCNLKEIRQSLQNLAKVKGTAGNKKEAVKGMAAAKGATAPLGELTSVIDQVASNI 249
+ H VC+L+ + Q L+ LA K K + AAA G +P GEL ++D+ A NI
Sbjct: 555 IQEHKVCSLQLMCQGLRELALNKLNL-PKADDRFARAAACGTASP-GELVKLLDETAINI 612
Query: 248 NGVYFLKSLG-NPTIDAYRNVVVKLIRAKGPGAIIRKVEVFEACK 117
+G+Y LKS +P D +RNVV+ L+R G A ++K E+F+A K
Sbjct: 613 HGLYVLKSSAEHPQYDPFRNVVIDLLRQNGLAAKLKKAEIFDAAK 657