BLASTX nr result
ID: Ephedra27_contig00011918
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00011918
(473 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006852744.1| hypothetical protein AMTR_s00033p00106440 [A... 60 2e-07
gb|EMJ23299.1| hypothetical protein PRUPE_ppa005656mg [Prunus pe... 59 7e-07
ref|XP_004291368.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltra... 59 9e-07
ref|XP_004238352.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltra... 58 1e-06
ref|XP_006342041.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltra... 57 3e-06
ref|XP_006342040.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltra... 57 3e-06
gb|EOY15014.1| Eukaryotic initiation factor 3 gamma subunit fami... 56 6e-06
ref|XP_002307715.1| eukaryotic initiation factor 3 gamma subunit... 56 6e-06
gb|ESW32665.1| hypothetical protein PHAVU_001G007200g [Phaseolus... 55 7e-06
ref|XP_006435170.1| hypothetical protein CICLE_v10001119mg [Citr... 55 7e-06
ref|XP_006435169.1| hypothetical protein CICLE_v10001119mg [Citr... 55 7e-06
ref|XP_002510522.1| translation initiation factor, putative [Ric... 55 7e-06
gb|EOY15012.1| Eukaryotic initiation factor 3 gamma subunit fami... 55 1e-05
ref|XP_002882030.1| eukaryotic initiation factor 3 gamma subunit... 55 1e-05
>ref|XP_006852744.1| hypothetical protein AMTR_s00033p00106440 [Amborella trichopoda]
gi|548856358|gb|ERN14211.1| hypothetical protein
AMTR_s00033p00106440 [Amborella trichopoda]
Length = 482
Score = 60.5 bits (145), Expect = 2e-07
Identities = 34/60 (56%), Positives = 37/60 (61%), Gaps = 8/60 (13%)
Frame = -2
Query: 157 SNIVSEVRKPS--------KAIRQADAGNIAHWTENGFSSLIVAAPENDPWNVIEELLPL 2
SN V E + PS K RQA I W ENGF+SLIVAAPE DPWN I+ELLPL
Sbjct: 344 SNSVDENKDPSSLKVSKSLKPGRQASEEEIKLWKENGFTSLIVAAPELDPWNAIQELLPL 403
>gb|EMJ23299.1| hypothetical protein PRUPE_ppa005656mg [Prunus persica]
Length = 449
Score = 58.9 bits (141), Expect = 7e-07
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Frame = -2
Query: 367 DIDTPLEQGSTLCQTETKSNIVPAECIGNYTEIDPKSKFPDSCTMEIGKPSEAILHP--- 197
DI G +C+ +S + + N + P S+ DSC ME + ++ I P
Sbjct: 249 DIARIFNFGDEICKRIVRSPLTDLFSVQNGLQ-KPVSQDSDSCNME-SQSNDRISSPVSM 306
Query: 196 ---NFSSDKKIEH---ETRSNIVSEVRKPSKAIRQADAGNIAHWTENGFSSLIVAAPEND 35
+ +S+ I E+ S+ V ++ KP+K +A I+ W E+GFS LI+AAPE D
Sbjct: 307 EEVSLASENVISDLIPESTSSPVIKMSKPAKLGEKAPQEIISSWKEHGFSCLIIAAPELD 366
Query: 34 PWNVIEELLPL 2
W++++E+ PL
Sbjct: 367 TWSLVKEIFPL 377
>ref|XP_004291368.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic
subunit trm6-like [Fragaria vesca subsp. vesca]
Length = 451
Score = 58.5 bits (140), Expect = 9e-07
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Frame = -2
Query: 247 DSCTME----------IGKPSEAILHPNFSSDKKIEHETRSNIVSEVRKPSKAIRQADAG 98
DSC+ME +G + N +SD ++ T +++ + K +K +A
Sbjct: 289 DSCSMETESNEQISSTVGTEEVTLASENMTSDLIVD--TTNSVERKPSKSAKLGEKAPHD 346
Query: 97 NIAHWTENGFSSLIVAAPENDPWNVIEELLPL 2
I+ W ENGFSSLI+AAPE D W++++E+LPL
Sbjct: 347 IISMWKENGFSSLIIAAPELDTWSLVKEILPL 378
>ref|XP_004238352.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic
subunit trm6-like [Solanum lycopersicum]
Length = 446
Score = 57.8 bits (138), Expect = 1e-06
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = -2
Query: 163 TRSNIVSEVRKPSKAIR---QADAGNIAHWTENGFSSLIVAAPENDPWNVIEELLPL 2
T + S + KP K+I+ +A I W ENGFSSLI+AAPE DPW +I+E+LPL
Sbjct: 311 TPERVSSPIIKPVKSIKAGQKATLEAIKSWKENGFSSLIIAAPELDPWGIIKEVLPL 367
>ref|XP_006342041.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic
subunit trm6-like isoform X2 [Solanum tuberosum]
Length = 446
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = -2
Query: 163 TRSNIVSEVRKPSKAIR---QADAGNIAHWTENGFSSLIVAAPENDPWNVIEELLPL 2
T + S + KP K+I+ +A I W ENGFSSLI+AAPE DPW +I+E+LPL
Sbjct: 311 TPERVPSPIIKPVKSIKPGQKAPLEAIKLWKENGFSSLIIAAPELDPWGIIKEVLPL 367
>ref|XP_006342040.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic
subunit trm6-like isoform X1 [Solanum tuberosum]
Length = 447
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = -2
Query: 163 TRSNIVSEVRKPSKAIR---QADAGNIAHWTENGFSSLIVAAPENDPWNVIEELLPL 2
T + S + KP K+I+ +A I W ENGFSSLI+AAPE DPW +I+E+LPL
Sbjct: 312 TPERVPSPIIKPVKSIKPGQKAPLEAIKLWKENGFSSLIIAAPELDPWGIIKEVLPL 368
>gb|EOY15014.1| Eukaryotic initiation factor 3 gamma subunit family protein
[Theobroma cacao]
Length = 417
Score = 55.8 bits (133), Expect = 6e-06
Identities = 45/153 (29%), Positives = 64/153 (41%), Gaps = 21/153 (13%)
Frame = -2
Query: 397 LETVHNVLHGDIDTPLEQGSTLCQTETKSNIVPAECIGNYTEIDPKS------------- 257
++ V +L G + L +LC T P E I PK
Sbjct: 191 VDMVGGLLTGAVAERLGGTGSLCNTYPVGRPYPMEIIRIILRCSPKDLCSAQNGTDEQVG 250
Query: 256 KFPDSCTMEIGKPSEAIL-----HPNFSSDKKIEHETRSNIVSEVRKPSKAIRQADAGN- 95
+ D T+E + L + SS+ + N +S V K KA + D
Sbjct: 251 QQKDVSTVESQSNEQTSLSVSTEEVHLSSENNVADLVPENELSTVSKTCKAPKAGDKAPK 310
Query: 94 --IAHWTENGFSSLIVAAPENDPWNVIEELLPL 2
I W ENGFSSLI+AAPE D W+++++LLPL
Sbjct: 311 EAIQLWKENGFSSLIIAAPEQDAWSLVKDLLPL 343
>ref|XP_002307715.1| eukaryotic initiation factor 3 gamma subunit family protein
[Populus trichocarpa] gi|222857164|gb|EEE94711.1|
eukaryotic initiation factor 3 gamma subunit family
protein [Populus trichocarpa]
Length = 434
Score = 55.8 bits (133), Expect = 6e-06
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = -2
Query: 247 DSCTMEIGKPSEAILHPNFSSDKKIEHETRSNIVSEVRKPSKAIRQADAGN---IAHWTE 77
DSC E+ I K E IVS K KA + + + + W E
Sbjct: 278 DSCNAELNVQISTISIEEMPLPSKHEAADSQTIVSPQSKMGKAPKAGEKASEEALKSWKE 337
Query: 76 NGFSSLIVAAPENDPWNVIEELLPL 2
NGFSSLI+AAP+ D WN+++ LLPL
Sbjct: 338 NGFSSLIIAAPDADAWNLVKVLLPL 362
>gb|ESW32665.1| hypothetical protein PHAVU_001G007200g [Phaseolus vulgaris]
Length = 470
Score = 55.5 bits (132), Expect = 7e-06
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -2
Query: 142 EVRKPSKAIRQADAGNIAHWTENGFSSLIVAAPENDPWNVIEELLPL 2
EVRK KA +A I W ENGFSSLIVAAPE D W ++++LLPL
Sbjct: 344 EVRKAPKAGERAQKEVIDLWKENGFSSLIVAAPELDTWTLVKDLLPL 390
>ref|XP_006435170.1| hypothetical protein CICLE_v10001119mg [Citrus clementina]
gi|557537292|gb|ESR48410.1| hypothetical protein
CICLE_v10001119mg [Citrus clementina]
Length = 452
Score = 55.5 bits (132), Expect = 7e-06
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = -2
Query: 166 ETRSNIVSEVRKPSKAIRQADAGNIAHWTENGFSSLIVAAPENDPWNVIEELLPL 2
E + V+++ K K +A + W ENGFSS+IV APE DPW+V+++LLPL
Sbjct: 321 EANHSPVNKISKSHKVGEKASQETLKLWKENGFSSMIVVAPELDPWSVVKDLLPL 375
>ref|XP_006435169.1| hypothetical protein CICLE_v10001119mg [Citrus clementina]
gi|557537291|gb|ESR48409.1| hypothetical protein
CICLE_v10001119mg [Citrus clementina]
Length = 401
Score = 55.5 bits (132), Expect = 7e-06
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = -2
Query: 166 ETRSNIVSEVRKPSKAIRQADAGNIAHWTENGFSSLIVAAPENDPWNVIEELLPL 2
E + V+++ K K +A + W ENGFSS+IV APE DPW+V+++LLPL
Sbjct: 321 EANHSPVNKISKSHKVGEKASQETLKLWKENGFSSMIVVAPELDPWSVVKDLLPL 375
>ref|XP_002510522.1| translation initiation factor, putative [Ricinus communis]
gi|223551223|gb|EEF52709.1| translation initiation
factor, putative [Ricinus communis]
Length = 514
Score = 55.5 bits (132), Expect = 7e-06
Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Frame = -2
Query: 265 PKSKFPDSCTMEIGKPSEAILHPNF--SSDKKI---EHETRSNIVSEVRKPSKAIRQADA 101
P S D ++E + +I SS+ ++ +H+ ++ +S++ K KA +A
Sbjct: 278 PMSSHEDGPSVEANDQNSSISMEEIPESSENQVADLDHDATASPISKMSKAPKAGERASE 337
Query: 100 GNIAHWTENGFSSLIVAAPENDPWNVIEELLPL 2
+ W ENGFSSLI+AAP+ D W++++ LLPL
Sbjct: 338 EALKLWKENGFSSLIIAAPDLDAWSLVKVLLPL 370
>gb|EOY15012.1| Eukaryotic initiation factor 3 gamma subunit family protein
[Theobroma cacao]
Length = 451
Score = 55.1 bits (131), Expect = 1e-05
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = -2
Query: 196 NFSSDKKIEHETRSNIVSEVRKPSKAIRQADAGN---IAHWTENGFSSLIVAAPENDPWN 26
+ SS+ + N +S V K KA + D I W ENGFSSLI+AAPE D W+
Sbjct: 310 HLSSENNVADLVPENELSTVSKTCKAPKAGDKAPKEAIQLWKENGFSSLIIAAPEQDAWS 369
Query: 25 VIEELLPL 2
++++LLPL
Sbjct: 370 LVKDLLPL 377
>ref|XP_002882030.1| eukaryotic initiation factor 3 gamma subunit family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297327869|gb|EFH58289.1| eukaryotic initiation factor
3 gamma subunit family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 446
Score = 55.1 bits (131), Expect = 1e-05
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Frame = -2
Query: 181 KKIEHETRSNIVSEVRKPSKAIRQADAG------NIAHWTENGFSSLIVAAPENDPWNVI 20
++I T + +V V SK I+ A AG I W ENGFSSLI+AA + DPW+V
Sbjct: 309 EEISATTEAGVVDIVVPESKVIKAAKAGAKASKETIEMWRENGFSSLIIAAQDQDPWSVA 368
Query: 19 EELLPL 2
+++LPL
Sbjct: 369 KDVLPL 374