BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00011831
         (503 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006854169.1| hypothetical protein AMTR_s00048p00193770 [A...   244   9e-63
ref|XP_001763962.1| predicted protein [Physcomitrella patens] gi...   220   2e-55
ref|XP_002972789.1| hypothetical protein SELMODRAFT_413396 [Sela...   173   2e-41
ref|XP_006639295.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    64   2e-08
ref|XP_005996116.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    64   2e-08
ref|XP_002937025.2| PREDICTED: E3 ubiquitin-protein ligase HERC2...    64   2e-08
ref|XP_004872246.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    62   6e-08
ref|XP_004872245.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    62   6e-08
ref|XP_004872243.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    62   6e-08
ref|XP_004883909.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    62   6e-08
ref|XP_004883908.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    62   6e-08
gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heter...    62   6e-08
ref|XP_003198854.2| PREDICTED: E3 ubiquitin-protein ligase HERC2...    62   8e-08
ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    62   1e-07
ref|XP_006108203.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    61   2e-07
ref|XP_006017132.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    61   2e-07
ref|XP_005874448.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    61   2e-07
ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    61   2e-07
ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2...    61   2e-07
ref|XP_006262807.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    60   2e-07

>ref|XP_006854169.1| hypothetical protein AMTR_s00048p00193770 [Amborella trichopoda]
            gi|548857838|gb|ERN15636.1| hypothetical protein
            AMTR_s00048p00193770 [Amborella trichopoda]
          Length = 830

 Score =  244 bits (623), Expect = 9e-63
 Identities = 111/166 (66%), Positives = 131/166 (78%), Gaps = 3/166 (1%)
 Frame = -1

Query: 494  LYIRSATKDYMDEANLVTGFTGKPIKIQCGRAFHTIIMTDDGRAWTWGQG---YYPGIKA 324
            +YIRSAT +YM++ NLVTG+TG+PIKIQCGRA+H II+TDDG AW WG G   Y   I  
Sbjct: 613  IYIRSATNNYMEDVNLVTGYTGRPIKIQCGRAYHAIILTDDGHAWLWGNGCFNYMESISH 672

Query: 323  SGFPISTCQPAVGTLVGRKVIDVGCYGEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATP 144
             GF  STCQPA+GTLVG+KVIDVGCYG DFIALT+DG+VHQWTH + NPA+GVYNVP  P
Sbjct: 673  FGFVSSTCQPALGTLVGQKVIDVGCYGSDFIALTSDGNVHQWTHGMTNPASGVYNVPIIP 732

Query: 143  LYGHGPCIPHGHKLNQIAIGAGMCAGITESGTVHTWKTDMKGGFSS 6
            L    P IPH  KL Q++IG GMCAGIT+ G VHTW+T MKGG ++
Sbjct: 733  LESRRPSIPHDEKLVQVSIGVGMCAGITDGGRVHTWRTAMKGGLAN 778


>ref|XP_001763962.1| predicted protein [Physcomitrella patens]
           gi|162684701|gb|EDQ71101.1| predicted protein
           [Physcomitrella patens]
          Length = 487

 Score =  220 bits (560), Expect = 2e-55
 Identities = 98/167 (58%), Positives = 121/167 (72%), Gaps = 8/167 (4%)
 Frame = -1

Query: 494 LYIRSATKDYMDEANLVTGFTGKPIKIQCGRAFHTIIMTDDGRAWTWGQGYYPGIKASGF 315
           +YIR+ATKDYMDE NLV+G+TGKP KIQCG  +H I++TDDGRAWTWG GY+P   ++  
Sbjct: 265 VYIRAATKDYMDEVNLVSGYTGKPFKIQCGGIYHAILLTDDGRAWTWGDGYHPSSTSNAS 324

Query: 314 --------PISTCQPAVGTLVGRKVIDVGCYGEDFIALTNDGDVHQWTHAVPNPAAGVYN 159
                   P S C  A+GTLVG+KV+DVGC GEDF+ALT+DG VH WTH V NPAA +YN
Sbjct: 325 TSKNGDQSPYSLCHLALGTLVGQKVVDVGCCGEDFVALTSDGAVHHWTHGVANPAADIYN 384

Query: 158 VPATPLYGHGPCIPHGHKLNQIAIGAGMCAGITESGTVHTWKTDMKG 18
            P+TP  G GP I  G KL  ++ G GMCAG+T+ G VHTW+   +G
Sbjct: 385 TPSTPAAGQGPSIHEGDKLKSVSAGVGMCAGVTQLGRVHTWRALWRG 431


>ref|XP_002972789.1| hypothetical protein SELMODRAFT_413396 [Selaginella moellendorffii]
            gi|300159390|gb|EFJ26010.1| hypothetical protein
            SELMODRAFT_413396 [Selaginella moellendorffii]
          Length = 787

 Score =  173 bits (439), Expect = 2e-41
 Identities = 80/160 (50%), Positives = 108/160 (67%)
 Frame = -1

Query: 503  TGHLYIRSATKDYMDEANLVTGFTGKPIKIQCGRAFHTIIMTDDGRAWTWGQGYYPGIKA 324
            T  +YIRSATKD+M+E N +TGF+G+P+KIQCG A+H II+TDDGRAWTWG+GY+PG   
Sbjct: 589  TDRVYIRSATKDFMEEVNHITGFSGRPLKIQCGSAYHAIILTDDGRAWTWGRGYFPGTGN 648

Query: 323  SGFPISTCQPAVGTLVGRKVIDVGCYGEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATP 144
            + F                V+D+ C G++FIALT+DG+VHQWTH  PN   GV N P + 
Sbjct: 649  ATF---------------SVVDIACCGQNFIALTDDGEVHQWTHGPPNSFLGVENSPKSA 693

Query: 143  LYGHGPCIPHGHKLNQIAIGAGMCAGITESGTVHTWKTDM 24
            L      +P   KL ++A+G G+ AGI+ +G +HTWKT +
Sbjct: 694  LK-----VPTEDKLQKVALGVGVVAGISSAGKLHTWKTSL 728


>ref|XP_006639295.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Lepisosteus oculatus]
          Length = 4814

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 44/145 (30%), Positives = 66/145 (45%), Gaps = 2/145 (1%)
 Frame = -1

Query: 449  LVTGFTG-KPIKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLV 276
            LVTG  G K I + CG     T+ +T++G+ W+WG G Y  +   G         V  L 
Sbjct: 594  LVTGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQ 653

Query: 275  GRKVIDVGCYGEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATPLYGHGPCIPHGHKLNQ 96
               ++ V C  +  +ALT DG V+ W     N   G +       Y        G K+  
Sbjct: 654  DLDIVKVCCGSQFSVALTKDGQVYTWGKG-DNQRLG-HGTDEHVRYPKLLDSLQGKKVVD 711

Query: 95   IAIGAGMCAGITESGTVHTWKTDMK 21
            IA+G+  C  +T+ G VH+W ++ K
Sbjct: 712  IAVGSTHCLALTDEGEVHSWGSNDK 736



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 43/146 (29%), Positives = 59/146 (40%), Gaps = 11/146 (7%)
 Frame = -1

Query: 422  IKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLVGRKVIDVGCY 246
            I + CG     T+ +TDD   W+WG G Y  +   G         + +L G  VI V C 
Sbjct: 4126 IDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVIKVECG 4185

Query: 245  GEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATPLYGHGPCIP----------HGHKLNQ 96
             +  +ALT  G V+ W         G Y+       GHG               G K+  
Sbjct: 4186 SQFSVALTKSGAVYTW-------GKGDYH-----RLGHGSDDHVRRPRQVQGLQGKKVIA 4233

Query: 95   IAIGAGMCAGITESGTVHTWKTDMKG 18
            IA G+  C   TE G V+TW  + +G
Sbjct: 4234 IATGSLHCVSCTEDGEVYTWGDNDEG 4259


>ref|XP_005996116.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Latimeria chalumnae]
          Length = 4737

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 2/145 (1%)
 Frame = -1

Query: 449  LVTGFTG-KPIKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLV 276
            LVTG  G K I + CG     T+ +T++G+ W+WG G Y  +   G         +  L 
Sbjct: 598  LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 657

Query: 275  GRKVIDVGCYGEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATPLYGHGPCIPHGHKLNQ 96
               ++   C  +  +ALT DG+V+ W     N   G +       Y        G K+  
Sbjct: 658  DLNIVKACCGSQFSVALTKDGEVYSWGKG-DNQRLG-HGTDEHVRYPKLIDTLQGTKIID 715

Query: 95   IAIGAGMCAGITESGTVHTWKTDMK 21
            +A+G+  C  +TE G VH+W ++ K
Sbjct: 716  VAVGSTHCLVLTEDGEVHSWGSNDK 740


>ref|XP_002937025.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Xenopus (Silurana)
            tropicalis]
          Length = 4840

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
 Frame = -1

Query: 449  LVTGFTG-KPIKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLV 276
            LVTG  G K + + CG     T+ +T++G+ W+WG G Y  +   G         +  L 
Sbjct: 596  LVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 655

Query: 275  GRKVIDVGCYGEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATPLYGHGPCIPH---GHK 105
               ++ V C  +  IA+T DG V+ W     N   G      T  +   P I +   G K
Sbjct: 656  DLDIVKVRCGSQFSIAITKDGQVYSWGKG-DNQRLG----HGTEEHVRYPKIMNGLQGKK 710

Query: 104  LNQIAIGAGMCAGITESGTVHTW 36
            +  +A+G+  C  +TESG V++W
Sbjct: 711  VVDVAVGSTHCLALTESGEVYSW 733


>ref|XP_004872246.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform X4
            [Heterocephalus glaber]
          Length = 4836

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
 Frame = -1

Query: 449  LVTGFTG-KPIKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLV 276
            LV G  G K I + CG     T+ +T++G+ W+WG G Y  +   G         +  L 
Sbjct: 597  LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 656

Query: 275  GRKVIDVGCYGEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATPLYGHGPCIPHGHKLNQ 96
              +V+ V C  +  +ALT DG V+ W     N   G +       Y       HG K+  
Sbjct: 657  DLEVVKVRCGSQFSVALTKDGQVYSWGKG-DNQRLG-HGTEEHVRYPRLLEGLHGKKVID 714

Query: 95   IAIGAGMCAGITESGTVHTW 36
            +A G+  C  +TE   VH+W
Sbjct: 715  VAAGSTHCLALTEDSEVHSW 734


>ref|XP_004872245.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform X3
            [Heterocephalus glaber]
          Length = 4833

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
 Frame = -1

Query: 449  LVTGFTG-KPIKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLV 276
            LV G  G K I + CG     T+ +T++G+ W+WG G Y  +   G         +  L 
Sbjct: 597  LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 656

Query: 275  GRKVIDVGCYGEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATPLYGHGPCIPHGHKLNQ 96
              +V+ V C  +  +ALT DG V+ W     N   G +       Y       HG K+  
Sbjct: 657  DLEVVKVRCGSQFSVALTKDGQVYSWGKG-DNQRLG-HGTEEHVRYPRLLEGLHGKKVID 714

Query: 95   IAIGAGMCAGITESGTVHTW 36
            +A G+  C  +TE   VH+W
Sbjct: 715  VAAGSTHCLALTEDSEVHSW 734


>ref|XP_004872243.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform X1
            [Heterocephalus glaber] gi|513021958|ref|XP_004872244.1|
            PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform X2
            [Heterocephalus glaber]
          Length = 4838

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
 Frame = -1

Query: 449  LVTGFTG-KPIKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLV 276
            LV G  G K I + CG     T+ +T++G+ W+WG G Y  +   G         +  L 
Sbjct: 597  LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 656

Query: 275  GRKVIDVGCYGEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATPLYGHGPCIPHGHKLNQ 96
              +V+ V C  +  +ALT DG V+ W     N   G +       Y       HG K+  
Sbjct: 657  DLEVVKVRCGSQFSVALTKDGQVYSWGKG-DNQRLG-HGTEEHVRYPRLLEGLHGKKVID 714

Query: 95   IAIGAGMCAGITESGTVHTW 36
            +A G+  C  +TE   VH+W
Sbjct: 715  VAAGSTHCLALTEDSEVHSW 734


>ref|XP_004883909.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform X2
            [Heterocephalus glaber]
          Length = 4532

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
 Frame = -1

Query: 449  LVTGFTG-KPIKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLV 276
            LV G  G K I + CG     T+ +T++G+ W+WG G Y  +   G         +  L 
Sbjct: 597  LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 656

Query: 275  GRKVIDVGCYGEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATPLYGHGPCIPHGHKLNQ 96
              +V+ V C  +  +ALT DG V+ W     N   G +       Y       HG K+  
Sbjct: 657  DLEVVKVRCGSQFSVALTKDGQVYSWGKG-DNQRLG-HGTEEHVRYPRLLEGLHGKKVID 714

Query: 95   IAIGAGMCAGITESGTVHTW 36
            +A G+  C  +TE   VH+W
Sbjct: 715  VAAGSTHCLALTEDSEVHSW 734


>ref|XP_004883908.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform X1
            [Heterocephalus glaber]
          Length = 4831

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
 Frame = -1

Query: 449  LVTGFTG-KPIKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLV 276
            LV G  G K I + CG     T+ +T++G+ W+WG G Y  +   G         +  L 
Sbjct: 597  LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 656

Query: 275  GRKVIDVGCYGEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATPLYGHGPCIPHGHKLNQ 96
              +V+ V C  +  +ALT DG V+ W     N   G +       Y       HG K+  
Sbjct: 657  DLEVVKVRCGSQFSVALTKDGQVYSWGKG-DNQRLG-HGTEEHVRYPRLLEGLHGKKVID 714

Query: 95   IAIGAGMCAGITESGTVHTW 36
            +A G+  C  +TE   VH+W
Sbjct: 715  VAAGSTHCLALTEDSEVHSW 734


>gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
          Length = 4833

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
 Frame = -1

Query: 449  LVTGFTG-KPIKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLV 276
            LV G  G K I + CG     T+ +T++G+ W+WG G Y  +   G         +  L 
Sbjct: 597  LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 656

Query: 275  GRKVIDVGCYGEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATPLYGHGPCIPHGHKLNQ 96
              +V+ V C  +  +ALT DG V+ W     N   G +       Y       HG K+  
Sbjct: 657  DLEVVKVRCGSQFSVALTKDGQVYSWGKG-DNQRLG-HGTEEHVRYPRLLEGLHGKKVID 714

Query: 95   IAIGAGMCAGITESGTVHTW 36
            +A G+  C  +TE   VH+W
Sbjct: 715  VAAGSTHCLALTEDSEVHSW 734


>ref|XP_003198854.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Danio rerio]
          Length = 1187

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
 Frame = -1

Query: 449  LVTGFTG-KPIKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLV 276
            LVT   G K I + CG     T+ +T++G+ W+WG G Y  +   G         V  L 
Sbjct: 586  LVTALKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQ 645

Query: 275  GRKVIDVGCYGEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATPLYGHGPCIPHGHKLNQ 96
               ++ V C  +  +ALT DG V+ W     N   G +       Y        G ++  
Sbjct: 646  DLDIVKVCCGSQFSVALTKDGQVYTWGKG-DNQRLG-HGTDEHVRYPKLLDSLQGKRVVD 703

Query: 95   IAIGAGMCAGITESGTVHTWKTDMK 21
            IA+G+  C  +TE G VH+W ++ K
Sbjct: 704  IAVGSTHCLALTEEGEVHSWGSNDK 728


>ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
          Length = 4777

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
 Frame = -1

Query: 449 LVTGFTG-KPIKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLV 276
           LVT   G K + + CG     T+ +T++G+ W+WG G Y  +   G         V  L 
Sbjct: 547 LVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQ 606

Query: 275 GRKVIDVGCYGEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATPLYGHGPCIPHGHKLNQ 96
              ++ V C  +  +ALT DG V+ W     N   G +       Y        G K+  
Sbjct: 607 DLDIVKVCCGSQFSVALTKDGQVYTWGKG-DNQRLG-HGTDEHVRYPKLLDSLQGKKVVD 664

Query: 95  IAIGAGMCAGITESGTVHTWKTDMK 21
           IA+G+  C  +T+ G VH+W ++ K
Sbjct: 665 IAVGSTHCLALTDEGEVHSWGSNDK 689



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
 Frame = -1

Query: 467 YMDEANLVTGFTGKP-----IKIQCGRAFHTIIMTDDGRAWTWGQGYYPGIKASGFPIST 303
           Y++E  L+T F+GK      ++I CG  +   + T DG  +TWG+G Y  +        T
Sbjct: 485 YLEEPALITTFSGKQTGKQVVQIACGSTYSAAV-TADGELYTWGRGNYGRLGHGSSEDVT 543

Query: 302 CQPAVGTLVGRKVIDVGCYGED--FIALTNDGDVHQW 198
               V  L G+KV+DV C   D   +A+T +G V  W
Sbjct: 544 TPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSW 580



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 42/146 (28%), Positives = 59/146 (40%), Gaps = 11/146 (7%)
 Frame = -1

Query: 422  IKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLVGRKVIDVGCY 246
            I + CG     T+ +TDD   W+WG G Y  +   G         + +L G  V+ V C 
Sbjct: 4089 IDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4148

Query: 245  GEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATPLYGHGPCIP----------HGHKLNQ 96
             +  +ALT  G V+ W         G Y+       GHG               G K+  
Sbjct: 4149 SQFSVALTKSGAVYTW-------GKGDYH-----RLGHGSDDHVRRPRQVQGLQGKKVIA 4196

Query: 95   IAIGAGMCAGITESGTVHTWKTDMKG 18
            IA G+  C   TE G V+TW  + +G
Sbjct: 4197 IATGSLHCVCCTEDGEVYTWGDNDEG 4222


>ref|XP_006108203.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Myotis lucifugus]
          Length = 1725

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 42/140 (30%), Positives = 60/140 (42%), Gaps = 2/140 (1%)
 Frame = -1

Query: 449  LVTGFTG-KPIKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLV 276
            LV G  G K I + CG     T+ +TD+G+ W+WG G Y  +   G         +  L 
Sbjct: 793  LVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 852

Query: 275  GRKVIDVGCYGEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATPLYGHGPCIPHGHKLNQ 96
               V+ V C  +  +ALT DG V+ W     N   G +       Y        G K+  
Sbjct: 853  DLDVVKVRCGSQFSVALTKDGQVYSWGKG-DNQRLG-HGTEEHVRYPKLLEALQGKKVID 910

Query: 95   IAIGAGMCAGITESGTVHTW 36
            +A G+  C  +TE   VH+W
Sbjct: 911  VAAGSTHCLALTEDSEVHSW 930


>ref|XP_006017132.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Alligator sinensis]
          Length = 4849

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 44/143 (30%), Positives = 63/143 (44%), Gaps = 5/143 (3%)
 Frame = -1

Query: 449  LVTGFTG-KPIKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLV 276
            LVTG  G K I + CG     T+ +T++G+ W+WG G Y  +   G         +  L 
Sbjct: 607  LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 666

Query: 275  GRKVIDVGCYGEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATPLYGHGPCIPH---GHK 105
               V+ V C  +  IALT DG V+ W     N   G      T  +   P +     G K
Sbjct: 667  DLDVVKVRCGSQFSIALTKDGQVYTWGKG-DNQRLG----HGTEEHVRYPKLLEGLKGKK 721

Query: 104  LNQIAIGAGMCAGITESGTVHTW 36
            +  +A G+  C  +TE   VH+W
Sbjct: 722  VIDVAAGSTHCLALTEDSEVHSW 744



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 43/146 (29%), Positives = 59/146 (40%), Gaps = 11/146 (7%)
 Frame = -1

Query: 422  IKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLVGRKVIDVGCY 246
            I I CG     T+ +TDD   W+WG G Y  +   G         + +L G  V+ V C 
Sbjct: 4161 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4220

Query: 245  GEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATPLYGHGPCIP----------HGHKLNQ 96
             +  +ALT  G V+ W         G Y+       GHG               G K+  
Sbjct: 4221 SQFSVALTKSGAVYTW-------GKGDYH-----RLGHGSDDHVRRPRQVQGLQGKKVIA 4268

Query: 95   IAIGAGMCAGITESGTVHTWKTDMKG 18
            IA G+  C   TE G V+TW  + +G
Sbjct: 4269 IATGSLHCVCCTEDGEVYTWGDNDEG 4294


>ref|XP_005874448.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Myotis brandtii]
          Length = 4660

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 42/140 (30%), Positives = 60/140 (42%), Gaps = 2/140 (1%)
 Frame = -1

Query: 449  LVTGFTG-KPIKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLV 276
            LV G  G K I + CG     T+ +TD+G+ W+WG G Y  +   G         +  L 
Sbjct: 597  LVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 656

Query: 275  GRKVIDVGCYGEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATPLYGHGPCIPHGHKLNQ 96
               V+ V C  +  +ALT DG V+ W     N   G +       Y        G K+  
Sbjct: 657  DLDVVKVRCGSQFSVALTKDGQVYSWGKG-DNQRLG-HGTEEHVRYPKLLEALQGKKVID 714

Query: 95   IAIGAGMCAGITESGTVHTW 36
            +A G+  C  +TE   VH+W
Sbjct: 715  VAAGSTHCLALTEDSEVHSW 734


>ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
           anatinus]
          Length = 3053

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 42/141 (29%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
 Frame = -1

Query: 449 LVTGFTG-KPIKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLV 276
           LVTG  G K I + CG     T+ +T++G+ W+WG G Y  +   G         +  L 
Sbjct: 301 LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 360

Query: 275 GRKVIDVGCYGEDFIALTNDGDVHQWTHAVPNPAA-GVYNVPATPLYGHGPCIPHGHKLN 99
              ++ V C  +  IALT DG V+ W          G       P    G     G K+ 
Sbjct: 361 DLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG---LQGKKVV 417

Query: 98  QIAIGAGMCAGITESGTVHTW 36
            +A G+  C  +TE   VH+W
Sbjct: 418 DVAAGSTHCLALTEDSEVHSW 438



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 43/146 (29%), Positives = 59/146 (40%), Gaps = 11/146 (7%)
 Frame = -1

Query: 422  IKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLVGRKVIDVGCY 246
            I I CG     T+ +TDD   W+WG G Y  +   G         + +L G  V+ V C 
Sbjct: 2365 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 2424

Query: 245  GEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATPLYGHGPCIP----------HGHKLNQ 96
             +  +ALT  G V+ W         G Y+       GHG               G K+  
Sbjct: 2425 SQFSVALTKSGAVYTW-------GKGDYH-----RLGHGSDDHVRRPRQVQGLQGKKVIA 2472

Query: 95   IAIGAGMCAGITESGTVHTWKTDMKG 18
            IA G+  C   TE G V+TW  + +G
Sbjct: 2473 IATGSLHCVCCTEDGEVYTWGDNDEG 2498


>ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
          Length = 4706

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 42/141 (29%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
 Frame = -1

Query: 449  LVTGFTG-KPIKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLV 276
            LVTG  G K I + CG     T+ +T++G+ W+WG G Y  +   G         +  L 
Sbjct: 597  LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 656

Query: 275  GRKVIDVGCYGEDFIALTNDGDVHQWTHAVPNPAA-GVYNVPATPLYGHGPCIPHGHKLN 99
               V+ V C  +  +ALT DG V+ W          G       P    G     G K+ 
Sbjct: 657  DLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG---LQGKKVV 713

Query: 98   QIAIGAGMCAGITESGTVHTW 36
             +A G+  C  +TE   VH+W
Sbjct: 714  DVAAGSTHCLALTEDSEVHSW 734



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 43/146 (29%), Positives = 59/146 (40%), Gaps = 11/146 (7%)
 Frame = -1

Query: 422  IKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLVGRKVIDVGCY 246
            I I CG     T+ +TDD   W+WG G Y  +   G         + +L G  V+ V C 
Sbjct: 4018 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4077

Query: 245  GEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATPLYGHGPCIP----------HGHKLNQ 96
             +  +ALT  G V+ W         G Y+       GHG               G K+  
Sbjct: 4078 SQFSVALTKSGAVYTW-------GKGDYH-----RLGHGSDDHVRRPRQVQGLQGKKVIA 4125

Query: 95   IAIGAGMCAGITESGTVHTWKTDMKG 18
            IA G+  C   TE G V+TW  + +G
Sbjct: 4126 IATGSLHCVCCTEDGEVYTWGDNDEG 4151


>ref|XP_006262807.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Alligator
           mississippiensis]
          Length = 4827

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 43/140 (30%), Positives = 61/140 (43%), Gaps = 2/140 (1%)
 Frame = -1

Query: 449 LVTGFTG-KPIKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLV 276
           LVTG  G K I + CG     T+ +T++G+ W+WG G Y  +   G         +  L 
Sbjct: 585 LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 644

Query: 275 GRKVIDVGCYGEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATPLYGHGPCIPHGHKLNQ 96
              V+ V C  +  IALT DG V+ W     N   G +       Y        G K+  
Sbjct: 645 DLDVVKVRCGSQFSIALTKDGQVYTWGKG-DNQRLG-HGTEEHVRYPKMLEGLKGKKVID 702

Query: 95  IAIGAGMCAGITESGTVHTW 36
           +A G+  C  +TE   VH+W
Sbjct: 703 VAAGSTHCLALTEDSEVHSW 722



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 43/146 (29%), Positives = 59/146 (40%), Gaps = 11/146 (7%)
 Frame = -1

Query: 422  IKIQCGRA-FHTIIMTDDGRAWTWGQGYYPGIKASGFPISTCQPAVGTLVGRKVIDVGCY 246
            I I CG     T+ +TDD   W+WG G Y  +   G         + +L G  V+ V C 
Sbjct: 4139 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4198

Query: 245  GEDFIALTNDGDVHQWTHAVPNPAAGVYNVPATPLYGHGPCIP----------HGHKLNQ 96
             +  +ALT  G V+ W         G Y+       GHG               G K+  
Sbjct: 4199 SQFSVALTKSGAVYTW-------GKGDYH-----RLGHGSDDHVRRPRQVQGLQGKKVIA 4246

Query: 95   IAIGAGMCAGITESGTVHTWKTDMKG 18
            IA G+  C   TE G V+TW  + +G
Sbjct: 4247 IATGSLHCVCCTEDGEVYTWGDNDEG 4272