BLASTX nr result

ID: Ephedra27_contig00011798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00011798
         (1197 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311555.1| zinc finger family protein [Populus trichoca...    62   5e-07

>ref|XP_002311555.1| zinc finger family protein [Populus trichocarpa]
           gi|222851375|gb|EEE88922.1| zinc finger family protein
           [Populus trichocarpa]
          Length = 393

 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 39/121 (32%), Positives = 61/121 (50%)
 Frame = -2

Query: 740 ERDTIMDHEHRRELQLLPTSDRAVSSLTDERSSNQEERLIELSIGINNHTRGDEEEAVGV 561
           +  T    EH  ELQLLP+S   +    DE  +      ++LSIG         E+    
Sbjct: 240 DASTSSQQEHNLELQLLPSSSNHLPQNPDEPHAAN----LKLSIGSTKLKEFTNEQLRLA 295

Query: 560 KTQRMYADRAREAARRQMXXXXXXXXXXXXXXEQARAELNRAHRLKEEASKSIQSTCLEV 381
            T++ YA+ AR+ A+RQ+              +QA++EL +A  LKE+A+K + ST ++V
Sbjct: 296 MTEKAYAEEARQQAKRQIEMAELEFANAKRIRQQAQSELEKAQLLKEQATKKLSSTIMQV 355

Query: 380 T 378
           T
Sbjct: 356 T 356


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