BLASTX nr result

ID: Ephedra27_contig00011712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00011712
         (415 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                              95   1e-17

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 51/140 (36%), Positives = 83/140 (59%), Gaps = 2/140 (1%)
 Frame = +1

Query: 1   GLLLVGMTLQRFETISENQEECMDVLDEMFRLCAYLKNIREMEPLREKMGDLFEKSMELV 180
           GLL+V   L+RFE +S+NQ+EC  VL EM  L   +K I+E   L+++M D  + + EL+
Sbjct: 170 GLLVVANILERFEDVSDNQDECFHVLKEMIFLAKVVKQIKERPQLQQRMHDEVKDATELI 229

Query: 181 AEGTILCSSQNESSSFFRFLRATGHRKQLEDIRKEVNKIHTHLMLQM--SFYTVQNLNKR 354
            EG+I C SQ  SS F  F   + ++++L ++ ++++  + H+ +QM    Y V    K 
Sbjct: 230 VEGSIKCCSQMASSQFSNFFSTSVNKEELGEVAQQLDVKYKHIYIQMGIEIYDVGQCKKA 289

Query: 355 PIKLPREQFYPTHAVGIEEA 414
            +     + YP HAVG+EE+
Sbjct: 290 NL----SRRYPEHAVGLEES 305


Top