BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00011632
         (1151 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi...   179   2e-47
emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera]   159   5e-46
gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arab...   162   6e-46
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768...   163   6e-46
gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]               163   6e-46
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi...   162   2e-45
emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]           156   4e-45
gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza...   157   6e-45
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]   159   6e-45
emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera]   154   9e-44
gb|ABA95820.1| retrotransposon protein, putative, unclassified [...   155   4e-43
gb|ACI62137.1| polyprotein [Drosophila melanogaster]                  151   6e-43
emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera]   155   1e-42
emb|CAB75932.1| putative protein [Arabidopsis thaliana]               150   4e-42
gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsi...   169   5e-42
gb|AAK12626.1| unknown protein [Aedes aegypti]                        177   5e-42
gb|ADK92880.1| retrotransposon 4 protein [Hypericum perforatum]       156   1e-41
ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255...   151   2e-41
gb|EOY08837.1| Uncharacterized protein TCM_024078 [Theobroma cacao]   157   3e-41
gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sat...   158   4e-41

>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1499

 Score =  179 bits (454), Expect(2) = 2e-47
 Identities = 111/315 (35%), Positives = 163/315 (51%), Gaps = 2/315 (0%)
 Frame = +3

Query: 150  QNKGIKKELTTPYTPE*NGVSERKNRTLIEMVRSLLISSCLSQRWWGEATLTATYILNLI 329
            Q  GI  E+TTPY+P+ NGV+ER+NRTL+EM RS++    LS ++W EA  T+TY+ N +
Sbjct: 600  QESGIHHEITTPYSPQQNGVAERRNRTLVEMARSMIEEKKLSNKFWAEAIATSTYLQNRL 659

Query: 330  PRKDLN-WKTPFELWFKMKTSISHLRVFGCLCYFHIPRELRKKLDTKAKKGIMLGYSENS 506
            P K L    TP E+W   K S+ HL+VFGC+CY HIP E R+KLDTKAK+GI +GYS  S
Sbjct: 660  PSKSLEKGVTPMEIWSGKKPSVDHLKVFGCVCYIHIPDEKRRKLDTKAKQGIFVGYSNES 719

Query: 507  KAYRILDTETNNIIISSDVKFIEDNIPHITQERNSIEETIQIKGMSKLESDQVNHTNDIP 686
            K YR+       I +S DV F E      T   +   E   I  + K+ S +    ND+ 
Sbjct: 720  KGYRVFLLNEEKIEVSKDVTFDEKK----TWSHDEKGERKAILSLVKINSQEQGGGNDLN 775

Query: 687  AKEDVPQSVQEREETNSPPLEDNSPEEENLQENDPNNTQQESPKRPL*FRKTIEDAHAPF 866
            A  D   +   +   +S  ++++  E E          +   P+        ++      
Sbjct: 776  AHIDQVSNAFNQLHISSRGVQNSHEEGE----------ESVGPRGFRSINNLMDQT---- 821

Query: 867  MNDYEG-ILTHAKRKLQE*EIECCIAEFPNIEGPKNIKTALLDQNWKDAMDKEIEMLEKR 1043
             N+ EG  L H          E C+      E P+ ++ A+ D+ W +AM +E+ M+EK 
Sbjct: 822  -NEVEGEALIH----------EMCLM---MAEEPQALEEAMKDEKWIEAMREELRMIEKN 867

Query: 1044 NTWNLEQLLEDKKLI 1088
             TW +    +DK +I
Sbjct: 868  KTWEVVARPKDKNVI 882



 Score = 38.1 bits (87), Expect(2) = 2e-47
 Identities = 19/40 (47%), Positives = 26/40 (65%)
 Frame = +1

Query: 22  KSEVF*TFVTFRKKVQIQTNTKIKCFRSDNGTEFISNEFI 141
           KSEV   F  F+  V+ Q+ ++IK  R+D G EF+S EFI
Sbjct: 557 KSEVITKFKIFKPYVENQSESRIKRLRTDGGGEFLSREFI 596


>emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera]
          Length = 808

 Score =  159 bits (401), Expect(3) = 5e-46
 Identities = 104/315 (33%), Positives = 158/315 (50%), Gaps = 1/315 (0%)
 Frame = +3

Query: 150  QNKGIKKELTTPYTPE*NGVSERKNRTLIEMVRSLLISSCLSQRWWGEATLTATYILNLI 329
            +N GI+K+L   Y+P+ NGVSERKNRT++ MVR++L    + + +W EA + + +ILN  
Sbjct: 124  ENHGIQKQLIAAYSPQQNGVSERKNRTILNMVRTILSKGHIPRSFWPEAVIWSIHILNXS 183

Query: 330  PRKDLNWKTPFELWFKMKTSISHLRVFGCLCYFHIPRELRKKLDTKAKKGIMLGYSENSK 509
            P   +   TP + W   K S++H R+FGC+ Y HIP + RKKLD K +K I LG SE SK
Sbjct: 184  PTLVVQNVTPEZAWNGRKPSVNHFRIFGCIXYAHIPDQKRKKLDDKGEKCIFLGVSEMSK 243

Query: 510  AYRILDTETNNIIISSDVKFIEDNIPHITQERNSIEETIQIKGMSKLESD-QVNHTNDIP 686
            AY++ +  T  I+IS D+ F E +      + N+ ++ IQ     + E + Q      IP
Sbjct: 244  AYKLYNPITKKIVISRDIIFYEGSF--WKWDDNTTKQQIQXDFDGENEEERQQPJXQQIP 301

Query: 687  AKEDVPQSVQEREETNSPPLEDNSPEEENLQENDPNNTQQESPKRPL*FRKTIEDAHAPF 866
            A E  P       ET+       +PE +   E    ++     KRP      + D     
Sbjct: 302  AAEIPPNEAPXTXETS-----PTTPEFDEQVEAAXGSSSHXVXKRP----TXMSDYEVTG 352

Query: 867  MNDYEGILTHAKRKLQE*EIECCIAEFPNIEGPKNIKTALLDQNWKDAMDKEIEMLEKRN 1046
            ++  E  LTH              A F   + P   ++A+ +  W+ AM  EI  +E+ +
Sbjct: 353  IDQSEDPLTH-------------FALFSXCD-PTTFESAVKESKWRKAMXAEIAAIERND 398

Query: 1047 TWNLEQLLEDKKLIG 1091
             W L +L +  K IG
Sbjct: 399  XWELSELPKGHKTIG 413



 Score = 41.6 bits (96), Expect(3) = 5e-46
 Identities = 20/43 (46%), Positives = 27/43 (62%)
 Frame = +1

Query: 19  KKSEVF*TFVTFRKKVQIQTNTKIKCFRSDNGTEFISNEFIVF 147
           +KSE F TF +F+  V+ +    IK FRSD G E+ S EF+ F
Sbjct: 80  EKSEAFSTFKSFKMLVEKEAGKPIKIFRSDRGGEYTSQEFVNF 122



 Score = 33.1 bits (74), Expect(3) = 5e-46
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +2

Query: 1088 WFYTTKFLPNGNIEKYKARLV 1150
            W Y TK   NG ++KYKARLV
Sbjct: 416  WVYKTKLKENGEVDKYKARLV 436


>gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1404

 Score =  162 bits (410), Expect(3) = 6e-46
 Identities = 107/347 (30%), Positives = 171/347 (49%), Gaps = 36/347 (10%)
 Frame = +3

Query: 156  KGIKKELTTPYTPE*NGVSERKNRTLIEMVRSLLISSCLSQRWWGEATLTATYILNLIPR 335
            +GI  + + PYTP+ NGV+ERKNR L+E+ RS++  + + +R+WG+A LTA Y++N  P 
Sbjct: 595  RGIIHQTSCPYTPQQNGVAERKNRHLMEVARSMMFHTSVPKRFWGDAVLTACYLINRTPT 654

Query: 336  KDLNWKTPFELWFKMKTSISHLRVFGCLCYFHIPRELRKKLDTKAKKGIMLGYSENSKAY 515
            K L+  +PFE+    K  I HLRVFGC+C+  IP E R KLD K+ K + LGYS   K Y
Sbjct: 655  KVLSDLSPFEVLNNTKPFIDHLRVFGCVCFVLIPGEQRSKLDAKSTKCMFLGYSTTQKGY 714

Query: 516  RILDTETNNIIISSDVKFIEDNIPHITQERNSIEETIQIKGMSKLESDQVNH-------- 671
            +  D   N   IS DVKF+E+      Q+ N+ ++   +K ++   SD+V          
Sbjct: 715  KCFDPTKNRTFISRDVKFLEN------QDYNNKKDWENLKDLTHSTSDRVETLKFLLDHL 768

Query: 672  -TNDIPAKEDVPQSVQEREETNSPPLEDNSPEEENLQ--ENDPNNTQQES---------- 812
              +     +  P+  Q++E+ N    E +   +ENL   + DP NTQ+ S          
Sbjct: 769  GNDSTSTTQHQPEMTQDQEDLNQENEEVSLQHQENLTHVQEDPPNTQEHSEHVQEIQDDS 828

Query: 813  ----------PKRPL*FRKTIEDAHAPFMNDYEGILTH-----AKRKLQE*EIECCIAEF 947
                      P  P   R T       F N     + H         L   + +  +++ 
Sbjct: 829  SEDEEPTQVLPPPPPLRRSTRIRRKKEFFNS--NAVAHPFQATCSLALVPLDHQAFLSKI 886

Query: 948  PNIEGPKNIKTALLDQNWKDAMDKEIEMLEKRNTWNLEQLLEDKKLI 1088
                 P+  + A+  + W+DA+  EI  +++ +TW+ + L + KK +
Sbjct: 887  SEHWIPQTYEEAMEVKEWRDAIADEINAMKRNHTWDEDDLPKGKKTV 933



 Score = 38.5 bits (88), Expect(3) = 6e-46
 Identities = 19/39 (48%), Positives = 22/39 (56%)
 Frame = +1

Query: 22  KSEVF*TFVTFRKKVQIQTNTKIKCFRSDNGTEFISNEF 138
           K  VF  F  F   V  Q N KIK FR+DNG E+ S +F
Sbjct: 550 KDRVFEAFTNFETYVTNQFNAKIKVFRTDNGGEYTSQKF 588



 Score = 32.3 bits (72), Expect(3) = 6e-46
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +2

Query: 1082 THWFYTTKFLPNGNIEKYKARLV 1150
            + W +T K+  NG+IE+YK RLV
Sbjct: 935  SRWVFTIKYKSNGDIERYKTRLV 957


>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
          Length = 1334

 Score =  163 bits (413), Expect(3) = 6e-46
 Identities = 112/312 (35%), Positives = 162/312 (51%), Gaps = 1/312 (0%)
 Frame = +3

Query: 159  GIKKELTTPYTPE*NGVSERKNRTLIEMVRSLLISSCLSQRWWGEATLTATYILNLIPRK 338
            GIK++LT  YTP+ NGV+ERKNR+++ M R +L+   + +++W EA   A YILN  P K
Sbjct: 583  GIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSK 642

Query: 339  DLNWKTPFELWFKMKTSISHLRVFGCLCYFHIPRELRKKLDTKAKKGIMLGYSENSKAYR 518
             LN  TP E W   K S+ HLR+FG L Y  +P + R KLD K+ K +M G S+ SKAYR
Sbjct: 643  ALNDITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYR 702

Query: 519  ILDTETNNIIISSDVKFIEDNIPHITQERNSIEETIQIKGMSKLESDQVNHTNDIPAKED 698
            + D  T  I+IS DV+F E+       E  S+EE        +L  D  +H    PA E+
Sbjct: 703  LYDPATGKILISRDVQFDEER--GWEWEDKSLEE--------ELVWDNSDHE---PAGEE 749

Query: 699  VPQSVQEREETNSPPLEDNSPEEENLQENDPNNTQQESPKRPL*FRKTIEDAHAP-FMND 875
             P    E         E+   EEE + E    N        P      +     P +M D
Sbjct: 750  GP----EINHNGQQDQEETEEEEETVAETVHQNL-------PAVGTGGVRQRQQPVWMKD 798

Query: 876  YEGILTHAKRKLQE*EIECCIAEFPNIEGPKNIKTALLDQNWKDAMDKEIEMLEKRNTWN 1055
            Y  ++ +A+  + + E +  +A F   + P   + A   + W+ AM+ EI  +E+ NTW 
Sbjct: 799  Y--VVGNARVLITQDEEDEVLALFIGPDDPVCFEEAAQLEVWRKAMEAEITSIEENNTWE 856

Query: 1056 LEQLLEDKKLIG 1091
            L +L E+ K+IG
Sbjct: 857  LVELPEEAKVIG 868



 Score = 39.7 bits (91), Expect(3) = 6e-46
 Identities = 22/54 (40%), Positives = 31/54 (57%)
 Frame = +1

Query: 16  SKKSEVF*TFVTFRKKVQIQTNTKIKCFRSDNGTEFISNEFIVFFKIKE*KRNL 177
           S+KSE F  F  F+ +V+ ++  K+ C RSD G E+ S EF  + K    KR L
Sbjct: 535 SEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQL 588



 Score = 30.0 bits (66), Expect(3) = 6e-46
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 1088 WFYTTKFLPNGNIEKYKARLV 1150
            W + TKF   G ++K+KARLV
Sbjct: 871  WIFKTKFNEKGEVDKFKARLV 891


>gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]
          Length = 1207

 Score =  163 bits (413), Expect(3) = 6e-46
 Identities = 112/312 (35%), Positives = 162/312 (51%), Gaps = 1/312 (0%)
 Frame = +3

Query: 159  GIKKELTTPYTPE*NGVSERKNRTLIEMVRSLLISSCLSQRWWGEATLTATYILNLIPRK 338
            GIK++LT  YTP+ NGV+ERKNR+++ M R +L+   + +++W EA   A YILN  P K
Sbjct: 488  GIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSK 547

Query: 339  DLNWKTPFELWFKMKTSISHLRVFGCLCYFHIPRELRKKLDTKAKKGIMLGYSENSKAYR 518
             LN  TP E W   K S+ HLR+FG L Y  +P + R KLD K+ K +M G S+ SKAYR
Sbjct: 548  ALNDITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYR 607

Query: 519  ILDTETNNIIISSDVKFIEDNIPHITQERNSIEETIQIKGMSKLESDQVNHTNDIPAKED 698
            + D  T  I+IS DV+F E+       E  S+EE        +L  D  +H    PA E+
Sbjct: 608  LYDPATGKILISRDVQFDEER--GWEWEDKSLEE--------ELVWDNSDHE---PAGEE 654

Query: 699  VPQSVQEREETNSPPLEDNSPEEENLQENDPNNTQQESPKRPL*FRKTIEDAHAP-FMND 875
             P    E         E+   EEE + E    N        P      +     P +M D
Sbjct: 655  GP----EINHNGQQDQEETEEEEETVAETVHQNL-------PAVGTGGVRQRQQPVWMKD 703

Query: 876  YEGILTHAKRKLQE*EIECCIAEFPNIEGPKNIKTALLDQNWKDAMDKEIEMLEKRNTWN 1055
            Y  ++ +A+  + + E +  +A F   + P   + A   + W+ AM+ EI  +E+ NTW 
Sbjct: 704  Y--VVGNARVLITQDEEDEVLALFIGPDDPVCFEEAAQLEVWRKAMEAEITSIEENNTWE 761

Query: 1056 LEQLLEDKKLIG 1091
            L +L E+ K+IG
Sbjct: 762  LVELPEEAKVIG 773



 Score = 39.7 bits (91), Expect(3) = 6e-46
 Identities = 22/54 (40%), Positives = 31/54 (57%)
 Frame = +1

Query: 16  SKKSEVF*TFVTFRKKVQIQTNTKIKCFRSDNGTEFISNEFIVFFKIKE*KRNL 177
           S+KSE F  F  F+ +V+ ++  K+ C RSD G E+ S EF  + K    KR L
Sbjct: 440 SEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQL 493



 Score = 30.0 bits (66), Expect(3) = 6e-46
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 1088 WFYTTKFLPNGNIEKYKARLV 1150
            W + TKF   G ++K+KARLV
Sbjct: 776  WIFKTKFNEKGEVDKFKARLV 796


>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
            gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
            thaliana]
          Length = 1334

 Score =  162 bits (409), Expect(3) = 2e-45
 Identities = 112/312 (35%), Positives = 161/312 (51%), Gaps = 1/312 (0%)
 Frame = +3

Query: 159  GIKKELTTPYTPE*NGVSERKNRTLIEMVRSLLISSCLSQRWWGEATLTATYILNLIPRK 338
            GIK++LT  YTP+ NGV+ERKNR+++ M R +L+   + +++W EA   A YILN  P K
Sbjct: 583  GIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSK 642

Query: 339  DLNWKTPFELWFKMKTSISHLRVFGCLCYFHIPRELRKKLDTKAKKGIMLGYSENSKAYR 518
             LN  TP E W   K S+ HLR+FG L Y  +P + R KLD K+ K +M G S+ SKAYR
Sbjct: 643  ALNDITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYR 702

Query: 519  ILDTETNNIIISSDVKFIEDNIPHITQERNSIEETIQIKGMSKLESDQVNHTNDIPAKED 698
            + D  T  I+IS DV+F E+       E  S+EE        +L  D  +H    PA E+
Sbjct: 703  LYDPATGKILISRDVQFDEER--GWEWEDKSLEE--------ELVWDNSDHE---PAGEE 749

Query: 699  VPQSVQEREETNSPPLEDNSPEEENLQENDPNNTQQESPKRPL*FRKTIEDAHAP-FMND 875
             P    E         E+   EEE + E    N        P      +     P +M D
Sbjct: 750  GP----EINHNGQQDQEETEEEEETVAETVHQNL-------PAVGTGGVRQRQQPVWMKD 798

Query: 876  YEGILTHAKRKLQE*EIECCIAEFPNIEGPKNIKTALLDQNWKDAMDKEIEMLEKRNTWN 1055
            Y  ++ +A+  + + E +  +A F     P   + A   + W+ AM+ EI  +E+ NTW 
Sbjct: 799  Y--VVGNARVLITQDEEDEVLALFIGPGDPVCFEEAAQLEVWRKAMEAEITSIEENNTWE 856

Query: 1056 LEQLLEDKKLIG 1091
            L +L E+ K+IG
Sbjct: 857  LVELPEEAKVIG 868



 Score = 39.7 bits (91), Expect(3) = 2e-45
 Identities = 22/54 (40%), Positives = 31/54 (57%)
 Frame = +1

Query: 16  SKKSEVF*TFVTFRKKVQIQTNTKIKCFRSDNGTEFISNEFIVFFKIKE*KRNL 177
           S+KSE F  F  F+ +V+ ++  K+ C RSD G E+ S EF  + K    KR L
Sbjct: 535 SEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQL 588



 Score = 30.0 bits (66), Expect(3) = 2e-45
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 1088 WFYTTKFLPNGNIEKYKARLV 1150
            W + TKF   G ++K+KARLV
Sbjct: 871  WIFKTKFNEKGEVDKFKARLV 891


>emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]
          Length = 1314

 Score =  156 bits (395), Expect(3) = 4e-45
 Identities = 99/314 (31%), Positives = 160/314 (50%)
 Frame = +3

Query: 150  QNKGIKKELTTPYTPE*NGVSERKNRTLIEMVRSLLISSCLSQRWWGEATLTATYILNLI 329
            +N GI+++LTT Y+ + NGV+ERKNRT+ +M  S+L    + + +W EA  TA YILN  
Sbjct: 608  ENAGIRRQLTTGYSAQQNGVAERKNRTINDMANSMLQDKGMPKSFWAEAVNTAVYILNRS 667

Query: 330  PRKDLNWKTPFELWFKMKTSISHLRVFGCLCYFHIPRELRKKLDTKAKKGIMLGYSENSK 509
            P K +  +TPFE W+  K  I H+RVF C+CY  +P + R K D K+ + I +GY++  K
Sbjct: 668  PTKAVPNRTPFEAWYGKKPVIGHMRVFACICYAQVPAQKRVKFDNKSNRCIFVGYADGIK 727

Query: 510  AYRILDTETNNIIISSDVKFIEDNIPHITQERNSIEETIQIKGMSKLESDQVNHTNDIPA 689
             YR+ + E   IIIS DV F E    +      S    +    ++ L    ++ T+++  
Sbjct: 728  GYRLYNLEKKKIIISRDVFFDESATWNWKSPEASSTPLLPTTTIT-LGQPHMHGTHEV-- 784

Query: 690  KEDVPQSVQEREETNSPPLEDNSPEEENLQENDPNNTQQESPKRPL*FRKTIEDAHAPFM 869
            ++  P        ++S    D+SP  E     +  +T + +P+R    R  +E       
Sbjct: 785  EDHTPSPQPSSPMSSSSASSDSSPSSE-----EQISTPESAPRR---VRSMVE------- 829

Query: 870  NDYEGILTHAKRKLQE*EIECCIAEFPNIEGPKNIKTALLDQNWKDAMDKEIEMLEKRNT 1049
                 +L    ++    + E C   +  +E P++ + A    NW  AM+ EI M+EK NT
Sbjct: 830  -----LLESTSQQRGSEQHEFC--NYSVVE-PQSFQEAEKHDNWIKAMEDEIHMIEKNNT 881

Query: 1050 WNLEQLLEDKKLIG 1091
            W       D+++IG
Sbjct: 882  WEFVDRPRDREVIG 895



 Score = 39.7 bits (91), Expect(3) = 4e-45
 Identities = 20/40 (50%), Positives = 25/40 (62%)
 Frame = +1

Query: 19  KKSEVF*TFVTFRKKVQIQTNTKIKCFRSDNGTEFISNEF 138
           +KS    TF  F+  V+ Q+N KIK  RSD G E+IS EF
Sbjct: 564 EKSAALETFKKFKVMVENQSNRKIKVLRSDQGGEYISKEF 603



 Score = 34.3 bits (77), Expect(3) = 4e-45
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +2

Query: 1088 WFYTTKFLPNGNIEKYKARLV 1150
            W Y TK  P+G+++KYKARLV
Sbjct: 898  WVYKTKLNPDGSVQKYKARLV 918


>gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza sativa Japonica Group]
            gi|31429795|gb|AAP51797.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1350

 Score =  157 bits (398), Expect(3) = 6e-45
 Identities = 103/314 (32%), Positives = 159/314 (50%)
 Frame = +3

Query: 150  QNKGIKKELTTPYTPE*NGVSERKNRTLIEMVRSLLISSCLSQRWWGEATLTATYILNLI 329
            +N GI+++LT  Y+ + NGV+ERKNRT+ +M  S+L    + + +W EA  TA YILN  
Sbjct: 524  ENAGIRRQLTAGYSAQQNGVAERKNRTINDMANSMLQDKGMPKSFWAEAVNTAIYILNRS 583

Query: 330  PRKDLNWKTPFELWFKMKTSISHLRVFGCLCYFHIPRELRKKLDTKAKKGIMLGYSENSK 509
            P K +  +TPFE W+  K  I H+RVFGC+CY  +P + R K D K+   I +GY++  K
Sbjct: 584  PTKAVPNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRVKFDNKSDWCIFVGYADGIK 643

Query: 510  AYRILDTETNNIIISSDVKFIEDNIPHITQERNSIEETIQIKGMSKLESDQVNHTNDIPA 689
             YR+ + E   IIIS DV F E    +      S    +    ++ L    ++ T+ +  
Sbjct: 644  GYRLYNLEKKKIIISRDVIFDESATWNWKSPEASSTPLLPTTTIT-LGQPHMHGTHGVED 702

Query: 690  KEDVPQSVQEREETNSPPLEDNSPEEENLQENDPNNTQQESPKRPL*FRKTIEDAHAPFM 869
                PQS      ++S    D+SP  E     +  +T + +P+R    R  +E       
Sbjct: 703  HTSSPQS--SSPMSSSSASSDSSPSSE-----EQISTPESAPRR---VRSMVE------- 745

Query: 870  NDYEGILTHAKRKLQE*EIECCIAEFPNIEGPKNIKTALLDQNWKDAMDKEIEMLEKRNT 1049
                 +L    ++    + E C   +  +E P++ + A    NW  AM+ EI M+EK NT
Sbjct: 746  -----LLESTSQQRGSEQHEFC--NYSVVE-PQSFQEAEKHDNWIKAMEDEIHMIEKNNT 797

Query: 1050 WNLEQLLEDKKLIG 1091
            W L     D+K+IG
Sbjct: 798  WELVDRPRDRKVIG 811



 Score = 37.7 bits (86), Expect(3) = 6e-45
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = +1

Query: 19  KKSEVF*TFVTFRKKVQIQTNTKIKCFRSDNGTEFISNEF 138
           +KS     F  F+  V+ Q+N KIK  RSD G E+IS EF
Sbjct: 480 EKSAALEIFKKFKAMVENQSNRKIKVLRSDQGGEYISKEF 519



 Score = 34.3 bits (77), Expect(3) = 6e-45
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +2

Query: 1088 WFYTTKFLPNGNIEKYKARLV 1150
            W Y TK  P+G+++KYKARLV
Sbjct: 814  WVYKTKLNPDGSVQKYKARLV 834


>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
          Length = 1088

 Score =  159 bits (402), Expect(3) = 6e-45
 Identities = 106/317 (33%), Positives = 156/317 (49%)
 Frame = +3

Query: 141  SVFQNKGIKKELTTPYTPE*NGVSERKNRTLIEMVRSLLISSCLSQRWWGEATLTATYIL 320
            S     GI ++LT  YTP+ NGV+ERKNRT++ MVRS+L    + + +W EA     ++L
Sbjct: 328  SFCNENGILRQLTAAYTPQQNGVAERKNRTIMNMVRSMLSEKQIPKTFWPEAVNWTVHVL 387

Query: 321  NLIPRKDLNWKTPFELWFKMKTSISHLRVFGCLCYFHIPRELRKKLDTKAKKGIMLGYSE 500
            N  P   +  KTP E W   K S+ H R+FGC+ + H+P   R KLD K+ + I+LG SE
Sbjct: 388  NRSPTLAVKNKTPEEAWSGRKPSVDHFRIFGCISHVHVPDHKRVKLDAKSLRCILLGVSE 447

Query: 501  NSKAYRILDTETNNIIISSDVKFIEDNIPHITQERNSIEETIQIKGMSKLESDQVNHTND 680
             SKAYR+ D  +  IIIS DV F ED      Q +        I    + ESD+   T D
Sbjct: 448  ESKAYRLFDPISQKIIISRDVVFEEDQ-----QWKWDNSHEPAILADLEWESDEETDTED 502

Query: 681  IPAKEDVPQSVQEREETNSPPLEDNSPEEENLQENDPNNTQQESPKRPL*FRKTIEDAHA 860
                E+ P++ ++   + S   +     E   +++ P+  +   P               
Sbjct: 503  -DGNEEEPEAGEDMGNSESNDSDSFENGETTYEDSTPHEGRTRRP--------------P 547

Query: 861  PFMNDYEGILTHAKRKLQE*EIECCIAEFPNIEGPKNIKTALLDQNWKDAMDKEIEMLEK 1040
             +M DYE   T A    +E      +A F + + P     A+  + W+ AM++EIE +E+
Sbjct: 548  TWMQDYE---TGAGLSDEESVNLAQLALFTDSD-PTTYDDAVRSEKWRLAMNQEIEAIER 603

Query: 1041 RNTWNLEQLLEDKKLIG 1091
             NTW L  L    K IG
Sbjct: 604  NNTWELTDLPSGGKTIG 620



 Score = 38.9 bits (89), Expect(3) = 6e-45
 Identities = 18/40 (45%), Positives = 25/40 (62%)
 Frame = +1

Query: 28  EVF*TFVTFRKKVQIQTNTKIKCFRSDNGTEFISNEFIVF 147
           E + TF T++ KV+ +T   I+  R+D G EF SNEF  F
Sbjct: 290 EAYATFKTYKAKVEKETGAFIRSLRTDRGGEFTSNEFTSF 329



 Score = 31.6 bits (70), Expect(3) = 6e-45
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 1088 WFYTTKFLPNGNIEKYKARLV 1150
            W + TK   NG ++KYKARLV
Sbjct: 623  WIFKTKLNENGEVDKYKARLV 643


>emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera]
          Length = 1246

 Score =  154 bits (389), Expect(3) = 9e-44
 Identities = 102/315 (32%), Positives = 156/315 (49%), Gaps = 1/315 (0%)
 Frame = +3

Query: 150  QNKGIKKELTTPYTPE*NGVSERKNRTLIEMVRSLLISSCLSQRWWGEATLTATYILNLI 329
            +N GI+K+LT  Y+P+ NG SERKN T++ MV ++L    + + +W EA + + +ILN  
Sbjct: 569  ENHGIQKQLTAAYSPQQNGXSERKNXTILNMVXTILSKGHIPRSFWPEAVIWSIHILNRS 628

Query: 330  PRKDLNWKTPFELWFKMKTSISHLRVFGCLCYFHIPRELRKKLDTKAKKGIMLGYSENSK 509
            P   +   TP E W   K S++H R+FGC+ Y HIP + R KLD K +K I LG SE SK
Sbjct: 629  PTLVVQNVTPEEAWNGXKPSVNHFRIFGCIAYAHIPDQKRNKLDDKGEKCIFLGVSEMSK 688

Query: 510  AYRILDTETNNIIISSDVKFIEDNIPHITQERNSIEETIQIKGMSKLESDQVNHTND-IP 686
            AY++ +  T  I+IS D+ F E +      + N+ ++ IQ     + E ++       IP
Sbjct: 689  AYKLYNPITKKIVISHDIIFDEGSF--WKWDDNTTKQQIQANFDGENEEERQQPLQQRIP 746

Query: 687  AKEDVPQSVQEREETNSPPLEDNSPEEENLQENDPNNTQQESPKRPL*FRKTIEDAHAPF 866
            A +  P       ET+       +PE +   E    ++     KRP      + D     
Sbjct: 747  AAKIPPNEAPTTAETS-----PTTPEFDEQVEATVGSSSHRVRKRP----AWMSDYEVTG 797

Query: 867  MNDYEGILTHAKRKLQE*EIECCIAEFPNIEGPKNIKTALLDQNWKDAMDKEIEMLEKRN 1046
            ++  E  LTH    L     +C          P   ++A+ +  W+ AMD EI  +E+ +
Sbjct: 798  IDQSEDPLTHFALFL-----DC---------DPTTFESAVKESKWRKAMDXEIVAIERND 843

Query: 1047 TWNLEQLLEDKKLIG 1091
            TW L +L    K IG
Sbjct: 844  TWELSELPXGHKTIG 858



 Score = 40.8 bits (94), Expect(3) = 9e-44
 Identities = 20/43 (46%), Positives = 27/43 (62%)
 Frame = +1

Query: 19  KKSEVF*TFVTFRKKVQIQTNTKIKCFRSDNGTEFISNEFIVF 147
           +KSE F TF +F+  V+ +    IK FRSD G E+ S EF+ F
Sbjct: 525 EKSEAFSTFKSFKMLVEKEAXKPIKIFRSDXGGEYTSQEFVNF 567



 Score = 30.8 bits (68), Expect(3) = 9e-44
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 1088 WFYTTKFLPNGNIEKYKARLV 1150
            W Y TK   NG ++KYKA LV
Sbjct: 861  WVYKTKLKENGEVDKYKAXLV 881


>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  155 bits (392), Expect(3) = 4e-43
 Identities = 99/314 (31%), Positives = 160/314 (50%)
 Frame = +3

Query: 150  QNKGIKKELTTPYTPE*NGVSERKNRTLIEMVRSLLISSCLSQRWWGEATLTATYILNLI 329
            +N GI+++LT  Y+ + NGV+ERKNRT+ +M  S+L    + + +W EA  TA YILN  
Sbjct: 391  ENAGIRRQLTAGYSTQQNGVAERKNRTINDMANSMLQDKGMPKSFWAEAVNTAIYILNRS 450

Query: 330  PRKDLNWKTPFELWFKMKTSISHLRVFGCLCYFHIPRELRKKLDTKAKKGIMLGYSENSK 509
            P K +  +TPFE W+  K  I H+RVFGC+CY  +P + R K D K+ + I +GY++  K
Sbjct: 451  PTKAVPNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRVKFDNKSDRCIFVGYADGIK 510

Query: 510  AYRILDTETNNIIISSDVKFIEDNIPHITQERNSIEETIQIKGMSKLESDQVNHTNDIPA 689
             YR+ + E   III  DV F E    +      S    +    ++ L    ++ T+++  
Sbjct: 511  GYRLYNLEKKKIIIIRDVIFDESATWNWKSPEASSTPLLPTTTIT-LGQPHMHGTHEV-- 567

Query: 690  KEDVPQSVQEREETNSPPLEDNSPEEENLQENDPNNTQQESPKRPL*FRKTIEDAHAPFM 869
            ++  P        ++S    D+SP  E     +  +T + +P+R    R  +E       
Sbjct: 568  EDHTPSPQPSSPMSSSSASSDSSPSSE-----EQISTPESAPRR---VRSMVE------- 612

Query: 870  NDYEGILTHAKRKLQE*EIECCIAEFPNIEGPKNIKTALLDQNWKDAMDKEIEMLEKRNT 1049
                 +L    ++    + E C   +  +E P++ + A    NW  AM+ EI M+EK NT
Sbjct: 613  -----LLESTSQQRGSEQHEFC--NYSVVE-PQSFQEAEKHDNWIKAMEDEIHMIEKNNT 664

Query: 1050 WNLEQLLEDKKLIG 1091
            W L     D+++IG
Sbjct: 665  WELVDRPRDREVIG 678



 Score = 37.7 bits (86), Expect(3) = 4e-43
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = +1

Query: 19  KKSEVF*TFVTFRKKVQIQTNTKIKCFRSDNGTEFISNEF 138
           +KS     F  F+  V+ Q+N KIK  RSD G E+IS EF
Sbjct: 347 EKSAALEIFKKFKAMVENQSNRKIKVLRSDQGGEYISKEF 386



 Score = 30.4 bits (67), Expect(3) = 4e-43
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +2

Query: 1088 WFYTTKFLPNGNIEKYKARLV 1150
            W Y TK   +G+++KYKARLV
Sbjct: 681  WVYKTKLNLDGSVQKYKARLV 701


>gb|ACI62137.1| polyprotein [Drosophila melanogaster]
          Length = 1319

 Score =  151 bits (381), Expect(3) = 6e-43
 Identities = 106/330 (32%), Positives = 155/330 (46%), Gaps = 19/330 (5%)
 Frame = +3

Query: 159  GIKKELTTPYTPE*NGVSERKNRTLIEMVRSLLISSCLSQRWWGEATLTATYILNLIPRK 338
            GIK++LT PYTP+ NGV+ER NRT++EM +S+LI + L +  W EA  TA+Y+ N  P K
Sbjct: 550  GIKRQLTVPYTPQQNGVAERANRTIVEMAKSMLIHAKLEEFLWAEAVSTASYLRNRCPSK 609

Query: 339  DLNWKTPFELWFKMKTSISHLRVFGCLCYFHIPRELRKKLDTKAKKGIMLGYSENSKAYR 518
             L   TPFE+W   K S+ HLRVFG    F + +  + K   K K+ I +GYS  +KAYR
Sbjct: 610  ALMGATPFEIWQNRKPSVKHLRVFGSRA-FALDKTRKSKFQAKGKEYIFVGYSSTAKAYR 668

Query: 519  ILDTETNNIIISSDVKFIEDNIPH----ITQERNS-------IEETIQI-----KGMSKL 650
            + D E   I+   DVKF+E         I+++ N        +E  IQ+       M  +
Sbjct: 669  LYDREKRIIVARRDVKFVEGEFESKKCTISEQNNDFATNIIHLESNIQVPEQQRPAMPMV 728

Query: 651  ESDQVNHTNDIPAKEDVPQSVQEREETNSPPLEDNSPEEENLQENDPNNTQQESPKRPL* 830
                 N  +   + E+  + V   +E      E+  P+ +  + N P    +  P RP  
Sbjct: 729  VEQSSNSYDSCDSGEEEEEFVSASDEKQILTEEEIVPDVQEQESNAP----RRGPGRP-- 782

Query: 831  FRKTIEDAHAPFMNDYEGILTHAKRKLQE*EIECCIAEFPNIEGPKNIKTALLD---QNW 1001
              K I    +         L + +                +IE P+ +  AL     Q+W
Sbjct: 783  --KIIRSGKSGRPRKQYNSLNYIE----------------DIETPQCVGDALRGEHAQDW 824

Query: 1002 KDAMDKEIEMLEKRNTWNLEQLLEDKKLIG 1091
            K +M KE + L   NTW L  L   +K IG
Sbjct: 825  KTSMQKEYDALVSNNTWTLCDLPPGQKAIG 854



 Score = 46.6 bits (109), Expect(3) = 6e-43
 Identities = 23/52 (44%), Positives = 31/52 (59%)
 Frame = +1

Query: 22  KSEVF*TFVTFRKKVQIQTNTKIKCFRSDNGTEFISNEFIVFFKIKE*KRNL 177
           K+EVF  F  F+  V+ QT  KIK  RSDNGTE+++ +F  +      KR L
Sbjct: 504 KNEVFDKFKLFKSYVECQTGKKIKALRSDNGTEYVNRQFTEYLNTCGIKRQL 555



 Score = 25.4 bits (54), Expect(3) = 6e-43
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 1088 WFYTTKFLPNGNIEKYKARLV 1150
            W +  K    GNI+K+K+RLV
Sbjct: 857  WVFRVKRDKEGNIQKFKSRLV 877


>emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera]
          Length = 894

 Score =  155 bits (393), Expect(2) = 1e-42
 Identities = 68/139 (48%), Positives = 100/139 (71%)
 Frame = +3

Query: 159 GIKKELTTPYTPE*NGVSERKNRTLIEMVRSLLISSCLSQRWWGEATLTATYILNLIPRK 338
           GI+ +LTTPYTP+ NGVSERKNRT++EM R LL    +   +W EA  T+ Y+LN +P K
Sbjct: 177 GIECQLTTPYTPQQNGVSERKNRTVMEMARCLLFEKKMPSNFWAEAVNTSVYLLNRLPTK 236

Query: 339 DLNWKTPFELWFKMKTSISHLRVFGCLCYFHIPRELRKKLDTKAKKGIMLGYSENSKAYR 518
            L  KTP+E W+ +K  ++HL++FG +CY+H+P   R KLD++A+KGI++GY  ++K YR
Sbjct: 237 SLKNKTPYEEWYGVKPFVNHLKIFGSICYYHVPEPKRSKLDSRAQKGILIGYGTSTKGYR 296

Query: 519 ILDTETNNIIISSDVKFIE 575
           I   +TN +++S +VK  E
Sbjct: 297 IFCLQTNKVVLSRNVKVDE 315



 Score = 45.4 bits (106), Expect(2) = 1e-42
 Identities = 21/42 (50%), Positives = 29/42 (69%)
 Frame = +1

Query: 22  KSEVF*TFVTFRKKVQIQTNTKIKCFRSDNGTEFISNEFIVF 147
           K+EVF  F  F+  V+ Q+N  IK  RSDNGTE+ S++F+ F
Sbjct: 131 KNEVFSVFKQFKALVENQSNLSIKILRSDNGTEYTSSQFVEF 172


>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
          Length = 1339

 Score =  150 bits (379), Expect(3) = 4e-42
 Identities = 102/312 (32%), Positives = 148/312 (47%), Gaps = 6/312 (1%)
 Frame = +3

Query: 150  QNKGIKKELTTPYTPE*NGVSERKNRTLIEMVRSLLISSCLSQRWWGEATLTATYILNLI 329
            ++ GI ++LT  +TP+ NGV+ERKNRT++  VRS+L    + + +W EAT  + +I N  
Sbjct: 579  RSHGISRQLTAAFTPQQNGVAERKNRTIMNAVRSMLSERQVPKMFWSEATKWSVHIQNRS 638

Query: 330  PRKDLNWKTPFELWFKMKTSISHLRVFGCLCYFHIPRELRKKLDTKAKKGIMLGYSENSK 509
            P   +   TP E W   K  + + RVFGC+ Y HIP + R KLD K+KK + LG SE SK
Sbjct: 639  PTAAVEGMTPEEAWSGRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSKKCVFLGVSEESK 698

Query: 510  AYRILDTETNNIIISSDVKFIEDNIPHITQERNSIEETIQIKGMSKLESDQVNHTNDIPA 689
            A+R+ D     I+IS DV F ED                        + DQ     D+ A
Sbjct: 699  AWRLYDPVMKKIVISKDVVFDED---------------------KSWDWDQA----DVEA 733

Query: 690  KEDVPQSVQEREETNSPPLE------DNSPEEENLQENDPNNTQQESPKRPL*FRKTIED 851
            KE   +   E +E NS  +E       N    +N   + P          P+  + T E 
Sbjct: 734  KEVTLECGDEDDEKNSEVVEPIAVASPNHVGSDNNVSSSPILAPSSPAPSPVAAKVTRER 793

Query: 852  AHAPFMNDYEGILTHAKRKLQE*EIECCIAEFPNIEGPKNIKTALLDQNWKDAMDKEIEM 1031
                +M DYE   T    +++E  +   +        P     A+ D+ W++AM+ EIE 
Sbjct: 794  RPPGWMADYE---TGEGEEIEE-NLSVMLLMMMTEADPIQFDDAVKDKIWREAMEHEIES 849

Query: 1032 LEKRNTWNLEQL 1067
            + K NTW L  L
Sbjct: 850  IVKNNTWELTTL 861



 Score = 39.3 bits (90), Expect(3) = 4e-42
 Identities = 18/40 (45%), Positives = 24/40 (60%)
 Frame = +1

Query: 19  KKSEVF*TFVTFRKKVQIQTNTKIKCFRSDNGTEFISNEF 138
           +KSE F TF  F+  V+ +    + C R+D G EF SNEF
Sbjct: 535 EKSEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTSNEF 574



 Score = 30.8 bits (68), Expect(3) = 4e-42
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 1088 WFYTTKFLPNGNIEKYKARLV 1150
            W Y TK   +G ++KYKARLV
Sbjct: 872  WVYKTKLNEDGEVDKYKARLV 892


>gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1347

 Score =  169 bits (428), Expect(3) = 5e-42
 Identities = 106/316 (33%), Positives = 168/316 (53%), Gaps = 3/316 (0%)
 Frame = +3

Query: 150  QNKGIKKELTTPYTPE*NGVSERKNRTLIEMVRSLLISSCLSQRWWGEATLTATYILNLI 329
            +++GI +++T PY+P+ NG +ERKNR+L+EM RS+L+   L  + W EA  T+ Y+ N +
Sbjct: 589  EDEGINRQVTLPYSPQQNGAAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAYLQNRL 648

Query: 330  PRKDLNWK-TPFELWFKMKTSISHLRVFGCLCYFHIPRELRKKLDTKAKKGIMLGYSENS 506
            P K +    TP E W   K ++SHLR+FG +CY HIP + R+KLD KAK GI++GYS  +
Sbjct: 649  PSKAIEDDVTPMEKWCGHKPNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYSNQT 708

Query: 507  KAYRILDTETNNIIISSDVKFIEDNIPHITQERNSIEET--IQIKGMSKLESDQVNHTND 680
            K YR+   E   + +S DV F ED       ++  +++T  + I  + +    Q   ++D
Sbjct: 709  KGYRVFLLEDEKVEVSRDVVFQEDK-KWDWDKQEEVKKTFVMSINDIQESRDQQETSSHD 767

Query: 681  IPAKEDVPQSVQEREETNSPPLEDNSPEEENLQENDPNNTQQESPKRPL*FRKTIEDAHA 860
            +   +D   +     ET+S  L   + +EE            ESPK+    ++ +E   A
Sbjct: 768  LSQIDD--HANNGEGETSSHVLSQVNDQEE--------RETSESPKKYKSMKEILE--KA 815

Query: 861  PFMNDYEGILTHAKRKLQE*EIECCIAEFPNIEGPKNIKTALLDQNWKDAMDKEIEMLEK 1040
            P M + E              IE C+      E P+    A  D+ W++AM++EI+++EK
Sbjct: 816  PRMENDEAAQ----------GIEACLVA---NEEPQTYDEARGDKEWEEAMNEEIKVIEK 862

Query: 1041 RNTWNLEQLLEDKKLI 1088
              TW L    E K +I
Sbjct: 863  NRTWKLVDKPEKKNVI 878



 Score = 26.6 bits (57), Expect(3) = 5e-42
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 19  KKSEVF*TFVTFRKKVQIQTNTKIKCFR 102
           +KSE F TF  F+  V+ Q+N  IK  R
Sbjct: 555 QKSETFATFKKFKALVEKQSNCSIKTLR 582



 Score = 24.3 bits (51), Expect(3) = 5e-42
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 1088 WFYTTKFLPNGNIEKYKARLV 1150
            W Y  K   +GN  K+KARLV
Sbjct: 882  WIYKIKTDASGNHVKHKARLV 902


>gb|AAK12626.1| unknown protein [Aedes aegypti]
          Length = 1298

 Score =  177 bits (450), Expect = 5e-42
 Identities = 115/324 (35%), Positives = 165/324 (50%), Gaps = 3/324 (0%)
 Frame = +3

Query: 129  K*IHSVFQNKGIKKELTTPYTPE*NGVSERKNRTLIEMVRSLLISSCLSQRWWGEATLTA 308
            K +   ++  GIK + TTPYTP+ NGV+ERKNR++ EM   +L+ S L +R+WGEA LTA
Sbjct: 549  KLLRDFYRANGIKPQFTTPYTPQSNGVAERKNRSITEMATCMLLDSGLDKRFWGEAVLTA 608

Query: 309  TYILNLIPRKDLNWKTPFELWFKMKTSISHLRVFGCLCYFHIPRELRKKLDTKAKKGIML 488
            TYI N IP + +  KTPFE+W+  K  + HLRVFG   Y H+P   R K+D KAK+ I +
Sbjct: 609  TYIQNRIPSRSVP-KTPFEMWWGRKPDLGHLRVFGSPAYVHVPDVKRSKMDPKAKRLIFV 667

Query: 489  GYSENSKAYRILDTETNNIIISSDVKFIEDNIPHITQERNSIEETIQIKGMSKLESDQVN 668
            GYS   K YR +DTET+ I IS D +FIE          +S+E      G SK +++   
Sbjct: 668  GYSMEHKGYRFVDTETDCITISRDARFIEQE-----NGTSSVEIPTSENGTSKKQANGEI 722

Query: 669  HTNDIPAKEDVPQSVQEREETNSPPLEDNS---PEEENLQENDPNNTQQESPKRPL*FRK 839
            + N    + D  +  +E EE ++P  E +    P   + +EN      +  PK       
Sbjct: 723  NPNPFKEETDTEEISEEEEEFSTPRAESSGVSGPVRRSAREN------RTIPKH------ 770

Query: 840  TIEDAHAPFMNDYEGILTHAKRKLQE*EIECCIAEFPNIEGPKNIKTALLDQNWKDAMDK 1019
                     + DY  +L +A        I  C      +E P N   AL    W+ AM  
Sbjct: 771  ---------LEDY--LLEYAVG------IAACA-----VEEPDNHLEALESAEWRTAMKD 808

Query: 1020 EIEMLEKRNTWNLEQLLEDKKLIG 1091
            E++  ++  TW L  L   +K +G
Sbjct: 809  EMDSHQRNGTWELVPLPPGRKPVG 832


>gb|ADK92880.1| retrotransposon 4 protein [Hypericum perforatum]
          Length = 1347

 Score =  156 bits (395), Expect(3) = 1e-41
 Identities = 107/348 (30%), Positives = 157/348 (45%), Gaps = 38/348 (10%)
 Frame = +3

Query: 159  GIKKELTTPYTPE*NGVSERKNRTLIEMVRSLLISSCLSQRWWGEATLTATYILNLIPRK 338
            GI  + T  YTP+ NGV+ERKNR L+ + R+++    + +R+W +A LTA +++N IP  
Sbjct: 557  GIIHQTTCVYTPQQNGVAERKNRHLLNVARAMMFKMNVKKRFWSDAVLTACHLINRIPSA 616

Query: 339  DLNWKTPFELWFKMKTSISHLRVFGCLCYFHIPRELRKKLDTKAKKGIMLGYSENSKAYR 518
              +   P E+    K  +S+LRVFGC C+ H+P   R KLD +A K I LGYS N K YR
Sbjct: 617  TTSGLAPIEILLNKKPDLSYLRVFGCCCFVHVPAGKRDKLDKRAVKCIFLGYSRNQKGYR 676

Query: 519  ILDTETNNIIISSDVKFIEDNIPHIT-QERNSIEETIQIKGMSKLESDQVNHTNDIPAKE 695
              D E+    IS DV+FIED       +E NS  E       S L    VN   D    +
Sbjct: 677  CFDPESGQRFISRDVRFIEDQAFFCNDKEYNSQGELFDQLSNSSLYPGSVNLFFDGAGHQ 736

Query: 696  DVPQSVQEREETNSPPLE-------DNSPEEENLQENDPNNTQQESPKRPL*FRKTIEDA 854
                  +  + TNS P +       +N   E  L  N  +   Q S            D 
Sbjct: 737  LSADHEESADNTNSSPTDAINLRNFENCSSESELGSNGIHEQNQVSDSSESDSTNCSNDC 796

Query: 855  HAPFMNDY----EGILTHAKR------KLQE*EIECC--------------------IAE 944
             +          +  L  + R      KL+E E  CC                    I++
Sbjct: 797  DSTVQEQINIPGDINLKRSSRTKFQNCKLKEYETYCCAYPIENYISYANIKPSYQAYISK 856

Query: 945  FPNIEGPKNIKTALLDQNWKDAMDKEIEMLEKRNTWNLEQLLEDKKLI 1088
              N+  P   + A+  + W+ AM++E++ LE+  TW + +L  +KK I
Sbjct: 857  LDNLHEPTKFEDAVKIEAWRKAMNEELDALERNQTWTVVELPHNKKAI 904



 Score = 33.1 bits (74), Expect(3) = 1e-41
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +1

Query: 22  KSEVF*TFVTFRKKVQIQTNTKIKCFRSDNGTEFI 126
           K EVF  F  F   V+ Q + KIK  R+DNGT+++
Sbjct: 512 KHEVFSVFKEFHNLVRNQFDKKIKILRTDNGTKYM 546



 Score = 29.3 bits (64), Expect(3) = 1e-41
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 1079 ETHWFYTTKFLPNGNIEKYKARLV 1150
            ++ W Y  K   +G+IE+YKARLV
Sbjct: 905  DSKWIYKIKQNADGSIERYKARLV 928


>ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255821 [Solanum
            lycopersicum]
          Length = 1125

 Score =  151 bits (381), Expect(3) = 2e-41
 Identities = 102/331 (30%), Positives = 159/331 (48%), Gaps = 16/331 (4%)
 Frame = +3

Query: 147  FQNKGIKKELTTPYTPE*NGVSERKNRTLIEMVRSLLISSCLSQRWWGEATLTATYILNL 326
            FQ KGI  + T PYTP+ NGV ERK++ L+E  R+LL  S L  R+WGE  LTA YI+N 
Sbjct: 745  FQTKGIIHQKTCPYTPQQNGVVERKHKYLLETARALLFQSKLPLRYWGECVLTAIYIINR 804

Query: 327  IPRKDLNWKTPFELWFKMKTSISHLRVFGCLCYFHIPRELRKKLDTKAKKGIMLGYSENS 506
            +P K L  K+P+E  +  + + SHL+ FGCLC+  + +  + K + +    + +GY  N+
Sbjct: 805  LPTKLLQNKSPYETLYLKQPTYSHLKSFGCLCFPTVLKTHKDKFEPRGIPHVFVGYPFNT 864

Query: 507  KAYRILDTETNNIIISSDVKFIEDNIP--HITQERNSIEETIQIKGMSKLESDQVNHTND 680
            K Y++L+  T  + IS DV F E   P  H+  + +S    +++   S   S     TN 
Sbjct: 865  KGYKVLNLATKKVHISRDVVFHERMFPFVHVPDDDSSFSSVLKLLTHSVKISCMPGKTN- 923

Query: 681  IPAKEDVPQSVQEREETNSPPLEDNSPEEENLQENDPNNTQQESPKRPL*FRKTIEDAHA 860
            I A +++  ++   E T     ED      N+ E    +   + P+ P   R+T    + 
Sbjct: 924  IFATDEMLDNLTPHEVT-----EDQVTNTTNIHETTSADFTTQVPQEP---RRTSRTINT 975

Query: 861  P-FMNDYEGILT--HAKRKLQE*EIECC-----------IAEFPNIEGPKNIKTALLDQN 998
            P ++ DY   L   H+           C           +    +   P   + A+L   
Sbjct: 976  PSYLKDYTYNLPKLHSLNTFVSHNNHVCFNSLCSDSQQLVTTISHECEPNTFEEAILHPA 1035

Query: 999  WKDAMDKEIEMLEKRNTWNLEQLLEDKKLIG 1091
            W+ AM  E E L   +TW +  L ++KK IG
Sbjct: 1036 WQQAMTHEFEALHANDTWEMVMLPDEKKAIG 1066



 Score = 38.9 bits (89), Expect(3) = 2e-41
 Identities = 19/46 (41%), Positives = 26/46 (56%)
 Frame = +1

Query: 22  KSEVF*TFVTFRKKVQIQTNTKIKCFRSDNGTEFISNEFIVFFKIK 159
           KS    T   F   ++ +  TK+K  RSDNG EF S+E + FF+ K
Sbjct: 703 KSNALQTIKAFVSLIENEFQTKLKAIRSDNGLEFTSSEAVHFFQTK 748



 Score = 27.7 bits (60), Expect(3) = 2e-41
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 1088 WFYTTKFLPNGNIEKYKARLV 1150
            W Y  K   +G+IE++KARLV
Sbjct: 1069 WVYKIKHKADGSIERFKARLV 1089


>gb|EOY08837.1| Uncharacterized protein TCM_024078 [Theobroma cacao]
          Length = 703

 Score =  157 bits (396), Expect(2) = 3e-41
 Identities = 100/306 (32%), Positives = 153/306 (50%)
 Frame = +3

Query: 141  SVFQNKGIKKELTTPYTPE*NGVSERKNRTLIEMVRSLLISSCLSQRWWGEATLTATYIL 320
            S  + +GI  +LT PY PE NGVSERKNRT+IEM R LL    L + +W EAT TA Y+ 
Sbjct: 454  SYLEKEGIHHQLTAPYCPEQNGVSERKNRTIIEMSRCLLFEKKLPKSFWAEATNTAVYLQ 513

Query: 321  NLIPRKDLNWKTPFELWFKMKTSISHLRVFGCLCYFHIPRELRKKLDTKAKKGIMLGYSE 500
            N++  + +N +TP+E+W+ ++ S+ HLR+FG +CY H+P ELR KL  KAK G+ +GYS+
Sbjct: 514  NILITQAVNNETPYEVWYSIRPSVDHLRIFGSICYLHVPDELRDKLQPKAKLGVFIGYSQ 573

Query: 501  NSKAYRILDTETNNIIISSDVKFIEDNIPHITQERNSIEETIQIKGMSKLESDQVNHTND 680
             SKA RI   E+  + +S  V F  D   +   E+N ++ T   K + +  + Q+ ++ +
Sbjct: 574  QSKACRIYQIESGTVSVSIHVTF--DEGAYWNWEKNQMQHT---KFLDEDVNLQLANSEE 628

Query: 681  IPAKEDVPQSVQEREETNSPPLEDNSPEEENLQENDPNNTQQESPKRPL*FRKTIEDAHA 860
            I   E +          + PP+ D      +LQE                          
Sbjct: 629  ILDAEQI---------VDEPPVRDT----RSLQE-------------------------- 649

Query: 861  PFMNDYEGILTHAKRKLQE*EIECCIAEFPNIEGPKNIKTALLDQNWKDAMDKEIEMLEK 1040
                 YE                C +A F     P   + A++   WK+AM++E++M+  
Sbjct: 650  ----IYE---------------SCNVAVF----DPATPEEAIVLPGWKEAMEEEMKMINL 686

Query: 1041 RNTWNL 1058
              TW+L
Sbjct: 687  NKTWSL 692



 Score = 39.7 bits (91), Expect(2) = 3e-41
 Identities = 18/44 (40%), Positives = 29/44 (65%)
 Frame = +1

Query: 22  KSEVF*TFVTFRKKVQIQTNTKIKCFRSDNGTEFISNEFIVFFK 153
           KSEVF  F  F+ KV+ ++  +IK  R++NG E+ S+EF  + +
Sbjct: 414 KSEVFSVFQKFKAKVENESGCRIKILRTNNGGEYTSSEFTSYLE 457


>gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108708461|gb|ABF96256.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1167

 Score =  158 bits (400), Expect(2) = 4e-41
 Identities = 100/314 (31%), Positives = 162/314 (51%)
 Frame = +3

Query: 150  QNKGIKKELTTPYTPE*NGVSERKNRTLIEMVRSLLISSCLSQRWWGEATLTATYILNLI 329
            +N GI+++LT  Y+ + NGV+ERKNRT+ +M  S+L    + + +W EA  TA YILN  
Sbjct: 475  ENAGIRRQLTAGYSAQQNGVAERKNRTINDMANSMLQDKGMPKSFWAEAVNTAIYILNRS 534

Query: 330  PRKDLNWKTPFELWFKMKTSISHLRVFGCLCYFHIPRELRKKLDTKAKKGIMLGYSENSK 509
            P K +  +TPFE W+  K  I H+RVFGC+CY  +P + R K D K+ + I +GY++  K
Sbjct: 535  PTKAVPNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRVKFDNKSDRCIFVGYADGIK 594

Query: 510  AYRILDTETNNIIISSDVKFIEDNIPHITQERNSIEETIQIKGMSKLESDQVNHTNDIPA 689
             YR+ + E   IIIS DV F E    +    + S    +    ++ L    ++ T+++  
Sbjct: 595  GYRLYNLEKKKIIISRDVIFDESATWNWKSPKASSTPLLPTTTIT-LGQPHMHGTHEV-- 651

Query: 690  KEDVPQSVQEREETNSPPLEDNSPEEENLQENDPNNTQQESPKRPL*FRKTIEDAHAPFM 869
            ++  P        ++S    D+SP  E     +  +T + +P+R    R  +E       
Sbjct: 652  EDHTPSPQPSSPMSSSSASSDSSPSSE-----EQISTPESAPRR---VRSMVE------- 696

Query: 870  NDYEGILTHAKRKLQE*EIECCIAEFPNIEGPKNIKTALLDQNWKDAMDKEIEMLEKRNT 1049
                 +L    ++    + E C   +  +E P++ + A    NW  AM+ EI M+EK NT
Sbjct: 697  -----LLESTSQQRGSEQHEFC--NYSVVE-PQSFQEAEKHDNWIKAMEDEIHMIEKNNT 748

Query: 1050 WNLEQLLEDKKLIG 1091
            W L     D+++IG
Sbjct: 749  WELVDRPRDREVIG 762



 Score = 37.7 bits (86), Expect(2) = 4e-41
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = +1

Query: 19  KKSEVF*TFVTFRKKVQIQTNTKIKCFRSDNGTEFISNEF 138
           +KS     F  F+  V+ Q+N KIK  RSD G E+IS EF
Sbjct: 431 EKSAALEIFKKFKAMVENQSNRKIKVLRSDQGGEYISKEF 470