BLASTX nr result

ID: Ephedra27_contig00011545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00011545
         (1517 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [A...   306   2e-80
ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containin...   281   7e-73
ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containin...   281   7e-73
ref|XP_006447767.1| hypothetical protein CICLE_v10014902mg [Citr...   281   7e-73
ref|XP_001771275.1| predicted protein [Physcomitrella patens] gi...   281   7e-73
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin...   278   3e-72
emb|CBI28414.3| unnamed protein product [Vitis vinifera]              278   6e-72
gb|EOX93474.1| CCCH-type zinc fingerfamily protein with RNA-bind...   276   2e-71
ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containin...   275   3e-71
ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containin...   275   3e-71
gb|EMJ15058.1| hypothetical protein PRUPE_ppa019338mg [Prunus pe...   275   3e-71
ref|XP_002320513.1| RNA recognition motif-containing family prot...   273   1e-70
ref|XP_001758251.1| predicted protein [Physcomitrella patens] gi...   273   1e-70
gb|EOY12131.1| RNA binding protein, putative isoform 3, partial ...   273   2e-70
gb|EOY12129.1| RNA binding protein, putative isoform 1 [Theobrom...   273   2e-70
gb|EOY12130.1| RNA binding protein, putative isoform 2 [Theobrom...   272   2e-70
gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus pe...   272   3e-70
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu...   272   3e-70
ref|XP_006452534.1| hypothetical protein CICLE_v10007876mg [Citr...   270   2e-69
ref|XP_006452532.1| hypothetical protein CICLE_v10007876mg [Citr...   270   2e-69

>ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [Amborella trichopoda]
            gi|548839320|gb|ERM99613.1| hypothetical protein
            AMTR_s00088p00158600 [Amborella trichopoda]
          Length = 575

 Score =  306 bits (783), Expect = 2e-80
 Identities = 199/468 (42%), Positives = 269/468 (57%), Gaps = 24/468 (5%)
 Frame = +1

Query: 7    PQQEEDQESAQSMNLSRHQSLPSDLKFRDHQEQNYGSSDEMYTFGNGHRRSYSMTDVSLA 186
            P++   Q  A S+ L       + L      E  Y             RR+ SM ++   
Sbjct: 135  PEEYRFQNQAHSLGLDDQLEPVNPLGAELQNEYFYQEPTLASLSARTSRRTSSMPEIP-- 192

Query: 187  VSPKPCIYFARGFCKHGNACRFSHD------VIRQVSVVEEDS-------THQTXXXXXX 327
               K C+YF RGFCKHGN CRF H        +   S    +S       +  T      
Sbjct: 193  --SKLCVYFQRGFCKHGNNCRFFHGQHGLDHFLTGFSTSPTESLGDDHMISSGTLERLEM 250

Query: 328  XXXXXXXXXXSPVSIAFLPQLYYERFGKVLQADGYLTESQRHGRTGYSLTNLLARLKNTV 507
                      +P+SIA LPQLYYERFGK LQA+GYLTESQRHG+ GYSLT LLARLKN++
Sbjct: 251  ELLQLLRAKRTPISIASLPQLYYERFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSI 310

Query: 508  TLIDRPHGQHAVVLTED------FKAEQHCFNS-ASGCRQIYMTFPAESTFNEEDVSNYF 666
             LIDRPHGQHAVVL ED      ++++++   +  +G RQIY+TFPAESTF EEDVSNYF
Sbjct: 311  RLIDRPHGQHAVVLAEDAAKYTEYRSDRNDPGAIVAGSRQIYLTFPAESTFTEEDVSNYF 370

Query: 667  SIYGPVQDVRIPYQQKRMFGFVTYVFPETVKLILSKGNPHYVCGARVLVKPYKEKT---- 834
              +GPVQDVRIP QQKRMFGFVT+++PETVK+IL+KGNPH+VCGARVLVKPY+EK+    
Sbjct: 371  RTFGPVQDVRIPCQQKRMFGFVTFMYPETVKMILNKGNPHFVCGARVLVKPYREKSRLVD 430

Query: 835  RKNVERAEQPRSVPFSFNVDAREYEFCSGPGLFQNSLLTSKQIDQQEQELAIEFERLCLT 1014
            RK  E+ + P  V +S +    E E+ S PG++ ++ L  KQ+ ++EQE AIE ER  L+
Sbjct: 431  RKYPEKIDHP--VYYSPHFLDMEPEYQSVPGIWDDARLIRKQL-REEQEHAIELERRRLS 487

Query: 1015 NIHSTQPSDQPNHTIPLQRSFTSNSVGKTHEAEEKEISSVLEDPNGFTLQAEQFRYLLDV 1194
                           PL  ++        +  ++ ++S   ED NGF    ++F YLLDV
Sbjct: 488  EFQMASK--------PLSHNYFG------YPMDDFKLS---EDQNGFP-STDRFGYLLDV 529

Query: 1195 LDSEQNDITDQSQIPECQWSEILDTSETRNTNFSVFNHPTSESSNSKI 1338
            L+S+     D+++     +S+  ++S+  N   S F  P + S ++ I
Sbjct: 530  LNSDSAS-DDKTRHASGNYSD-QESSQGLNLPESPFASPITNSISTVI 575


>ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like isoform
            X4 [Citrus sinensis]
          Length = 578

 Score =  281 bits (718), Expect = 7e-73
 Identities = 183/391 (46%), Positives = 228/391 (58%), Gaps = 27/391 (6%)
 Frame = +1

Query: 145  GHRRSYSMTDVSLAVSP-KPCIYFARGFCKHGNACRFSH-----DVIRQV------SVVE 288
            GH R+ S    SL   P K C YF +GFCKHGN CR+ H     +   Q+       +  
Sbjct: 176  GHVRT-SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRN 234

Query: 289  ED---STHQTXXXXXXXXXXXXXXXXSPVSIAFLPQLYYERFGKVLQADGYLTESQRHGR 459
            ED   S                     P+SIA LP +YYE++GK LQA+GYLTESQRHG+
Sbjct: 235  EDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGK 294

Query: 460  TGYSLTNLLARLKNTVTLIDRPHGQHAVVLTEDFKAEQHCFNSAS-------GCRQIYMT 618
             GYSLT LLARLKN++ LIDRPHGQH+V+L ED           S       G RQIY+T
Sbjct: 295  AGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPNYLEYSGEKSDPGGIVAGSRQIYLT 354

Query: 619  FPAESTFNEEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTYVFPETVKLILSKGNPHYVCG 798
            FPAESTF E+DVSNYFS +GPVQDVRIP QQKRMFGFVT+VF ETVK IL+KGNPH+VCG
Sbjct: 355  FPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414

Query: 799  ARVLVKPYKEKT----RKNVERAEQPRSVPFSFNVDAREYEFCSGPGLFQNSLLTSKQID 966
            ARVLVKPY+EK+    RK VE+ + P      F     + E  + P +  NS L  KQ+ 
Sbjct: 415  ARVLVKPYREKSRLVDRKYVEKMQHPLFCSLHFT--DGDTELHTMPRVCNNSRLLRKQL- 471

Query: 967  QQEQELAIEFERLCLTNIHSTQPSDQP-NHTIPLQRSFTSNSVGKTHEAEEKEISSVLED 1143
             +E E AIE ER  L+ +   Q + +P NH      S+   S+      +E ++S    +
Sbjct: 472  MEEHEQAIELERRRLSEM---QLACKPMNH-----HSYFGYSM------DELQVSEAPAE 517

Query: 1144 PNGFTLQAEQFRYLLDVLDSEQNDITDQSQI 1236
               F   AE+F YLLDVL+   N  T + Q+
Sbjct: 518  QGDFP-SAERFNYLLDVLN---NGSTSEDQV 544


>ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like isoform
            X3 [Citrus sinensis]
          Length = 579

 Score =  281 bits (718), Expect = 7e-73
 Identities = 183/391 (46%), Positives = 228/391 (58%), Gaps = 27/391 (6%)
 Frame = +1

Query: 145  GHRRSYSMTDVSLAVSP-KPCIYFARGFCKHGNACRFSH-----DVIRQV------SVVE 288
            GH R+ S    SL   P K C YF +GFCKHGN CR+ H     +   Q+       +  
Sbjct: 176  GHVRT-SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRN 234

Query: 289  ED---STHQTXXXXXXXXXXXXXXXXSPVSIAFLPQLYYERFGKVLQADGYLTESQRHGR 459
            ED   S                     P+SIA LP +YYE++GK LQA+GYLTESQRHG+
Sbjct: 235  EDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGK 294

Query: 460  TGYSLTNLLARLKNTVTLIDRPHGQHAVVLTEDFKAEQHCFNSAS-------GCRQIYMT 618
             GYSLT LLARLKN++ LIDRPHGQH+V+L ED           S       G RQIY+T
Sbjct: 295  AGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPNYLEYSGEKSDPGGIVAGSRQIYLT 354

Query: 619  FPAESTFNEEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTYVFPETVKLILSKGNPHYVCG 798
            FPAESTF E+DVSNYFS +GPVQDVRIP QQKRMFGFVT+VF ETVK IL+KGNPH+VCG
Sbjct: 355  FPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 414

Query: 799  ARVLVKPYKEKT----RKNVERAEQPRSVPFSFNVDAREYEFCSGPGLFQNSLLTSKQID 966
            ARVLVKPY+EK+    RK VE+ + P      F     + E  + P +  NS L  KQ+ 
Sbjct: 415  ARVLVKPYREKSRLVDRKYVEKMQHPLFCSLHFT--DGDTELHTMPRVCNNSRLLRKQL- 471

Query: 967  QQEQELAIEFERLCLTNIHSTQPSDQP-NHTIPLQRSFTSNSVGKTHEAEEKEISSVLED 1143
             +E E AIE ER  L+ +   Q + +P NH      S+   S+      +E ++S    +
Sbjct: 472  MEEHEQAIELERRRLSEM---QLACKPMNH-----HSYFGYSM------DELQVSEAPAE 517

Query: 1144 PNGFTLQAEQFRYLLDVLDSEQNDITDQSQI 1236
               F   AE+F YLLDVL+   N  T + Q+
Sbjct: 518  QGDFP-SAERFNYLLDVLN---NGSTSEDQV 544


>ref|XP_006447767.1| hypothetical protein CICLE_v10014902mg [Citrus clementina]
            gi|557550378|gb|ESR61007.1| hypothetical protein
            CICLE_v10014902mg [Citrus clementina]
          Length = 524

 Score =  281 bits (718), Expect = 7e-73
 Identities = 183/391 (46%), Positives = 228/391 (58%), Gaps = 27/391 (6%)
 Frame = +1

Query: 145  GHRRSYSMTDVSLAVSP-KPCIYFARGFCKHGNACRFSH-----DVIRQV------SVVE 288
            GH R+ S    SL   P K C YF +GFCKHGN CR+ H     +   Q+       +  
Sbjct: 121  GHVRT-SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRN 179

Query: 289  ED---STHQTXXXXXXXXXXXXXXXXSPVSIAFLPQLYYERFGKVLQADGYLTESQRHGR 459
            ED   S                     P+SIA LP +YYE++GK LQA+GYLTESQRHG+
Sbjct: 180  EDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGK 239

Query: 460  TGYSLTNLLARLKNTVTLIDRPHGQHAVVLTEDFKAEQHCFNSAS-------GCRQIYMT 618
             GYSLT LLARLKN++ LIDRPHGQH+V+L ED           S       G RQIY+T
Sbjct: 240  AGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPNYLEYSGEKSDPGGIVAGSRQIYLT 299

Query: 619  FPAESTFNEEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTYVFPETVKLILSKGNPHYVCG 798
            FPAESTF E+DVSNYFS +GPVQDVRIP QQKRMFGFVT+VF ETVK IL+KGNPH+VCG
Sbjct: 300  FPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCG 359

Query: 799  ARVLVKPYKEKT----RKNVERAEQPRSVPFSFNVDAREYEFCSGPGLFQNSLLTSKQID 966
            ARVLVKPY+EK+    RK VE+ + P      F     + E  + P +  NS L  KQ+ 
Sbjct: 360  ARVLVKPYREKSRLVDRKYVEKMQHPLFCSLHFT--DGDTELHTMPRVCNNSRLLRKQL- 416

Query: 967  QQEQELAIEFERLCLTNIHSTQPSDQP-NHTIPLQRSFTSNSVGKTHEAEEKEISSVLED 1143
             +E E AIE ER  L+ +   Q + +P NH      S+   S+      +E ++S    +
Sbjct: 417  MEEHEQAIELERRRLSEM---QLACKPMNH-----HSYFGYSM------DELQVSEAPAE 462

Query: 1144 PNGFTLQAEQFRYLLDVLDSEQNDITDQSQI 1236
               F   AE+F YLLDVL+   N  T + Q+
Sbjct: 463  QGDFP-SAERFNYLLDVLN---NGSTSEDQV 489


>ref|XP_001771275.1| predicted protein [Physcomitrella patens]
           gi|162677364|gb|EDQ63835.1| predicted protein
           [Physcomitrella patens]
          Length = 386

 Score =  281 bits (718), Expect = 7e-73
 Identities = 160/289 (55%), Positives = 190/289 (65%), Gaps = 19/289 (6%)
 Frame = +1

Query: 22  DQESAQSMNLSRHQSLPSDLKFRDHQ-EQNYG----SSDEMYTFGNGHRRSY-----SMT 171
           DQ S+ S    R  SL +   F DH   + Y     S + +++  +  R S      S  
Sbjct: 102 DQMSSLSDAFDRQNSLHA---FYDHYYPETYAFLNSSKEFLHSRSSSSRASLAVDSSSSP 158

Query: 172 DVSLAVSPKPCIYFARGFCKHGNACRFSHDVIRQVSVVEEDSTHQTXXXXXXXXXXXXXX 351
           D+  A++ KPC+YFARG+CKHG++CRF H +       ++     +              
Sbjct: 159 DLGPALAWKPCLYFARGYCKHGSSCRFLHGM-------DDGMAPGSLERLEIELQELLRG 211

Query: 352 XXSPVSIAFLPQLYYERFGKVLQADGYLTESQRHGRTGYSLTNLLARLKNTVTLIDRPHG 531
             +PVSIA LPQLYYERFGK LQA+GYLTESQRHG+ GYSLT LLARLKNTVTLIDRPHG
Sbjct: 212 RRAPVSIASLPQLYYERFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNTVTLIDRPHG 271

Query: 532 QHAVVLTED---FKA--EQHCFNSASGC----RQIYMTFPAESTFNEEDVSNYFSIYGPV 684
           QHAVVL ED   F A    H     SG     RQIY+TFPAESTF EEDV+ +F  YGPV
Sbjct: 272 QHAVVLAEDAHRFTAYRSDHRGEDLSGINPSSRQIYLTFPAESTFTEEDVTAHFRAYGPV 331

Query: 685 QDVRIPYQQKRMFGFVTYVFPETVKLILSKGNPHYVCGARVLVKPYKEK 831
           QDVRIPYQQKRMFGFVT+V+ ETVK ILS+GNPHY+CGARVLVKPY+EK
Sbjct: 332 QDVRIPYQQKRMFGFVTFVYSETVKAILSEGNPHYICGARVLVKPYREK 380


>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like [Vitis
            vinifera]
          Length = 572

 Score =  278 bits (712), Expect = 3e-72
 Identities = 183/462 (39%), Positives = 242/462 (52%), Gaps = 38/462 (8%)
 Frame = +1

Query: 7    PQQEEDQESAQSMN----LSRHQSLPSDLKFR---------DHQEQNYGS--SDEMYTFG 141
            PQ   DQ+    +          SLP D + +         D  E + GS  S   Y   
Sbjct: 113  PQVNGDQQQVHKLGDFVPQGYSDSLPDDFRLQSQIHFLAMEDQLENSVGSEFSGSYYYAE 172

Query: 142  NGHRRSYSMTDVSLAVSP-KPCIYFARGFCKHGNACRF--SHDVIRQVSVVEEDSTHQTX 312
                   S    SL   P K C YF +GFCKHGN+CR+   H ++   S +     ++  
Sbjct: 173  QALNTRISRRSPSLPEFPLKVCHYFNKGFCKHGNSCRYFHGHPMLESFSQIFSPGANELP 232

Query: 313  XXXXXXXXXXXXXXX------------SPVSIAFLPQLYYERFGKVLQADGYLTESQRHG 456
                                        PVSIA LP +YYE++G+ LQA+GYLTESQRHG
Sbjct: 233  NDDHVFPPGSLEKLELELTELLKSRRGCPVSIASLPMMYYEKYGRTLQAEGYLTESQRHG 292

Query: 457  RTGYSLTNLLARLKNTVTLIDRPHGQHAVVLTEDFKAEQHCFNSAS-------GCRQIYM 615
            + GYSLT LLARLKN++ LIDRPHGQH+V+L ED           S         +QIY+
Sbjct: 293  KAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDLPKYMEVNGERSDPGAIVGSSKQIYL 352

Query: 616  TFPAESTFNEEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTYVFPETVKLILSKGNPHYVC 795
            TFPA+STF E+DVSNYF+ +GPVQDVRIP QQKRMFGFVT+VF ETVK IL+KGNPHY+C
Sbjct: 353  TFPADSTFTEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGNPHYIC 412

Query: 796  GARVLVKPYKEK-TRKNVERAEQPRSVPFSFNVDAREYEFCSGPGLFQNSLLTSKQIDQQ 972
            GARVLVKPY+EK + + V+R + P  + +S +    + E  S P +  NS L  KQ   +
Sbjct: 413  GARVLVKPYREKASSRTVDRRQHP--MYYSPHFIDEDSELQSIPRVCDNSRLLRKQQLME 470

Query: 973  EQELAIEFERLCLTNIHSTQPSDQPNHTIPLQRSFTSNSVGKTHEAEEKEISSVLEDPNG 1152
            E E A+E ER  L+ +  T  +  P     +   F  +S      AE+ E  S       
Sbjct: 471  EHEQALELERRRLSELQLTPKTAHPYFGYSMD-EFKQHS--DAAHAEQAEFPS------- 520

Query: 1153 FTLQAEQFRYLLDVLDSEQNDITDQSQIPECQWSEILDTSET 1278
                AE+  YLL+VL++        +   E + S+ L+  E+
Sbjct: 521  ----AERLNYLLEVLNNGSTSEDRSTNYNEQESSQGLNLPES 558


>emb|CBI28414.3| unnamed protein product [Vitis vinifera]
          Length = 525

 Score =  278 bits (710), Expect = 6e-72
 Identities = 180/441 (40%), Positives = 236/441 (53%), Gaps = 25/441 (5%)
 Frame = +1

Query: 31   SAQSMNLSRHQSLPSDLKFRDHQEQNYGS--SDEMYTFGNGHRRSYSMTDVSLAVSP-KP 201
            S   +N S   S    L   D  E + GS  S   Y          S    SL   P K 
Sbjct: 87   SPPQVNPSPSMSQIHFLAMEDQLENSVGSEFSGSYYYAEQALNTRISRRSPSLPEFPLKV 146

Query: 202  CIYFARGFCKHGNACRF--SHDVIRQVSVVEEDSTHQTXXXXXXXXXXXXXXXX------ 357
            C YF +GFCKHGN+CR+   H ++   S +     ++                       
Sbjct: 147  CHYFNKGFCKHGNSCRYFHGHPMLESFSQIFSPGANELPNDDHVFPPGSLEKLELELTEL 206

Query: 358  ------SPVSIAFLPQLYYERFGKVLQADGYLTESQRHGRTGYSLTNLLARLKNTVTLID 519
                   PVSIA LP +YYE++G+ LQA+GYLTESQRHG+ GYSLT LLARLKN++ LID
Sbjct: 207  LKSRRGCPVSIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLID 266

Query: 520  RPHGQHAVVLTEDFKAEQHCFNSAS-------GCRQIYMTFPAESTFNEEDVSNYFSIYG 678
            RPHGQH+V+L ED           S         +QIY+TFPA+STF E+DVSNYF+ +G
Sbjct: 267  RPHGQHSVILAEDLPKYMEVNGERSDPGAIVGSSKQIYLTFPADSTFTEQDVSNYFNKFG 326

Query: 679  PVQDVRIPYQQKRMFGFVTYVFPETVKLILSKGNPHYVCGARVLVKPYKEK-TRKNVERA 855
            PVQDVRIP QQKRMFGFVT+VF ETVK IL+KGNPHY+CGARVLVKPY+EK + + V+R 
Sbjct: 327  PVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGNPHYICGARVLVKPYREKASSRTVDRR 386

Query: 856  EQPRSVPFSFNVDAREYEFCSGPGLFQNSLLTSKQIDQQEQELAIEFERLCLTNIHSTQP 1035
            + P  + +S +    + E  S P +  NS L  KQ   +E E A+E ER  L+ +  T  
Sbjct: 387  QHP--MYYSPHFIDEDSELQSIPRVCDNSRLLRKQQLMEEHEQALELERRRLSELQLTPK 444

Query: 1036 SDQPNHTIPLQRSFTSNSVGKTHEAEEKEISSVLEDPNGFTLQAEQFRYLLDVLDSEQND 1215
            +  P     +   F  +S      AE+ E  S           AE+  YLL+VL++    
Sbjct: 445  TAHPYFGYSMD-EFKQHS--DAAHAEQAEFPS-----------AERLNYLLEVLNNGSTS 490

Query: 1216 ITDQSQIPECQWSEILDTSET 1278
                +   E + S+ L+  E+
Sbjct: 491  EDRSTNYNEQESSQGLNLPES 511


>gb|EOX93474.1| CCCH-type zinc fingerfamily protein with RNA-binding domain, putative
            isoform 1 [Theobroma cacao] gi|508701579|gb|EOX93475.1|
            CCCH-type zinc fingerfamily protein with RNA-binding
            domain, putative isoform 1 [Theobroma cacao]
            gi|508701580|gb|EOX93476.1| CCCH-type zinc fingerfamily
            protein with RNA-binding domain, putative isoform 1
            [Theobroma cacao]
          Length = 545

 Score =  276 bits (705), Expect = 2e-71
 Identities = 170/379 (44%), Positives = 221/379 (58%), Gaps = 28/379 (7%)
 Frame = +1

Query: 151  RRSYSMTDVSLAVSPKPCIYFARGFCKHGNACRFSH-----------------DVIRQVS 279
            RRS S+ +  + +    C YF +GFCKHGN CR+ H                 DV     
Sbjct: 183  RRSPSLPEFPVKI----CHYFNKGFCKHGNNCRYFHGHPMPESLSQLFSRNSNDVGNDDH 238

Query: 280  VVEEDSTHQTXXXXXXXXXXXXXXXXSPVSIAFLPQLYYERFGKVLQADGYLTESQRHGR 459
            V+   +  +                  PVSIA LP LYYE +G+ LQA+GYLTESQRHG+
Sbjct: 239  VISPGTLEKLELELTELLKARRGL---PVSIASLPMLYYEMYGRTLQAEGYLTESQRHGK 295

Query: 460  TGYSLTNLLARLKNTVTLIDRPHGQHAVVLTEDFKAEQHCFNSAS-------GCRQIYMT 618
             GYSLT LLARLKN++ LIDRPHGQH+V+L ED           S       G RQIY+T
Sbjct: 296  AGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDAPKYLEYAGERSDPGGIVAGSRQIYLT 355

Query: 619  FPAESTFNEEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTYVFPETVKLILSKGNPHYVCG 798
            FPAESTF EEDVSNYF+ +GPVQDVRIP QQKRMFGFVT+V+ ETVK IL+KGNPH+VCG
Sbjct: 356  FPAESTFTEEDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVYAETVKQILAKGNPHFVCG 415

Query: 799  ARVLVKPYKEKT----RKNVERAEQPRSVPFSFNVDAREYEFCSGPGLFQNSLLTSKQID 966
            ARVLVKPY+EK+    RK  E+ +QP  + +S ++   + E  S P +  NS L  KQI 
Sbjct: 416  ARVLVKPYREKSRVVDRKFTEKVQQP--MYYSPHLIDGDTELQSMPRVCDNSRLLRKQI- 472

Query: 967  QQEQELAIEFERLCLTNIHSTQPSDQPNHTIPLQRSFTSNSVGKTHEAEEKEISSVLEDP 1146
             ++ E  +EFE+   + +         NH      S+   S+ +    +E+     +E P
Sbjct: 473  IEDNEQVLEFEKRRFSELQLAPKQHLTNH------SYFGYSMDELKHTDEQ-----VEFP 521

Query: 1147 NGFTLQAEQFRYLLDVLDS 1203
            +     AE++ YLLDVL++
Sbjct: 522  S-----AERYNYLLDVLNT 535


>ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like isoform
            X2 [Citrus sinensis]
          Length = 581

 Score =  275 bits (704), Expect = 3e-71
 Identities = 183/394 (46%), Positives = 228/394 (57%), Gaps = 30/394 (7%)
 Frame = +1

Query: 145  GHRRSYSMTDVSLAVSP-KPCIYFARGFCKHGNACRFSH-----DVIRQV------SVVE 288
            GH R+ S    SL   P K C YF +GFCKHGN CR+ H     +   Q+       +  
Sbjct: 176  GHVRT-SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRN 234

Query: 289  ED---STHQTXXXXXXXXXXXXXXXXSPVSIAFLPQLYYERFGKVLQADGYLTESQRHGR 459
            ED   S                     P+SIA LP +YYE++GK LQA+GYLTESQRHG+
Sbjct: 235  EDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGK 294

Query: 460  TGYSLTNLLARLKNTVTLIDR---PHGQHAVVLTEDFKAEQHCFNSAS-------GCRQI 609
             GYSLT LLARLKN++ LIDR   PHGQH+V+L ED           S       G RQI
Sbjct: 295  AGYSLTKLLARLKNSIRLIDRCNLPHGQHSVILAEDVPNYLEYSGEKSDPGGIVAGSRQI 354

Query: 610  YMTFPAESTFNEEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTYVFPETVKLILSKGNPHY 789
            Y+TFPAESTF E+DVSNYFS +GPVQDVRIP QQKRMFGFVT+VF ETVK IL+KGNPH+
Sbjct: 355  YLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHF 414

Query: 790  VCGARVLVKPYKEKT----RKNVERAEQPRSVPFSFNVDAREYEFCSGPGLFQNSLLTSK 957
            VCGARVLVKPY+EK+    RK VE+ + P      F     + E  + P +  NS L  K
Sbjct: 415  VCGARVLVKPYREKSRLVDRKYVEKMQHPLFCSLHFT--DGDTELHTMPRVCNNSRLLRK 472

Query: 958  QIDQQEQELAIEFERLCLTNIHSTQPSDQP-NHTIPLQRSFTSNSVGKTHEAEEKEISSV 1134
            Q+  +E E AIE ER  L+ +   Q + +P NH      S+   S+      +E ++S  
Sbjct: 473  QL-MEEHEQAIELERRRLSEM---QLACKPMNH-----HSYFGYSM------DELQVSEA 517

Query: 1135 LEDPNGFTLQAEQFRYLLDVLDSEQNDITDQSQI 1236
              +   F   AE+F YLLDVL+   N  T + Q+
Sbjct: 518  PAEQGDFP-SAERFNYLLDVLN---NGSTSEDQV 547


>ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like isoform
            X1 [Citrus sinensis]
          Length = 582

 Score =  275 bits (704), Expect = 3e-71
 Identities = 183/394 (46%), Positives = 228/394 (57%), Gaps = 30/394 (7%)
 Frame = +1

Query: 145  GHRRSYSMTDVSLAVSP-KPCIYFARGFCKHGNACRFSH-----DVIRQV------SVVE 288
            GH R+ S    SL   P K C YF +GFCKHGN CR+ H     +   Q+       +  
Sbjct: 176  GHVRT-SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRN 234

Query: 289  ED---STHQTXXXXXXXXXXXXXXXXSPVSIAFLPQLYYERFGKVLQADGYLTESQRHGR 459
            ED   S                     P+SIA LP +YYE++GK LQA+GYLTESQRHG+
Sbjct: 235  EDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGK 294

Query: 460  TGYSLTNLLARLKNTVTLIDR---PHGQHAVVLTEDFKAEQHCFNSAS-------GCRQI 609
             GYSLT LLARLKN++ LIDR   PHGQH+V+L ED           S       G RQI
Sbjct: 295  AGYSLTKLLARLKNSIRLIDRCNLPHGQHSVILAEDVPNYLEYSGEKSDPGGIVAGSRQI 354

Query: 610  YMTFPAESTFNEEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTYVFPETVKLILSKGNPHY 789
            Y+TFPAESTF E+DVSNYFS +GPVQDVRIP QQKRMFGFVT+VF ETVK IL+KGNPH+
Sbjct: 355  YLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHF 414

Query: 790  VCGARVLVKPYKEKT----RKNVERAEQPRSVPFSFNVDAREYEFCSGPGLFQNSLLTSK 957
            VCGARVLVKPY+EK+    RK VE+ + P      F     + E  + P +  NS L  K
Sbjct: 415  VCGARVLVKPYREKSRLVDRKYVEKMQHPLFCSLHFT--DGDTELHTMPRVCNNSRLLRK 472

Query: 958  QIDQQEQELAIEFERLCLTNIHSTQPSDQP-NHTIPLQRSFTSNSVGKTHEAEEKEISSV 1134
            Q+  +E E AIE ER  L+ +   Q + +P NH      S+   S+      +E ++S  
Sbjct: 473  QL-MEEHEQAIELERRRLSEM---QLACKPMNH-----HSYFGYSM------DELQVSEA 517

Query: 1135 LEDPNGFTLQAEQFRYLLDVLDSEQNDITDQSQI 1236
              +   F   AE+F YLLDVL+   N  T + Q+
Sbjct: 518  PAEQGDFP-SAERFNYLLDVLN---NGSTSEDQV 547


>gb|EMJ15058.1| hypothetical protein PRUPE_ppa019338mg [Prunus persica]
          Length = 564

 Score =  275 bits (704), Expect = 3e-71
 Identities = 169/376 (44%), Positives = 215/376 (57%), Gaps = 25/376 (6%)
 Frame = +1

Query: 151  RRSYSMTDVSLAVSPKPCIYFARGFCKHGNACRFSH--------------DVIRQVSVVE 288
            RR  S+T+  + +    C YF +GFCKHG++CR+ H              D I    V+ 
Sbjct: 174  RRFSSVTEFPVKI----CHYFNKGFCKHGSSCRYYHGQVIPESFSQMYGNDCINDDHVIS 229

Query: 289  EDSTHQTXXXXXXXXXXXXXXXXSPVSIAFLPQLYYERFGKVLQADGYLTESQRHGRTGY 468
              S  +                  P+SIA LP +YY++FGK LQA+GYLTESQRHG+ GY
Sbjct: 230  PGSLEKLEWEITELLRSRRGI---PISIASLPMMYYDKFGKSLQAEGYLTESQRHGKAGY 286

Query: 469  SLTNLLARLKNTVTLIDRPHGQHAVVLTEDFKAEQHCFNS-------ASGCRQIYMTFPA 627
            SLT LLARL +++ LIDRPHGQHAV+L ED        N         SG RQIY+TFPA
Sbjct: 287  SLTKLLARLGSSIRLIDRPHGQHAVILAEDSPKYADHRNEKGDPGPIVSGSRQIYLTFPA 346

Query: 628  ESTFNEEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTYVFPETVKLILSKGNPHYVCGARV 807
            ESTF+E+DVSNYFS +GPV+DVRIP QQKRMFGFVT+V  +TVK+IL+KGNPHYVCG+RV
Sbjct: 347  ESTFSEDDVSNYFSTFGPVEDVRIPCQQKRMFGFVTFVHADTVKMILAKGNPHYVCGSRV 406

Query: 808  LVKPYKEKTRKNVERAEQPRSVPFSF----NVDAREYEFCSGPGLFQNSLLTSKQIDQQE 975
            LVKPY+EK+ K V+R  Q R  P ++    + D     +    G   + LL  K +  +E
Sbjct: 407  LVKPYREKS-KLVDRKHQERMDPAAYLSQHHADMESDFYSMSVGCDNSRLLRKKLV--EE 463

Query: 976  QELAIEFERLCLTNIHSTQPSDQPNHTIPLQRSFTSNSVGKTHEAEEKEISSVLEDPNGF 1155
            QE AIE ER+ L  +H  +     NH                H +   +     ED   F
Sbjct: 464  QEYAIELERMRLAGLHFAR-KPVANH---------------PHSSYFMDGHKFSEDNFNF 507

Query: 1156 TLQAEQFRYLLDVLDS 1203
               AE F YL DVL+S
Sbjct: 508  P-SAECFNYLFDVLNS 522


>ref|XP_002320513.1| RNA recognition motif-containing family protein [Populus trichocarpa]
            gi|222861286|gb|EEE98828.1| RNA recognition
            motif-containing family protein [Populus trichocarpa]
          Length = 554

 Score =  273 bits (699), Expect = 1e-70
 Identities = 170/375 (45%), Positives = 219/375 (58%), Gaps = 24/375 (6%)
 Frame = +1

Query: 151  RRSYSMTDVSLAVSPKPCIYFARGFCKHGNACRFSH-----DVIRQVSVVEED------- 294
            RRS S+ +  + +    C YF +GFCKHGN CR+ H     +   Q+  +  +       
Sbjct: 159  RRSPSLPEFPVKI----CHYFNKGFCKHGNNCRYFHGHPMPESFSQILSLNSNEIANDEH 214

Query: 295  --STHQTXXXXXXXXXXXXXXXXSPVSIAFLPQLYYERFGKVLQADGYLTESQRHGRTGY 468
              S                     PVSIA LP +YYE++G++LQA+GYLTESQRHG+ GY
Sbjct: 215  FISPGSLEKLELELTELLKSRRGVPVSIASLPMMYYEKYGRMLQAEGYLTESQRHGKAGY 274

Query: 469  SLTNLLARLKNTVTLIDRPHGQHAVVLTED------FKAEQHCFNS-ASGCRQIYMTFPA 627
            SLT LLARLKN++ LIDRPHGQH+V+LTED      +  E++      +G RQIY+TFPA
Sbjct: 275  SLTKLLARLKNSIRLIDRPHGQHSVILTEDVPKYLEYAGERNDPGGIVAGSRQIYLTFPA 334

Query: 628  ESTFNEEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTYVFPETVKLILSKGNPHYVCGARV 807
            ESTF E+DVSNYFS +GPVQDVRIP QQKRMFGFVT+VF ETVK ILSKGNPH+VCGARV
Sbjct: 335  ESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILSKGNPHHVCGARV 394

Query: 808  LVKPYKEKTRKNVERAEQPRSVPFSFN---VDAREYEFCSGPGLFQNSLLTSKQIDQQEQ 978
            LVKPY+EK+R    +  +    PF ++   +D  + E  S P +  NS L  KQ+  +E 
Sbjct: 395  LVKPYREKSRLVDRKYAEKIQHPFFYSQHFIDG-DSELHSVPRVCDNSRLLRKQL-MEEH 452

Query: 979  ELAIEFERLCLTNIHSTQPSDQPNHTIPLQRSFTSNSVGKTHEAEEKEISSVLEDPNGFT 1158
            E A+E ER  L+      P     H                H  +E ++S   E  + F 
Sbjct: 453  EQALELERRRLSEF-QLAPKPLARHAY------------HGHSMDEFKLSE--EQADQFP 497

Query: 1159 LQAEQFRYLLDVLDS 1203
              AE F Y  DVL++
Sbjct: 498  -SAEHFNYWFDVLNN 511


>ref|XP_001758251.1| predicted protein [Physcomitrella patens]
           gi|162690707|gb|EDQ77073.1| predicted protein
           [Physcomitrella patens]
          Length = 421

 Score =  273 bits (699), Expect = 1e-70
 Identities = 145/239 (60%), Positives = 168/239 (70%), Gaps = 14/239 (5%)
 Frame = +1

Query: 157 SYSMTDVSLAVSPKPCIYFARGFCKHGNACRF-----SHDVIRQVSVVEEDSTHQTXXXX 321
           S S  D+   ++ KPC+YFARG+CKHG++CR       H  +R    V++     +    
Sbjct: 181 SSSPPDLGPTLAWKPCLYFARGYCKHGSSCRSPASSNGHRELR----VDDGMAPGSLERL 236

Query: 322 XXXXXXXXXXXXSPVSIAFLPQLYYERFGKVLQADGYLTESQRHGRTGYSLTNLLARLKN 501
                       +PVSIA LPQLYYERFGK LQA+GYLTESQRHG+ GYSLT LLARLKN
Sbjct: 237 EIELQELLRGRRAPVSIASLPQLYYERFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKN 296

Query: 502 TVTLIDRPHGQHAVVLTED-----FKAEQHCFNSASGC----RQIYMTFPAESTFNEEDV 654
           TVTLIDRPHGQHAVVL ED          H     SG     RQIY+TFPAESTF EEDV
Sbjct: 297 TVTLIDRPHGQHAVVLAEDAHRFTVHRSDHRGEDLSGINPSSRQIYLTFPAESTFCEEDV 356

Query: 655 SNYFSIYGPVQDVRIPYQQKRMFGFVTYVFPETVKLILSKGNPHYVCGARVLVKPYKEK 831
           +++F  YGPVQDVRIPYQQKRMFGFVT+V+ ETVK ILS+GNPHY+CGARVLVKPY+EK
Sbjct: 357 TSHFRAYGPVQDVRIPYQQKRMFGFVTFVYSETVKAILSEGNPHYICGARVLVKPYREK 415


>gb|EOY12131.1| RNA binding protein, putative isoform 3, partial [Theobroma cacao]
          Length = 507

 Score =  273 bits (697), Expect = 2e-70
 Identities = 166/359 (46%), Positives = 208/359 (57%), Gaps = 21/359 (5%)
 Frame = +1

Query: 25   QESAQSMNLSRHQSLPSDLKFRDHQEQNYGSSDEMYTFGNGHRRSYSMTDVSLAVSPKPC 204
            +E  +S+NL  +    +D  + D    N G   E        RR  ++ D  +    K C
Sbjct: 148  EEQIESLNLG-NGGFSNDYCYSDAVLGNLGVRTE--------RRHQNLPDFPV----KTC 194

Query: 205  IYFARGFCKHGNACRFSHDVI----------RQVSVVEEDSTHQTXXXXXXXXXXXXXXX 354
             YF +G+CKHG+ CR+ H  +            +  V ED                    
Sbjct: 195  HYFNKGYCKHGSNCRYFHGQVSDNFPHMFGNNSMDAVNEDPFISLENLELEIVELLKSRR 254

Query: 355  XSPVSIAFLPQLYYERFGKVLQADGYLTESQRHGRTGYSLTNLLARLKNTVTLIDRPHGQ 534
              PVSIA LP LYYE++GKVLQADGYLTESQRHG+ GYSLT LLARLKN++ +IDRPHGQ
Sbjct: 255  GEPVSIASLPLLYYEKYGKVLQADGYLTESQRHGKAGYSLTKLLARLKNSIRVIDRPHGQ 314

Query: 535  HAVVLTEDFKAEQHCFNS-------ASGCRQIYMTFPAESTFNEEDVSNYFSIYGPVQDV 693
            H+V+L ED        N         SG RQIY+TFPAESTF E+DVSNYFS YG V+DV
Sbjct: 315  HSVILAEDAPKYMENRNDRSDPGPIVSGSRQIYLTFPAESTFTEDDVSNYFSNYGQVEDV 374

Query: 694  RIPYQQKRMFGFVTYVFPETVKLILSKGNPHYVCGARVLVKPYKEKT----RKNVERAEQ 861
            RIP QQKRMFGFVT+V  +TVK+IL+KGNPHYVCGARVLVKPY+EK+    RK  +R E 
Sbjct: 375  RIPCQQKRMFGFVTFVSADTVKMILAKGNPHYVCGARVLVKPYREKSKLVDRKYQDRIES 434

Query: 862  PRSVPFSFNVDAREYEFCSGPGLFQNSLLTSKQIDQQEQELAIEFERLCLTNIHSTQPS 1038
            P  + +S +    E E  S P  +  S L  KQ  +  +++  E ER     +H TQ S
Sbjct: 435  P--MYYSPHYIDMEPELHSIPRGYAMSRLFRKQFIEDPEQI-FELERRRPLEMHMTQKS 490


>gb|EOY12129.1| RNA binding protein, putative isoform 1 [Theobroma cacao]
          Length = 568

 Score =  273 bits (697), Expect = 2e-70
 Identities = 166/359 (46%), Positives = 208/359 (57%), Gaps = 21/359 (5%)
 Frame = +1

Query: 25   QESAQSMNLSRHQSLPSDLKFRDHQEQNYGSSDEMYTFGNGHRRSYSMTDVSLAVSPKPC 204
            +E  +S+NL  +    +D  + D    N G   E        RR  ++ D  +    K C
Sbjct: 148  EEQIESLNLG-NGGFSNDYCYSDAVLGNLGVRTE--------RRHQNLPDFPV----KTC 194

Query: 205  IYFARGFCKHGNACRFSHDVI----------RQVSVVEEDSTHQTXXXXXXXXXXXXXXX 354
             YF +G+CKHG+ CR+ H  +            +  V ED                    
Sbjct: 195  HYFNKGYCKHGSNCRYFHGQVSDNFPHMFGNNSMDAVNEDPFISLENLELEIVELLKSRR 254

Query: 355  XSPVSIAFLPQLYYERFGKVLQADGYLTESQRHGRTGYSLTNLLARLKNTVTLIDRPHGQ 534
              PVSIA LP LYYE++GKVLQADGYLTESQRHG+ GYSLT LLARLKN++ +IDRPHGQ
Sbjct: 255  GEPVSIASLPLLYYEKYGKVLQADGYLTESQRHGKAGYSLTKLLARLKNSIRVIDRPHGQ 314

Query: 535  HAVVLTEDFKAEQHCFNS-------ASGCRQIYMTFPAESTFNEEDVSNYFSIYGPVQDV 693
            H+V+L ED        N         SG RQIY+TFPAESTF E+DVSNYFS YG V+DV
Sbjct: 315  HSVILAEDAPKYMENRNDRSDPGPIVSGSRQIYLTFPAESTFTEDDVSNYFSNYGQVEDV 374

Query: 694  RIPYQQKRMFGFVTYVFPETVKLILSKGNPHYVCGARVLVKPYKEKT----RKNVERAEQ 861
            RIP QQKRMFGFVT+V  +TVK+IL+KGNPHYVCGARVLVKPY+EK+    RK  +R E 
Sbjct: 375  RIPCQQKRMFGFVTFVSADTVKMILAKGNPHYVCGARVLVKPYREKSKLVDRKYQDRIES 434

Query: 862  PRSVPFSFNVDAREYEFCSGPGLFQNSLLTSKQIDQQEQELAIEFERLCLTNIHSTQPS 1038
            P  + +S +    E E  S P  +  S L  KQ  +  +++  E ER     +H TQ S
Sbjct: 435  P--MYYSPHYIDMEPELHSIPRGYAMSRLFRKQFIEDPEQI-FELERRRPLEMHMTQKS 490


>gb|EOY12130.1| RNA binding protein, putative isoform 2 [Theobroma cacao]
          Length = 569

 Score =  272 bits (696), Expect = 2e-70
 Identities = 166/360 (46%), Positives = 208/360 (57%), Gaps = 22/360 (6%)
 Frame = +1

Query: 25   QESAQSMNLSRHQSLPSDLKFRDHQEQNYGSSDEMYTFGNGHRRSYSMTDVSLAVSPKPC 204
            +E  +S+NL  +    +D  + D    N G   E        RR  ++ D  +    K C
Sbjct: 148  EEQIESLNLG-NGGFSNDYCYSDAVLGNLGVRTE--------RRHQNLPDFPV----KTC 194

Query: 205  IYFARGFCKHGNACRFSHDVI----------RQVSVVEEDSTHQTXXXXXXXXXXXXXXX 354
             YF +G+CKHG+ CR+ H  +            +  V ED                    
Sbjct: 195  HYFNKGYCKHGSNCRYFHGQVSDNFPHMFGNNSMDAVNEDPFISLENLELEIVELLKSRR 254

Query: 355  XSPVSIAFLPQLYYERFGKVLQADGYLTESQRHGRTGYSLTNLLARLKNTVTLIDRPHGQ 534
              PVSIA LP LYYE++GKVLQADGYLTESQRHG+ GYSLT LLARLKN++ +IDRPHGQ
Sbjct: 255  GEPVSIASLPLLYYEKYGKVLQADGYLTESQRHGKAGYSLTKLLARLKNSIRVIDRPHGQ 314

Query: 535  HAVVLTEDFKAEQHCFNS-------ASGCRQIYMTFPAESTFNEEDVSNYFSIYGPVQDV 693
            H+V+L ED        N         SG RQIY+TFPAESTF E+DVSNYFS YG V+DV
Sbjct: 315  HSVILAEDAPKYMENRNDRSDPGPIVSGSRQIYLTFPAESTFTEDDVSNYFSNYGQVEDV 374

Query: 694  RIPYQQKRMFGFVTYVFPETVKLILSKGNPHYVCGARVLVKPYKEK-----TRKNVERAE 858
            RIP QQKRMFGFVT+V  +TVK+IL+KGNPHYVCGARVLVKPY+EK     +RK  +R E
Sbjct: 375  RIPCQQKRMFGFVTFVSADTVKMILAKGNPHYVCGARVLVKPYREKSKLVDSRKYQDRIE 434

Query: 859  QPRSVPFSFNVDAREYEFCSGPGLFQNSLLTSKQIDQQEQELAIEFERLCLTNIHSTQPS 1038
             P  + +S +    E E  S P  +  S L  KQ  +  +++  E ER     +H TQ S
Sbjct: 435  SP--MYYSPHYIDMEPELHSIPRGYAMSRLFRKQFIEDPEQI-FELERRRPLEMHMTQKS 491


>gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus persica]
          Length = 565

 Score =  272 bits (695), Expect = 3e-70
 Identities = 170/377 (45%), Positives = 225/377 (59%), Gaps = 26/377 (6%)
 Frame = +1

Query: 151  RRSYSMTDVSLAVSPKPCIYFARGFCKHGNACR----------FSHDVIRQVS----VVE 288
            RRS S+ +  L V    C YF +GFCKHG+ CR          FSH  + ++S    VV 
Sbjct: 171  RRSPSLPEFPLKV----CHYFNKGFCKHGSNCRYFHGHPMAESFSHPNLNELSNDDHVVS 226

Query: 289  EDSTHQTXXXXXXXXXXXXXXXXSPVSIAFLPQLYYERFGKVLQADGYLTESQRHGRTGY 468
              S  +                  P+SIA LP +YYE++G+ LQA+GYLTESQRHG+ GY
Sbjct: 227  PGSLEKLEIEIIELLKSRRGF---PISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGY 283

Query: 469  SLTNLLARLKNTVTLIDRPHGQHAVVLTEDF-KAEQHCFNSA------SGCRQIYMTFPA 627
            SLT LLARLKN++ L+DRPHGQH+V+L ED  K  ++           +G RQIY+TFPA
Sbjct: 284  SLTKLLARLKNSIRLLDRPHGQHSVILAEDIPKYLEYAGEKTEPGGIIAGSRQIYLTFPA 343

Query: 628  ESTFNEEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTYVFPETVKLILSKGNPHYVCGARV 807
            ES F E+DVSNYF+ YGPVQDVRIP QQKRMFGFVT+V+ ETV+ ILSKGNPH+VCGARV
Sbjct: 344  ESNFTEQDVSNYFNKYGPVQDVRIPCQQKRMFGFVTFVYAETVRHILSKGNPHFVCGARV 403

Query: 808  LVKPYKEKTRKNVERAEQPRSVPFSFN---VDAREYEFCSGPGLFQNSLLTSKQIDQQEQ 978
            LVKPY+EK+R    +  +       +N   +DA + EF S P + +N+    KQ   +E 
Sbjct: 404  LVKPYREKSRLVDRKFSEKMQHAMCYNSHFIDA-DSEFHSMPRVCENARFLRKQF-MEEN 461

Query: 979  ELAIEFERLCLTNIH-STQP-SDQPNHTIPLQRSFTSNSVGKTHEAEEKEISSVLEDPNG 1152
            E A+E ER  L+ +H + +P S    +  P+       +      AE+ E+ S       
Sbjct: 462  EQALELERRRLSEMHLAAKPLSHHFYYGYPMDEFKHPEA-----HAEQAEVPS------- 509

Query: 1153 FTLQAEQFRYLLDVLDS 1203
                A++F YLLDVL++
Sbjct: 510  ----AKEFTYLLDVLNN 522


>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
            gi|223525472|gb|EEF28048.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 578

 Score =  272 bits (695), Expect = 3e-70
 Identities = 174/380 (45%), Positives = 218/380 (57%), Gaps = 28/380 (7%)
 Frame = +1

Query: 148  HRRSYSMTDVSLAVSPKPCIYFARGFCKHGNACRFSH-----------------DVIRQV 276
            +RRS S+ +  L +    C YF++G+CKHGN CR+ H                 D     
Sbjct: 184  NRRSPSLPEFPLKI----CHYFSKGYCKHGNNCRYVHGHPMPEGFSQIFSTKSNDFSNDE 239

Query: 277  SVVEEDSTHQTXXXXXXXXXXXXXXXXSPVSIAFLPQLYYERFGKVLQADGYLTESQRHG 456
             VV   S  +                  PVSIA LP +YYE++GK LQA+GYLTESQRHG
Sbjct: 240  HVVSPGSLEKLEMELAELLKSRRGM---PVSIASLPMMYYEKYGKTLQAEGYLTESQRHG 296

Query: 457  RTGYSLTNLLARLKNTVTLIDRPHGQHAVVLTEDFKAEQHCFNS-------ASGCRQIYM 615
            + GYSLT LLARLKN++ +IDRPHGQH+V+L ED                  +G RQIY+
Sbjct: 297  KAGYSLTKLLARLKNSIRVIDRPHGQHSVILEEDVPKYLEYVGERNDPGGIVAGSRQIYL 356

Query: 616  TFPAESTFNEEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTYVFPETVKLILSKGNPHYVC 795
            TFPAES F E DVS YFS +GPVQDVRIP QQKRMFGFVT++F ETVK IL+KGNPHYVC
Sbjct: 357  TFPAESIFTEHDVSIYFSKFGPVQDVRIPCQQKRMFGFVTFIFVETVKQILAKGNPHYVC 416

Query: 796  GARVLVKPYKEKT----RKNVERAEQPRSVPFSFNVDAREYEFCSGPGLFQNSLLTSKQI 963
            GARVLVKPY+EK+    RK  E+ + P      F +D  + E    P +  NS L  KQ+
Sbjct: 417  GARVLVKPYREKSRLIDRKFSEKLQHPMYNSSHF-IDG-DSELHPMPTISDNSRLLRKQL 474

Query: 964  DQQEQELAIEFERLCLTNIHSTQPSDQPNHTIPLQRSFTSNSVGKTHEAEEKEISSVLED 1143
              +E E A+EFER  L   H    S   NH     +S+   S+ +   +EE       E 
Sbjct: 475  -MEENEHALEFERRRLLEFHLGPKS--LNH-----QSYLGCSMDELKLSEEH-----AEF 521

Query: 1144 PNGFTLQAEQFRYLLDVLDS 1203
            P+     AE+F YLLDVL++
Sbjct: 522  PS-----AERFNYLLDVLNN 536


>ref|XP_006452534.1| hypothetical protein CICLE_v10007876mg [Citrus clementina]
            gi|567921060|ref|XP_006452536.1| hypothetical protein
            CICLE_v10007876mg [Citrus clementina]
            gi|567921062|ref|XP_006452537.1| hypothetical protein
            CICLE_v10007876mg [Citrus clementina]
            gi|557555760|gb|ESR65774.1| hypothetical protein
            CICLE_v10007876mg [Citrus clementina]
            gi|557555762|gb|ESR65776.1| hypothetical protein
            CICLE_v10007876mg [Citrus clementina]
            gi|557555763|gb|ESR65777.1| hypothetical protein
            CICLE_v10007876mg [Citrus clementina]
          Length = 547

 Score =  270 bits (689), Expect = 2e-69
 Identities = 169/363 (46%), Positives = 205/363 (56%), Gaps = 36/363 (9%)
 Frame = +1

Query: 40   SMNLSRHQSLPSDLKFRDHQEQ----NYGSSDEMY-------TFGNGHRRSYSMTDVSLA 186
            S +++  QS    L   D  E     N G S + Y         G    R Y   +  L 
Sbjct: 123  SDSINELQSQTQFLSLEDQMEHVNLGNTGFSSDCYYSDAALSNLGARAGRRYQSLNAELP 182

Query: 187  VSPKPCIYFARGFCKHGNACRFSHDVIR--------QVSVVEEDSTH-----QTXXXXXX 327
            V  K C YF +GFCKHG+ CR+ H ++         Q S    +  H             
Sbjct: 183  V--KTCHYFNKGFCKHGSNCRYYHGLVSESFTQMFGQTSPDGFNDDHLFSPGSLEKLELE 240

Query: 328  XXXXXXXXXXSPVSIAFLPQLYYERFGKVLQADGYLTESQRHGRTGYSLTNLLARLKNTV 507
                      +P+SIA LP LYYE++GKVLQA GYLTESQRHG+ GYSLT LLARLKN+V
Sbjct: 241  IIELLKARRGNPISIASLPMLYYEKYGKVLQAGGYLTESQRHGKAGYSLTKLLARLKNSV 300

Query: 508  TLIDRPHGQHAVVLTEDFKAEQHCFNSAS-------GCRQIYMTFPAESTFNEEDVSNYF 666
             LIDRPHGQHAV+L ED        N  S       G RQIY+TFPAESTF E+DVSNYF
Sbjct: 301  RLIDRPHGQHAVILAEDAPKYLENRNERSDPGPIVTGSRQIYLTFPAESTFTEDDVSNYF 360

Query: 667  SIYGPVQDVRIPYQQKRMFGFVTYVFPETVKLILSKGNPHYVCGARVLVKPYKEKT---- 834
            + YGPV DVRIP QQKRMFGFVT+   +TVK+IL+KGNPH+VCGARVLVKPY+EK+    
Sbjct: 361  NTYGPVDDVRIPCQQKRMFGFVTFASADTVKMILAKGNPHFVCGARVLVKPYREKSKLVD 420

Query: 835  RKNVERAEQPRSV-PFSFNVDAREYEFCSGPGLFQNSLLTSKQIDQQEQELAIEFERLCL 1011
            RK  ER E P    P   ++D+  + F  G    + S    KQ+  +EQE A E ER  L
Sbjct: 421  RKYQERMESPMYFSPQYVDMDSDLHSFSRG---CETSRFIRKQL-LEEQEQAFELERRRL 476

Query: 1012 TNI 1020
              +
Sbjct: 477  AEL 479


>ref|XP_006452532.1| hypothetical protein CICLE_v10007876mg [Citrus clementina]
            gi|567921054|ref|XP_006452533.1| hypothetical protein
            CICLE_v10007876mg [Citrus clementina]
            gi|567921058|ref|XP_006452535.1| hypothetical protein
            CICLE_v10007876mg [Citrus clementina]
            gi|568841990|ref|XP_006474936.1| PREDICTED: zinc finger
            CCCH domain-containing protein 18-like isoform X1 [Citrus
            sinensis] gi|568841992|ref|XP_006474937.1| PREDICTED:
            zinc finger CCCH domain-containing protein 18-like
            isoform X2 [Citrus sinensis] gi|557555758|gb|ESR65772.1|
            hypothetical protein CICLE_v10007876mg [Citrus
            clementina] gi|557555759|gb|ESR65773.1| hypothetical
            protein CICLE_v10007876mg [Citrus clementina]
            gi|557555761|gb|ESR65775.1| hypothetical protein
            CICLE_v10007876mg [Citrus clementina]
          Length = 565

 Score =  270 bits (689), Expect = 2e-69
 Identities = 169/363 (46%), Positives = 205/363 (56%), Gaps = 36/363 (9%)
 Frame = +1

Query: 40   SMNLSRHQSLPSDLKFRDHQEQ----NYGSSDEMY-------TFGNGHRRSYSMTDVSLA 186
            S +++  QS    L   D  E     N G S + Y         G    R Y   +  L 
Sbjct: 123  SDSINELQSQTQFLSLEDQMEHVNLGNTGFSSDCYYSDAALSNLGARAGRRYQSLNAELP 182

Query: 187  VSPKPCIYFARGFCKHGNACRFSHDVIR--------QVSVVEEDSTH-----QTXXXXXX 327
            V  K C YF +GFCKHG+ CR+ H ++         Q S    +  H             
Sbjct: 183  V--KTCHYFNKGFCKHGSNCRYYHGLVSESFTQMFGQTSPDGFNDDHLFSPGSLEKLELE 240

Query: 328  XXXXXXXXXXSPVSIAFLPQLYYERFGKVLQADGYLTESQRHGRTGYSLTNLLARLKNTV 507
                      +P+SIA LP LYYE++GKVLQA GYLTESQRHG+ GYSLT LLARLKN+V
Sbjct: 241  IIELLKARRGNPISIASLPMLYYEKYGKVLQAGGYLTESQRHGKAGYSLTKLLARLKNSV 300

Query: 508  TLIDRPHGQHAVVLTEDFKAEQHCFNSAS-------GCRQIYMTFPAESTFNEEDVSNYF 666
             LIDRPHGQHAV+L ED        N  S       G RQIY+TFPAESTF E+DVSNYF
Sbjct: 301  RLIDRPHGQHAVILAEDAPKYLENRNERSDPGPIVTGSRQIYLTFPAESTFTEDDVSNYF 360

Query: 667  SIYGPVQDVRIPYQQKRMFGFVTYVFPETVKLILSKGNPHYVCGARVLVKPYKEKT---- 834
            + YGPV DVRIP QQKRMFGFVT+   +TVK+IL+KGNPH+VCGARVLVKPY+EK+    
Sbjct: 361  NTYGPVDDVRIPCQQKRMFGFVTFASADTVKMILAKGNPHFVCGARVLVKPYREKSKLVD 420

Query: 835  RKNVERAEQPRSV-PFSFNVDAREYEFCSGPGLFQNSLLTSKQIDQQEQELAIEFERLCL 1011
            RK  ER E P    P   ++D+  + F  G    + S    KQ+  +EQE A E ER  L
Sbjct: 421  RKYQERMESPMYFSPQYVDMDSDLHSFSRG---CETSRFIRKQL-LEEQEQAFELERRRL 476

Query: 1012 TNI 1020
              +
Sbjct: 477  AEL 479


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