BLASTX nr result

ID: Ephedra27_contig00011458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00011458
         (443 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEW09141.1| hypothetical protein CL4262Contig1_02, partial [P...    57   2e-06
ref|XP_001764980.1| predicted protein [Physcomitrella patens] gi...    57   3e-06
ref|XP_001757287.1| histone H1 linker [Physcomitrella patens] gi...    57   3e-06

>gb|AEW09141.1| hypothetical protein CL4262Contig1_02, partial [Pinus radiata]
           gi|383162902|gb|AFG64152.1| hypothetical protein
           CL4262Contig1_02, partial [Pinus taeda]
           gi|383162904|gb|AFG64153.1| hypothetical protein
           CL4262Contig1_02, partial [Pinus taeda]
           gi|383162906|gb|AFG64154.1| hypothetical protein
           CL4262Contig1_02, partial [Pinus taeda]
           gi|383162908|gb|AFG64155.1| hypothetical protein
           CL4262Contig1_02, partial [Pinus taeda]
           gi|383162910|gb|AFG64156.1| hypothetical protein
           CL4262Contig1_02, partial [Pinus taeda]
           gi|383162912|gb|AFG64157.1| hypothetical protein
           CL4262Contig1_02, partial [Pinus taeda]
           gi|383162914|gb|AFG64158.1| hypothetical protein
           CL4262Contig1_02, partial [Pinus taeda]
           gi|383162916|gb|AFG64159.1| hypothetical protein
           CL4262Contig1_02, partial [Pinus taeda]
           gi|383162918|gb|AFG64160.1| hypothetical protein
           CL4262Contig1_02, partial [Pinus taeda]
           gi|383162920|gb|AFG64161.1| hypothetical protein
           CL4262Contig1_02, partial [Pinus taeda]
           gi|383162922|gb|AFG64162.1| hypothetical protein
           CL4262Contig1_02, partial [Pinus taeda]
           gi|383162924|gb|AFG64163.1| hypothetical protein
           CL4262Contig1_02, partial [Pinus taeda]
           gi|383162926|gb|AFG64164.1| hypothetical protein
           CL4262Contig1_02, partial [Pinus taeda]
           gi|383162928|gb|AFG64165.1| hypothetical protein
           CL4262Contig1_02, partial [Pinus taeda]
           gi|383162930|gb|AFG64166.1| hypothetical protein
           CL4262Contig1_02, partial [Pinus taeda]
           gi|383162932|gb|AFG64167.1| hypothetical protein
           CL4262Contig1_02, partial [Pinus taeda]
          Length = 82

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/47 (59%), Positives = 34/47 (72%)
 Frame = +2

Query: 2   IEKAVGEKYKTHLPSNFGKRILFFLRKYTKEGKLVKVKGSFKLSDEL 142
           I K +G KYK  LP N+ K +L  LR+ +K GKL KVKGS+KLSDEL
Sbjct: 11  IAKFIGAKYKAVLPGNYEKLLLVQLRRLSKSGKLTKVKGSYKLSDEL 57


>ref|XP_001764980.1| predicted protein [Physcomitrella patens]
           gi|162683789|gb|EDQ70196.1| predicted protein
           [Physcomitrella patens]
          Length = 292

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/47 (61%), Positives = 33/47 (70%)
 Frame = +2

Query: 2   IEKAVGEKYKTHLPSNFGKRILFFLRKYTKEGKLVKVKGSFKLSDEL 142
           I K + +KYKT LP NF K +   LR  TK GKLVKVK SFKLSDE+
Sbjct: 85  IAKYLEDKYKTGLPPNFKKTLTIQLRNLTKSGKLVKVKNSFKLSDEI 131


>ref|XP_001757287.1| histone H1 linker [Physcomitrella patens]
           gi|162691410|gb|EDQ77772.1| histone H1 linker
           [Physcomitrella patens]
          Length = 285

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/47 (63%), Positives = 33/47 (70%)
 Frame = +2

Query: 2   IEKAVGEKYKTHLPSNFGKRILFFLRKYTKEGKLVKVKGSFKLSDEL 142
           I K + +KYKT LP NF K +   LR  TK GKLVKVK SFKLSDEL
Sbjct: 100 IAKYLEDKYKTGLPPNFKKMLTTQLRNLTKAGKLVKVKNSFKLSDEL 146


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