BLASTX nr result
ID: Ephedra27_contig00011417
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra27_contig00011417
(1444 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002977444.1| hypothetical protein SELMODRAFT_417492 [Sela... 85 3e-14
ref|XP_002975204.1| hypothetical protein SELMODRAFT_442740 [Sela... 85 9e-14
ref|XP_001770889.1| predicted protein [Physcomitrella patens] gi... 82 4e-13
ref|XP_002524216.1| zinc finger protein, putative [Ricinus commu... 70 2e-09
ref|XP_006435620.1| hypothetical protein CICLE_v10031537mg [Citr... 70 3e-09
ref|XP_006486408.1| PREDICTED: poly(A) RNA polymerase GLD2-like ... 69 6e-09
ref|XP_006846360.1| hypothetical protein AMTR_s00012p00261420 [A... 69 6e-09
gb|ESW35455.1| hypothetical protein PHAVU_001G236100g [Phaseolus... 67 2e-08
ref|XP_002879814.1| hypothetical protein ARALYDRAFT_321659 [Arab... 67 2e-08
ref|XP_006296116.1| hypothetical protein CARUB_v10025267mg [Caps... 65 7e-08
ref|XP_004307468.1| PREDICTED: poly(A) RNA polymerase GLD2-like ... 65 7e-08
dbj|BAE99845.1| hypothetical protein [Arabidopsis thaliana] 65 7e-08
ref|NP_181504.2| HEN1 suppressor 1 [Arabidopsis thaliana] gi|538... 65 7e-08
ref|XP_006601987.1| PREDICTED: poly(A) RNA polymerase cid11-like... 63 3e-07
ref|XP_004503175.1| PREDICTED: poly(A) RNA polymerase GLD2-like ... 63 3e-07
ref|XP_006601982.1| PREDICTED: poly(A) RNA polymerase cid11-like... 63 3e-07
ref|XP_006591354.1| PREDICTED: poly(A) RNA polymerase cid11-like... 63 4e-07
ref|XP_006411208.1| hypothetical protein EUTSA_v10016564mg [Eutr... 62 5e-07
ref|XP_004307469.1| PREDICTED: poly(A) RNA polymerase, mitochond... 62 5e-07
ref|NP_001062505.1| Os08g0559900 [Oryza sativa Japonica Group] g... 62 6e-07
>ref|XP_002977444.1| hypothetical protein SELMODRAFT_417492 [Selaginella moellendorffii]
gi|300154814|gb|EFJ21448.1| hypothetical protein
SELMODRAFT_417492 [Selaginella moellendorffii]
Length = 479
Score = 85.1 bits (209), Expect(2) = 3e-14
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 20/166 (12%)
Frame = +1
Query: 46 KVRELISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKW---VHIEHTQI 216
++ E +G+ N SSV ELFVSFF Q++ E+W QGLA+C F G+W + +
Sbjct: 227 RIAEFTERGFGKGNTSSVAELFVSFFGQFSAVEELWIQGLAVCTFRGQWGDKTTTDPSWA 286
Query: 217 HKNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETLQKPPGSISIDSLRNFLF-- 390
KNY+M++ DP D ENCAR+V +L+ + A R + E L + L+ LF
Sbjct: 287 SKNYAMLVEDPFDLSENCARSVHQGSLQHVCKAFRLSHELLCDKFSYWFLGKLKETLFRW 346
Query: 391 --------------GCSQSREGQRTNQA-SSKKPQRYQNKKNHVEE 483
G Q RE N + + +P++ + K V +
Sbjct: 347 PHASPRPCFHPSRPGIEQLREHASLNASRKNDRPEKQKKGKKQVRQ 392
Score = 21.6 bits (44), Expect(2) = 3e-14
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 519 SSGNTW*Q*SKQTKLYP 569
SS W + K+TKLYP
Sbjct: 415 SSEEVWIRKQKRTKLYP 431
>ref|XP_002975204.1| hypothetical protein SELMODRAFT_442740 [Selaginella moellendorffii]
gi|300157363|gb|EFJ23989.1| hypothetical protein
SELMODRAFT_442740 [Selaginella moellendorffii]
Length = 373
Score = 84.7 bits (208), Expect = 9e-14
Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 20/170 (11%)
Frame = +1
Query: 34 HCTIKVRELISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKW---VHIE 204
H ++ E +G+ N SSV ELFVSFF Q++ E+W QGLA+C F G+W +
Sbjct: 204 HYLNRIAEFTERGFGKGNTSSVAELFVSFFGQFSAVEELWIQGLAVCTFRGQWGDKTTTD 263
Query: 205 HTQIHKNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETLQKPPGSISIDSLRNF 384
KNY++++ DP D ENC+R+V +L+ + A R T E L + L+
Sbjct: 264 PAWASKNYALLVEDPFDLSENCSRSVHQGSLQHVCKAFRLTHELLCDKFSYWFLGKLKET 323
Query: 385 LF----------------GCSQSREGQRTNQA-SSKKPQRYQNKKNHVEE 483
LF G Q RE N + + +P++ + K V++
Sbjct: 324 LFRWPHASPRPCFHPSRPGIEQLREHVSLNASRKNDRPEKQKKGKKQVKQ 373
>ref|XP_001770889.1| predicted protein [Physcomitrella patens] gi|162677753|gb|EDQ64219.1|
predicted protein [Physcomitrella patens]
Length = 1171
Score = 82.4 bits (202), Expect = 4e-13
Identities = 41/124 (33%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Frame = +1
Query: 28 LHHCTIKVRELISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEH 207
+ C +++ L+S+ +G+ N+ S+ +LF+SFF Q+A +W GLA+ F G+W
Sbjct: 665 MQECYGRIQALVSEGFGQDNKCSIGQLFLSFFGQFASVKSLWVNGLAVSPFWGEWGDSTT 724
Query: 208 TQ---IHKNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETLQKPPGSISIDSLR 378
T K Y+M + DP D +NCAR++ L + ++ E+L +PP + SLR
Sbjct: 725 TNPAWNRKQYAMRVEDPFDRMDNCARSIQDAGLPIICNSFAAAFESLLQPPDWDQLLSLR 784
Query: 379 NFLF 390
LF
Sbjct: 785 QLLF 788
>ref|XP_002524216.1| zinc finger protein, putative [Ricinus communis]
gi|223536493|gb|EEF38140.1| zinc finger protein,
putative [Ricinus communis]
Length = 493
Score = 70.1 bits (170), Expect = 2e-09
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Frame = +1
Query: 19 EGILHHCTIKVRELISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVH 198
E I C + +SD+Y N+SS+ ELF+SFF +++ + + + L +C FTG+W+
Sbjct: 224 ERIKETCNANIARYMSDKYRAVNRSSLSELFISFFAKFS-GISLKAADLGICTFTGQWLD 282
Query: 199 IEHTQ--IHKNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETL 339
I T + K Y++ I DP + EN AR VS+ L ++ A + T L
Sbjct: 283 IRSTMRWLPKTYALFIEDPFEQPENAARAVSAGNLVKIAEAFQTTYHKL 331
>ref|XP_006435620.1| hypothetical protein CICLE_v10031537mg [Citrus clementina]
gi|557537816|gb|ESR48860.1| hypothetical protein
CICLE_v10031537mg [Citrus clementina]
Length = 445
Score = 69.7 bits (169), Expect = 3e-09
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 9/169 (5%)
Frame = +1
Query: 37 CTIKVRELISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEHTQ- 213
C + SD+Y + N+SS+ LFVSF +++ + + S L +C FTG+W HI
Sbjct: 230 CAFNIARFSSDKYRKINRSSLAHLFVSFLEKFS-GLSLKSSELGICPFTGQWEHIRSNTR 288
Query: 214 -IHKNYSMVIVDPIDHRENCARTVSSKALERLYHA-------LRETSETLQKPPGSISID 369
+ N+ + I DP + EN AR VS K L ++ +A L T++T S++
Sbjct: 289 WLPNNHPLFIEDPFEQPENSARAVSEKNLAKISNAFEMTHFRLTSTNQTRYALLSSLARP 348
Query: 370 SLRNFLFGCSQSREGQRTNQASSKKPQRYQNKKNHVEEMMANRGQGQQN 516
+ F FG S R N +PQ +++ + ++ + ++N
Sbjct: 349 YILQF-FGESPVRYANYNNGHRRARPQSHKSVNSPLQAQHQSHNARREN 396
>ref|XP_006486408.1| PREDICTED: poly(A) RNA polymerase GLD2-like isoform X1 [Citrus
sinensis] gi|568866114|ref|XP_006486409.1| PREDICTED:
poly(A) RNA polymerase GLD2-like isoform X2 [Citrus
sinensis]
Length = 445
Score = 68.6 bits (166), Expect = 6e-09
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 9/169 (5%)
Frame = +1
Query: 37 CTIKVRELISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEHTQ- 213
C + SD+Y + N+SS+ LFVSF +++ + + + L +C FTG+W HI
Sbjct: 230 CAFNIARFSSDKYRKINRSSLAHLFVSFLEKFS-GLSLKASELGICPFTGQWEHIRSNTR 288
Query: 214 -IHKNYSMVIVDPIDHRENCARTVSSKALERLYHA-------LRETSETLQKPPGSISID 369
+ N+ + I DP + EN AR VS K L ++ +A L T++T S++
Sbjct: 289 WLPNNHPLFIEDPFEQPENSARAVSEKNLAKISNAFEMTHFRLTSTNQTRYALLSSLARP 348
Query: 370 SLRNFLFGCSQSREGQRTNQASSKKPQRYQNKKNHVEEMMANRGQGQQN 516
+ F FG S R N +PQ +++ + ++ + ++N
Sbjct: 349 YILQF-FGESPVRYANYNNGHRRARPQSHKSVNSPLQAQHQSHNARREN 396
>ref|XP_006846360.1| hypothetical protein AMTR_s00012p00261420 [Amborella trichopoda]
gi|548849130|gb|ERN08035.1| hypothetical protein
AMTR_s00012p00261420 [Amborella trichopoda]
Length = 520
Score = 68.6 bits (166), Expect = 6e-09
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Frame = +1
Query: 25 ILHHCTIKVRELISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHI- 201
I H C K+ L + + + N+SS+ ELFVSFF ++ SQ A+C FTG+W ++
Sbjct: 229 IEHSCNEKIDRLRAQGFNQANKSSLAELFVSFFEKFTDIGTRSSQQ-AICTFTGRWENLY 287
Query: 202 -EHTQIHKNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETLQKP 348
+ K+Y +VI DP + NCAR+V + L R+ A T L+ P
Sbjct: 288 SKRDWTKKSYPLVIEDPFEQPTNCARSVRAFELLRISDAFNNTRGDLRSP 337
>gb|ESW35455.1| hypothetical protein PHAVU_001G236100g [Phaseolus vulgaris]
Length = 509
Score = 66.6 bits (161), Expect = 2e-08
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Frame = +1
Query: 25 ILHHCTIKVRELISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIE 204
I C + IS+ N+ SVP+LFV F +YA+ M+ W+ L +C +TG+W IE
Sbjct: 226 IAETCNAGINRHISNTARSINKKSVPDLFVEFLRKYAQ-MDSWASELGICPYTGQWEQIE 284
Query: 205 HTQI--HKNYSMVIVDPIDHRENCARTVSSKALERLYHALRET 327
+ I K YS+ + DP + +N AR+V++ L+++ +T
Sbjct: 285 NNTIWLPKTYSIFVEDPFEQPQNTARSVNAGQLKKISDTFSKT 327
>ref|XP_002879814.1| hypothetical protein ARALYDRAFT_321659 [Arabidopsis lyrata subsp.
lyrata] gi|297325653|gb|EFH56073.1| hypothetical protein
ARALYDRAFT_321659 [Arabidopsis lyrata subsp. lyrata]
Length = 500
Score = 66.6 bits (161), Expect = 2e-08
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 3/202 (1%)
Frame = +1
Query: 85 NQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEH--TQIHKNYSMVIVDPIDH 258
N+SS+ EL VSF+ +++ + + +Q L +C FTG+W +I T + K YS+ + DP +
Sbjct: 246 NRSSLSELLVSFYAKFSD-INLKAQELGVCPFTGRWENISSNTTWLPKTYSLFVEDPFEQ 304
Query: 259 RENCARTVSSKALERLYHALRETSETLQKPPGSISIDSLRNFLFGCSQSREGQRT-NQAS 435
N AR+VS + L+R+ + TS L D RN + G + Q + ++
Sbjct: 305 PVNAARSVSRRNLDRIAQVFQITSRRLVS-------DCNRNSIIGVLTGQHIQESLHRTI 357
Query: 436 SKKPQRYQNKKNHVEEMMANRGQGQQNYLQEILGNNNQSKQNYIQETITERMEHVAPRVF 615
S Q++ N ++V + GQ + N Q +QN+ Q T+ + P
Sbjct: 358 SLHSQQHANSMHNVRNL---HGQARH--------QNQQMQQNWSQSYNTQNPPYWPP--- 403
Query: 616 SEVDFPPLQRPLKQETFNNNHN 681
P RP + NN N
Sbjct: 404 -----PTQSRPQQNWPQNNLRN 420
>ref|XP_006296116.1| hypothetical protein CARUB_v10025267mg [Capsella rubella]
gi|482564824|gb|EOA29014.1| hypothetical protein
CARUB_v10025267mg [Capsella rubella]
Length = 499
Score = 65.1 bits (157), Expect = 7e-08
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 3/201 (1%)
Frame = +1
Query: 85 NQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEHTQ--IHKNYSMVIVDPIDH 258
N+SS+ EL VSFF +++ + + +Q L +C FTG+W +I + K YS+ + DP +
Sbjct: 245 NRSSLSELLVSFFAKFSD-INVKAQELGVCPFTGRWENISSNSRWLPKTYSLFVEDPFEQ 303
Query: 259 RENCARTVSSKALERLYHALRETSETLQKPPGSISIDSLRNFLFGCSQSREGQRT-NQAS 435
+N AR+VS + L+R+ + TS L + D RN + G ++ Q++ +
Sbjct: 304 PQNAARSVSRRNLDRIAQVFQMTSRRL-------ASDCNRNSIIGVMTGQQIQQSLYRTI 356
Query: 436 SKKPQRYQNKKNHVEEMMANRGQGQQNYLQEILGNNNQSKQNYIQETITERMEHVAPRVF 615
S Q + N ++V + GQ + N Q +QN+ Q T +
Sbjct: 357 SLHNQHHANGTHNVRNL---HGQSRP--------WNQQLQQNWSQSYNTPNPPY------ 399
Query: 616 SEVDFPPLQRPLKQETFNNNH 678
+PPL + Q+++ N+
Sbjct: 400 ----WPPLTQSRPQQSWYQNN 416
>ref|XP_004307468.1| PREDICTED: poly(A) RNA polymerase GLD2-like [Fragaria vesca subsp.
vesca]
Length = 549
Score = 65.1 bits (157), Expect = 7e-08
Identities = 76/343 (22%), Positives = 125/343 (36%), Gaps = 14/343 (4%)
Frame = +1
Query: 37 CTIKVRELISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEHTQ- 213
C +R + +N+SS+ ELF+SF +++ + + L +C ++GKW IE
Sbjct: 224 CVENIRRFKASRLRAQNKSSLSELFISFLRKFS-GLSSKAAELGICTYSGKWEAIESNMG 282
Query: 214 -IHKNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETLQKPPGSISIDSLRNFLF 390
+ K Y +++ DP D EN AR VS +AL R+ + + L S S+ + L
Sbjct: 283 WLPKTYCILVEDPFDRPENTARGVSLRALNRISGVFEMSRDRLIAASYSSSLAIESSLL- 341
Query: 391 GCSQSREGQRTNQASSKKPQRYQN-KKNHVEEMMANRGQGQQNYLQEILGNNNQSKQNYI 567
+ Q N +N + H + +MA + N + Y+
Sbjct: 342 --TTLVRPQTLNHIMRNLGYNIENHQTTHPQHIMAESSHSRTTRHYNGPPKPNGPYRPYV 399
Query: 568 QETITERMEHVAPRVFSEVDFPPLQRPLKQETFNNNHNSSPALISYNDSQVFNIVQEHNN 747
E + R H P+ P L+ P N Y V + Q H
Sbjct: 400 PELVPPRDYHNRPQKLKGPYVPVLESP------KNYSGQQKPTGPYVRELVDSSPQVHQQ 453
Query: 748 LNMLQNDEDTVQHNQSLRGHHMVPMHD-----------GHILQTHQMFIGEDMQSYCRNL 894
L +VQ + ++ PMH H Q + E + S
Sbjct: 454 L------RKSVQSSSQVKRQIQKPMHSSPQVKQQIQKPAHSSSQEQPLVRESVHS----T 503
Query: 895 NHTRFPISKAEYRSPAESIQQHYFASPTSANKQHGHPIWRPKK 1023
+ + P+ K + +S Q P +A + WRPKK
Sbjct: 504 SQVQSPLQKKKKEKAHQSPLQK--MKPENAPMLQTYQEWRPKK 544
>dbj|BAE99845.1| hypothetical protein [Arabidopsis thaliana]
Length = 511
Score = 65.1 bits (157), Expect = 7e-08
Identities = 59/225 (26%), Positives = 93/225 (41%), Gaps = 4/225 (1%)
Frame = +1
Query: 19 EGILHHCTIKVRELISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVH 198
E I + S+ N+SS+ EL VSFF +++ + + +Q +C FTG+W
Sbjct: 224 ESIAQVTAANIARFKSERAKSVNRSSLSELLVSFFAKFSD-INVKAQEFGVCPFTGRWET 282
Query: 199 IEH--TQIHKNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETLQKPPGSISIDS 372
I T + K YS+ + DP + N AR+VS + L+R+ + TS L +
Sbjct: 283 ISSNTTWLPKTYSLFVEDPFEQPVNAARSVSRRNLDRIAQVFQITSRRLVS-------EC 335
Query: 373 LRNFLFGCSQSREGQRTNQASSKKPQRYQNKKNHVEEMMANRGQGQQNYLQEILGNNNQS 552
RN + G + Q + + P ++ AN +N + N Q
Sbjct: 336 NRNSIIGILTGQHIQESLYRTISLPSQHH----------ANGMHNVRNLHGQARPQNQQM 385
Query: 553 KQNYIQETITERMEHVAPRVFSEVDFPPL--QRPLKQETFNNNHN 681
+QN+ Q T H +PPL RP + T NN N
Sbjct: 386 QQNWSQSYNTPNPPH----------WPPLTQSRPQQNWTQNNPRN 420
>ref|NP_181504.2| HEN1 suppressor 1 [Arabidopsis thaliana] gi|53850481|gb|AAU95417.1|
At2g39740 [Arabidopsis thaliana]
gi|55733735|gb|AAV59264.1| At2g39740 [Arabidopsis
thaliana] gi|330254623|gb|AEC09717.1| HEN1 suppressor 1
[Arabidopsis thaliana]
Length = 511
Score = 65.1 bits (157), Expect = 7e-08
Identities = 59/225 (26%), Positives = 93/225 (41%), Gaps = 4/225 (1%)
Frame = +1
Query: 19 EGILHHCTIKVRELISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVH 198
E I + S+ N+SS+ EL VSFF +++ + + +Q +C FTG+W
Sbjct: 224 ESIAQVTAANIARFKSERAKSVNRSSLSELLVSFFAKFSD-INVKAQEFGVCPFTGRWET 282
Query: 199 IEH--TQIHKNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETLQKPPGSISIDS 372
I T + K YS+ + DP + N AR+VS + L+R+ + TS L +
Sbjct: 283 ISSNTTWLPKTYSLFVEDPFEQPVNAARSVSRRNLDRIAQVFQITSRRLVS-------EC 335
Query: 373 LRNFLFGCSQSREGQRTNQASSKKPQRYQNKKNHVEEMMANRGQGQQNYLQEILGNNNQS 552
RN + G + Q + + P ++ AN +N + N Q
Sbjct: 336 NRNSIIGILTGQHIQESLYRTISLPSQHH----------ANGMHNVRNLHGQARPQNQQM 385
Query: 553 KQNYIQETITERMEHVAPRVFSEVDFPPL--QRPLKQETFNNNHN 681
+QN+ Q T H +PPL RP + T NN N
Sbjct: 386 QQNWSQSYNTPNPPH----------WPPLTQSRPQQNWTQNNPRN 420
>ref|XP_006601987.1| PREDICTED: poly(A) RNA polymerase cid11-like isoform X6 [Glycine
max]
Length = 374
Score = 63.2 bits (152), Expect = 3e-07
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Frame = +1
Query: 25 ILHHCTIKVRELISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIE 204
I C + IS+ N+ SV ELFV F ++AK M+ + + +C ++GKW IE
Sbjct: 185 IAQTCDANINRFISNRARSINRKSVAELFVEFIGKFAK-MDSMAVKMGICPYSGKWEQIE 243
Query: 205 HTQIH--KNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETL 339
I K Y++ + DP + +N AR+VS+ L+++ A T + L
Sbjct: 244 DNMIWLPKTYAIFVEDPFEQPQNTARSVSAGQLKKITEAFARTHDLL 290
>ref|XP_004503175.1| PREDICTED: poly(A) RNA polymerase GLD2-like [Cicer arietinum]
Length = 491
Score = 63.2 bits (152), Expect = 3e-07
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Frame = +1
Query: 37 CTIKVRELISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEHTQ- 213
C + ISD+ N+ SVPELF+ F ++A+ M+ W+ L +C ++G+ I++
Sbjct: 230 CGANINRFISDKSRTINRKSVPELFIDFLRKFAQ-MDSWASELGICPYSGQREQIKNNMR 288
Query: 214 -IHKNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETL 339
+ K Y++ + DP + EN AR+VS+ L ++ A +T L
Sbjct: 289 WLPKTYAIFVEDPFEQPENSARSVSAGQLRKIAEAFLKTYSLL 331
>ref|XP_006601982.1| PREDICTED: poly(A) RNA polymerase cid11-like isoform X1 [Glycine
max] gi|571542766|ref|XP_006601983.1| PREDICTED: poly(A)
RNA polymerase cid11-like isoform X2 [Glycine max]
gi|571542770|ref|XP_006601984.1| PREDICTED: poly(A) RNA
polymerase cid11-like isoform X3 [Glycine max]
gi|571542774|ref|XP_006601985.1| PREDICTED: poly(A) RNA
polymerase cid11-like isoform X4 [Glycine max]
Length = 415
Score = 63.2 bits (152), Expect = 3e-07
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Frame = +1
Query: 25 ILHHCTIKVRELISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIE 204
I C + IS+ N+ SV ELFV F ++AK M+ + + +C ++GKW IE
Sbjct: 226 IAQTCDANINRFISNRARSINRKSVAELFVEFIGKFAK-MDSMAVKMGICPYSGKWEQIE 284
Query: 205 HTQIH--KNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETL 339
I K Y++ + DP + +N AR+VS+ L+++ A T + L
Sbjct: 285 DNMIWLPKTYAIFVEDPFEQPQNTARSVSAGQLKKITEAFARTHDLL 331
>ref|XP_006591354.1| PREDICTED: poly(A) RNA polymerase cid11-like isoform X1 [Glycine
max] gi|571489968|ref|XP_006591355.1| PREDICTED: poly(A)
RNA polymerase cid11-like isoform X2 [Glycine max]
Length = 455
Score = 62.8 bits (151), Expect = 4e-07
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Frame = +1
Query: 25 ILHHCTIKVRELISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIE 204
I C + IS+ N+ SV ELFV F ++AK M+ + + +C +TGKW IE
Sbjct: 226 IAETCDANINRFISNRARSINRKSVAELFVDFVGKFAK-MDSMAVEMGICPYTGKWEQIE 284
Query: 205 HTQIH--KNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETL 339
I K Y++ + DP + +N AR+VS+ L+++ T + L
Sbjct: 285 DNMIWLPKTYAIFVEDPFEQPQNTARSVSAGQLKKITETFARTHDLL 331
>ref|XP_006411208.1| hypothetical protein EUTSA_v10016564mg [Eutrema salsugineum]
gi|567214704|ref|XP_006411209.1| hypothetical protein
EUTSA_v10016564mg [Eutrema salsugineum]
gi|557112377|gb|ESQ52661.1| hypothetical protein
EUTSA_v10016564mg [Eutrema salsugineum]
gi|557112378|gb|ESQ52662.1| hypothetical protein
EUTSA_v10016564mg [Eutrema salsugineum]
Length = 493
Score = 62.4 bits (150), Expect = 5e-07
Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Frame = +1
Query: 85 NQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEHTQ--IHKNYSMVIVDPIDH 258
N+SS+ EL VSFF +++ + + ++ L +C FTG+W +I + K YS+ + DP +
Sbjct: 241 NRSSLSELLVSFFAKFSD-INVKAKELGVCPFTGRWENISSNTRWLPKTYSLFVEDPFEQ 299
Query: 259 RENCARTVSSKALERLYHALRETSETL 339
EN AR+VS K+L+R+ TS L
Sbjct: 300 PENAARSVSRKSLDRIAQVFEMTSRRL 326
>ref|XP_004307469.1| PREDICTED: poly(A) RNA polymerase, mitochondrial-like [Fragaria
vesca subsp. vesca]
Length = 459
Score = 62.4 bits (150), Expect = 5e-07
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Frame = +1
Query: 37 CTIKVRELISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEH--T 210
C V SD++G N SS+ +LF+SF +++ + + ++ +C +TG+W I T
Sbjct: 230 CVANVTRFKSDKFGAVNTSSLSQLFISFLEKFSDLV-LKTRKSGICPYTGQWEDIASNMT 288
Query: 211 QIHKNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETL 339
+ + Y+++I DP D ENC+R VS L ++ A + +S L
Sbjct: 289 WLPQTYTIMIEDPFDQPENCSRAVSMGELTKISEACKMSSHIL 331
>ref|NP_001062505.1| Os08g0559900 [Oryza sativa Japonica Group]
gi|45736111|dbj|BAD13142.1| unknown protein [Oryza
sativa Japonica Group] gi|45736157|dbj|BAD13203.1|
unknown protein [Oryza sativa Japonica Group]
gi|113624474|dbj|BAF24419.1| Os08g0559900 [Oryza sativa
Japonica Group]
Length = 581
Score = 62.0 bits (149), Expect = 6e-07
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 4/198 (2%)
Frame = +1
Query: 73 YGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEHTQIHKNYSMVIVDPI 252
+G +N+ SV ELFVS ++ +W QGL F G W+ + N S + D +
Sbjct: 285 FGSRNKESVAELFVSLMSKLLSVEGLWEQGLCASNFEGSWIFKTWERGVGNLS--VEDFL 342
Query: 253 DHRENCARTVSSKALERLYHALRETSETLQK-PPGSISIDSLRNFLFGCSQSREGQRTNQ 429
D +N AR V + ++++ +R L G I L+N LF + + +
Sbjct: 343 DRSQNFARAVGKEEMQKISECIRVAVLNLNNFFRGKIDAPKLKNLLF--EPPHQDELISN 400
Query: 430 ASSKKPQRYQNKKNHVEEMMANRGQGQQNYLQEILG-NNNQSKQNYIQETIT--ERMEHV 600
S K+P+R K+H + Q QQ + I+G +NQ +Q ++ T+
Sbjct: 401 PSLKRPKR----KDHPTHGPESNPQ-QQKKAKHIIGPESNQKQQKKVKHTVNPGPAASRS 455
Query: 601 APRVFSEVDFPPLQRPLK 654
A + F P RP++
Sbjct: 456 ATNLHRPTAFVPQIRPIQ 473