BLASTX nr result

ID: Ephedra27_contig00011288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00011288
         (601 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004960338.1| PREDICTED: interactor of constitutive active...    58   2e-06
gb|AFW74770.1| hypothetical protein ZEAMMB73_196374 [Zea mays]         58   2e-06
ref|XP_006381491.1| myosin heavy chain-related family protein [P...    56   8e-06
dbj|BAJ91555.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   8e-06
ref|XP_002326334.1| predicted protein [Populus trichocarpa]            56   8e-06

>ref|XP_004960338.1| PREDICTED: interactor of constitutive active ROPs 2,
           chloroplastic-like [Setaria italica]
          Length = 609

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
 Frame = +3

Query: 165 MSTAPKKSRPSVSGPM--PVTPRGSRIRPTASDSGSNTPPAPARLSTDRSPRLKTTDHKS 338
           M T+  ++ PS +     P TPR SR+  T  +   +    P R  TDRSP  K T+ +S
Sbjct: 1   MQTSKTRNGPSDAPQRTSPRTPRASRVAKTGGNETDSAGVTPTRTPTDRSP--KVTEQRS 58

Query: 339 PRSPATTNEPKRPSKIXXXXXXXXXXXXXXKKTCEELNKVQDELIRAKKELSDLGLEKNH 518
           PRSP T  E KRPS++               +   +++++QDEL +AK++LS     + H
Sbjct: 59  PRSPIT--EKKRPSRL--------------SELESKVSQLQDELKKAKEQLSSSEARRRH 102


>gb|AFW74770.1| hypothetical protein ZEAMMB73_196374 [Zea mays]
          Length = 615

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 39/117 (33%), Positives = 60/117 (51%)
 Frame = +3

Query: 168 STAPKKSRPSVSGPMPVTPRGSRIRPTASDSGSNTPPAPARLSTDRSPRLKTTDHKSPRS 347
           S AP+++ P        TPR SR+  T  +   +T   P R  T+RSP  K T+ +SPRS
Sbjct: 11  SDAPQRTSPR-------TPRASRVAKTGGNETDSTGVTPTRTPTERSP--KVTERRSPRS 61

Query: 348 PATTNEPKRPSKIXXXXXXXXXXXXXXKKTCEELNKVQDELIRAKKELSDLGLEKNH 518
           P T  E KRPS++               +   +++++QDEL +AK++LS     + H
Sbjct: 62  PIT--EKKRPSRL--------------SELESKVSQLQDELKKAKEQLSSSEARRRH 102


>ref|XP_006381491.1| myosin heavy chain-related family protein [Populus trichocarpa]
           gi|550336195|gb|ERP59288.1| myosin heavy chain-related
           family protein [Populus trichocarpa]
          Length = 601

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
 Frame = +3

Query: 177 PKKSRPSVSGPM---PVTPRGSRIRPTASDSGSNTPPAPARLSTDRSPRLKTTDHKSPRS 347
           PK    S+  P    P TPR  +++   +++   +P   +R   DRSP  K T+ KSPRS
Sbjct: 4   PKAKTISLEVPRKKSPATPRTRQLKTPGAETDCVSPNPASRTPKDRSP--KVTERKSPRS 61

Query: 348 PATTNEPKRPSKIXXXXXXXXXXXXXXKKTCEELNKVQDELIRAKKELSD 497
           PAT  E KRPSKI              KK  E+LN  +    R+++E  D
Sbjct: 62  PAT--EKKRPSKISELESQLAQLQEDLKKAKEQLNTSESWKRRSQQEAED 109


>dbj|BAJ91555.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 612

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
 Frame = +3

Query: 213 PVTPRGSRIRPTASDSGSNTPPAPARLSTDRSPRLKTTDHKSPRSPATTNEPKRPSKIXX 392
           P TPR SR+  T  +   +    P R  T+RSP  K  + +SPRSP T  E KRPS++  
Sbjct: 20  PATPRSSRVAKTGGNETDSVGITPTRTPTERSP--KVIERRSPRSPVT--EKKRPSRLTE 75

Query: 393 XXXXXXXXXXXXKKTCEELN-------KVQDELIRAKKELSDLGLE 509
                       KKT E+L+       + Q E   AKK+  D+ L+
Sbjct: 76  LDSKVNQLQDELKKTKEQLSASEARRCQAQQEADEAKKQGQDVSLK 121


>ref|XP_002326334.1| predicted protein [Populus trichocarpa]
          Length = 601

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
 Frame = +3

Query: 177 PKKSRPSVSGPM---PVTPRGSRIRPTASDSGSNTPPAPARLSTDRSPRLKTTDHKSPRS 347
           PK    S+  P    P TPR  +++   +++   +P   +R   DRSP  K T+ KSPRS
Sbjct: 4   PKAKTISLEVPRKKSPATPRTRQLKTPGAETDCVSPNPASRTPKDRSP--KVTERKSPRS 61

Query: 348 PATTNEPKRPSKIXXXXXXXXXXXXXXKKTCEELNKVQDELIRAKKELSD 497
           PAT  E KRPSKI              KK  E+LN  +    R+++E  D
Sbjct: 62  PAT--EKKRPSKISELESQLAQLQEDLKKAKEQLNTSESWKRRSQQEAED 109


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