BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00011172
         (402 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006856202.1| hypothetical protein AMTR_s00059p00193620 [A...   219   3e-55
emb|CBI28783.3| unnamed protein product [Vitis vinifera]              216   3e-54
ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis v...   216   3e-54
ref|XP_001773082.1| predicted protein [Physcomitrella patens] gi...   213   2e-53
ref|NP_200341.1| DNA topoisomerase 1 [Arabidopsis thaliana] gi|2...   213   3e-53
ref|NP_001190543.1| DNA topoisomerase 1 [Arabidopsis thaliana] g...   213   3e-53
ref|XP_001773330.1| predicted protein [Physcomitrella patens] gi...   213   3e-53
dbj|BAD93853.1| DNA topoisomerase I [Arabidopsis thaliana]            213   3e-53
gb|AAM14018.1| putative DNA topoisomerase I [Arabidopsis thaliana]    213   3e-53
ref|XP_006401468.1| hypothetical protein EUTSA_v10012622mg [Eutr...   212   5e-53
ref|XP_002866086.1| TOP1BETA [Arabidopsis lyrata subsp. lyrata] ...   212   5e-53
ref|XP_006279572.1| hypothetical protein CARUB_v10025842mg [Caps...   209   2e-52
ref|XP_006279978.1| hypothetical protein CARUB_v10025848mg [Caps...   209   4e-52
ref|XP_002866087.1| TOP1alpha [Arabidopsis lyrata subsp. lyrata]...   209   4e-52
ref|NP_200342.1| DNA topoisomerase 1 beta [Arabidopsis thaliana]...   207   1e-51
gb|EOY12192.1| DNA topoisomerase I alpha isoform 4, partial [The...   207   1e-51
gb|EOY12191.1| DNA topoisomerase I alpha isoform 3 [Theobroma ca...   207   1e-51
gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma ca...   207   1e-51
ref|XP_004296769.1| PREDICTED: DNA topoisomerase 1-like [Fragari...   207   1e-51
ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus ...   206   3e-51

>ref|XP_006856202.1| hypothetical protein AMTR_s00059p00193620 [Amborella trichopoda]
           gi|548860061|gb|ERN17669.1| hypothetical protein
           AMTR_s00059p00193620 [Amborella trichopoda]
          Length = 884

 Score =  219 bits (558), Expect = 3e-55
 Identities = 108/128 (84%), Positives = 117/128 (91%)
 Frame = -2

Query: 401 QIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSIQFDFLGKDSIRYFN 222
           Q A+ATYLID+LALRAGNEKDDDEADTVGCCTLKVENV L+  SS+QFDFLGKDSIRYFN
Sbjct: 611 QTAIATYLIDRLALRAGNEKDDDEADTVGCCTLKVENVTLLPLSSLQFDFLGKDSIRYFN 670

Query: 221 TVDVKPEVYKAIGQFKKGKRESDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLD 42
           TV+V P VYKAIG F+ GK+E DDLFD+LDTSKLNAHLKELMPGLTAKVFRTYNAS TLD
Sbjct: 671 TVEVLPPVYKAIGDFRSGKKEGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASETLD 730

Query: 41  RLLQETKG 18
           RLLQ+T G
Sbjct: 731 RLLQDTTG 738


>emb|CBI28783.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  216 bits (549), Expect = 3e-54
 Identities = 109/131 (83%), Positives = 119/131 (90%), Gaps = 1/131 (0%)
 Frame = -2

Query: 401 QIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSIQFDFLGKDSIRYFN 222
           QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKVENVALV P+ ++FDFLGKDSIRYFN
Sbjct: 437 QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALVPPNKLEFDFLGKDSIRYFN 496

Query: 221 TVDVKPEVYKAIGQFKKGKRESDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLD 42
           TV+V+  VYKAIGQFK GK   DDLFD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLD
Sbjct: 497 TVEVELPVYKAIGQFKTGKSGGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLD 556

Query: 41  RLL-QETKGVD 12
            +L +E +G D
Sbjct: 557 EMLNREARGGD 567


>ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 883

 Score =  216 bits (549), Expect = 3e-54
 Identities = 109/131 (83%), Positives = 119/131 (90%), Gaps = 1/131 (0%)
 Frame = -2

Query: 401 QIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSIQFDFLGKDSIRYFN 222
           QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKVENVALV P+ ++FDFLGKDSIRYFN
Sbjct: 596 QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALVPPNKLEFDFLGKDSIRYFN 655

Query: 221 TVDVKPEVYKAIGQFKKGKRESDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLD 42
           TV+V+  VYKAIGQFK GK   DDLFD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLD
Sbjct: 656 TVEVELPVYKAIGQFKTGKSGGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLD 715

Query: 41  RLL-QETKGVD 12
            +L +E +G D
Sbjct: 716 EMLNREARGGD 726


>ref|XP_001773082.1| predicted protein [Physcomitrella patens]
           gi|162675629|gb|EDQ62122.1| predicted protein
           [Physcomitrella patens]
          Length = 502

 Score =  213 bits (542), Expect = 2e-53
 Identities = 103/128 (80%), Positives = 117/128 (91%)
 Frame = -2

Query: 401 QIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSIQFDFLGKDSIRYFN 222
           QIAVATYLID+LALRAGNEKD+DEADTVGCC+LKVE+V+L+ P S+QFDFLGKDSIRYFN
Sbjct: 216 QIAVATYLIDRLALRAGNEKDEDEADTVGCCSLKVEHVSLIAPKSLQFDFLGKDSIRYFN 275

Query: 221 TVDVKPEVYKAIGQFKKGKRESDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLD 42
           TV+V   VYKAIGQFKKGK+  DDLF+ LDT+KLN HLK +MPGLTAKVFRTYNASITLD
Sbjct: 276 TVEVDERVYKAIGQFKKGKKGGDDLFERLDTTKLNLHLKGIMPGLTAKVFRTYNASITLD 335

Query: 41  RLLQETKG 18
            LLQ+T+G
Sbjct: 336 TLLQDTRG 343


>ref|NP_200341.1| DNA topoisomerase 1 [Arabidopsis thaliana]
            gi|267146|sp|P30181.1|TOP1_ARATH RecName: Full=DNA
            topoisomerase 1; AltName: Full=DNA topoisomerase I
            gi|16558|emb|CAA40763.1| topoisomerase I [Arabidopsis
            thaliana] gi|9758162|dbj|BAB08547.1| DNA topoisomerase I
            [Arabidopsis thaliana] gi|332009229|gb|AED96612.1| DNA
            topoisomerase 1 [Arabidopsis thaliana]
            gi|445137|prf||1908437A topoisomerase I
          Length = 916

 Score =  213 bits (541), Expect = 3e-53
 Identities = 107/134 (79%), Positives = 120/134 (89%), Gaps = 1/134 (0%)
 Frame = -2

Query: 401  QIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSIQFDFLGKDSIRYFN 222
            QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV  + P+ I+FDFLGKDSI+Y N
Sbjct: 626  QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKIKFDFLGKDSIQYVN 685

Query: 221  TVDVKPEVYKAIGQFKKGKRESDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLD 42
            TV+V+P VYKAIGQF+ GK ++DDLFDELDTSKLNAHLKEL+PGLTAKVFRTYNASITLD
Sbjct: 686  TVEVEPLVYKAIGQFQAGKSKTDDLFDELDTSKLNAHLKELVPGLTAKVFRTYNASITLD 745

Query: 41   RLL-QETKGVDIPQ 3
             +L QETK  D+ Q
Sbjct: 746  EMLSQETKDGDVTQ 759


>ref|NP_001190543.1| DNA topoisomerase 1 [Arabidopsis thaliana]
            gi|332009230|gb|AED96613.1| DNA topoisomerase 1
            [Arabidopsis thaliana]
          Length = 933

 Score =  213 bits (541), Expect = 3e-53
 Identities = 107/134 (79%), Positives = 120/134 (89%), Gaps = 1/134 (0%)
 Frame = -2

Query: 401  QIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSIQFDFLGKDSIRYFN 222
            QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV  + P+ I+FDFLGKDSI+Y N
Sbjct: 626  QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKIKFDFLGKDSIQYVN 685

Query: 221  TVDVKPEVYKAIGQFKKGKRESDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLD 42
            TV+V+P VYKAIGQF+ GK ++DDLFDELDTSKLNAHLKEL+PGLTAKVFRTYNASITLD
Sbjct: 686  TVEVEPLVYKAIGQFQAGKSKTDDLFDELDTSKLNAHLKELVPGLTAKVFRTYNASITLD 745

Query: 41   RLL-QETKGVDIPQ 3
             +L QETK  D+ Q
Sbjct: 746  EMLSQETKDGDVTQ 759


>ref|XP_001773330.1| predicted protein [Physcomitrella patens]
           gi|162675372|gb|EDQ61868.1| predicted protein
           [Physcomitrella patens]
          Length = 632

 Score =  213 bits (541), Expect = 3e-53
 Identities = 104/128 (81%), Positives = 115/128 (89%)
 Frame = -2

Query: 401 QIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSIQFDFLGKDSIRYFN 222
           QIAVATYLID+LALRAGNEKD+DEADTVGCC+LKVE+V LV P S+QFDFLGKDSIRYFN
Sbjct: 346 QIAVATYLIDRLALRAGNEKDEDEADTVGCCSLKVEHVTLVAPKSLQFDFLGKDSIRYFN 405

Query: 221 TVDVKPEVYKAIGQFKKGKRESDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLD 42
           TV+V   VYKAIGQFKKGK+E DDLF+ LDT+KLN HLK +MP LTAKVFRTYNASITLD
Sbjct: 406 TVEVDERVYKAIGQFKKGKKEGDDLFERLDTTKLNLHLKGIMPSLTAKVFRTYNASITLD 465

Query: 41  RLLQETKG 18
            LLQ+T G
Sbjct: 466 NLLQDTTG 473


>dbj|BAD93853.1| DNA topoisomerase I [Arabidopsis thaliana]
          Length = 396

 Score =  213 bits (541), Expect = 3e-53
 Identities = 107/134 (79%), Positives = 120/134 (89%), Gaps = 1/134 (0%)
 Frame = -2

Query: 401 QIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSIQFDFLGKDSIRYFN 222
           QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV  + P+ I+FDFLGKDSI+Y N
Sbjct: 106 QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKIKFDFLGKDSIQYVN 165

Query: 221 TVDVKPEVYKAIGQFKKGKRESDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLD 42
           TV+V+P VYKAIGQF+ GK ++DDLFDELDTSKLNAHLKEL+PGLTAKVFRTYNASITLD
Sbjct: 166 TVEVEPLVYKAIGQFQAGKSKTDDLFDELDTSKLNAHLKELVPGLTAKVFRTYNASITLD 225

Query: 41  RLL-QETKGVDIPQ 3
            +L QETK  D+ Q
Sbjct: 226 EMLSQETKDGDVTQ 239


>gb|AAM14018.1| putative DNA topoisomerase I [Arabidopsis thaliana]
          Length = 514

 Score =  213 bits (541), Expect = 3e-53
 Identities = 107/134 (79%), Positives = 120/134 (89%), Gaps = 1/134 (0%)
 Frame = -2

Query: 401 QIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSIQFDFLGKDSIRYFN 222
           QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV  + P+ I+FDFLGKDSI+Y N
Sbjct: 224 QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKIKFDFLGKDSIQYVN 283

Query: 221 TVDVKPEVYKAIGQFKKGKRESDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLD 42
           TV+V+P VYKAIGQF+ GK ++DDLFDELDTSKLNAHLKEL+PGLTAKVFRTYNASITLD
Sbjct: 284 TVEVEPLVYKAIGQFQAGKSKTDDLFDELDTSKLNAHLKELVPGLTAKVFRTYNASITLD 343

Query: 41  RLL-QETKGVDIPQ 3
            +L QETK  D+ Q
Sbjct: 344 EMLSQETKDGDVTQ 357


>ref|XP_006401468.1| hypothetical protein EUTSA_v10012622mg [Eutrema salsugineum]
            gi|567179002|ref|XP_006401469.1| hypothetical protein
            EUTSA_v10012622mg [Eutrema salsugineum]
            gi|557102558|gb|ESQ42921.1| hypothetical protein
            EUTSA_v10012622mg [Eutrema salsugineum]
            gi|557102559|gb|ESQ42922.1| hypothetical protein
            EUTSA_v10012622mg [Eutrema salsugineum]
          Length = 904

 Score =  212 bits (539), Expect = 5e-53
 Identities = 104/134 (77%), Positives = 122/134 (91%), Gaps = 1/134 (0%)
 Frame = -2

Query: 401  QIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSIQFDFLGKDSIRYFN 222
            QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV  + P+ ++FDFLGKDSI+Y N
Sbjct: 617  QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVDCIPPNKLKFDFLGKDSIQYVN 676

Query: 221  TVDVKPEVYKAIGQFKKGKRESDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLD 42
            TV+V+P VYKAIGQF+ GK ++DDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLD
Sbjct: 677  TVEVEPPVYKAIGQFQAGKSKTDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLD 736

Query: 41   RLL-QETKGVDIPQ 3
            ++L +ET+  ++P+
Sbjct: 737  QMLSKETRDGEVPE 750


>ref|XP_002866086.1| TOP1BETA [Arabidopsis lyrata subsp. lyrata]
            gi|297311921|gb|EFH42345.1| TOP1BETA [Arabidopsis lyrata
            subsp. lyrata]
          Length = 922

 Score =  212 bits (539), Expect = 5e-53
 Identities = 107/134 (79%), Positives = 120/134 (89%), Gaps = 1/134 (0%)
 Frame = -2

Query: 401  QIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSIQFDFLGKDSIRYFN 222
            QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV  + P+ I+FDFLGKDSI+Y N
Sbjct: 630  QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKIKFDFLGKDSIQYVN 689

Query: 221  TVDVKPEVYKAIGQFKKGKRESDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLD 42
            TV+V+P VYKAIGQF+ GK ++DDLFDELDTSKLNAHLKEL+PGLTAKVFRTYNASITLD
Sbjct: 690  TVEVEPLVYKAIGQFQAGKSKTDDLFDELDTSKLNAHLKELVPGLTAKVFRTYNASITLD 749

Query: 41   RLL-QETKGVDIPQ 3
             +L QETK  D+ Q
Sbjct: 750  EMLSQETKDGDLNQ 763


>ref|XP_006279572.1| hypothetical protein CARUB_v10025842mg [Capsella rubella]
            gi|482548276|gb|EOA12470.1| hypothetical protein
            CARUB_v10025842mg [Capsella rubella]
          Length = 923

 Score =  209 bits (533), Expect = 2e-52
 Identities = 106/134 (79%), Positives = 119/134 (88%), Gaps = 1/134 (0%)
 Frame = -2

Query: 401  QIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSIQFDFLGKDSIRYFN 222
            QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV  + P+ I+FDFLGKDSI+Y N
Sbjct: 631  QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKIKFDFLGKDSIQYVN 690

Query: 221  TVDVKPEVYKAIGQFKKGKRESDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLD 42
            TV+V+P VYKAIGQF+ GK ++DDLFD LDTSKLNAHLKEL+PGLTAKVFRTYNASITLD
Sbjct: 691  TVEVEPLVYKAIGQFQAGKSKTDDLFDMLDTSKLNAHLKELVPGLTAKVFRTYNASITLD 750

Query: 41   RLL-QETKGVDIPQ 3
             +L QETK  D+ Q
Sbjct: 751  EMLSQETKDGDVNQ 764


>ref|XP_006279978.1| hypothetical protein CARUB_v10025848mg [Capsella rubella]
            gi|482548682|gb|EOA12876.1| hypothetical protein
            CARUB_v10025848mg [Capsella rubella]
          Length = 915

 Score =  209 bits (531), Expect = 4e-52
 Identities = 104/134 (77%), Positives = 120/134 (89%), Gaps = 1/134 (0%)
 Frame = -2

Query: 401  QIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSIQFDFLGKDSIRYFN 222
            QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV  + P+ ++FDFLGKDSI+Y N
Sbjct: 622  QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVN 681

Query: 221  TVDVKPEVYKAIGQFKKGKRESDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLD 42
            TV+V+P VYKAIGQF+ GK ++DDLFDELDTSKLNAHLKELM GLTAKVFRTYNASITLD
Sbjct: 682  TVEVEPLVYKAIGQFQAGKSKADDLFDELDTSKLNAHLKELMAGLTAKVFRTYNASITLD 741

Query: 41   RLL-QETKGVDIPQ 3
             +L +ET+  D+P+
Sbjct: 742  LMLSKETRDGDVPE 755


>ref|XP_002866087.1| TOP1alpha [Arabidopsis lyrata subsp. lyrata]
            gi|297311922|gb|EFH42346.1| TOP1alpha [Arabidopsis lyrata
            subsp. lyrata]
          Length = 911

 Score =  209 bits (531), Expect = 4e-52
 Identities = 104/134 (77%), Positives = 120/134 (89%), Gaps = 1/134 (0%)
 Frame = -2

Query: 401  QIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSIQFDFLGKDSIRYFN 222
            QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV  + P+ ++FDFLGKDSI+Y N
Sbjct: 618  QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVN 677

Query: 221  TVDVKPEVYKAIGQFKKGKRESDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLD 42
            TV+V+P VYKAIGQF+ GK ++DDLFDELDTSKLNAHLKELM GLTAKVFRTYNASITLD
Sbjct: 678  TVEVEPLVYKAIGQFQAGKSKTDDLFDELDTSKLNAHLKELMAGLTAKVFRTYNASITLD 737

Query: 41   RLL-QETKGVDIPQ 3
             +L +ET+  D+P+
Sbjct: 738  LMLSKETRDGDVPE 751


>ref|NP_200342.1| DNA topoisomerase 1 beta [Arabidopsis thaliana]
            gi|9758163|dbj|BAB08548.1| DNA topoisomerase I
            [Arabidopsis thaliana] gi|110741973|dbj|BAE98926.1| DNA
            topoisomerase I like protein [Arabidopsis thaliana]
            gi|332009232|gb|AED96615.1| DNA topoisomerase 1 beta
            [Arabidopsis thaliana]
          Length = 917

 Score =  207 bits (527), Expect = 1e-51
 Identities = 103/134 (76%), Positives = 119/134 (88%), Gaps = 1/134 (0%)
 Frame = -2

Query: 401  QIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSIQFDFLGKDSIRYFN 222
            QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV  + P+ ++FDFLGKDSI+Y N
Sbjct: 624  QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVN 683

Query: 221  TVDVKPEVYKAIGQFKKGKRESDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLD 42
            TV+V+P VYKAIGQF+ GK ++DDLFDELDTSKLN HLKELM GLTAKVFRTYNASITLD
Sbjct: 684  TVEVEPLVYKAIGQFQAGKSKTDDLFDELDTSKLNTHLKELMAGLTAKVFRTYNASITLD 743

Query: 41   RLL-QETKGVDIPQ 3
             +L +ET+  D+P+
Sbjct: 744  LMLSKETRDGDVPE 757


>gb|EOY12192.1| DNA topoisomerase I alpha isoform 4, partial [Theobroma cacao]
          Length = 733

 Score =  207 bits (527), Expect = 1e-51
 Identities = 104/134 (77%), Positives = 119/134 (88%), Gaps = 1/134 (0%)
 Frame = -2

Query: 401 QIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSIQFDFLGKDSIRYFN 222
           QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV  + P+ ++FDFLGKDSI+Y N
Sbjct: 490 QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVN 549

Query: 221 TVDVKPEVYKAIGQFKKGKRESDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLD 42
           TV+V+  VYKAIGQF+ GK +SDDLFD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLD
Sbjct: 550 TVEVELPVYKAIGQFQTGKSKSDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLD 609

Query: 41  RLL-QETKGVDIPQ 3
            +L +ETK  D+ +
Sbjct: 610 EMLNKETKDGDVAE 623


>gb|EOY12191.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao]
            gi|508720296|gb|EOY12193.1| DNA topoisomerase I alpha
            isoform 3 [Theobroma cacao]
          Length = 836

 Score =  207 bits (527), Expect = 1e-51
 Identities = 104/134 (77%), Positives = 119/134 (88%), Gaps = 1/134 (0%)
 Frame = -2

Query: 401  QIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSIQFDFLGKDSIRYFN 222
            QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV  + P+ ++FDFLGKDSI+Y N
Sbjct: 617  QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVN 676

Query: 221  TVDVKPEVYKAIGQFKKGKRESDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLD 42
            TV+V+  VYKAIGQF+ GK +SDDLFD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLD
Sbjct: 677  TVEVELPVYKAIGQFQTGKSKSDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLD 736

Query: 41   RLL-QETKGVDIPQ 3
             +L +ETK  D+ +
Sbjct: 737  EMLNKETKDGDVAE 750


>gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
            gi|508720293|gb|EOY12190.1| DNA topoisomerase I alpha
            isoform 1 [Theobroma cacao]
          Length = 904

 Score =  207 bits (527), Expect = 1e-51
 Identities = 104/134 (77%), Positives = 119/134 (88%), Gaps = 1/134 (0%)
 Frame = -2

Query: 401  QIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSIQFDFLGKDSIRYFN 222
            QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV  + P+ ++FDFLGKDSI+Y N
Sbjct: 617  QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVN 676

Query: 221  TVDVKPEVYKAIGQFKKGKRESDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLD 42
            TV+V+  VYKAIGQF+ GK +SDDLFD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLD
Sbjct: 677  TVEVELPVYKAIGQFQTGKSKSDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLD 736

Query: 41   RLL-QETKGVDIPQ 3
             +L +ETK  D+ +
Sbjct: 737  EMLNKETKDGDVAE 750


>ref|XP_004296769.1| PREDICTED: DNA topoisomerase 1-like [Fragaria vesca subsp. vesca]
          Length = 838

 Score =  207 bits (526), Expect = 1e-51
 Identities = 104/132 (78%), Positives = 119/132 (90%), Gaps = 1/132 (0%)
 Frame = -2

Query: 401 QIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSIQFDFLGKDSIRYFN 222
           QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKVENV  + P+S++F+FLGKDSIRY N
Sbjct: 551 QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAIPPNSLEFNFLGKDSIRYEN 610

Query: 221 TVDVKPEVYKAIGQFKKGKRESDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLD 42
           TV+V+P VYK I +F++GK++SDDLFD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLD
Sbjct: 611 TVEVEPAVYKEIKKFQEGKKDSDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLD 670

Query: 41  -RLLQETKGVDI 9
             L QET   D+
Sbjct: 671 NELNQETTEGDV 682


>ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus communis]
            gi|223531500|gb|EEF33331.1| DNA topoisomerase type I,
            putative [Ricinus communis]
          Length = 891

 Score =  206 bits (523), Expect = 3e-51
 Identities = 104/135 (77%), Positives = 122/135 (90%), Gaps = 2/135 (1%)
 Frame = -2

Query: 401  QIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPS-SIQFDFLGKDSIRYF 225
            QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV  +  S +++FDFLGKDSIRY 
Sbjct: 603  QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVANVECIPGSFNLKFDFLGKDSIRYE 662

Query: 224  NTVDVKPEVYKAIGQFKKGKRESDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITL 45
            NTV+VKPEVY+AIG F+KGK+++DDLFD+LDT+KLNAHLKELMPGLTAKVFRTYNASITL
Sbjct: 663  NTVEVKPEVYEAIGTFQKGKKQTDDLFDKLDTTKLNAHLKELMPGLTAKVFRTYNASITL 722

Query: 44   D-RLLQETKGVDIPQ 3
            D +L +ET+  D+ +
Sbjct: 723  DEKLYEETEDGDVAE 737