BLASTX nr result

ID: Ephedra27_contig00011107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00011107
         (599 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22463.1| unknown [Picea sitchensis] gi|116793226|gb|ABK266...    61   3e-07
gb|ABK21222.1| unknown [Picea sitchensis] gi|116790907|gb|ABK257...    60   6e-07
ref|XP_002987765.1| rab family GTPase [Selaginella moellendorffi...    57   3e-06

>gb|ABK22463.1| unknown [Picea sitchensis] gi|116793226|gb|ABK26663.1| unknown
           [Picea sitchensis] gi|224284237|gb|ACN39854.1| unknown
           [Picea sitchensis]
          Length = 200

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 29/38 (76%), Positives = 34/38 (89%), Gaps = 1/38 (2%)
 Frame = +1

Query: 1   LFYEIARKLPKAKPAQQPAGMVLADRAAERPK-SNCCS 111
           LFYEIAR+LPKA+P Q PAGMVLADR+AER + S+CCS
Sbjct: 163 LFYEIARRLPKAEPVQHPAGMVLADRSAERARSSSCCS 200


>gb|ABK21222.1| unknown [Picea sitchensis] gi|116790907|gb|ABK25786.1| unknown
           [Picea sitchensis]
          Length = 200

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 28/38 (73%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
 Frame = +1

Query: 1   LFYEIARKLPKAKPAQQPAGMVLADRAAERPKS-NCCS 111
           LFYEIAR+LPKA+P QQPAGMVL DR AER ++ +CCS
Sbjct: 163 LFYEIARRLPKARPVQQPAGMVLTDRPAERARTYSCCS 200


>ref|XP_002987765.1| rab family GTPase [Selaginella moellendorffii]
           gi|302821214|ref|XP_002992271.1| rab family GTPase
           [Selaginella moellendorffii] gi|300139921|gb|EFJ06652.1|
           rab family GTPase [Selaginella moellendorffii]
           gi|300144384|gb|EFJ11068.1| rab family GTPase
           [Selaginella moellendorffii]
          Length = 199

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 27/37 (72%), Positives = 29/37 (78%)
 Frame = +1

Query: 1   LFYEIARKLPKAKPAQQPAGMVLADRAAERPKSNCCS 111
           LFYEIARKLPKA+PAQQ  GMVL DR  E  KS CC+
Sbjct: 163 LFYEIARKLPKAQPAQQNTGMVLTDRPIETKKSACCN 199


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