BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00011074
         (3150 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006849925.1| hypothetical protein AMTR_s00022p00114710 [A...  1434   0.0  
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1427   0.0  
ref|XP_001757495.1| predicted protein [Physcomitrella patens] gi...  1427   0.0  
ref|XP_006598183.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1402   0.0  
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1397   0.0  
ref|XP_006648214.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1390   0.0  
gb|ESW21254.1| hypothetical protein PHAVU_005G055300g [Phaseolus...  1390   0.0  
ref|XP_003571468.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1390   0.0  
gb|EOY19724.1| U5 small nuclear ribonucleoprotein helicase, puta...  1389   0.0  
gb|EEE56150.1| hypothetical protein OsJ_05035 [Oryza sativa Japo...  1388   0.0  
gb|EAY84119.1| hypothetical protein OsI_05501 [Oryza sativa Indi...  1388   0.0  
ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1384   0.0  
ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1381   0.0  
ref|XP_002463258.1| hypothetical protein SORBIDRAFT_02g040700 [S...  1381   0.0  
ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1376   0.0  
ref|XP_006428572.1| hypothetical protein CICLE_v100108901mg, par...  1376   0.0  
tpg|DAA63842.1| TPA: hypothetical protein ZEAMMB73_506422 [Zea m...  1374   0.0  
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1373   0.0  
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc...  1370   0.0  
ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa h...  1370   0.0  

>ref|XP_006849925.1| hypothetical protein AMTR_s00022p00114710 [Amborella trichopoda]
            gi|548853523|gb|ERN11506.1| hypothetical protein
            AMTR_s00022p00114710 [Amborella trichopoda]
          Length = 2171

 Score = 1434 bits (3711), Expect = 0.0
 Identities = 734/901 (81%), Positives = 802/901 (89%), Gaps = 1/901 (0%)
 Frame = -2

Query: 2702 GGIDDEDMENADEGMNLNVQDIDAYWLQRKITQAHSSAIDPQRSQQLAEEVLRILAGDGD 2523
            GG+DD+D+E ADEG  LNVQDIDAYWLQRKITQA++  IDPQ SQ+LAEEVL+ILA +GD
Sbjct: 257  GGLDDDDVEEADEG--LNVQDIDAYWLQRKITQAYTD-IDPQHSQKLAEEVLKILA-EGD 312

Query: 2522 SRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSEDQEERKRIEYEMSGDGV-LR 2346
             RDVEN LV LLD++KFDLIKLLLRNR K+VWCTRLAR+EDQ++RK IE EM   G  L 
Sbjct: 313  DRDVENRLVMLLDYDKFDLIKLLLRNRLKVVWCTRLARAEDQKQRKSIEEEMMDGGPGLV 372

Query: 2345 AILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXXXXXXXXXGMENSWLKGQRQ 2166
            AILEQLHATRATAKERQKNLE+S+R+EAR+L                  +ENSWLKGQR 
Sbjct: 373  AILEQLHATRATAKERQKNLEKSIRDEARRLKDDGDRERRLERDGFP--VENSWLKGQRH 430

Query: 2165 LLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVHXXXXXXXPLSDGEDLIKITDM 1986
            LLDLE ++F +GGLLMANKKCELP GS+R+ +KGYEEVH       P++ GE+LIKI  +
Sbjct: 431  LLDLEILAFQKGGLLMANKKCELPPGSYRTPKKGYEEVHVPALKPKPMAPGEELIKIAVL 490

Query: 1985 PEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGP 1806
            PEW QPAF  MK LNRVQSRVYETALFT EN+LLCAPTGAGKTNVA+LTILQQ+GL+R  
Sbjct: 491  PEWAQPAFSEMKQLNRVQSRVYETALFTPENILLCAPTGAGKTNVAMLTILQQLGLHRNA 550

Query: 1805 DGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQIIV 1626
            DG  D SS+KIVYVAPMKALVAEVVGNLSKRL  Y ++VKELTGDQ+LSRQQIEETQIIV
Sbjct: 551  DGSFDNSSYKIVYVAPMKALVAEVVGNLSKRLQAYGVSVKELTGDQTLSRQQIEETQIIV 610

Query: 1625 TTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIR 1446
            TTPEKWDIITRKSGDRTYTQLVK           DNRGPVLESIVSRTVRQIETT+E IR
Sbjct: 611  TTPEKWDIITRKSGDRTYTQLVKLLIVDEIHLLHDNRGPVLESIVSRTVRQIETTKEHIR 670

Query: 1445 LVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDI 1266
            LVGLSATLPNY+DVALFLRVDK KGLF+FDNSYRPCPL+QQYIG+TV+KPLQRFQLMNDI
Sbjct: 671  LVGLSATLPNYQDVALFLRVDKDKGLFHFDNSYRPCPLAQQYIGITVKKPLQRFQLMNDI 730

Query: 1265 CYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESE 1086
            CY+KV + AGKHQVLVFVHSRKETAKTAR IRD ALANDT+GRF+K D  SREIL SE+E
Sbjct: 731  CYKKVEAIAGKHQVLVFVHSRKETAKTARAIRDTALANDTLGRFLKEDSVSREILQSEAE 790

Query: 1085 KVKNTDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTVI 906
             VK+T+LKD+LPYGFAIHHAGM+R DRTLVE+LF D HIQVLVSTATLAWGVNLPAHTVI
Sbjct: 791  NVKSTELKDLLPYGFAIHHAGMTRADRTLVEELFSDSHIQVLVSTATLAWGVNLPAHTVI 850

Query: 905  IKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQL 726
            IKGTQIYNPEKG WTELSPLD+MQMLGRAGRPQYD+YGEGII+TGHSELQYYLSLMN+QL
Sbjct: 851  IKGTQIYNPEKGIWTELSPLDVMQMLGRAGRPQYDTYGEGIILTGHSELQYYLSLMNEQL 910

Query: 725  PIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDN 546
            PIESQFVSKLAD LNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGL+ DA+EKD 
Sbjct: 911  PIESQFVSKLADQLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLTTDAIEKDK 970

Query: 545  TLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKP 366
            TLEERRADL+HSAATILD+NNLVKYDRKSGYFQVTDLGRI+SYYYISHGT+STYNEHLKP
Sbjct: 971  TLEERRADLVHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKP 1030

Query: 365  TMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKESLEEPSAKINVLLQARI 186
            TMGDIELCRLFSLSEEFKYVTVR++EKMELAKLLDRVPIPVKESLEEP AKINVLLQA I
Sbjct: 1031 TMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPCAKINVLLQAYI 1090

Query: 185  SQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQT 6
            SQLKLEGLSL SDMV+ITQ+AGRLLRALFEIVLKRGWAQLAE+AL LCKMV KRMWSVQT
Sbjct: 1091 SQLKLEGLSLASDMVYITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVGKRMWSVQT 1150

Query: 5    P 3
            P
Sbjct: 1151 P 1151



 Score =  300 bits (769), Expect = 2e-78
 Identities = 204/654 (31%), Positives = 333/654 (50%), Gaps = 9/654 (1%)
 Frame = -2

Query: 1952 KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKI 1773
            K+ N +Q++V+     + +N+L+ APTG+GKT  A   +L+     +GPD     S  ++
Sbjct: 1348 KHFNPIQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFALLRNH--QKGPD-----SIMRV 1400

Query: 1772 VYVAPMKALVAEVVGNLSKRLAD-YNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIIT 1596
            VY+AP++AL  E   +  ++      + V ELTG+ +   + +E+ Q+I+ TPEKWD ++
Sbjct: 1401 VYIAPIEALAKERYRDWEQKFGKGLGLRVVELTGETATDLKLLEKAQVIIGTPEKWDALS 1460

Query: 1595 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPN 1416
            R+   R + Q V               GPVLE IVSR        +  IR+V LS +L N
Sbjct: 1461 RRWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMRYISSQVENKIRIVALSTSLAN 1520

Query: 1415 YEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCA- 1239
             +D+  ++    S GLF F    RP PL     G+ +     R Q M    Y  V+  A 
Sbjct: 1521 AKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGIDIANFEARMQAMTKPTYTAVVQHAK 1579

Query: 1238 -GKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGAS-----REILHSESEKVK 1077
             GK   LV+V +RK       H R  AL   T      G+ +S      E+L     +V 
Sbjct: 1580 VGK-PALVYVPTRK-------HARLTALDLVTYANAESGEKSSFLLQPEEVLEPFISRVS 1631

Query: 1076 NTDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTVIIKG 897
               L   L +G    H G+S +D+ +V  LF  G IQV VS++++ WG  L AH V++ G
Sbjct: 1632 EPALSAALRHGVGYIHEGLSSIDQDVVSHLFSAGCIQVCVSSSSMCWGTPLLAHLVVVMG 1691

Query: 896  TQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIE 717
            TQ Y+  + A T+    D++QM+G A RP  D+ G+ +I+      +YY   + +  P+E
Sbjct: 1692 TQYYDGRENAHTDYPITDLLQMMGHASRPLQDNSGKCVILCHAPRKEYYKKFVYESFPVE 1751

Query: 716  SQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLE 537
            S     L DNLNAE+V+G +++ ++A  +L +T++Y R+ +NP  Y L          L 
Sbjct: 1752 SHLQHFLHDNLNAEVVVGIIESKQDAVDYLTWTFMYRRLSQNPNYYNLQG---VSHRHLS 1808

Query: 536  ERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMG 357
            +  ++L+ +  + L+ +  V  +         +LG I+SYYYIS+ T+  ++  L     
Sbjct: 1809 DHLSELVENTLSNLEASKCVAIEEDMD-LSPLNLGMIASYYYISYTTIERFSSLLTAKTK 1867

Query: 356  DIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPV-KESLEEPSAKINVLLQARISQ 180
               L  + + + E+  + +R  E+  + KL++     V K    +P  K N LLQA  S+
Sbjct: 1868 LKGLIEILASASEYADLPIRPGEEEMIRKLINHQRFSVEKPRYTDPHLKANALLQAHFSR 1927

Query: 179  LKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMW 18
              + G +L +D   +  +A RLL+A+ +++   GW  LA  A++L +MV++ MW
Sbjct: 1928 HTVVG-NLAADQREVLLSANRLLQAMVDVISSNGWLVLALSAMELSQMVTQSMW 1980



 Score = 97.1 bits (240), Expect = 4e-17
 Identities = 62/136 (45%), Positives = 75/136 (55%), Gaps = 10/136 (7%)
 Frame = -3

Query: 3124 ERPKKDVKRRRGGQDESVLSITDDRVYQPRTKETRAAYEALLSTIXXXXXXXXXXXXXXX 2945
            E  ++D KRRR  ++ESVLSI++D VYQP+TK+TRAAYE LLS I               
Sbjct: 87   ETQRRDPKRRRL-EEESVLSISEDGVYQPKTKDTRAAYEILLSLIQQQFGGQPQDILRGA 145

Query: 2944 XXXXXX---------PXXXXXXXXXXXXXKPTEFAQLVSIGKLITDYHEGGD-GVNTSAS 2795
                           P              P  F  LVS+GKLITDYH+G + G+ +S  
Sbjct: 146  ADEVLSVLKNEKIKDPDKKKEIEKLLNPITPQLFTNLVSVGKLITDYHDGVETGLGSSGD 205

Query: 2794 GEALDDDIGVAVEFEE 2747
            GEALDDDIGVAVEFEE
Sbjct: 206  GEALDDDIGVAVEFEE 221


>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera]
          Length = 2177

 Score = 1427 bits (3695), Expect = 0.0
 Identities = 725/902 (80%), Positives = 793/902 (87%), Gaps = 2/902 (0%)
 Frame = -2

Query: 2702 GGIDDEDMENADEGMNLNVQDIDAYWLQRKITQAHSSAIDPQRSQQLAEEVLRILAGDGD 2523
            GGIDD+DM+ A+EGM LNVQDIDAYWLQRKI+QA+   IDPQ+ Q+LAEEVL+ILA +GD
Sbjct: 259  GGIDDDDMQEANEGMTLNVQDIDAYWLQRKISQAYEQQIDPQQCQKLAEEVLKILA-EGD 317

Query: 2522 SRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSEDQEERKRIEYEMSGDGV-LR 2346
             R+VE  L+  L F+KF LIK LLRNR KIVWCTRLAR+EDQEERK+IE EM+G G  L 
Sbjct: 318  DREVETKLLVHLQFDKFSLIKFLLRNRLKIVWCTRLARAEDQEERKKIEEEMTGSGSDLA 377

Query: 2345 AILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXXXXXXXXXG-MENSWLKGQR 2169
            AILEQLHATRATAKERQK LE+S+REEAR+L                    E+ WLKGQR
Sbjct: 378  AILEQLHATRATAKERQKILEKSIREEARRLKDESGGDGDRDRRGPVDRDAESGWLKGQR 437

Query: 2168 QLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVHXXXXXXXPLSDGEDLIKITD 1989
            QLLDL+ I+FHQGG LMANKKCELP GS+R   KGYEEVH        L  GE+L+KI+ 
Sbjct: 438  QLLDLDGIAFHQGGFLMANKKCELPTGSYRHHSKGYEEVHVPALKAAALGPGEELVKISA 497

Query: 1988 MPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRG 1809
            MP+W QPAF GM  LNRVQS+VYETALFTAEN+LLCAPTGAGKTNVA+LTILQQI LNR 
Sbjct: 498  MPDWAQPAFKGMTQLNRVQSKVYETALFTAENVLLCAPTGAGKTNVAMLTILQQIALNRN 557

Query: 1808 PDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQII 1629
             DG  + S++KIVYVAPMKALVAEVVGNLS RL  Y++ VKEL+GDQSL+RQQIEETQII
Sbjct: 558  ADGSFNHSNYKIVYVAPMKALVAEVVGNLSNRLQHYDVKVKELSGDQSLTRQQIEETQII 617

Query: 1628 VTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMI 1449
            VTTPEKWDIITRKSGDRTYTQLVK           DNRGPVLESIV+RTVRQIETT+E I
Sbjct: 618  VTTPEKWDIITRKSGDRTYTQLVKLLIVDEIHLLHDNRGPVLESIVARTVRQIETTKEHI 677

Query: 1448 RLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMND 1269
            RLVGLSATLPNYEDVALFLRVD  KGLF+FDNSYRPCPL+QQYIG+TV+KPLQRFQLMND
Sbjct: 678  RLVGLSATLPNYEDVALFLRVDLKKGLFHFDNSYRPCPLAQQYIGITVKKPLQRFQLMND 737

Query: 1268 ICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSES 1089
            +CYEKV++ AGKHQVL+FVHSRKETAKTAR IRD ALANDT+GRF+K D ASREILHS +
Sbjct: 738  VCYEKVMAVAGKHQVLIFVHSRKETAKTARAIRDTALANDTLGRFLKEDSASREILHSHT 797

Query: 1088 EKVKNTDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTV 909
            E VKN DLKD+LPYGFAIHHAGM+R DR LVE+LF DGH+QVLVSTATLAWGVNLPAHTV
Sbjct: 798  ELVKNNDLKDLLPYGFAIHHAGMARADRQLVEELFADGHVQVLVSTATLAWGVNLPAHTV 857

Query: 908  IIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQ 729
            IIKGTQIYNPEKGAWTELSPLD+MQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQ
Sbjct: 858  IIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQ 917

Query: 728  LPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKD 549
            LPIESQFVSKLAD LNAEIVLGTVQNAREAC+W+GYTYLY+RMLRNP LYGLS DAL +D
Sbjct: 918  LPIESQFVSKLADQLNAEIVLGTVQNAREACSWIGYTYLYVRMLRNPTLYGLSHDALTRD 977

Query: 548  NTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLK 369
             TLEERRADLIHSAA ILDRNNLVKYDRKSGYFQVTDLGRI+SYYYI+HGT+STYNEHLK
Sbjct: 978  ITLEERRADLIHSAAIILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLK 1037

Query: 368  PTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKESLEEPSAKINVLLQAR 189
            PTMGDIELCRLFSLSEEFKYVTVR++EKMELAKLLDRVPIP+KESLEEPSAKINVLLQA 
Sbjct: 1038 PTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQAY 1097

Query: 188  ISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQ 9
            ISQLKLEGLSL SDMVFITQ+AGRL+RALFEIVLKRGWAQL E+AL LCKMV+KRMWSVQ
Sbjct: 1098 ISQLKLEGLSLTSDMVFITQSAGRLVRALFEIVLKRGWAQLTEKALNLCKMVNKRMWSVQ 1157

Query: 8    TP 3
            TP
Sbjct: 1158 TP 1159



 Score =  293 bits (751), Expect = 2e-76
 Identities = 200/653 (30%), Positives = 329/653 (50%), Gaps = 8/653 (1%)
 Frame = -2

Query: 1952 KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKI 1773
            K+ N +Q++V+     T +N+L+ APTG+GKT  A   IL+    N     E   S  + 
Sbjct: 1356 KHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILR----NHQKGSE---SIVRA 1408

Query: 1772 VYVAPMKALVAEVVGNLSKRLA-DYNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIIT 1596
            VY+AP++AL  E   +  ++      + V ELTG+ +   + +E  Q+I++TPEKWD ++
Sbjct: 1409 VYIAPIEALAKERYRDWERKFGRGLGMRVVELTGETATDLKLLERGQVIISTPEKWDALS 1468

Query: 1595 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPN 1416
            R+   R + Q V               GPVLE IVSR        +  IR+V LS +L N
Sbjct: 1469 RRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQGENKIRIVALSTSLAN 1528

Query: 1415 YEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCA- 1239
             +D+  ++    S GLF F    RP PL     GV +     R Q M    Y  ++  A 
Sbjct: 1529 AKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAK 1587

Query: 1238 GKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGA-----SREILHSESEKVKN 1074
             +   +VFV +RK       H+R  A+   T      G+       S E L     K++ 
Sbjct: 1588 NRKPAIVFVPTRK-------HVRLTAVDLTTYSSADGGENPTFLLRSPEELEPFVGKIQE 1640

Query: 1073 TDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTVIIKGT 894
              L+  L +G    H G++ +D+ +V  LF  G IQV V +++L WGV L AH V++ GT
Sbjct: 1641 EMLRATLRHGVGYLHEGLTGMDQEVVSQLFEAGWIQVCVMSSSLCWGVPLSAHLVVVMGT 1700

Query: 893  QIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIES 714
            Q Y+  + A T+    D++QM+G A RP  D+ G+ +I+      +YY   + +  P+ES
Sbjct: 1701 QYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVES 1760

Query: 713  QFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEE 534
                 L DNLNAEIV+G ++N ++A  +L +T++Y R+ +NP  Y L          L +
Sbjct: 1761 HLQHYLHDNLNAEIVVGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLSD 1817

Query: 533  RRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGD 354
              ++ + +  + L+ +  V  +         +LG I+SYYYIS+ T+  ++  L      
Sbjct: 1818 HLSESVENTLSDLEASKCVAIEDDMD-LSPLNLGMIASYYYISYTTIERFSSSLTSKTKM 1876

Query: 353  IELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQARISQL 177
              L  + + + E+  + +R  E+  + +L++      +     +P  K N LLQA  S+ 
Sbjct: 1877 KGLLEILASASEYAQIPIRPGEEDLIRRLINHQRFSFENPKCTDPHIKANALLQAHFSR- 1935

Query: 176  KLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMW 18
            ++ G +L  D   +  +AGRLL+A+ +++   GW  LA  A+++ +MV++ MW
Sbjct: 1936 QIVGGNLALDQREVLLSAGRLLQAMVDVISSNGWLNLALLAMEVSQMVTQGMW 1988


>ref|XP_001757495.1| predicted protein [Physcomitrella patens] gi|162691189|gb|EDQ77552.1|
            predicted protein [Physcomitrella patens]
          Length = 2180

 Score = 1427 bits (3693), Expect = 0.0
 Identities = 728/905 (80%), Positives = 802/905 (88%), Gaps = 5/905 (0%)
 Frame = -2

Query: 2702 GGIDDEDMENADEGMNLNVQDIDAYWLQRKITQAHSSAIDPQRSQQLAEEVLRILAGDGD 2523
            GG DDEDME ADEG  LNVQDIDAYWLQRKI+QAH   IDPQ+SQ+LAE+VL  LA +GD
Sbjct: 258  GGQDDEDMEEADEG--LNVQDIDAYWLQRKISQAHGD-IDPQQSQKLAEDVLSKLA-EGD 313

Query: 2522 SRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSEDQEERKRIEYEMSGDG-VLR 2346
             R+VEN LV LLD++KFDLIKLLLRNR K+VWCTRLAR+ED++ RK+IE EMS  G VL 
Sbjct: 314  DREVENRLVILLDYDKFDLIKLLLRNRLKVVWCTRLARAEDEDARKKIEEEMSNGGPVLA 373

Query: 2345 AILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXXXXXXXXXGM----ENSWLK 2178
             ILEQLHATRATAKERQKNLERS+REEA+KL                       E+ WLK
Sbjct: 374  GILEQLHATRATAKERQKNLERSIREEAKKLRDDGGEAADRGRRKDREVGVGGGESGWLK 433

Query: 2177 GQRQLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVHXXXXXXXPLSDGEDLIK 1998
            GQRQLLDLE ++FHQGGLLMANK+CELP  S+R+ +KGYEEVH       P ++GE+L+K
Sbjct: 434  GQRQLLDLEQLTFHQGGLLMANKRCELPPLSYRTPKKGYEEVHVPHLKPKPFAEGEELVK 493

Query: 1997 ITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGL 1818
            I+DMP+W QPAF GMK+LNRVQS+VYETALFT+ENLLLCAPTGAGKTNVA+LTIL ++GL
Sbjct: 494  ISDMPDWAQPAFKGMKSLNRVQSKVYETALFTSENLLLCAPTGAGKTNVAMLTILHELGL 553

Query: 1817 NRGPDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEET 1638
             +  DG  DLSSFKIVYVAPMKALVAE+VGN S+RL  Y +TV+ELTGD +LSR QIEET
Sbjct: 554  RKQLDGTFDLSSFKIVYVAPMKALVAEMVGNFSERLEPYGVTVRELTGDATLSRGQIEET 613

Query: 1637 QIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQ 1458
            QIIVTTPEKWDIITRKSGDRTYTQ+VK           DNRGPVLESIV+RTVRQIETTQ
Sbjct: 614  QIIVTTPEKWDIITRKSGDRTYTQMVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTQ 673

Query: 1457 EMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQL 1278
            EMIRLVGLSATLPNYEDVALFL+VD+ KGLFYFDNSYRPCPL+QQYIGVTVRKPLQRFQL
Sbjct: 674  EMIRLVGLSATLPNYEDVALFLKVDEKKGLFYFDNSYRPCPLAQQYIGVTVRKPLQRFQL 733

Query: 1277 MNDICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILH 1098
            MNDICYEKV+  AGKHQVL+FVHSRKETAKTAR IRDAALANDT+GRF+K DGASREIL 
Sbjct: 734  MNDICYEKVMEVAGKHQVLIFVHSRKETAKTARAIRDAALANDTLGRFLKEDGASREILQ 793

Query: 1097 SESEKVKNTDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPA 918
             E++ VKN DLK++LPYGFAIHHAGM R DRTLVEDLFGDGHIQVLVSTATLAWGVNLPA
Sbjct: 794  KENDVVKNNDLKNLLPYGFAIHHAGMGRADRTLVEDLFGDGHIQVLVSTATLAWGVNLPA 853

Query: 917  HTVIIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLM 738
            HTVIIKGTQIYNPEKGAWTELSPLD+MQMLGRAGRPQ+D+YGEGIIITGHSELQYYLSLM
Sbjct: 854  HTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDTYGEGIIITGHSELQYYLSLM 913

Query: 737  NQQLPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADAL 558
            NQQLPIESQ++SKLADNLNAEIVLG+VQ+AREAC WLGYTYLYIRML+NP LYG+S +AL
Sbjct: 914  NQQLPIESQYISKLADNLNAEIVLGSVQDAREACDWLGYTYLYIRMLKNPTLYGVSREAL 973

Query: 557  EKDNTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNE 378
            E D +LEERRADL+HSAA +LDRNNLVKYDRKSGYFQVTDLGRI+SYYYISHG+M+TYNE
Sbjct: 974  EADPSLEERRADLVHSAAIVLDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGSMATYNE 1033

Query: 377  HLKPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKESLEEPSAKINVLL 198
            HLKPTMGDIELCRLFSLSEEFK+VTVREEEKMELAKLLDRVPIPVKESLEEPSAKINVLL
Sbjct: 1034 HLKPTMGDIELCRLFSLSEEFKFVTVREEEKMELAKLLDRVPIPVKESLEEPSAKINVLL 1093

Query: 197  QARISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMW 18
            QA ISQLKLEGLSL SDMVFITQ+AGRL+RALFEIVLKRGWAQLAE+AL LCKMVS+RMW
Sbjct: 1094 QAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQLAEKALTLCKMVSRRMW 1153

Query: 17   SVQTP 3
            S QTP
Sbjct: 1154 SSQTP 1158



 Score =  294 bits (752), Expect = 2e-76
 Identities = 199/654 (30%), Positives = 333/654 (50%), Gaps = 9/654 (1%)
 Frame = -2

Query: 1952 KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKI 1773
            ++ N +Q++V+     T +N+L+ APTG+GKT  A   +L+   L +G  G       + 
Sbjct: 1355 RHFNPIQTQVFPVLYNTDDNVLVAAPTGSGKTICAEFAVLRM--LQKGEAGG------RC 1406

Query: 1772 VYVAPMKALVAEVVGNLSKRLA-DYNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIIT 1596
            VY+AP++AL  E + +   +      + V ELTG+ +   + +E+ QII++TPE+WD+++
Sbjct: 1407 VYIAPVEALAKERLRDWESKFGRTLGVRVVELTGETATDMKLLEKGQIIISTPERWDVLS 1466

Query: 1595 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPN 1416
            R+   R + Q V               GPVLE IVSR       T+  IR+V LS +L N
Sbjct: 1467 RRWKQRKHVQQVSLFVVDELHLIGGEGGPVLEVIVSRMRYIGSQTENQIRIVALSTSLAN 1526

Query: 1415 YEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAG 1236
             +D+  ++    S GLF F    RP PL     GV +     R Q M    Y  ++    
Sbjct: 1527 AKDLGDWIGAS-SHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVHHVK 1585

Query: 1235 KHQ-VLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESE------KVK 1077
            K +  L+FV +RK    TA  +   A  N        G+G S  +  +E++      KVK
Sbjct: 1586 KQEPALIFVPTRKHARLTALDLVTYATVN--------GNGKSPFLHCAEADLAPFLSKVK 1637

Query: 1076 NTDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTVIIKG 897
            +  L   L  G    H G+S +++ +V  L     IQV V+T+++ WG+ L AH V++ G
Sbjct: 1638 DEALIHALLQGIGYLHEGLSAIEQEVVTSLLTAEAIQVCVATSSMCWGMTLSAHLVVVMG 1697

Query: 896  TQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIE 717
            TQ Y+  + A T+    D++QM+GRA RPQ D+ G+ +I+      +YY   + +  P+E
Sbjct: 1698 TQFYDGRENAHTDYPITDLLQMMGRASRPQVDTSGKCVILCHAPRKEYYKKFLYEPFPVE 1757

Query: 716  SQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLE 537
            S     L D+LNAE+V+ T++N ++A  +L +T++Y R+ +NP  Y L          L 
Sbjct: 1758 SHLDHYLHDHLNAEVVVRTIENKQDAVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLS 1814

Query: 536  ERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMG 357
            +  ++L+ S  + L+ +  V  +         +LG I++YYYIS+ T+  ++  L     
Sbjct: 1815 DHLSELVESTLSDLESSKCVAIEDDMD-LSPLNLGMIAAYYYISYTTIELFSSSLTAKTK 1873

Query: 356  DIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPV-KESLEEPSAKINVLLQARISQ 180
               L  + S + E+  + +R  E   + KL+      + K    +P  K N LLQA  ++
Sbjct: 1874 LKGLLEILSNASEYTRLPMRPGEDELIRKLVMHQRFSMDKPKFTDPHVKANALLQAHFAR 1933

Query: 179  LKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMW 18
              + G +L  D   I  +A RL++A+ +++   GW   A  A++L +MV++ +W
Sbjct: 1934 HSVSG-NLALDQRDILIDASRLIQAMVDVISSSGWLHPALAAMELSQMVTQGLW 1986



 Score = 98.2 bits (243), Expect = 2e-17
 Identities = 64/132 (48%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
 Frame = -3

Query: 3115 KKDVKRRRGGQDESVLSITDDRVYQPRTKETRAAYEALLSTIXXXXXXXXXXXXXXXXXX 2936
            KK  KR RG Q+ESVLSI DD +Y+P+TKETRAAYEALLSTI                  
Sbjct: 93   KKARKRLRGMQEESVLSIVDDGMYRPKTKETRAAYEALLSTIQQQFGDQPQDILRGAADE 152

Query: 2935 XXXPXXXXXXXXXXXXXKPTE---------FAQLVSIGKLITDYHEGGDGVNTSASGEAL 2783
                             +  +         FAQLV+IGKLI+DY EGGD      +GEAL
Sbjct: 153  VLGVLKNDRFRDLDKKKEIEKLLNSMSNERFAQLVAIGKLISDYSEGGD-AGAEGAGEAL 211

Query: 2782 DDDIGVAVEFEE 2747
            DDDIGVAVEFEE
Sbjct: 212  DDDIGVAVEFEE 223


>ref|XP_006598183.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            isoform X1 [Glycine max]
          Length = 2183

 Score = 1402 bits (3630), Expect = 0.0
 Identities = 713/907 (78%), Positives = 788/907 (86%), Gaps = 7/907 (0%)
 Frame = -2

Query: 2702 GGIDDEDMENADEGMNLNVQDIDAYWLQRKITQAHSSAIDPQRSQQLAEEVLRILAGDGD 2523
            GGIDDEDME  +EGM LNVQDIDAYWLQRKI+QA    IDPQ  Q+LAEEVL+ILA +GD
Sbjct: 260  GGIDDEDMEEGNEGMGLNVQDIDAYWLQRKISQAFEQQIDPQHCQKLAEEVLKILA-EGD 318

Query: 2522 SRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSEDQEERKRIEYEMSGDGVLRA 2343
             R+VEN L+  L+F+KF LIK LLRNR KIVWCTRLAR++DQEER+RIE EM G   L+ 
Sbjct: 319  DREVENKLLFHLEFDKFSLIKFLLRNRLKIVWCTRLARAQDQEERERIEEEMKGTE-LQP 377

Query: 2342 ILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXXXXXXXXXGM------ENSWL 2181
            ILEQLHATRA+AKERQKNLE+S+REEAR+L                  +      E+ WL
Sbjct: 378  ILEQLHATRASAKERQKNLEKSIREEARRLKDDTGGDGDKESRDRSRRVVADRDGESGWL 437

Query: 2180 KGQRQLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVHXXXXXXXPLSDGEDLI 2001
            KGQRQ+LDL+SI+F QGG  MA KKC+LP GS+R   KGYEE+H       PL   E L+
Sbjct: 438  KGQRQMLDLDSIAFAQGGFFMAKKKCDLPDGSYRHLSKGYEEIHVPALKAKPLDPNEKLV 497

Query: 2000 KITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIG 1821
            KI+ MP+W QPAF GM  LNRVQS+VYETALF  +NLLLCAPTGAGKTNVAVLTILQQI 
Sbjct: 498  KISSMPDWAQPAFKGMTQLNRVQSKVYETALFQPDNLLLCAPTGAGKTNVAVLTILQQIA 557

Query: 1820 LNRGP-DGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIE 1644
             +R P DG +D S++KIVYVAPMKALVAEVVGNLS RL DY++ V+EL+GDQSL+RQQIE
Sbjct: 558  RHRNPKDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLQDYDVKVRELSGDQSLTRQQIE 617

Query: 1643 ETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIET 1464
            ETQIIVTTPEKWDIITRKSGDRTYTQLVK           DNRGPVLESIV+RTVRQIET
Sbjct: 618  ETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIET 677

Query: 1463 TQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRF 1284
            T++ IRLVGLSATLPNYEDVALFLRVD  KGLFYFDNSYRP PLSQQY+G+TV+KPLQRF
Sbjct: 678  TKDYIRLVGLSATLPNYEDVALFLRVDLKKGLFYFDNSYRPVPLSQQYVGITVKKPLQRF 737

Query: 1283 QLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREI 1104
            QLMNDICYEKV++ AGKHQVL+FVHSRKETAKTAR IRD ALANDT+GRF+K D ASREI
Sbjct: 738  QLMNDICYEKVMAVAGKHQVLIFVHSRKETAKTARAIRDTALANDTLGRFLKEDSASREI 797

Query: 1103 LHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNL 924
            LH+ ++ VK+ DLKD+LPYGFAIHHAGM+R DR LVEDLF DGH+QVLVSTATLAWGVNL
Sbjct: 798  LHTHTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAWGVNL 857

Query: 923  PAHTVIIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLS 744
            PAHTVIIKGTQIYNPEKGAWTELSPLD+MQMLGRAGRPQYDSYGEGII+TGHSELQYYLS
Sbjct: 858  PAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIVTGHSELQYYLS 917

Query: 743  LMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSAD 564
            LMNQQLPIESQFVSKLAD LNAEIVLGTVQNAREAC W+GYTYLY+RMLRNP LYG++ D
Sbjct: 918  LMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWIGYTYLYVRMLRNPSLYGIAPD 977

Query: 563  ALEKDNTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTY 384
             L +D TLEERRADLIH+AATILDRNNLVKYDRKSGYFQVTDLGRI+SYYYI+HG++STY
Sbjct: 978  VLTRDITLEERRADLIHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGSISTY 1037

Query: 383  NEHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKESLEEPSAKINV 204
            NEHLKPTMGDIELCRLFSLSEEFKYVTVR++EKMELAKLLDRVPIP+KESLEEPSAKINV
Sbjct: 1038 NEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINV 1097

Query: 203  LLQARISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKR 24
            LLQA ISQLKLEGLSL SDMVFITQ+AGRLLRALFEIVLKRGWAQLAE+AL LCKMV+KR
Sbjct: 1098 LLQAYISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVTKR 1157

Query: 23   MWSVQTP 3
            MWSVQTP
Sbjct: 1158 MWSVQTP 1164



 Score =  295 bits (755), Expect = 8e-77
 Identities = 199/648 (30%), Positives = 330/648 (50%), Gaps = 3/648 (0%)
 Frame = -2

Query: 1952 KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKI 1773
            K+ N VQ++V+     + +N+L+ APTG+GKT  A   IL+     + PD     S  ++
Sbjct: 1361 KHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNH--QKWPD-----SVMRV 1413

Query: 1772 VYVAPMKALVAEVVGNLSKRLAD-YNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIIT 1596
            VYVAP+++L  E   +  K+      + V ELTG+ +   + +E+ QII++TPEKWD ++
Sbjct: 1414 VYVAPIESLAKERYRDWEKKFGGGLKLRVVELTGETATDLKLLEKGQIIISTPEKWDALS 1473

Query: 1595 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPN 1416
            R+   R + Q V               GP+LE +VSR        +  IR+V LS +L N
Sbjct: 1474 RRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVVVSRMRYIASQVENKIRVVALSTSLAN 1533

Query: 1415 YEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAG 1236
             +D+  ++    S GLF F    RP PL     G+ +     R Q M    Y  ++  A 
Sbjct: 1534 AKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGIDIANFEARMQAMTKPTYTAIVQHAK 1592

Query: 1235 KHQ-VLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTDLKD 1059
              +  LVFV +RK    TA  +   + A+     F+     S E L    +K+ +  LK 
Sbjct: 1593 NGKPALVFVPTRKHVRLTAVDLITYSGADSGEKPFLL---RSAEELEPFLDKITDEMLKV 1649

Query: 1058 MLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNP 879
             L  G    H G++ +DR +V  LF  G IQV V  +++ WGV L AH V++ GTQ Y+ 
Sbjct: 1650 TLREGVGYLHEGLNSLDRDIVTQLFEAGWIQVCVLNSSMCWGVTLSAHLVVVMGTQYYDG 1709

Query: 878  EKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSK 699
             + A T+    D++QM+G A RP  D+ G+ +I+      +YY   + +  P+ES     
Sbjct: 1710 RENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHF 1769

Query: 698  LADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERRADL 519
            L DNLNAEIV G ++N ++A  +L +T++Y R+ +NP  Y L          L +  +++
Sbjct: 1770 LHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLSDHLSEM 1826

Query: 518  IHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCR 339
            + +  + L+    +  +       + +LG I+SYYYIS+ T+  ++  +        L  
Sbjct: 1827 VENTLSDLEAGKCITIEDDMELAPL-NLGMIASYYYISYTTIERFSSSVTSKTKMKGLLE 1885

Query: 338  LFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQARISQLKLEGL 162
            + S + E+  + +R  E+  + KL++      +   + +P  K N LLQA  S+ +  G 
Sbjct: 1886 ILSSASEYAQLPIRPGEEEVVRKLINHQRFSFENPKVTDPHVKTNALLQAHFSR-QFVGG 1944

Query: 161  SLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMW 18
            +L  D   +  +A RLL+A+ +++   GW  LA  A+++ +MV++ MW
Sbjct: 1945 NLALDQKEVLLSANRLLQAMVDVISSNGWLGLALLAMEVSQMVTQGMW 1992


>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score = 1397 bits (3616), Expect = 0.0
 Identities = 711/907 (78%), Positives = 787/907 (86%), Gaps = 7/907 (0%)
 Frame = -2

Query: 2702 GGIDDEDMENADEGMNLNVQDIDAYWLQRKITQAHSSAIDPQRSQQLAEEVLRILAGDGD 2523
            GGIDDEDME  +EGM LNVQDIDAYWLQRKI+QA    IDPQ  Q+LAEEVL+ILA +GD
Sbjct: 260  GGIDDEDMEEGNEGMGLNVQDIDAYWLQRKISQAFEQQIDPQHCQKLAEEVLKILA-EGD 318

Query: 2522 SRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSEDQEERKRIEYEMSGDGVLRA 2343
             R+VEN L+  L+F+KF LIK LLRNR KIVWCTRLAR++DQEER++IE EM G   L+ 
Sbjct: 319  DREVENKLLFHLEFDKFSLIKFLLRNRLKIVWCTRLARAQDQEEREKIEEEMKGTE-LQP 377

Query: 2342 ILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXXXXXXXXXGM------ENSWL 2181
            ILEQLHATRA+AKERQKNLE+S+REEAR+L                         E+ WL
Sbjct: 378  ILEQLHATRASAKERQKNLEKSIREEARRLKDDTGGDGDKESRDRSRRGVADRDGESGWL 437

Query: 2180 KGQRQLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVHXXXXXXXPLSDGEDLI 2001
            KGQRQ+LDL+SI+F QGG  MA KKC+LP GS+R   KGYEE+H       PL   E L+
Sbjct: 438  KGQRQMLDLDSIAFTQGGFFMAKKKCDLPDGSYRHLSKGYEEIHVPALKAKPLDPNEKLV 497

Query: 2000 KITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIG 1821
            KI+ MP+W QPAF GM  LNRVQS+VYETALF  +NLLLCAPTGAGKTNVAVLTILQQI 
Sbjct: 498  KISSMPDWAQPAFKGMTQLNRVQSKVYETALFKPDNLLLCAPTGAGKTNVAVLTILQQIA 557

Query: 1820 LNRGP-DGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIE 1644
             +R P DG +D S++KIVYVAPMKALVAEVVGNLS RL +Y++ V+EL+GDQSL+RQQIE
Sbjct: 558  RHRNPEDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLQEYDVKVRELSGDQSLTRQQIE 617

Query: 1643 ETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIET 1464
            ETQIIVTTPEKWDIITRKSGDRTYTQLVK           DNRGPVLESIV+RTVRQIET
Sbjct: 618  ETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIET 677

Query: 1463 TQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRF 1284
            T++ IRLVGLSATLPNYEDVALFLRVD  KGLFYFDNSYRP PLSQQY+G+TV+KPLQRF
Sbjct: 678  TKDYIRLVGLSATLPNYEDVALFLRVDLKKGLFYFDNSYRPVPLSQQYVGITVKKPLQRF 737

Query: 1283 QLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREI 1104
            QLMNDICYEKV++ AGKHQVL+FVHSRKETAKTAR IRDAALANDT+GRF+K D ASREI
Sbjct: 738  QLMNDICYEKVMAVAGKHQVLIFVHSRKETAKTARAIRDAALANDTLGRFLKEDSASREI 797

Query: 1103 LHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNL 924
            LH+ ++ VK+ DLKD+LPYGFAIHHAGM+R DR LVEDLF DGH+QVLVSTATLAWGVNL
Sbjct: 798  LHTHTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAWGVNL 857

Query: 923  PAHTVIIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLS 744
            PAHTVIIKGTQIYNPEKGAWTELSPLD+MQMLGRAGRPQYDSYGEGII+TGHSELQYYLS
Sbjct: 858  PAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIVTGHSELQYYLS 917

Query: 743  LMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSAD 564
            LMNQQLPIESQFVSKLAD LNAEIVLGTVQNAREAC W+GYTYLY+RMLRNP LYG++ D
Sbjct: 918  LMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWIGYTYLYVRMLRNPSLYGIAPD 977

Query: 563  ALEKDNTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTY 384
             L +D TLEERRADLIH+AATILDRNNLVKYDRKSGYFQVTDLGRI+SYYYI+HG++STY
Sbjct: 978  VLTRDITLEERRADLIHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGSISTY 1037

Query: 383  NEHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKESLEEPSAKINV 204
            NEHLKPTMGDIELCRLFSLSEEFKYVTVR++EKMELAKLLDRVPIP+KESLEEPSAKINV
Sbjct: 1038 NEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINV 1097

Query: 203  LLQARISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKR 24
            LLQA ISQLKLEGLSL SDMVFITQ+AGRLLRALFEIVLKRGWAQLAE+AL LCKM +KR
Sbjct: 1098 LLQAYISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMGTKR 1157

Query: 23   MWSVQTP 3
            MWSVQTP
Sbjct: 1158 MWSVQTP 1164



 Score =  293 bits (751), Expect = 2e-76
 Identities = 197/648 (30%), Positives = 329/648 (50%), Gaps = 3/648 (0%)
 Frame = -2

Query: 1952 KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKI 1773
            K+ N VQ++V+     + +N+L+ APTG+GKT  A   IL+     +GPD     S  ++
Sbjct: 1361 KHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNH--QKGPD-----SVMRV 1413

Query: 1772 VYVAPMKALVAEVVGNLSKRLAD-YNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIIT 1596
            VYVAP++AL  E   +  ++      + V ELTG+ +   + +E+ QII++TPEKWD ++
Sbjct: 1414 VYVAPVEALAKERYRDWERKFGGGLKLRVVELTGETATDLKLLEKGQIIISTPEKWDALS 1473

Query: 1595 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPN 1416
            R+   R + Q V               GP+LE +VSR        +   R+V LS +L N
Sbjct: 1474 RRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVVVSRMRYIASQVENKSRIVALSTSLAN 1533

Query: 1415 YEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAG 1236
             +D+  ++    S GLF F    RP PL     G+ +     R Q M    Y  ++  A 
Sbjct: 1534 AKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGIDITNFEARMQAMTKPTYTAIVQHAK 1592

Query: 1235 KHQ-VLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTDLKD 1059
              +  L+FV +RK    TA  +   + A+     F+     S E L    +K+ +  LK 
Sbjct: 1593 NGKPALIFVPTRKHVRLTAVDMITYSGADSGEKPFLL---RSAEELEPFLDKITDEMLKV 1649

Query: 1058 MLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNP 879
             L  G    H G++ +D  +V  LF  G IQV V  +++ WGV L AH V++ GTQ Y+ 
Sbjct: 1650 TLREGVGYLHEGLNSLDHDIVTQLFEAGWIQVCVLNSSMCWGVTLLAHLVVVMGTQYYDG 1709

Query: 878  EKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSK 699
             + A T+    D++QM+G A RP  D+ G+ +I+      +YY   + +  P+ES     
Sbjct: 1710 RENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHF 1769

Query: 698  LADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERRADL 519
            L DNLNAEIV G ++N ++A  +L +T++Y R+ +NP  Y L          L +  +++
Sbjct: 1770 LHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLSDHLSEM 1826

Query: 518  IHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCR 339
            + +  + L+    +  +       + +LG I+SYYYIS+ T+  ++  +        L  
Sbjct: 1827 VENTLSDLEAGKCITIEDDMELAPL-NLGMIASYYYISYTTIERFSSSVTSKTKMKGLLE 1885

Query: 338  LFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQARISQLKLEGL 162
            + S + E+  + +R  E+  + KL++      +   + +P  K N LLQA  S+ +  G 
Sbjct: 1886 ILSSASEYAQLPIRPGEEEVVRKLINHQRFSFENPKVTDPHVKANALLQAHFSR-QFVGG 1944

Query: 161  SLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMW 18
            +L  D   +  +A RLL+A+ +++   GW  LA  A+++ +MV++ MW
Sbjct: 1945 NLALDQKEVLLSANRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGMW 1992


>ref|XP_006648214.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Oryza brachyantha]
          Length = 2203

 Score = 1390 bits (3599), Expect = 0.0
 Identities = 698/902 (77%), Positives = 798/902 (88%), Gaps = 2/902 (0%)
 Frame = -2

Query: 2702 GGIDDEDMENADEGMNLNVQDIDAYWLQRKITQAHSSAIDPQRSQQLAEEVLRILAGDGD 2523
            G +DD+DM+N++EGM +NVQDIDAYWLQRK++QA+   IDPQ SQ+LAEE+L+I+A +GD
Sbjct: 292  GELDDDDMQNSNEGMTINVQDIDAYWLQRKVSQAYED-IDPQHSQKLAEEILKIIA-EGD 349

Query: 2522 SRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSEDQEERKRIEYEMSGDGVLRA 2343
             RDVEN LV LLD+EKFDLIKLLLRNR KIVWCTRLAR+EDQE+RK+IE +M  +  L  
Sbjct: 350  DRDVENRLVMLLDYEKFDLIKLLLRNRLKIVWCTRLARAEDQEQRKKIEEDMMANPTLTP 409

Query: 2342 ILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXXXXXXXXXG--MENSWLKGQR 2169
            ILEQLHATRA+AKERQKNLE+S+R+EA++L                    ME+ WLKGQR
Sbjct: 410  ILEQLHATRASAKERQKNLEKSIRDEAKRLTKSENAGIDGARDRRAVDRDMESGWLKGQR 469

Query: 2168 QLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVHXXXXXXXPLSDGEDLIKITD 1989
            QLLDL+S+SFHQGGLLMANKKCELP GSFR+  KGYEEVH       P   GE ++KI+D
Sbjct: 470  QLLDLDSLSFHQGGLLMANKKCELPPGSFRTPHKGYEEVHVPALKAKPYEAGEKIVKISD 529

Query: 1988 MPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRG 1809
            MPEW QPAF GM  LNRVQS+VY+TALF  +N+LLCAPTGAGKTNVAVLTILQQIGL+  
Sbjct: 530  MPEWAQPAFAGMTQLNRVQSKVYDTALFKPDNILLCAPTGAGKTNVAVLTILQQIGLHM- 588

Query: 1808 PDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQII 1629
             DGE D + +KIVYVAPMKALVAEVVGNLS RL++Y +TV+EL+GDQ+L++QQI++TQII
Sbjct: 589  KDGEFDNTKYKIVYVAPMKALVAEVVGNLSARLSEYKVTVRELSGDQNLTKQQIDDTQII 648

Query: 1628 VTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMI 1449
            VTTPEKWDI+TRKSGDRTYTQ+VK           DNRGPVLESIVSRTVRQIETT+E I
Sbjct: 649  VTTPEKWDIVTRKSGDRTYTQMVKLLIIDEIHLLHDNRGPVLESIVSRTVRQIETTKEHI 708

Query: 1448 RLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMND 1269
            RLVGLSATLPNYEDVA+FLRV +S GLF+FDNSYRPCPL+QQYIG+TVRKPLQRFQLMN+
Sbjct: 709  RLVGLSATLPNYEDVAVFLRV-RSDGLFHFDNSYRPCPLAQQYIGITVRKPLQRFQLMNE 767

Query: 1268 ICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSES 1089
            ICYEKV++ AGKHQVL+FVHSRKETAKTAR IRD ALANDT+ RF+K + AS+EIL S++
Sbjct: 768  ICYEKVIASAGKHQVLIFVHSRKETAKTARAIRDTALANDTLNRFLKDESASQEILGSQA 827

Query: 1088 EKVKNTDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTV 909
            + VK++DLKD+LPYGFAIHHAG++RVDR LVE+LF D HIQVLVSTATLAWGVNLPAHTV
Sbjct: 828  DLVKSSDLKDLLPYGFAIHHAGLARVDRELVEELFADKHIQVLVSTATLAWGVNLPAHTV 887

Query: 908  IIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQ 729
            IIKGTQIYNPEKGAWTELSPLD+MQMLGRAGRPQYD++GEGIIITGHSELQYYLSLMNQQ
Sbjct: 888  IIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTHGEGIIITGHSELQYYLSLMNQQ 947

Query: 728  LPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKD 549
            LPIESQF+SKLAD LNAEIVLGT+QNAREAC+WLGYTYLYIRMLRNP LYGL AD +E D
Sbjct: 948  LPIESQFISKLADQLNAEIVLGTIQNAREACSWLGYTYLYIRMLRNPTLYGLPADIMETD 1007

Query: 548  NTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLK 369
             TL+ERRADL+HSAA +LDRNNL+KYDRK+GYFQVTDLGRI+SYYYISHGT+STYNE+LK
Sbjct: 1008 KTLDERRADLVHSAANLLDRNNLIKYDRKTGYFQVTDLGRIASYYYISHGTISTYNEYLK 1067

Query: 368  PTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKESLEEPSAKINVLLQAR 189
            PTMGDIELCRLFSLSEEFKYV+VR++EKMELAKLLDRVPIPVKESLEEPSAKINVLLQA 
Sbjct: 1068 PTMGDIELCRLFSLSEEFKYVSVRQDEKMELAKLLDRVPIPVKESLEEPSAKINVLLQAY 1127

Query: 188  ISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQ 9
            IS+LKLEGLSL SDMV+I Q+AGRLLRALFEI+LKRGWAQLAE+AL LCKMV K+MW+VQ
Sbjct: 1128 ISRLKLEGLSLSSDMVYIRQSAGRLLRALFEIILKRGWAQLAEKALNLCKMVDKQMWNVQ 1187

Query: 8    TP 3
            TP
Sbjct: 1188 TP 1189



 Score =  301 bits (770), Expect = 2e-78
 Identities = 201/651 (30%), Positives = 337/651 (51%), Gaps = 2/651 (0%)
 Frame = -2

Query: 1964 FGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLS 1785
            +   K+ N +Q++V+     T +++L+ APTG+GKT  A   IL+     +   GE   S
Sbjct: 1382 YSAFKHFNPIQTQVFTVLYNTDDSVLVAAPTGSGKTICAEFAILRNH--QKAVSGE---S 1436

Query: 1784 SFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQIIVTTPEKWD 1605
            + ++VY+AP++AL  E   +  ++  ++   V ELTG+ +   + +++ +II++TPEKWD
Sbjct: 1437 NMRVVYIAPIEALAKERYRDWERKFREF-ARVVELTGETAADLKLLDKGEIIISTPEKWD 1495

Query: 1604 IITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSAT 1425
             ++R+   R   Q V              +G VLE  VSR  R        IR+V LSA+
Sbjct: 1496 ALSRRWKQRKQVQQVSLFIVDELHLIASEKGHVLEVTVSRMRRIASHIGSNIRIVALSAS 1555

Query: 1424 LPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLS 1245
            L N +D+  ++    S GLF F  + RP PL     GV +     R Q M    Y  +  
Sbjct: 1556 LANAKDLGEWIGAT-SHGLFNFPPAVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAITQ 1614

Query: 1244 CAGKHQ-VLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTD 1068
             A   +  LVFV +RK    TA  +   + A      F+ G   S + + + +  V +  
Sbjct: 1615 HAKNGKPALVFVPTRKHARLTALDLCAYSSAEGGGTPFLLG---SEDEMETFTGSVSDET 1671

Query: 1067 LKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTVIIKGTQI 888
            LK  L  G    H G+S +D+ +V  LF  G IQV V+++T+ WG +LPAH V++ GTQ 
Sbjct: 1672 LKYTLKCGVGYLHEGLSDLDQEVVTQLFLGGRIQVCVASSTVCWGRSLPAHLVVVMGTQY 1731

Query: 887  YNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQF 708
            Y+  + A T+    D++QM+G A RP  D+ G+ +I+      +YY   + +  P+ES  
Sbjct: 1732 YDGRENAHTDYPIADLLQMMGHASRPLQDNSGKCVILCHAPRKEYYKKFLFEAFPVESHL 1791

Query: 707  VSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERR 528
               L D++NAE+V+G ++N ++A  +L +T++Y R+ +NP  Y L          L +  
Sbjct: 1792 HHFLHDHMNAEVVVGVIENKQDAVDYLTWTFMYRRLTKNPNYYNLQG---VSHRHLSDHL 1848

Query: 527  ADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIE 348
            ++L+ +    L+ +  V  + +  Y +  +LG I+SYYYIS+ T+  ++  L        
Sbjct: 1849 SELVETVLNDLESSKCVAIE-EDMYLKALNLGLIASYYYISYTTIERFSSMLTQKTKMKG 1907

Query: 347  LCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPV-KESLEEPSAKINVLLQARISQLKL 171
            L  + + + E+  +  R  E+  + KL+      + K    +P  K N LLQA  S+  +
Sbjct: 1908 LLEILASASEYAELPSRPGEENFIEKLVRHQRFSIEKPKYGDPHVKANALLQAHFSRHTI 1967

Query: 170  EGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMW 18
             G +L +D   I  +A RLL+A+ +++   GW  LA  A++L +MV++ MW
Sbjct: 1968 VG-NLAADQREILLSAHRLLQAMVDVISSNGWLTLALNAMELSQMVTQGMW 2017


>gb|ESW21254.1| hypothetical protein PHAVU_005G055300g [Phaseolus vulgaris]
            gi|561022525|gb|ESW21255.1| hypothetical protein
            PHAVU_005G055300g [Phaseolus vulgaris]
          Length = 2184

 Score = 1390 bits (3599), Expect = 0.0
 Identities = 707/906 (78%), Positives = 787/906 (86%), Gaps = 6/906 (0%)
 Frame = -2

Query: 2702 GGIDDEDMENADEGMNLNVQDIDAYWLQRKITQAHSSAIDPQRSQQLAEEVLRILAGDGD 2523
            GGIDDEDME+ +EGM+LNVQDIDAYWLQRKI+ A    IDPQ+ Q+LAEEVL+ILA +GD
Sbjct: 261  GGIDDEDMEDGNEGMSLNVQDIDAYWLQRKISLAFEQQIDPQQCQKLAEEVLKILA-EGD 319

Query: 2522 SRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSEDQEERKRIEYEMSGDGVLRA 2343
             R+VE+ L+  L+F+KF LIK LLRNR KIVWCTRLAR++DQEER+RIE EM G   L+ 
Sbjct: 320  DREVESKLLFHLEFDKFSLIKFLLRNRLKIVWCTRLARAQDQEERERIEEEMKGTE-LQP 378

Query: 2342 ILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXXXXXXXXXGM-----ENSWLK 2178
            ILEQLHATRA+AKERQKNLE+S+REEAR+L                 G      E+ WLK
Sbjct: 379  ILEQLHATRASAKERQKNLEKSIREEARRLKDDTGGDGDKERERGRRGPADRDGESGWLK 438

Query: 2177 GQRQLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVHXXXXXXXPLSDGEDLIK 1998
            GQRQ+LDLE+I+F QGG  MA KKC+LP GS+R   KGYEE+H        L   E L+K
Sbjct: 439  GQRQMLDLENIAFAQGGFFMAKKKCDLPDGSYRHLSKGYEEIHVPALKAKALDPNEKLVK 498

Query: 1997 ITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGL 1818
            I+ MP+W QPAF GM  LNRVQS+VY+TALF  +NLLLCAPTGAGKTNVAVLTILQQI  
Sbjct: 499  ISSMPDWAQPAFKGMSQLNRVQSKVYDTALFKPDNLLLCAPTGAGKTNVAVLTILQQIAR 558

Query: 1817 NRGP-DGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEE 1641
            +R P DG +D S++KIVYVAPMKALVAEVVGNLS RL +Y++ V+EL+GDQSL+RQQIEE
Sbjct: 559  HRNPEDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLQEYDVKVRELSGDQSLTRQQIEE 618

Query: 1640 TQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETT 1461
            TQIIVTTPEKWDIITRKSGDRTYTQLVK           DNRGPVLESIV+RTVRQIETT
Sbjct: 619  TQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETT 678

Query: 1460 QEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQ 1281
            ++ IRLVGLSATLPNYEDVALFLRVD  KGLFYFDNSYRP PLSQQY+G+TV+KPLQRFQ
Sbjct: 679  KDYIRLVGLSATLPNYEDVALFLRVDLKKGLFYFDNSYRPVPLSQQYVGITVKKPLQRFQ 738

Query: 1280 LMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREIL 1101
            LMNDICYEKV++ AGKHQVL+FVHSRKETAKTAR IRDAAL  DT+GRF+K D ASREIL
Sbjct: 739  LMNDICYEKVMAVAGKHQVLIFVHSRKETAKTARAIRDAALGKDTLGRFLKEDSASREIL 798

Query: 1100 HSESEKVKNTDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLP 921
             + ++ VK+ DLKD+LPYGFAIHHAGM+R DR LVEDLF DGH+QVLVSTATLAWGVNLP
Sbjct: 799  QTHTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAWGVNLP 858

Query: 920  AHTVIIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSL 741
            AHTVIIKGTQIYNPEKGAWTELSPLD+MQMLGRAGRPQYDSYGEGII+TGHSELQYYLSL
Sbjct: 859  AHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIVTGHSELQYYLSL 918

Query: 740  MNQQLPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADA 561
            MNQQLPIESQFVSKLAD LNAEIVLGTVQNAREAC W+GYTYLY+RMLRNP LYG++ D 
Sbjct: 919  MNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWIGYTYLYVRMLRNPSLYGIAPDV 978

Query: 560  LEKDNTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYN 381
            L +D TLEERRADLIH+AA+ILDRNNLVKYDRKSGYFQVTDLGRI+SYYYI+HGT+STYN
Sbjct: 979  LTRDITLEERRADLIHTAASILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYN 1038

Query: 380  EHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKESLEEPSAKINVL 201
            EHLKPTMGDIELCRLFSLSEEFKYVTVR++EKMELAKLLDRVPIP+KESLEEPSAKINVL
Sbjct: 1039 EHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVL 1098

Query: 200  LQARISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRM 21
            LQA ISQLKLEGLSL SDMVFITQ+AGRLLRALFEIVLKRGWAQLAE+AL LCKMV+KRM
Sbjct: 1099 LQAYISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVTKRM 1158

Query: 20   WSVQTP 3
            WSVQTP
Sbjct: 1159 WSVQTP 1164



 Score =  296 bits (759), Expect = 3e-77
 Identities = 198/648 (30%), Positives = 328/648 (50%), Gaps = 3/648 (0%)
 Frame = -2

Query: 1952 KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKI 1773
            K+ N VQ++V+     + +N+L+ APTG+GKT  A   IL+     + PD     S  ++
Sbjct: 1361 KHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNH--QKVPD-----SVMRV 1413

Query: 1772 VYVAPMKALVAEVVGNLSKRLAD-YNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIIT 1596
            VYVAP+++L  E   +  K+      + V ELTG+ +   + +E+ QII++TPEKWD ++
Sbjct: 1414 VYVAPIESLAKERYRDWEKKFGGGLKLRVVELTGETATDLKLLEKGQIIISTPEKWDALS 1473

Query: 1595 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPN 1416
            R+   R   QLV               GP+LE +VSR        +  IR+V LS +L N
Sbjct: 1474 RRWKQRKQVQLVSLFIIDELHLIGGQGGPILEVVVSRMRYIASQVENKIRIVALSTSLAN 1533

Query: 1415 YEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCA- 1239
             +D+  ++    S GLF F    RP PL     GV +     R Q M    Y  ++  A 
Sbjct: 1534 AKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAK 1592

Query: 1238 GKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTDLKD 1059
             +   L+FV +RK    TA  +   + A+     F+       E L    EK+++  LK 
Sbjct: 1593 NRKPALIFVPTRKHVRLTAVDLITYSGADSGEKPFLL---RPPEELEPFLEKIRDEMLKV 1649

Query: 1058 MLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNP 879
             L  G    H G++ +D  +V  LF  G IQV V  +++ WGV L AH V++ GTQ Y+ 
Sbjct: 1650 TLREGVGYLHEGLNSLDHDIVTQLFDAGWIQVCVLNSSMCWGVTLSAHLVVVMGTQYYDG 1709

Query: 878  EKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSK 699
             + A T+    D++QM+G A RP  D+ G+ +I+      +YY   + +  P+ES     
Sbjct: 1710 RENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHF 1769

Query: 698  LADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERRADL 519
            L DNLNAEIV G ++N ++A  +L +T++Y R+ +NP  Y L          L +  +++
Sbjct: 1770 LHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLSDHLSEM 1826

Query: 518  IHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCR 339
            + +  + L+ +  +  +         +LG I+SYYYIS+ T+  ++  +        L  
Sbjct: 1827 VENTLSDLEASKCITIEEDMD-LSPLNLGMIASYYYISYTTIERFSSSVTSKTKMKGLLE 1885

Query: 338  LFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQARISQLKLEGL 162
            + S + E+  + +R  E+  + KL++      +   + +P  K N LLQA  S+ +  G 
Sbjct: 1886 ILSSASEYAQLPIRPGEEEVVRKLINHQRFSFENPKVTDPHVKANALLQAHFSR-QFVGG 1944

Query: 161  SLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMW 18
            +L  D   +  +A RLL+A+ +++   GW  LA   +++ +MV++ MW
Sbjct: 1945 NLALDQKEVLLSANRLLQAMVDVISSNGWLSLALLTMEVSQMVTQGMW 1992


>ref|XP_003571468.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
            [Brachypodium distachyon]
          Length = 2179

 Score = 1390 bits (3598), Expect = 0.0
 Identities = 700/903 (77%), Positives = 797/903 (88%), Gaps = 3/903 (0%)
 Frame = -2

Query: 2702 GGIDDEDMENADEGMNLNVQDIDAYWLQRKITQAHSSAIDPQRSQQLAEEVLRILAGDGD 2523
            G +DD+D++N++EG+ +NVQDIDAYWLQRKITQA+   IDPQ+SQ+LAEE+L+I+A +GD
Sbjct: 267  GELDDDDLQNSNEGLTINVQDIDAYWLQRKITQAYED-IDPQQSQKLAEEILKIIA-EGD 324

Query: 2522 SRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSEDQEERKRIEYEMSGDGVLRA 2343
             RDVEN LV  LD+EKFDLIKL+LRNR KIVWCTRLAR+EDQEERK+IE EM  +  L  
Sbjct: 325  DRDVENRLVMELDYEKFDLIKLVLRNRFKIVWCTRLARAEDQEERKKIEEEMMDNPTLAP 384

Query: 2342 ILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXXXXXXXXXG---MENSWLKGQ 2172
            ILEQLHATRA+AKERQKNLE+S+R+EA++L                     ME+ WLKGQ
Sbjct: 385  ILEQLHATRASAKERQKNLEKSIRDEAKRLLNNDNTAGTDGPRDRRAVDRDMESGWLKGQ 444

Query: 2171 RQLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVHXXXXXXXPLSDGEDLIKIT 1992
            RQLLDL+S+SFHQGGLLMANKKCELP GSFR+  KGYEEVH       P   GE ++KI+
Sbjct: 445  RQLLDLDSLSFHQGGLLMANKKCELPEGSFRTPHKGYEEVHVPALKARPYGAGEKIVKIS 504

Query: 1991 DMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNR 1812
            DMP W QPAF GM+ LNRVQSRVY+TALF  +N+LLCAPTGAGKTNVAVLTIL QIGL+ 
Sbjct: 505  DMPGWAQPAFAGMQQLNRVQSRVYDTALFKPDNILLCAPTGAGKTNVAVLTILHQIGLHM 564

Query: 1811 GPDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQI 1632
              DGE D + +KIVYVAPMKALVAEVVGNLS RL D+N+TV+EL+GDQ+L++QQI+ETQI
Sbjct: 565  -KDGEFDNTKYKIVYVAPMKALVAEVVGNLSARLKDFNVTVRELSGDQNLTKQQIDETQI 623

Query: 1631 IVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEM 1452
            IVTTPEKWDI+TRKSGDRTYTQ+VK           DNRGPVLESIVSRTVRQIETT+E 
Sbjct: 624  IVTTPEKWDIVTRKSGDRTYTQMVKLLIIDEIHLLHDNRGPVLESIVSRTVRQIETTKEH 683

Query: 1451 IRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMN 1272
            IRLVGLSATLPNYEDVA+FLRV +S+GLF+FDNSYRPCPL+QQYIG+TVRKPLQRFQLMN
Sbjct: 684  IRLVGLSATLPNYEDVAVFLRV-RSEGLFHFDNSYRPCPLAQQYIGITVRKPLQRFQLMN 742

Query: 1271 DICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSE 1092
            +ICYEKV++ AGKHQVL+FVHSRKETAKTAR IRD ALANDT+ RF+K + AS+EIL S+
Sbjct: 743  EICYEKVMAAAGKHQVLIFVHSRKETAKTARAIRDTALANDTLTRFLKDESASQEILSSQ 802

Query: 1091 SEKVKNTDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHT 912
            +E VK++DLKD+LPYGFAIHHAGM+RVDR  VE+LF D HIQVLVSTATLAWGVNLPAHT
Sbjct: 803  AELVKSSDLKDLLPYGFAIHHAGMARVDREFVEELFADKHIQVLVSTATLAWGVNLPAHT 862

Query: 911  VIIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQ 732
            VIIKGTQIYNPEKGAWTELSPLD+MQMLGRAGRPQYD++GEGII+TGHSELQYYLSLMNQ
Sbjct: 863  VIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTHGEGIILTGHSELQYYLSLMNQ 922

Query: 731  QLPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEK 552
            QLPIESQFVSKLAD LNAEIVLGT+QNAREAC+WLGYTYLYIRMLRNP LYGL AD +E 
Sbjct: 923  QLPIESQFVSKLADQLNAEIVLGTIQNAREACSWLGYTYLYIRMLRNPTLYGLPADIMET 982

Query: 551  DNTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHL 372
            D TL+ERRADL+HSAA +LD+NNL+KYDRK+GYFQVTDLGRI+SYYYISHGT+STYNE+L
Sbjct: 983  DKTLDERRADLVHSAANLLDKNNLIKYDRKTGYFQVTDLGRIASYYYISHGTISTYNEYL 1042

Query: 371  KPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKESLEEPSAKINVLLQA 192
            KPTMGDIELCRLFSLSEEFKYV+VR++EKMELAKLLDRVPIPVKESLEEPSAKINVLLQA
Sbjct: 1043 KPTMGDIELCRLFSLSEEFKYVSVRQDEKMELAKLLDRVPIPVKESLEEPSAKINVLLQA 1102

Query: 191  RISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSV 12
             IS+LKLEGLSL SDMV+I Q+AGRLLRALFEIVLKRGWAQLAE+AL LCKM+ K+MWSV
Sbjct: 1103 YISRLKLEGLSLGSDMVYIRQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMIDKQMWSV 1162

Query: 11   QTP 3
            QTP
Sbjct: 1163 QTP 1165



 Score =  301 bits (772), Expect = 9e-79
 Identities = 202/651 (31%), Positives = 341/651 (52%), Gaps = 2/651 (0%)
 Frame = -2

Query: 1964 FGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLS 1785
            +   K+ N +Q++V+     + + +L+ APTG+GKT  A   IL+     +   GE ++ 
Sbjct: 1358 YSAFKHFNPIQTQVFTVLYNSDDTVLVAAPTGSGKTICAEFAILRNH--QKALSGETNM- 1414

Query: 1784 SFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQIIVTTPEKWD 1605
              ++VY+AP++AL  E   + SK+  ++   V ELTG+ +   + +++ +II++TPEKWD
Sbjct: 1415 --RVVYIAPIEALAKERYRDWSKKFGEF-ARVVELTGETAADLKLLDKGEIIISTPEKWD 1471

Query: 1604 IITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSAT 1425
             ++R+   R + Q V              +G VLE IVSR  R        IR+V LSA+
Sbjct: 1472 ALSRRWKQRKHIQQVSLFIVDELHLIGSEKGHVLEIIVSRMRRISSHIGSNIRIVALSAS 1531

Query: 1424 LPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLS 1245
            L N +D+  ++    + GLF F  + RP PL     GV +     R Q M    Y  V  
Sbjct: 1532 LGNAKDLGEWIGAT-AHGLFNFPPAVRPVPLEIHIQGVDIANFEARMQAMAKPTYTAVTQ 1590

Query: 1244 CAGKHQ-VLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTD 1068
             A   +  LVFV +RK    TA  +   + A      F+ G   S++ + + +  V    
Sbjct: 1591 HAKNGKPALVFVPTRKHARLTALDLCAYSSAEGAGTPFLLG---SKDEMDTFTGGVNEET 1647

Query: 1067 LKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTVIIKGTQI 888
            LK+ L  G    H G+S +D+ LV  LF  G IQV V+++T+ WG +LPAH V++ GTQ 
Sbjct: 1648 LKNTLKCGVGYLHEGLSELDQELVTQLFLGGRIQVCVASSTMCWGRSLPAHLVVVMGTQY 1707

Query: 887  YNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQF 708
            Y+  + A T+    D++QM+G A RP  D+ G+ +I+      +YY   + +  P+ES  
Sbjct: 1708 YDGRESAHTDYPITDLLQMMGHASRPLQDNSGKCVILCHAPRKEYYKKFLFEAFPVESHL 1767

Query: 707  VSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERR 528
               L D++NAE+V+G V+N ++A  +L +T++Y R+ +NP  Y L          L +  
Sbjct: 1768 HHFLHDHMNAEVVVGVVENKQDAVDYLTWTFMYRRLNKNPNYYNLQG---VSHRHLSDHL 1824

Query: 527  ADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIE 348
            ++LI +  T L+ +  V  + +  Y +  +LG I++YYYIS+ T+  ++  L        
Sbjct: 1825 SELIETVLTDLESSKCVAVE-EDMYLKPLNLGLIAAYYYISYTTIERFSSMLTQKTKMKG 1883

Query: 347  LCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPV-KESLEEPSAKINVLLQARISQLKL 171
            L  + + + E+  +  R  E+  + +L+      + K    +P  K N LLQ+  ++  +
Sbjct: 1884 LLEILASASEYAELPSRPGEEEYIERLVRHQRFSIEKPKYGDPHVKANALLQSHFARHTV 1943

Query: 170  EGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMW 18
             G +L +D   I  +A RLL+A+ +++   GW  LA  A++L +MV++ MW
Sbjct: 1944 VG-NLAADQREILLSAHRLLQAMVDVISSNGWLSLALNAMELSQMVTQGMW 1993


>gb|EOY19724.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 1
            [Theobroma cacao]
          Length = 2176

 Score = 1389 bits (3595), Expect = 0.0
 Identities = 705/902 (78%), Positives = 786/902 (87%), Gaps = 2/902 (0%)
 Frame = -2

Query: 2702 GGIDDEDMENADEGMNLNVQDIDAYWLQRKITQAHSSAIDPQRSQQLAEEVLRILAGDGD 2523
            GGIDD+DM  A+EGM+LNVQDIDAYWLQRKI+QA+   IDPQ+ Q+LAEEVL+ILA +GD
Sbjct: 256  GGIDDDDMHEANEGMSLNVQDIDAYWLQRKISQAYDQQIDPQQCQKLAEEVLKILA-EGD 314

Query: 2522 SRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSEDQEERKRIEYEMSGDGV-LR 2346
             R+VE  L+  L F+KF LIK LLRNR K+VWCTRLAR+EDQEERK+IE EM   G  L 
Sbjct: 315  DREVETKLLVHLQFDKFSLIKYLLRNRLKVVWCTRLARAEDQEERKKIEEEMMSLGPDLA 374

Query: 2345 AILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXXXXXXXXXG-MENSWLKGQR 2169
            AILEQLHATRATAKERQKNLE+S+REEAR+L                    +  WLKGQR
Sbjct: 375  AILEQLHATRATAKERQKNLEKSIREEARRLKDESVGDGDRDRRGLADRDTDGGWLKGQR 434

Query: 2168 QLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVHXXXXXXXPLSDGEDLIKITD 1989
            QLLDL+S++F QGGLLMANKKCELP GS++   KGYEEVH       PL   E L+KI++
Sbjct: 435  QLLDLDSLAFEQGGLLMANKKCELPMGSYKHHAKGYEEVHVPAPKSKPLESDERLVKISE 494

Query: 1988 MPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRG 1809
            MPEW QPAF GM+ LNRVQS+VYETALF A+N+LLCAPTGAGKTNVAVLTILQQ+ LN  
Sbjct: 495  MPEWAQPAFKGMQQLNRVQSKVYETALFAADNILLCAPTGAGKTNVAVLTILQQLALNMD 554

Query: 1808 PDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQII 1629
             DG ++ S++KIVYVAPMKALVAEVVGNLS RL  Y +TV+EL+GDQ+L+RQQI+ETQII
Sbjct: 555  SDGSINHSNYKIVYVAPMKALVAEVVGNLSHRLEAYGVTVRELSGDQTLTRQQIDETQII 614

Query: 1628 VTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMI 1449
            VTTPEKWDIITRKSGDRTYTQLVK           DNRGPVLESIV+RTVRQIETT+E I
Sbjct: 615  VTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHI 674

Query: 1448 RLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMND 1269
            RLVGLSATLPNYEDVALFLRVD  +GLF+FDNSYRP PLSQQYIG+TV+KPLQRFQLMND
Sbjct: 675  RLVGLSATLPNYEDVALFLRVDLKEGLFHFDNSYRPVPLSQQYIGITVKKPLQRFQLMND 734

Query: 1268 ICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSES 1089
            ICYEKV++ AGKHQVL+FVHSRKET KTAR +RD ALANDT+ RF+K D ASREIL S +
Sbjct: 735  ICYEKVMAVAGKHQVLIFVHSRKETTKTARAVRDTALANDTLSRFLKEDAASREILQSHT 794

Query: 1088 EKVKNTDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTV 909
            + VK+ DLKD+LPYGFAIHHAG++R DR +VE+LF DGH+QVLVSTATLAWGVNLPAHTV
Sbjct: 795  DMVKSNDLKDLLPYGFAIHHAGLARTDRQIVEELFADGHVQVLVSTATLAWGVNLPAHTV 854

Query: 908  IIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQ 729
            IIKGTQIY+PEKGAWTELSPLD+MQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQ
Sbjct: 855  IIKGTQIYSPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQ 914

Query: 728  LPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKD 549
            LPIESQFVSKLAD LNAEIVLGTVQNAREAC W+ YTYLY+RMLRNP LYGL AD L +D
Sbjct: 915  LPIESQFVSKLADQLNAEIVLGTVQNAREACNWITYTYLYVRMLRNPTLYGLPADVLSRD 974

Query: 548  NTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLK 369
             TL+ERRADLIHSAATILD+NNLVKYDRKSGYFQVTDLGRI+SYYYI+HGT+STYNEHLK
Sbjct: 975  LTLDERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLK 1034

Query: 368  PTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKESLEEPSAKINVLLQAR 189
            PTMGDIEL RLFSLSEEFKYVTVR++EKMELAKLLDRVPIP+KESLEEPSAKINVLLQA 
Sbjct: 1035 PTMGDIELYRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQAY 1094

Query: 188  ISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQ 9
            ISQLKLEGLSL SDMV+ITQ+AGRLLRALFEIVLKRGWAQLAE+AL LCKMV+KRMW+VQ
Sbjct: 1095 ISQLKLEGLSLTSDMVYITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVTKRMWNVQ 1154

Query: 8    TP 3
            TP
Sbjct: 1155 TP 1156



 Score =  300 bits (768), Expect = 3e-78
 Identities = 201/648 (31%), Positives = 328/648 (50%), Gaps = 3/648 (0%)
 Frame = -2

Query: 1952 KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKI 1773
            K+ N VQ++V+     T +N+L+ APTG+GKT  A   IL+     +GPD     S  ++
Sbjct: 1353 KHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNH--QKGPD-----SIMRV 1405

Query: 1772 VYVAPMKALVAEVVGNLSKRLA-DYNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIIT 1596
            VY+AP++A+  E   +  K+      + V ELTG+ S+  + +E+ QI+++TPEKWD ++
Sbjct: 1406 VYIAPLEAIAKERYRDWEKKFGRGLGMRVVELTGETSMDLKLLEKGQIVISTPEKWDALS 1465

Query: 1595 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPN 1416
            R+   R Y Q V               GPVLE IVSR        +  IR+V LS +L N
Sbjct: 1466 RRWKQRKYVQQVSVFIVDELHLIGGQGGPVLEVIVSRMRYIASQVENKIRIVALSTSLAN 1525

Query: 1415 YEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAG 1236
             +D+  ++    S GLF F    RP PL     GV +     R Q M    Y  V+  A 
Sbjct: 1526 AKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAVVQHAK 1584

Query: 1235 KHQ-VLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTDLKD 1059
              +  +VFV +RK    TA  +   +  ++    F      S E L    +K+    L+ 
Sbjct: 1585 NGKPAIVFVPTRKHVRLTAVDLMSYSKVDNEEPAFRL---RSAEELKPFVDKISEETLRT 1641

Query: 1058 MLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNP 879
             L +G    H G++ +D+ +V  LF  G IQV V +++L WGV L AH V++ GTQ Y+ 
Sbjct: 1642 TLEHGVGYLHEGLNSLDQEVVSQLFEAGWIQVCVMSSSLCWGVPLSAHLVVVMGTQYYDG 1701

Query: 878  EKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSK 699
             + A T+    D++QM+G A RP  D+ G+ +I+      +YY   + +  P+ES     
Sbjct: 1702 RENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHF 1761

Query: 698  LADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERRADL 519
            L DN NAEIV   ++N ++A  +L +T++Y R+ +NP  Y L          L +  ++L
Sbjct: 1762 LHDNFNAEIVALVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLSDHLSEL 1818

Query: 518  IHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCR 339
            + +  T L+ +  +  +         +LG I+SYYYIS+ T+  ++  L        L  
Sbjct: 1819 VENTLTDLEASKCITIEDDMD-LSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLE 1877

Query: 338  LFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQARISQLKLEGL 162
            + + + E+  + +R  E+  L +L++      +     +P  K N LLQA  ++  + G 
Sbjct: 1878 ILASASEYAQLPIRPGEEDVLRRLINHQRFSFENPRCTDPHVKANALLQAHFTRQHVGG- 1936

Query: 161  SLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMW 18
            +L  D   +   A RLL+A+ +++   GW  LA  A+++ +MV++ MW
Sbjct: 1937 NLALDQREVLLYATRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGMW 1984


>gb|EEE56150.1| hypothetical protein OsJ_05035 [Oryza sativa Japonica Group]
          Length = 2238

 Score = 1388 bits (3593), Expect = 0.0
 Identities = 699/902 (77%), Positives = 796/902 (88%), Gaps = 2/902 (0%)
 Frame = -2

Query: 2702 GGIDDEDMENADEGMNLNVQDIDAYWLQRKITQAHSSAIDPQRSQQLAEEVLRILAGDGD 2523
            G +DD+DM+N++EG+ +NVQDIDAYWLQRK++QA+   IDPQ SQ+LAEE+L+I+A +GD
Sbjct: 327  GELDDDDMQNSNEGLTINVQDIDAYWLQRKVSQAYED-IDPQHSQKLAEEILKIIA-EGD 384

Query: 2522 SRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSEDQEERKRIEYEMSGDGVLRA 2343
             RDVEN LV LLD+EKFDLIKLLLRNR KIVWCTRLAR+EDQE+RK+IE +M G+  L  
Sbjct: 385  DRDVENRLVMLLDYEKFDLIKLLLRNRLKIVWCTRLARAEDQEQRKKIEEDMMGNPTLTP 444

Query: 2342 ILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXXXXXXXXXG--MENSWLKGQR 2169
            ILEQLHATRA+AKERQKNLE+S+R+EA++L                    ME+ WLKGQR
Sbjct: 445  ILEQLHATRASAKERQKNLEKSIRDEAKRLTKSENTGIDGARDRRAVDRDMESGWLKGQR 504

Query: 2168 QLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVHXXXXXXXPLSDGEDLIKITD 1989
            QLLDL+S+SFHQGGLLMANKKCELP GSFR+  KGYEEVH       P   GE ++KI+D
Sbjct: 505  QLLDLDSLSFHQGGLLMANKKCELPPGSFRTPHKGYEEVHVPALKAKPYETGEKIVKISD 564

Query: 1988 MPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRG 1809
            MPEW QPAF  M  LNRVQS+VYETALF  +N+LLCAPTGAGKTNVAVLTILQQIGL+  
Sbjct: 565  MPEWAQPAFAKMTQLNRVQSKVYETALFKPDNILLCAPTGAGKTNVAVLTILQQIGLHM- 623

Query: 1808 PDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQII 1629
             DG  D + +KIVYVAPMKALVAEVVGNLS RL+ Y ITV+EL+GDQ+L++QQI+ETQII
Sbjct: 624  KDGVFDNTKYKIVYVAPMKALVAEVVGNLSARLSAYGITVRELSGDQNLTKQQIDETQII 683

Query: 1628 VTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMI 1449
            VTTPEKWDI+TRKSGDRTYTQ+VK           DNRGPVLESIVSRTVRQIETT+E I
Sbjct: 684  VTTPEKWDIVTRKSGDRTYTQMVKLLIIDEIHLLHDNRGPVLESIVSRTVRQIETTKEHI 743

Query: 1448 RLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMND 1269
            RLVGLSATLPNYEDVA+FLRV +S GLF+FDNSYRPCPL+QQYIG+TVRKPLQRFQLMN+
Sbjct: 744  RLVGLSATLPNYEDVAVFLRV-RSDGLFHFDNSYRPCPLAQQYIGITVRKPLQRFQLMNE 802

Query: 1268 ICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSES 1089
            ICYEKV++ AGKHQVL+FVHSRKETAKTAR IRD ALANDT+ RF+K D AS+EIL S++
Sbjct: 803  ICYEKVMASAGKHQVLIFVHSRKETAKTARAIRDTALANDTLNRFLKDDSASQEILGSQA 862

Query: 1088 EKVKNTDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTV 909
            E VK++DLKD+LPYGFAIHHAG++RVDR LVE+LF D HIQVLVSTATLAWGVNLPAHTV
Sbjct: 863  ELVKSSDLKDLLPYGFAIHHAGLARVDRELVEELFADKHIQVLVSTATLAWGVNLPAHTV 922

Query: 908  IIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQ 729
            IIKGTQIYNPEKGAWTELSPLD+MQMLGRAGRPQYD++GEGII+TGHSELQYYLSLMNQQ
Sbjct: 923  IIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTHGEGIILTGHSELQYYLSLMNQQ 982

Query: 728  LPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKD 549
            LPIESQF+S+LAD LNAEIVLGT+QNAREAC+WLGYTYLYIRMLRNP LYGL AD +E D
Sbjct: 983  LPIESQFISRLADQLNAEIVLGTIQNAREACSWLGYTYLYIRMLRNPTLYGLPADIMETD 1042

Query: 548  NTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLK 369
             TL+ERRADL+HSAA +LDRNNL+KYDRK+GYFQVTDLGRI+SYYYISHGT+STYNE+LK
Sbjct: 1043 KTLDERRADLVHSAANLLDRNNLIKYDRKTGYFQVTDLGRIASYYYISHGTISTYNEYLK 1102

Query: 368  PTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKESLEEPSAKINVLLQAR 189
            PTMGDIELCRLFSLSEEFKYV+VR++EKMELAKLLDRVPIPVKESLEEPSAKINVLLQA 
Sbjct: 1103 PTMGDIELCRLFSLSEEFKYVSVRQDEKMELAKLLDRVPIPVKESLEEPSAKINVLLQAY 1162

Query: 188  ISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQ 9
            IS+LKLEGLSL SDMV+I Q+AGRLLRALFEIVLKRGWAQLAE+AL LCKM+ K+MW+VQ
Sbjct: 1163 ISRLKLEGLSLSSDMVYIRQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMIDKQMWNVQ 1222

Query: 8    TP 3
            TP
Sbjct: 1223 TP 1224



 Score =  298 bits (763), Expect = 1e-77
 Identities = 200/651 (30%), Positives = 338/651 (51%), Gaps = 2/651 (0%)
 Frame = -2

Query: 1964 FGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLS 1785
            +   K+ N +Q++V+     T +++L+ APTG+GKT  A   IL+     +   GE   S
Sbjct: 1417 YSAFKHFNPIQTQVFTVLYNTDDSVLVAAPTGSGKTICAEFAILRNH--QKAVSGE---S 1471

Query: 1784 SFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQIIVTTPEKWD 1605
            + ++VY+AP++AL  E   +  ++  ++   V ELTG+ +   + +++ +II++TPEKWD
Sbjct: 1472 NMRVVYIAPIEALAKERYRDWEQKFGEF-ARVVELTGETAADLKLLDKGEIIISTPEKWD 1530

Query: 1604 IITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSAT 1425
             ++R+   R   Q V              +G VLE IVSR  R        IR+V LSA+
Sbjct: 1531 ALSRRWKQRKQVQQVSLFIVDELHLIGSEKGHVLEVIVSRMRRIASHIGSNIRIVALSAS 1590

Query: 1424 LPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLS 1245
            L N +D+  ++    S GLF F  + RP PL     GV +     R Q M    Y  +  
Sbjct: 1591 LANAKDLGEWIGAT-SHGLFNFPPAVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAITQ 1649

Query: 1244 CAGKHQ-VLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTD 1068
             A   +  LVFV +RK    TA  +   + A      F+ G   S + + + +  + +  
Sbjct: 1650 HAKNGKPALVFVPTRKHARLTALDLCAYSSAEGGGTPFLLG---SEDEMDAFTGGISDET 1706

Query: 1067 LKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTVIIKGTQI 888
            LK  L  G    H G+S +++ +V  LF  G IQV V+++T+ WG +LPAH V++ GTQ 
Sbjct: 1707 LKYTLKCGVGYLHEGLSDLEQEVVTQLFLGGRIQVCVASSTVCWGRSLPAHLVVVMGTQY 1766

Query: 887  YNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQF 708
            Y+  + A T+    D++QM+G A RP  D+ G+ +I+      +YY   + +  P+ES  
Sbjct: 1767 YDGRENAHTDYPITDLLQMMGHASRPLQDNSGKCVILCHAPRKEYYKKFLFEAFPVESHL 1826

Query: 707  VSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERR 528
               L D++NAE+V+G ++N ++A  +L +T++Y R+ +NP  Y L          L +  
Sbjct: 1827 HHFLHDHMNAEVVVGVIENKQDAVDYLTWTFMYRRLTKNPNYYNLQG---VSHRHLSDHL 1883

Query: 527  ADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIE 348
            ++L+ +    L+ +  V  + +  Y +  +LG I+SYYYIS+ T+  ++  L        
Sbjct: 1884 SELVETVLNDLESSKCVAIE-EDMYLKPLNLGLIASYYYISYTTIERFSSMLTQKTKMKG 1942

Query: 347  LCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPV-KESLEEPSAKINVLLQARISQLKL 171
            L  + + + E+  +  R  E+  + KL+      + K    +P  K N LLQA  S+  +
Sbjct: 1943 LLEILASASEYAELPSRPGEEDFIEKLVRHQRFSIEKPKYGDPHVKANALLQAHFSRHTI 2002

Query: 170  EGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMW 18
             G +L +D   I  +A RLL+A+ +++   GW  LA  A++L +MV++ MW
Sbjct: 2003 LG-NLAADQREILLSAHRLLQAMVDVISSNGWLTLALNAMELSQMVTQGMW 2052


>gb|EAY84119.1| hypothetical protein OsI_05501 [Oryza sativa Indica Group]
          Length = 2177

 Score = 1388 bits (3593), Expect = 0.0
 Identities = 699/902 (77%), Positives = 796/902 (88%), Gaps = 2/902 (0%)
 Frame = -2

Query: 2702 GGIDDEDMENADEGMNLNVQDIDAYWLQRKITQAHSSAIDPQRSQQLAEEVLRILAGDGD 2523
            G +DD+DM+N++EG+ +NVQDIDAYWLQRK++QA+   IDPQ SQ+LAEE+L+I+A +GD
Sbjct: 266  GELDDDDMQNSNEGLTINVQDIDAYWLQRKVSQAYED-IDPQHSQKLAEEILKIIA-EGD 323

Query: 2522 SRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSEDQEERKRIEYEMSGDGVLRA 2343
             RDVEN LV LLD+EKFDLIKLLLRNR KIVWCTRLAR+EDQE+RK+IE +M G+  L  
Sbjct: 324  DRDVENRLVMLLDYEKFDLIKLLLRNRLKIVWCTRLARAEDQEQRKKIEEDMMGNPTLTP 383

Query: 2342 ILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXXXXXXXXXG--MENSWLKGQR 2169
            ILEQLHATRA+AKERQKNLE+S+R+EA++L                    ME+ WLKGQR
Sbjct: 384  ILEQLHATRASAKERQKNLEKSIRDEAKRLTKSENTGIDGARDRRAVDRDMESGWLKGQR 443

Query: 2168 QLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVHXXXXXXXPLSDGEDLIKITD 1989
            QLLDL+S+SFHQGGLLMANKKCELP GSFR+  KGYEEVH       P   GE ++KI+D
Sbjct: 444  QLLDLDSLSFHQGGLLMANKKCELPPGSFRTPHKGYEEVHVPALKAKPYETGEKIVKISD 503

Query: 1988 MPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRG 1809
            MPEW QPAF  M  LNRVQS+VYETALF  +N+LLCAPTGAGKTNVAVLTILQQIGL+  
Sbjct: 504  MPEWAQPAFAKMTQLNRVQSKVYETALFKPDNILLCAPTGAGKTNVAVLTILQQIGLHM- 562

Query: 1808 PDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQII 1629
             DG  D + +KIVYVAPMKALVAEVVGNLS RL+ Y ITV+EL+GDQ+L++QQI+ETQII
Sbjct: 563  KDGVFDNTKYKIVYVAPMKALVAEVVGNLSARLSAYGITVRELSGDQNLTKQQIDETQII 622

Query: 1628 VTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMI 1449
            VTTPEKWDI+TRKSGDRTYTQ+VK           DNRGPVLESIVSRTVRQIETT+E I
Sbjct: 623  VTTPEKWDIVTRKSGDRTYTQMVKLLIIDEIHLLHDNRGPVLESIVSRTVRQIETTKEHI 682

Query: 1448 RLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMND 1269
            RLVGLSATLPNYEDVA+FLRV +S GLF+FDNSYRPCPL+QQYIG+TVRKPLQRFQLMN+
Sbjct: 683  RLVGLSATLPNYEDVAVFLRV-RSDGLFHFDNSYRPCPLAQQYIGITVRKPLQRFQLMNE 741

Query: 1268 ICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSES 1089
            ICYEKV++ AGKHQVL+FVHSRKETAKTAR IRD ALANDT+ RF+K D AS+EIL S++
Sbjct: 742  ICYEKVMASAGKHQVLIFVHSRKETAKTARAIRDTALANDTLNRFLKDDSASQEILGSQA 801

Query: 1088 EKVKNTDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTV 909
            E VK++DLKD+LPYGFAIHHAG++RVDR LVE+LF D HIQVLVSTATLAWGVNLPAHTV
Sbjct: 802  ELVKSSDLKDLLPYGFAIHHAGLARVDRELVEELFADKHIQVLVSTATLAWGVNLPAHTV 861

Query: 908  IIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQ 729
            IIKGTQIYNPEKGAWTELSPLD+MQMLGRAGRPQYD++GEGII+TGHSELQYYLSLMNQQ
Sbjct: 862  IIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTHGEGIILTGHSELQYYLSLMNQQ 921

Query: 728  LPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKD 549
            LPIESQF+S+LAD LNAEIVLGT+QNAREAC+WLGYTYLYIRMLRNP LYGL AD +E D
Sbjct: 922  LPIESQFISRLADQLNAEIVLGTIQNAREACSWLGYTYLYIRMLRNPTLYGLPADIMETD 981

Query: 548  NTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLK 369
             TL+ERRADL+HSAA +LDRNNL+KYDRK+GYFQVTDLGRI+SYYYISHGT+STYNE+LK
Sbjct: 982  KTLDERRADLVHSAANLLDRNNLIKYDRKTGYFQVTDLGRIASYYYISHGTISTYNEYLK 1041

Query: 368  PTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKESLEEPSAKINVLLQAR 189
            PTMGDIELCRLFSLSEEFKYV+VR++EKMELAKLLDRVPIPVKESLEEPSAKINVLLQA 
Sbjct: 1042 PTMGDIELCRLFSLSEEFKYVSVRQDEKMELAKLLDRVPIPVKESLEEPSAKINVLLQAY 1101

Query: 188  ISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQ 9
            IS+LKLEGLSL SDMV+I Q+AGRLLRALFEIVLKRGWAQLAE+AL LCKM+ K+MW+VQ
Sbjct: 1102 ISRLKLEGLSLSSDMVYIRQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMIDKQMWNVQ 1161

Query: 8    TP 3
            TP
Sbjct: 1162 TP 1163



 Score =  298 bits (763), Expect = 1e-77
 Identities = 200/651 (30%), Positives = 338/651 (51%), Gaps = 2/651 (0%)
 Frame = -2

Query: 1964 FGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLS 1785
            +   K+ N +Q++V+     T +++L+ APTG+GKT  A   IL+     +   GE   S
Sbjct: 1356 YSAFKHFNPIQTQVFTVLYNTDDSVLVAAPTGSGKTICAEFAILRNH--QKAVSGE---S 1410

Query: 1784 SFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQIIVTTPEKWD 1605
            + ++VY+AP++AL  E   +  ++  ++   V ELTG+ +   + +++ +II++TPEKWD
Sbjct: 1411 NMRVVYIAPIEALAKERYRDWEQKFGEF-ARVVELTGETAADLKLLDKGEIIISTPEKWD 1469

Query: 1604 IITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSAT 1425
             ++R+   R   Q V              +G VLE IVSR  R        IR+V LSA+
Sbjct: 1470 ALSRRWKQRKQVQQVSLFIVDELHLIGSEKGHVLEVIVSRMRRIASHIGSNIRIVALSAS 1529

Query: 1424 LPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLS 1245
            L N +D+  ++    S GLF F  + RP PL     GV +     R Q M    Y  +  
Sbjct: 1530 LANAKDLGEWIGAT-SHGLFNFPPAVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAITQ 1588

Query: 1244 CAGKHQ-VLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTD 1068
             A   +  LVFV +RK    TA  +   + A      F+ G   S + + + +  + +  
Sbjct: 1589 HAKNGKPALVFVPTRKHARLTALDLCAYSSAEGGGTPFLLG---SEDEMDAFTGGISDET 1645

Query: 1067 LKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTVIIKGTQI 888
            LK  L  G    H G+S +++ +V  LF  G IQV V+++T+ WG +LPAH V++ GTQ 
Sbjct: 1646 LKYTLKCGVGYLHEGLSDLEQEVVTQLFLSGRIQVCVASSTVCWGRSLPAHLVVVMGTQY 1705

Query: 887  YNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQF 708
            Y+  + A T+    D++QM+G A RP  D+ G+ +I+      +YY   + +  P+ES  
Sbjct: 1706 YDGRENAHTDYPITDLLQMMGHASRPLQDNSGKCVILCHAPRKEYYKKFLFEAFPVESHL 1765

Query: 707  VSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERR 528
               L D++NAE+V+G ++N ++A  +L +T++Y R+ +NP  Y L          L +  
Sbjct: 1766 HHFLHDHMNAEVVVGVIENKQDAVDYLTWTFMYRRLTKNPNYYNLQG---VSHRHLSDHL 1822

Query: 527  ADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIE 348
            ++L+ +    L+ +  V  + +  Y +  +LG I+SYYYIS+ T+  ++  L        
Sbjct: 1823 SELVETVLNDLESSKCVAIE-EDMYLKPLNLGLIASYYYISYTTIERFSSMLTQKTKMKG 1881

Query: 347  LCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPV-KESLEEPSAKINVLLQARISQLKL 171
            L  + + + E+  +  R  E+  + KL+      + K    +P  K N LLQA  S+  +
Sbjct: 1882 LLEILASASEYAELPSRPGEEDFIEKLVRHQRFSIEKPRYGDPHVKANALLQAHFSRHTI 1941

Query: 170  EGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMW 18
             G +L +D   I  +A RLL+A+ +++   GW  LA  A++L +MV++ MW
Sbjct: 1942 LG-NLAADQREILLSAHRLLQAMVDVISSNGWLTLALNAMELSQMVTQGMW 1991


>ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Solanum lycopersicum]
          Length = 2174

 Score = 1384 bits (3581), Expect = 0.0
 Identities = 699/902 (77%), Positives = 786/902 (87%), Gaps = 3/902 (0%)
 Frame = -2

Query: 2699 GIDDEDMENADEGMNLNVQDIDAYWLQRKITQAHSSAIDPQRSQQLAEEVLRILAGDGDS 2520
            GIDD++M  ADEGM LNVQDIDAYWLQRKI+QA+   IDPQ+SQ+LAEEVL+ILA +GD 
Sbjct: 257  GIDDDEMREADEGMTLNVQDIDAYWLQRKISQAYEQQIDPQQSQKLAEEVLKILA-EGDD 315

Query: 2519 RDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSEDQEERKRIEYEMSGDGVLR-A 2343
            R+VE  L+  L F+KF LIK LLRNR K+VWCTRLAR+EDQE RK+IE EM G G    A
Sbjct: 316  REVETKLLVHLQFDKFSLIKYLLRNRLKVVWCTRLARAEDQENRKKIEEEMLGLGQDHVA 375

Query: 2342 ILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXXXXXXXXXG-MENSWLKGQRQ 2166
            ILEQLHATRATAKERQKNLE+S+REEAR+L                   ++N WL GQRQ
Sbjct: 376  ILEQLHATRATAKERQKNLEKSIREEARRLKDESGVDGDGERKALVDRDLDNGWLMGQRQ 435

Query: 2165 LLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVHXXXXXXXPLSDGEDLIKITDM 1986
             LDL+S++F QGGLLMANKKCELP GS+R+ +KGYEEVH       PL  GE+L+KI+ +
Sbjct: 436  FLDLDSLAFQQGGLLMANKKCELPVGSYRNHKKGYEEVHVPALKPRPLDPGEELVKISSI 495

Query: 1985 PEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGP 1806
            PEW QPAF GM  LNRVQS+VYETALF+ EN+LLCAPTGAGKTNVA+LTILQQI LNR  
Sbjct: 496  PEWAQPAFSGMTQLNRVQSKVYETALFSPENILLCAPTGAGKTNVAMLTILQQIALNRNE 555

Query: 1805 D-GELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQII 1629
            D G  + +++KIVYVAPMKALVAEVVGNLSKRL  Y +TVKEL+GDQ+L+RQQIEETQII
Sbjct: 556  DDGTFNHNNYKIVYVAPMKALVAEVVGNLSKRLEHYGVTVKELSGDQTLTRQQIEETQII 615

Query: 1628 VTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMI 1449
            VTTPEKWDIITRKSGDRTYTQLVK           DNRGPVLESI++RT+RQIETT+E I
Sbjct: 616  VTTPEKWDIITRKSGDRTYTQLVKLLIVDEIHLLHDNRGPVLESIIARTIRQIETTKEHI 675

Query: 1448 RLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMND 1269
            RLVGLSATLPNYEDVA+FLRVD  KGLF+FDNSYRP PL+QQYIG+TV+KPLQRFQLMND
Sbjct: 676  RLVGLSATLPNYEDVAVFLRVDLKKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMND 735

Query: 1268 ICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSES 1089
            +CYEKV+S AGKHQVL+FVHSRKET+KTAR IRD ALANDT+G+F+K D  +RE+L S++
Sbjct: 736  VCYEKVISIAGKHQVLIFVHSRKETSKTARAIRDTALANDTLGKFLKEDSLTRELLQSQT 795

Query: 1088 EKVKNTDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTV 909
            E VK+ DLKD+LPYGFAIHHAGM R DR LVEDLF DGH+QVLVSTATLAWGVNLPAHTV
Sbjct: 796  ELVKSNDLKDLLPYGFAIHHAGMVRTDRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTV 855

Query: 908  IIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQ 729
            IIKGTQIYNPEKGAWTELSPLD+MQMLGRAGRPQYD+YGEGII+TGHSELQYYLSLMNQQ
Sbjct: 856  IIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIILTGHSELQYYLSLMNQQ 915

Query: 728  LPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKD 549
            LPIESQF+SKLAD LNAEIVLGTV NA+EAC WL YTYLY+RM+RNP LYGL ADAL+ D
Sbjct: 916  LPIESQFISKLADQLNAEIVLGTVLNAKEACKWLLYTYLYVRMVRNPTLYGLPADALKTD 975

Query: 548  NTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLK 369
              LEERRADL+HSAA +LD+NNLVKYDRKSGYFQVTDLGRI+SYYYI+HGT+STYNEHLK
Sbjct: 976  YALEERRADLVHSAAVLLDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLK 1035

Query: 368  PTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKESLEEPSAKINVLLQAR 189
            PTMGDIELCRLFSLSEEFKYVTVR++EKMELAKLLDRVPIP+KESLEEPSAKINVLLQA 
Sbjct: 1036 PTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQAY 1095

Query: 188  ISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQ 9
            IS+LKLEGLSL SDMV+ITQ+A RL+RALFEIVLKRGWAQLAE+ALK CKM+SKRMWSVQ
Sbjct: 1096 ISRLKLEGLSLSSDMVYITQSAARLMRALFEIVLKRGWAQLAEKALKWCKMISKRMWSVQ 1155

Query: 8    TP 3
            TP
Sbjct: 1156 TP 1157



 Score =  312 bits (799), Expect = 7e-82
 Identities = 203/649 (31%), Positives = 339/649 (52%), Gaps = 4/649 (0%)
 Frame = -2

Query: 1952 KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKI 1773
            K+ N VQ++V+     + +N+L+ APTG+GKT  A   IL+     +GPD     S+ + 
Sbjct: 1354 KHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNH--QKGPD-----STIRA 1406

Query: 1772 VYVAPMKALVAEVVGNLSKRLADY-NITVKELTGDQSLSRQQIEETQIIVTTPEKWDIIT 1596
            VY+AP++AL  E   +   +  D+  + V ELTG+ +   + +E+ Q+I++TPEKWD ++
Sbjct: 1407 VYIAPLEALAKERFNDWKTKFGDHLGMRVVELTGETASDLKLLEKGQLIISTPEKWDALS 1466

Query: 1595 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPN 1416
            R+   R + Q V               GP+LE IVSR        +  IR+V LS +L N
Sbjct: 1467 RRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVIVSRMRYISSQVENKIRIVALSTSLAN 1526

Query: 1415 YEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAG 1236
             +D+  ++    S GLF F    RP PL     GV +     R Q M    Y  ++  A 
Sbjct: 1527 AKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAR 1585

Query: 1235 KHQ-VLVFVHSRKETAKTARHIRD-AALANDTIGRFVKGDGASREILHSESEKVKNTDLK 1062
            K +  LV+V +RK    TA  +   +++ ++    F+     S E L    E++    L+
Sbjct: 1586 KGKPALVYVPTRKHARLTAVDLMTYSSMDSEDTPIFLL---RSAEELEPFVERINEPMLQ 1642

Query: 1061 DMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTVIIKGTQIYN 882
            + L YG    H G+S  D+ +V+ LF  G IQV V   T+ WGV L AH V++ GTQ Y+
Sbjct: 1643 ETLKYGVGYLHEGLSATDQDIVKTLFETGWIQVCVMNGTMCWGVPLSAHLVVVMGTQYYD 1702

Query: 881  PEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVS 702
              + A T+    D++QM+G A RP  DS G+ +I+       YY   + +  P+ES    
Sbjct: 1703 GRENAHTDYPVTDLLQMMGHASRPLVDSSGKCVILCHAPRKDYYKKFLYEAFPVESHLQH 1762

Query: 701  KLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERRAD 522
             L DNLNAE+V+G +QN ++A  +L +T++Y R+ +NP  Y L          L ++ ++
Sbjct: 1763 YLHDNLNAEVVVGVIQNKQDAVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLSDQLSE 1819

Query: 521  LIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELC 342
            L+ +  + L+ +  V  + +       +LG I+SYYYIS+ T+  ++  +        L 
Sbjct: 1820 LVENTISDLEASKCVTVEDEF-LLSPLNLGMIASYYYISYTTIERFSSSVTSKTKLKGLL 1878

Query: 341  RLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQARISQLKLEG 165
             + + + EF+ + +R  E+  + +L++ +    +     +P  K N LLQA  S+ ++ G
Sbjct: 1879 EILASASEFEQLPIRPGEEELIRRLINHLRFSFENPKYTDPHVKANALLQAHFSR-QMVG 1937

Query: 164  LSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMW 18
             +L SD   +  +A RLL+A+ +++   GW  LA   +++ +MV++ MW
Sbjct: 1938 GNLASDQQEVLLSATRLLQAMVDVISSNGWLSLALLTMEVSQMVTQGMW 1986


>ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Solanum tuberosum]
          Length = 2174

 Score = 1381 bits (3575), Expect = 0.0
 Identities = 698/902 (77%), Positives = 787/902 (87%), Gaps = 3/902 (0%)
 Frame = -2

Query: 2699 GIDDEDMENADEGMNLNVQDIDAYWLQRKITQAHSSAIDPQRSQQLAEEVLRILAGDGDS 2520
            GIDD++M +ADEGM LNVQDIDAYWLQRKI+QA+   IDPQ+SQ+LAEEVL+ILA +GD 
Sbjct: 257  GIDDDEMRDADEGMALNVQDIDAYWLQRKISQAYEQQIDPQQSQKLAEEVLKILA-EGDD 315

Query: 2519 RDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSEDQEERKRIEYEMSGDGVLR-A 2343
            R+VE  L+  L F+KF LIK LLRNR K+VWCTRLAR+EDQE RK+IE EM G G    A
Sbjct: 316  REVETKLLVHLQFDKFSLIKYLLRNRLKVVWCTRLARAEDQENRKKIEEEMLGLGPDHVA 375

Query: 2342 ILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXXXXXXXXXG-MENSWLKGQRQ 2166
            ILEQLHATRATAKERQKNLE+S+REEAR+L                   ++N WL GQRQ
Sbjct: 376  ILEQLHATRATAKERQKNLEKSIREEARRLKDESGVDGDGERKALVDRDLDNGWLMGQRQ 435

Query: 2165 LLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVHXXXXXXXPLSDGEDLIKITDM 1986
             LDL+S++F QGGLLMANKKCELP GS+R+ +KGYEEVH       PL  GE+L+KI+ +
Sbjct: 436  FLDLDSLAFQQGGLLMANKKCELPVGSYRNHKKGYEEVHVPALKPRPLDPGEELVKISSI 495

Query: 1985 PEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGP 1806
            PEW +PAF GM  LNRVQS+VYETALF+ EN+LLCAPTGAGKTNVA+LTILQQI LNR  
Sbjct: 496  PEWARPAFSGMTQLNRVQSKVYETALFSPENILLCAPTGAGKTNVAMLTILQQIALNRNE 555

Query: 1805 D-GELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQII 1629
            D G  + +++KIVYVAPMKALVAEVVGNLSKRL  Y +TVKEL+GDQ+L+RQQIEETQII
Sbjct: 556  DDGTFNHNNYKIVYVAPMKALVAEVVGNLSKRLEHYGVTVKELSGDQTLTRQQIEETQII 615

Query: 1628 VTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMI 1449
            VTTPEKWDIITRKSGDRTYTQLVK           DNRGPVLESI++RT+RQIETT+E I
Sbjct: 616  VTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIIARTIRQIETTKEHI 675

Query: 1448 RLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMND 1269
            RLVGLSATLPNYEDVA+FLRVD  KGLF+FDNSYRP PL+QQYIG+TV+KPLQRFQLMND
Sbjct: 676  RLVGLSATLPNYEDVAVFLRVDLKKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMND 735

Query: 1268 ICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSES 1089
            +CYEKV+S AGKHQVL+FVHSRKET+KTAR IRD ALANDT+G+F+K D  +RE+L S++
Sbjct: 736  VCYEKVISIAGKHQVLIFVHSRKETSKTARAIRDTALANDTLGKFLKEDSLTRELLQSQT 795

Query: 1088 EKVKNTDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTV 909
            E VK+ DLKD+LPYGFAIHHAGM R DR LVEDLF DGH+QVLVSTATLAWGVNLPAHTV
Sbjct: 796  ELVKSNDLKDLLPYGFAIHHAGMVRTDRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTV 855

Query: 908  IIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQ 729
            IIKGTQIYNPEKGAWTELSPLD+MQMLGRAGRPQYD+YGEGII+TGHSELQYYLSLMNQQ
Sbjct: 856  IIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIILTGHSELQYYLSLMNQQ 915

Query: 728  LPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKD 549
            LPIESQF+SKLAD LNAEIVLGTV NA+EAC WL YTYLY+RM+RNP LYGL ADAL+ D
Sbjct: 916  LPIESQFISKLADQLNAEIVLGTVLNAKEACKWLLYTYLYVRMVRNPTLYGLPADALKTD 975

Query: 548  NTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLK 369
              LEERRADL+HSAA +LD+NNLVKYDRKSGYFQVTDLGRI+SYYYI+HGT+STYNEHLK
Sbjct: 976  YALEERRADLVHSAAILLDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLK 1035

Query: 368  PTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKESLEEPSAKINVLLQAR 189
            PTMGDIELCRLFSLSEEFKYVTVR++EKMELAKLLDRVPIP+KESLEEPSAKINVLLQA 
Sbjct: 1036 PTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQAY 1095

Query: 188  ISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQ 9
            IS+LKLEGLSL SDMV+ITQ+A RL+RALFEIVLKRGWAQLAE+ALK CKM+SKRMWSVQ
Sbjct: 1096 ISRLKLEGLSLSSDMVYITQSAARLMRALFEIVLKRGWAQLAEKALKWCKMISKRMWSVQ 1155

Query: 8    TP 3
            TP
Sbjct: 1156 TP 1157



 Score =  312 bits (799), Expect = 7e-82
 Identities = 203/649 (31%), Positives = 339/649 (52%), Gaps = 4/649 (0%)
 Frame = -2

Query: 1952 KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKI 1773
            K+ N VQ++V+     + +N+L+ APTG+GKT  A   IL+     +GPD     S+ + 
Sbjct: 1354 KHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNH--QKGPD-----STIRA 1406

Query: 1772 VYVAPMKALVAEVVGNLSKRLADY-NITVKELTGDQSLSRQQIEETQIIVTTPEKWDIIT 1596
            VY+AP++AL  E   +   +  D+  + V ELTG+ +   + +E+ Q+I++TPEKWD ++
Sbjct: 1407 VYIAPLEALAKERFNDWKTKFGDHLGMRVVELTGETASDLKLLEKGQLIISTPEKWDALS 1466

Query: 1595 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPN 1416
            R+   R + Q V               GP+LE IVSR        +  IR+V LS +L N
Sbjct: 1467 RRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVIVSRMRYISSQVENKIRIVALSTSLAN 1526

Query: 1415 YEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAG 1236
             +D+  ++    S GLF F    RP PL     GV +     R Q M    Y  ++  A 
Sbjct: 1527 AKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAR 1585

Query: 1235 KHQ-VLVFVHSRKETAKTARHIRD-AALANDTIGRFVKGDGASREILHSESEKVKNTDLK 1062
            K +  LV+V +RK    TA  +   +++ ++    F+     S E L    E++    L+
Sbjct: 1586 KGKPALVYVPTRKHARLTAVDLMTYSSMDSEDTPIFLL---RSAEELEPFVERINEPMLQ 1642

Query: 1061 DMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTVIIKGTQIYN 882
            + L YG    H G+S  D+ +V+ LF  G IQV V   T+ WGV L AH V++ GTQ Y+
Sbjct: 1643 ETLKYGVGYLHEGLSATDQDIVKTLFETGWIQVCVMNGTMCWGVPLSAHLVVVMGTQYYD 1702

Query: 881  PEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVS 702
              + A T+    D++QM+G A RP  DS G+ +I+       YY   + +  P+ES    
Sbjct: 1703 GRENAHTDYPVTDLLQMMGHASRPLVDSSGKCVILCHAPRKDYYKKFLYEAFPVESHLQH 1762

Query: 701  KLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERRAD 522
             L DNLNAE+V+G +QN ++A  +L +T++Y R+ +NP  Y L          L ++ ++
Sbjct: 1763 YLHDNLNAEVVVGVIQNKQDAVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLSDQLSE 1819

Query: 521  LIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELC 342
            L+ +  + L+ +  V  + +       +LG I+SYYYIS+ T+  ++  +        L 
Sbjct: 1820 LVENTISDLEASKCVTIEDEF-LLSPLNLGMIASYYYISYTTIERFSSSVTSKTKLKGLL 1878

Query: 341  RLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQARISQLKLEG 165
             + + + EF+ + +R  E+  + +L++ +    +     +P  K N LLQA  S+ ++ G
Sbjct: 1879 EILASASEFEQLPIRPGEEELIRRLINHLRFSFENPKYTDPHVKANALLQAHFSR-QMVG 1937

Query: 164  LSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMW 18
             +L SD   +  +A RLL+A+ +++   GW  LA   +++ +MV++ MW
Sbjct: 1938 GNLASDQQEVLLSATRLLQAMVDVISSNGWLSLALLTMEVSQMVTQGMW 1986


>ref|XP_002463258.1| hypothetical protein SORBIDRAFT_02g040700 [Sorghum bicolor]
            gi|241926635|gb|EER99779.1| hypothetical protein
            SORBIDRAFT_02g040700 [Sorghum bicolor]
          Length = 2182

 Score = 1381 bits (3575), Expect = 0.0
 Identities = 699/902 (77%), Positives = 790/902 (87%), Gaps = 2/902 (0%)
 Frame = -2

Query: 2702 GGIDDEDMENADEGMNLNVQDIDAYWLQRKITQAHSSA-IDPQRSQQLAEEVLRILAGDG 2526
            G +DD+DM+NA++G+ +NVQDIDAYWLQRKI+QA+    ID Q+SQ+LAE++L+I+A +G
Sbjct: 269  GELDDDDMQNANQGLAVNVQDIDAYWLQRKISQAYGDGDIDAQQSQKLAEDILKIIA-EG 327

Query: 2525 DSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSEDQEERKRIEYEMSGDGVLR 2346
            D RDVEN LV LLD+EKFDLIKLLLRNR KIVWCTRLAR+EDQE+RK+IE EM+ D  L 
Sbjct: 328  DDRDVENRLVMLLDYEKFDLIKLLLRNRLKIVWCTRLARAEDQEQRKKIEEEMASDPSLA 387

Query: 2345 AILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXXXXXXXXXG-MENSWLKGQR 2169
             ILEQLHATRA+AKERQKNLE+S+R+EA++L                   ME+ WLKGQR
Sbjct: 388  PILEQLHATRASAKERQKNLEKSIRDEAKRLLNNDAGADGARDRRAAERDMESGWLKGQR 447

Query: 2168 QLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVHXXXXXXXPLSDGEDLIKITD 1989
            QLLDLES+SFHQGGL MANKKCELP GSFR+  KGYEEVH       P    E ++KI+D
Sbjct: 448  QLLDLESLSFHQGGLFMANKKCELPTGSFRTPHKGYEEVHVPALKAKPYETSEKIVKISD 507

Query: 1988 MPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRG 1809
            MPE+ + AF GM  LNRVQSRVY+TALF  +N+LLCAPTGAGKTNVAVLTILQQIGL+  
Sbjct: 508  MPEFARSAFDGMTQLNRVQSRVYDTALFKPDNILLCAPTGAGKTNVAVLTILQQIGLHMQ 567

Query: 1808 PDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQII 1629
             DG+ D + +KIVYVAPMKALVAEVVGNLS RLA YN+TV+EL+GDQ+L++QQI+ETQII
Sbjct: 568  DDGQFDNTKYKIVYVAPMKALVAEVVGNLSNRLAGYNVTVRELSGDQNLTKQQIDETQII 627

Query: 1628 VTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMI 1449
            VTTPEKWDI+TRKSGDRTYTQ+VK           DNRGPVLESIV+RTVRQIETT+E I
Sbjct: 628  VTTPEKWDIVTRKSGDRTYTQMVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHI 687

Query: 1448 RLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMND 1269
            RLVGLSATLPNYEDVALFLRV K + LFYFDNSYRPCPL+QQYIG+TVRKPLQR QLMN+
Sbjct: 688  RLVGLSATLPNYEDVALFLRVRK-ESLFYFDNSYRPCPLAQQYIGITVRKPLQRMQLMNE 746

Query: 1268 ICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSES 1089
            ICYEKV++ AGKHQVL+FVHSRKETAKTA+ IRD ALANDT+ RF+K + AS+EIL + +
Sbjct: 747  ICYEKVMAAAGKHQVLIFVHSRKETAKTAKAIRDTALANDTVSRFLKNESASQEILGTHA 806

Query: 1088 EKVKNTDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTV 909
            E VKN DLKD+LPYGFAIHHAGM+RVDR LVE+LF D HIQVLVSTATLAWGVNLPAHTV
Sbjct: 807  ELVKNNDLKDLLPYGFAIHHAGMARVDRELVEELFADKHIQVLVSTATLAWGVNLPAHTV 866

Query: 908  IIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQ 729
            IIKGTQIYNPEKGAWTELSPLD+MQMLGRAGRPQYD++GEGII+TGHSELQ+YLSLMNQQ
Sbjct: 867  IIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTHGEGIILTGHSELQFYLSLMNQQ 926

Query: 728  LPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKD 549
            LPIESQF+SKLAD LNAEIVLGT+QNAREAC+WLGYTYLYIRMLRNP LYGL AD LE D
Sbjct: 927  LPIESQFISKLADQLNAEIVLGTIQNAREACSWLGYTYLYIRMLRNPTLYGLPADILESD 986

Query: 548  NTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLK 369
             TL+ERRADLIHSAA +LDRNNL+KYDRK+GYFQVTDLGRI+SYYYISHGT+STYNE+LK
Sbjct: 987  KTLDERRADLIHSAANLLDRNNLIKYDRKTGYFQVTDLGRIASYYYISHGTISTYNEYLK 1046

Query: 368  PTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKESLEEPSAKINVLLQAR 189
            PTMGDIELCRLFSLSEEFKYV VR +EKMELAKLLDRVPIPVKESLEEPSAKINVLLQA 
Sbjct: 1047 PTMGDIELCRLFSLSEEFKYVGVRLDEKMELAKLLDRVPIPVKESLEEPSAKINVLLQAY 1106

Query: 188  ISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQ 9
            IS+LKLEGLSL SDMV+I Q+AGRLLRALFEIVLKRGWAQLAE+AL LCKMV K+MWSVQ
Sbjct: 1107 ISRLKLEGLSLSSDMVYIRQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVDKQMWSVQ 1166

Query: 8    TP 3
            TP
Sbjct: 1167 TP 1168



 Score =  301 bits (770), Expect = 2e-78
 Identities = 200/651 (30%), Positives = 338/651 (51%), Gaps = 2/651 (0%)
 Frame = -2

Query: 1964 FGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLS 1785
            +   K+ N +Q++V+     + +++L+ APTG+GKT  A   IL+     R   GE   S
Sbjct: 1361 YSAFKHFNPIQTQVFTVLYNSDDSVLVAAPTGSGKTICAEFAILRNH--QRAVSGE---S 1415

Query: 1784 SFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQIIVTTPEKWD 1605
            + ++VY+AP++ L  E   +  ++  ++   V ELTG+ +   + +++ +II++TPEKWD
Sbjct: 1416 NMRVVYIAPIEGLAKERYRDWERKFGEF-AKVVELTGETAADLKLLDKGEIIISTPEKWD 1474

Query: 1604 IITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSAT 1425
             ++R+   R + Q V             ++G VLE IVSR  R        IR+V LSA+
Sbjct: 1475 ALSRRWKQRKHIQQVSLFIVDELHLLGSDKGHVLEVIVSRMRRISSHIGSNIRIVALSAS 1534

Query: 1424 LPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLS 1245
            L N +D+  ++    S GLF F  + RP PL     GV +     R Q M    Y  +  
Sbjct: 1535 LANAKDLGEWIGAT-SHGLFNFPPAVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAITQ 1593

Query: 1244 CAGKHQ-VLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTD 1068
             A   +  LV+V +RK    TA  +   +        F+ G   S + + + +  V+   
Sbjct: 1594 HAKNSKPALVYVPTRKHARLTALDLCAYSSVEGAGTPFLLG---SEDEMDTFTRGVEEET 1650

Query: 1067 LKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTVIIKGTQI 888
            LK+ L  G    H G+S +D+ LV  LF  G IQV V+++T+ WG  LPAH V++ GTQ 
Sbjct: 1651 LKNTLKCGVGYLHEGLSELDQELVTQLFLGGRIQVCVASSTMCWGRPLPAHLVVVMGTQY 1710

Query: 887  YNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQF 708
            Y+  + A T+    D++QM+G A RP  D+ G+ +I+      +YY   + +  P+ES  
Sbjct: 1711 YDGRENAHTDYPITDLLQMMGHASRPLQDNSGKCVILCHAPRKEYYKKFLFEAFPVESNL 1770

Query: 707  VSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERR 528
               L D++NAE+V+G V+N ++A  +L +T++Y R+ +NP  Y L          L +  
Sbjct: 1771 HHFLHDHMNAEVVVGVVENKQDAVDYLTWTFMYRRLTKNPNFYNLQG---VSHRHLSDHL 1827

Query: 527  ADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIE 348
            ++L+ +    L+ +  V  + +  Y +  +LG I+SYYYIS+ T+  ++  L        
Sbjct: 1828 SELVETVLNDLESSKCVAIE-EDMYLKPLNLGLIASYYYISYTTIERFSSMLTQKTKVKG 1886

Query: 347  LCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPV-KESLEEPSAKINVLLQARISQLKL 171
            L  + + + E+  +  R  E+  + +L+      + K    +P  K N LLQA  S+  +
Sbjct: 1887 LLEILASASEYAELPGRPGEEEFIERLVRHQRFSIEKPKYGDPHVKANALLQAHFSRHTV 1946

Query: 170  EGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMW 18
             G +L +D   I  +A RLL+A+ +++   GW  LA  A++L +MV++ MW
Sbjct: 1947 VG-NLAADQREILLSAHRLLQAMVDVISSNGWLSLALSAMELSQMVTQGMW 1996



 Score = 85.5 bits (210), Expect = 1e-13
 Identities = 62/141 (43%), Positives = 71/141 (50%), Gaps = 17/141 (12%)
 Frame = -3

Query: 3118 PKKDVKRRRGG---QDESVLSITDDRVYQPRTKETRAAYEALLSTI---------XXXXX 2975
            P++D KRRR     Q+ SVLS+TDD VY+P+TKETRAAYEALLS I              
Sbjct: 93   PRRDAKRRRRAASTQEVSVLSLTDDAVYKPQTKETRAAYEALLSLIQQQLGGQPLDVLAG 152

Query: 2974 XXXXXXXXXXXXXXXXPXXXXXXXXXXXXXKPTEFAQLVSIGKLITDYHE--GGDGVNT- 2804
                            P                 F QLVSIGKLITD+H+   GD     
Sbjct: 153  AADEVLATLKNDKVKNPDKKKDIEQLLNPISSQLFDQLVSIGKLITDFHDAAAGDAAGVP 212

Query: 2803 SASG--EALDDDIGVAVEFEE 2747
            SA G    LDDD+GVAVEFEE
Sbjct: 213  SADGTDTTLDDDVGVAVEFEE 233


>ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            isoform X1 [Citrus sinensis]
            gi|568853532|ref|XP_006480406.1| PREDICTED: U5 small
            nuclear ribonucleoprotein 200 kDa helicase-like isoform
            X2 [Citrus sinensis]
          Length = 2179

 Score = 1376 bits (3561), Expect = 0.0
 Identities = 707/903 (78%), Positives = 785/903 (86%), Gaps = 3/903 (0%)
 Frame = -2

Query: 2702 GGIDDEDME-NADEGMNLNVQDIDAYWLQRKITQAHSSAIDPQRSQQLAEEVLRILAGDG 2526
            GGIDD+D   +A+EGM+LNVQDIDAYWLQRKI+QA    IDPQ+ Q+LAEEVL+ILA +G
Sbjct: 264  GGIDDDDESGDANEGMSLNVQDIDAYWLQRKISQAFDQQIDPQQCQKLAEEVLKILA-EG 322

Query: 2525 DSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSEDQEERKRIEYEMSGDGV-L 2349
            D R+VEN L+  L F+KF LIK LLRNR K+VWCTRLAR++DQEERK+IE EM G G  L
Sbjct: 323  DDREVENKLLYHLQFDKFSLIKFLLRNRLKVVWCTRLARAQDQEERKKIEEEMMGLGPDL 382

Query: 2348 RAILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXXXXXXXXXG-MENSWLKGQ 2172
             AIL+QLHATRATAKERQKNLE+S+REEAR+L                    +  WL GQ
Sbjct: 383  AAILDQLHATRATAKERQKNLEKSIREEARRLKDESASDGGRDRRGLVDRDADGGWL-GQ 441

Query: 2171 RQLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVHXXXXXXXPLSDGEDLIKIT 1992
            RQLLDL++++F QGGL MAN+KC+LP GS R T KGYEE+H       PL   E LIKI+
Sbjct: 442  RQLLDLDTLAFQQGGLFMANRKCDLPEGSQRFTNKGYEEIHVPAMKHKPLDPNEKLIKIS 501

Query: 1991 DMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNR 1812
            +MPEW QPAF GM  LNRVQSRVY++AL +A+N+LLCAPTGAGKTNVAVLTILQQ+ LNR
Sbjct: 502  EMPEWAQPAFKGMTQLNRVQSRVYKSALSSADNILLCAPTGAGKTNVAVLTILQQLALNR 561

Query: 1811 GPDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQI 1632
              DG  + S++KIVYVAPMKALVAEVVGNLS RL  Y++ V+EL+GDQ+L+RQQIEETQI
Sbjct: 562  NDDGSFNHSNYKIVYVAPMKALVAEVVGNLSNRLQMYDVKVRELSGDQTLTRQQIEETQI 621

Query: 1631 IVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEM 1452
            IVTTPEKWDIITRKSGDRTYTQLVK           DNRGPVLESIV+RTVRQIETT+E 
Sbjct: 622  IVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEH 681

Query: 1451 IRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMN 1272
            IRLVGLSATLPNYEDVALFLRV+  KGLFYFDNSYRP PLSQQYIG+ V+KPLQRFQLMN
Sbjct: 682  IRLVGLSATLPNYEDVALFLRVNLEKGLFYFDNSYRPVPLSQQYIGIQVKKPLQRFQLMN 741

Query: 1271 DICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSE 1092
            D+CYEKV++ AGKHQVL+FVHSRKETAKTAR IRD AL NDT+GRF+K D  SREIL S 
Sbjct: 742  DLCYEKVVAVAGKHQVLIFVHSRKETAKTARAIRDTALENDTLGRFLKEDSVSREILQSH 801

Query: 1091 SEKVKNTDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHT 912
            ++ VK+ DLKD+LPYGFAIHHAGM+R DR LVEDLFGDGH+QVLVSTATLAWGVNLPAHT
Sbjct: 802  TDMVKSNDLKDLLPYGFAIHHAGMTRGDRQLVEDLFGDGHVQVLVSTATLAWGVNLPAHT 861

Query: 911  VIIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQ 732
            VIIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSEL+YYLSLMNQ
Sbjct: 862  VIIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQ 921

Query: 731  QLPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEK 552
            QLPIESQFVSKLAD LNAEIVLGTVQNA+EAC W+GYTYLYIRMLRNP LYGL+ + L++
Sbjct: 922  QLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKE 981

Query: 551  DNTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHL 372
            D TL ERRADL+H+AATILDRNNLVKYDRKSGYFQVTDLGRI+SYYYISHGT+STYNEHL
Sbjct: 982  DITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHL 1041

Query: 371  KPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKESLEEPSAKINVLLQA 192
            KPTMGDIELCRLFSLSEEFKYVTVR++EKMELAKLLDRVPIPVKESLEEPSAKINVLLQA
Sbjct: 1042 KPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSAKINVLLQA 1101

Query: 191  RISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSV 12
             ISQLKLEGLSL SDMVFITQ+AGRLLRALFEIVLKRGWAQLAE+AL L KMV+KRMWSV
Sbjct: 1102 YISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLSKMVTKRMWSV 1161

Query: 11   QTP 3
            QTP
Sbjct: 1162 QTP 1164



 Score =  292 bits (747), Expect = 7e-76
 Identities = 192/653 (29%), Positives = 328/653 (50%), Gaps = 4/653 (0%)
 Frame = -2

Query: 1964 FGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLS 1785
            + G K+ N +Q++V+     T +N+L+ APTG+GKT      I  +  + R      +  
Sbjct: 1357 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKT------ICSEFAILRNHQKASETG 1410

Query: 1784 SFKIVYVAPMKALVAEVVGNLSKRLAD-YNITVKELTGDQSLSRQQIEETQIIVTTPEKW 1608
              + VY+AP++AL  E   +   +      + V ELTG+ ++  + +E+ QII++TPEKW
Sbjct: 1411 VMRAVYIAPLEALAKERYRDWEIKFGQGLGMRVVELTGETAMDLKLLEKGQIIISTPEKW 1470

Query: 1607 DIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSA 1428
            D ++R+   R Y Q V               GPVLE IVSR        +  IR+V LS 
Sbjct: 1471 DALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQVENKIRIVALST 1530

Query: 1427 TLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVL 1248
            +L N +D+  ++    S GLF F    RP PL     GV +     R Q M    +  ++
Sbjct: 1531 SLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTFTAIV 1589

Query: 1247 SCAGKHQ-VLVFVHSRKETAKTARHIRD-AALANDTIGRFVKGDGASREILHSESEKVKN 1074
              A   +  LVFV SRK    TA  +   +++  D    F+       E +    + ++ 
Sbjct: 1590 QHAKNEKPALVFVPSRKYVRLTAVDLMTYSSMDGDQKSAFLLWPA---EEVEPFIDNIQE 1646

Query: 1073 TDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTVIIKGT 894
              LK  L +G    H G+++ D+ +V  LF  G I+V V ++++ WGV L AH V++ GT
Sbjct: 1647 EMLKATLRHGVGYLHEGLNKTDQEVVSALFEAGKIKVCVMSSSMCWGVPLTAHLVVVMGT 1706

Query: 893  QIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIES 714
            Q Y+ ++ A T+    D++QM+G A RP  D+ G+ +I+      +YY   +    P+ES
Sbjct: 1707 QYYDGQENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYDAFPVES 1766

Query: 713  QFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEE 534
                 L DN NAEIV G ++N ++A  +L +T++Y R+ +NP  Y L          L +
Sbjct: 1767 HLHHFLHDNFNAEIVAGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLSD 1823

Query: 533  RRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGD 354
              ++L+ +  + L+ +  +  +        ++ G I+SYYYIS+ T+  ++  L P    
Sbjct: 1824 HLSELVENTISDLEASKCIIIEEDMD-LSPSNHGMIASYYYISYTTIERFSSSLTPKTRM 1882

Query: 353  IELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQARISQL 177
              L  + + + E+  + +R  E+  + +L+       +     +P  K N LLQA  S+ 
Sbjct: 1883 KGLLEVLASASEYAQLPIRPGEEEVVRRLIHHQRFSFENPKFTDPHVKANALLQAHFSRQ 1942

Query: 176  KLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMW 18
            ++ G +L  D   +  +A RLL+A+ +++   GW  LA  A+++ +MV++ +W
Sbjct: 1943 QVGG-NLKLDQEEVLLSASRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGIW 1994


>ref|XP_006428572.1| hypothetical protein CICLE_v100108901mg, partial [Citrus clementina]
            gi|557530629|gb|ESR41812.1| hypothetical protein
            CICLE_v100108901mg, partial [Citrus clementina]
          Length = 1791

 Score = 1376 bits (3561), Expect = 0.0
 Identities = 707/903 (78%), Positives = 785/903 (86%), Gaps = 3/903 (0%)
 Frame = -2

Query: 2702 GGIDDEDME-NADEGMNLNVQDIDAYWLQRKITQAHSSAIDPQRSQQLAEEVLRILAGDG 2526
            GGIDD+D   +A+EGM+LNVQDIDAYWLQRKI+QA    IDPQ+ Q+LAEEVL+ILA +G
Sbjct: 264  GGIDDDDESGDANEGMSLNVQDIDAYWLQRKISQAFDQQIDPQQCQKLAEEVLKILA-EG 322

Query: 2525 DSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSEDQEERKRIEYEMSGDGV-L 2349
            D R+VEN L+  L F+KF LIK LLRNR K+VWCTRLAR++DQEERK+IE EM G G  L
Sbjct: 323  DDREVENKLLYHLQFDKFSLIKFLLRNRLKVVWCTRLARAQDQEERKKIEEEMMGLGPDL 382

Query: 2348 RAILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXXXXXXXXXG-MENSWLKGQ 2172
             AIL+QLHATRATAKERQKNLE+S+REEAR+L                    +  WL GQ
Sbjct: 383  AAILDQLHATRATAKERQKNLEKSIREEARRLKDESASDGGRDRRGLVDRDADGGWL-GQ 441

Query: 2171 RQLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVHXXXXXXXPLSDGEDLIKIT 1992
            RQLLDL++++F QGGL MAN+KC+LP GS R T KGYEE+H       PL   E LIKI+
Sbjct: 442  RQLLDLDTLAFQQGGLFMANRKCDLPEGSQRFTNKGYEEIHVPAMKHKPLDPNEKLIKIS 501

Query: 1991 DMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNR 1812
            +MPEW QPAF GM  LNRVQSRVY++AL +A+N+LLCAPTGAGKTNVAVLTILQQ+ LNR
Sbjct: 502  EMPEWAQPAFKGMTQLNRVQSRVYKSALSSADNILLCAPTGAGKTNVAVLTILQQLALNR 561

Query: 1811 GPDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQI 1632
              DG  + S++KIVYVAPMKALVAEVVGNLS RL  Y++ V+EL+GDQ+L+RQQIEETQI
Sbjct: 562  NDDGSFNHSNYKIVYVAPMKALVAEVVGNLSNRLQMYDVKVRELSGDQTLTRQQIEETQI 621

Query: 1631 IVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEM 1452
            IVTTPEKWDIITRKSGDRTYTQLVK           DNRGPVLESIV+RTVRQIETT+E 
Sbjct: 622  IVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEH 681

Query: 1451 IRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMN 1272
            IRLVGLSATLPNYEDVALFLRV+  KGLFYFDNSYRP PLSQQYIG+ V+KPLQRFQLMN
Sbjct: 682  IRLVGLSATLPNYEDVALFLRVNLEKGLFYFDNSYRPVPLSQQYIGIQVKKPLQRFQLMN 741

Query: 1271 DICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSE 1092
            D+CYEKV++ AGKHQVL+FVHSRKETAKTAR IRD AL NDT+GRF+K D  SREIL S 
Sbjct: 742  DLCYEKVVAVAGKHQVLIFVHSRKETAKTARAIRDTALENDTLGRFLKEDSVSREILQSH 801

Query: 1091 SEKVKNTDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHT 912
            ++ VK+ DLKD+LPYGFAIHHAGM+R DR LVEDLFGDGH+QVLVSTATLAWGVNLPAHT
Sbjct: 802  TDMVKSNDLKDLLPYGFAIHHAGMTRGDRQLVEDLFGDGHVQVLVSTATLAWGVNLPAHT 861

Query: 911  VIIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQ 732
            VIIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSEL+YYLSLMNQ
Sbjct: 862  VIIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQ 921

Query: 731  QLPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEK 552
            QLPIESQFVSKLAD LNAEIVLGTVQNA+EAC W+GYTYLYIRMLRNP LYGL+ + L++
Sbjct: 922  QLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKE 981

Query: 551  DNTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHL 372
            D TL ERRADL+H+AATILDRNNLVKYDRKSGYFQVTDLGRI+SYYYISHGT+STYNEHL
Sbjct: 982  DITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHL 1041

Query: 371  KPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKESLEEPSAKINVLLQA 192
            KPTMGDIELCRLFSLSEEFKYVTVR++EKMELAKLLDRVPIPVKESLEEPSAKINVLLQA
Sbjct: 1042 KPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSAKINVLLQA 1101

Query: 191  RISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSV 12
             ISQLKLEGLSL SDMVFITQ+AGRLLRALFEIVLKRGWAQLAE+AL L KMV+KRMWSV
Sbjct: 1102 YISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLSKMVTKRMWSV 1161

Query: 11   QTP 3
            QTP
Sbjct: 1162 QTP 1164



 Score =  217 bits (553), Expect = 2e-53
 Identities = 141/445 (31%), Positives = 224/445 (50%), Gaps = 3/445 (0%)
 Frame = -2

Query: 1964 FGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLS 1785
            + G K+ N +Q++V+     T +N+L+ APTG+GKT      I  +  + R      +  
Sbjct: 1357 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKT------ICSEFAILRNHQKASETG 1410

Query: 1784 SFKIVYVAPMKALVAEVVGNLSKRLAD-YNITVKELTGDQSLSRQQIEETQIIVTTPEKW 1608
              + VY+AP++AL  E   +   +      + V ELTG+ ++  + +E+ QII++TPEKW
Sbjct: 1411 VMRAVYIAPLEALAKERYRDWEIKFGQGLGMRVVELTGETAMDLKLLEKGQIIISTPEKW 1470

Query: 1607 DIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSA 1428
            D ++R+   R Y Q V               GPVLE IVSR        +  IR+V LS 
Sbjct: 1471 DALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQVENKIRIVALST 1530

Query: 1427 TLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVL 1248
            +L N +D+  ++    S GLF F    RP PL     GV +     R Q M    +  ++
Sbjct: 1531 SLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTFTAIV 1589

Query: 1247 SCAGKHQ-VLVFVHSRKETAKTARHIRD-AALANDTIGRFVKGDGASREILHSESEKVKN 1074
              A   +  LVFV SRK    TA  +   +++  D    F+       E +    + ++ 
Sbjct: 1590 QHAKNEKPALVFVPSRKYVRLTAVDLMTYSSMDGDQKSAFLLWPA---EEVEPFIDNIQE 1646

Query: 1073 TDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTVIIKGT 894
              LK  L +G    H G+++ D+ +V  LF  G I+V V ++++ WGV L AH V++ GT
Sbjct: 1647 EMLKATLRHGVGYLHEGLNKTDQEVVSALFEAGKIKVCVMSSSMCWGVPLTAHLVVVMGT 1706

Query: 893  QIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIES 714
            Q Y+ ++ A T+    D++QM+G A RP  D+ G+ +I+      +YY   +    P+ES
Sbjct: 1707 QYYDGQENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYDAFPVES 1766

Query: 713  QFVSKLADNLNAEIVLGTVQNAREA 639
                 L DN NAEIV G ++N ++A
Sbjct: 1767 HLHHFLHDNFNAEIVAGVIENKQDA 1791


>tpg|DAA63842.1| TPA: hypothetical protein ZEAMMB73_506422 [Zea mays]
          Length = 2203

 Score = 1374 bits (3556), Expect = 0.0
 Identities = 703/924 (76%), Positives = 791/924 (85%), Gaps = 24/924 (2%)
 Frame = -2

Query: 2702 GGIDDEDMENADEGMNLNVQDIDAYWLQRKITQAHSSA-IDPQRSQQLAEEVLRILAGDG 2526
            G +DD+DM+NA++G+ +NVQDIDAYWLQRKI+QA+    ID Q+SQ+LAE++L+I+A +G
Sbjct: 269  GELDDDDMQNANQGLTVNVQDIDAYWLQRKISQAYGDGDIDAQQSQKLAEDILKIIA-EG 327

Query: 2525 DSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSEDQEERKRIEYEMSGDGVLR 2346
            D RDVEN LV LLD+EKFDLIKLLLRNR KIVWCTRLAR+EDQE+RK IE EM+ D  L 
Sbjct: 328  DDRDVENRLVMLLDYEKFDLIKLLLRNRLKIVWCTRLARAEDQEQRKNIEEEMASDPSLA 387

Query: 2345 AILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXXXXXXXXXG----MENSWLK 2178
             ILEQLHATRA+AKERQKNLE+S+R+EA++L                      ME+ WLK
Sbjct: 388  PILEQLHATRASAKERQKNLEKSIRDEAKRLLNNDAAAAGADGARDHRAAEWDMESGWLK 447

Query: 2177 GQRQLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVHXXXXXXXPLSDGEDLIK 1998
            GQRQLLDLES+SFHQGGL MANKKCELP GSFR+  KGYEEVH       P   GE ++K
Sbjct: 448  GQRQLLDLESLSFHQGGLFMANKKCELPTGSFRTPHKGYEEVHVPALKAKPYETGEKIVK 507

Query: 1997 ITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGL 1818
            I+DMPEW + AF GM  LNRVQSRVY+TALF  +N+LLCAPTGAGKTNVAVLTILQQIGL
Sbjct: 508  ISDMPEWARSAFDGMTQLNRVQSRVYDTALFKPDNILLCAPTGAGKTNVAVLTILQQIGL 567

Query: 1817 NRGPDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEET 1638
            +   DGE D + +KIVYVAPMKALVAEVVGNLSKRLA YN+TV+EL+GDQ+L++QQI+ET
Sbjct: 568  HM-QDGEFDNTKYKIVYVAPMKALVAEVVGNLSKRLAGYNVTVRELSGDQNLTKQQIDET 626

Query: 1637 QIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQ 1458
            QIIVTTPEKWDI+TRKSGDRTYTQ+VK           DNRGPVLESIV+RTVRQIETT+
Sbjct: 627  QIIVTTPEKWDIVTRKSGDRTYTQMVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTK 686

Query: 1457 EMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQL 1278
            E IRLVGLSATLPNYEDVALFLRV K + LFYFDNSYRPCPL+QQYIG+TVRKPLQR QL
Sbjct: 687  ENIRLVGLSATLPNYEDVALFLRVRK-ESLFYFDNSYRPCPLAQQYIGITVRKPLQRMQL 745

Query: 1277 MNDICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILH 1098
            MN+ICYEKV++ AGKHQVL+FVHSRKETAKTA+ IRD ALANDT+ RF+K + AS+EIL 
Sbjct: 746  MNEICYEKVMAAAGKHQVLIFVHSRKETAKTAKAIRDTALANDTVSRFLKNESASQEILG 805

Query: 1097 SESEKVKNTDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPA 918
            + +E VKN DLKD+LPYGFAIHHAGM+RVDR LVE+LF D HIQVLVSTATLAWGVNLPA
Sbjct: 806  THAELVKNNDLKDLLPYGFAIHHAGMARVDRELVEELFADKHIQVLVSTATLAWGVNLPA 865

Query: 917  HTVIIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLM 738
            HTVIIKGTQIYNPEKGAWTELSPLD+MQMLGRAGRPQYD++GEGII+TGHSELQ+YLSLM
Sbjct: 866  HTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTHGEGIILTGHSELQFYLSLM 925

Query: 737  NQQLPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADAL 558
            NQQLPIESQF+SKLAD LNAEIVLGT+QNAREAC+WLGYTYLYIRMLRNP LYGL AD L
Sbjct: 926  NQQLPIESQFISKLADQLNAEIVLGTIQNAREACSWLGYTYLYIRMLRNPTLYGLPADIL 985

Query: 557  EKDNTLEERRADL-------------------IHSAATILDRNNLVKYDRKSGYFQVTDL 435
            E D TL+ERRADL                   IHSAA +LDRNNL+KYDRK+GYFQVTDL
Sbjct: 986  ESDKTLDERRADLVSIKGGPGAAVEPTVCNRKIHSAANLLDRNNLIKYDRKTGYFQVTDL 1045

Query: 434  GRISSYYYISHGTMSTYNEHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRV 255
            GRI+SYYYISHGT+STYNE+LKPTMGDIELCRLFSLSEEFKYV VR +EKMELAKLLDRV
Sbjct: 1046 GRIASYYYISHGTISTYNEYLKPTMGDIELCRLFSLSEEFKYVGVRLDEKMELAKLLDRV 1105

Query: 254  PIPVKESLEEPSAKINVLLQARISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGW 75
            PIPVKESLEEPSAKINVLLQA IS+LKLEGLSL SDMV+I Q+AGRLLRALFEIVLKRGW
Sbjct: 1106 PIPVKESLEEPSAKINVLLQAYISRLKLEGLSLSSDMVYIRQSAGRLLRALFEIVLKRGW 1165

Query: 74   AQLAERALKLCKMVSKRMWSVQTP 3
            AQLAE+AL LCKMV K+MWSVQTP
Sbjct: 1166 AQLAEKALNLCKMVDKQMWSVQTP 1189



 Score =  300 bits (769), Expect = 2e-78
 Identities = 199/651 (30%), Positives = 337/651 (51%), Gaps = 2/651 (0%)
 Frame = -2

Query: 1964 FGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLS 1785
            +   K+ N +Q++V+     + +++L+ APTG+GKT  A   IL+     +   GE   S
Sbjct: 1382 YSAFKHFNPIQTQVFTVLYNSDDSVLVAAPTGSGKTICAEFAILRNH--QKALSGE---S 1436

Query: 1784 SFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQIIVTTPEKWD 1605
            + ++VY+AP++AL  E   +  ++  ++   V ELTG+ +   + +++ +II++TPEKWD
Sbjct: 1437 NMRVVYIAPIEALAKERYRDWERKFGEF-AKVVELTGETAADLKLLDKGEIIISTPEKWD 1495

Query: 1604 IITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSAT 1425
             ++R+   R + Q V             ++G VLE IVSR  R        IR+V LSA+
Sbjct: 1496 ALSRRWKQRKHIQQVSLFIVDELHLLGSDKGHVLEVIVSRMRRISSHIGSNIRIVALSAS 1555

Query: 1424 LPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLS 1245
            L N +D+  ++    S GLF F  + RP PL     GV +     R Q M    Y  +  
Sbjct: 1556 LANAKDLGEWIGAT-SHGLFNFPPAVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAITQ 1614

Query: 1244 CAGKHQ-VLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTD 1068
             A  ++  LV+V +RK    TA  +   +        F+ G G   +     +  V+   
Sbjct: 1615 HAKNNKPALVYVPTRKHARLTALDLCAYSSVEGAGTPFLLGSGDEMDTF---TRGVEEET 1671

Query: 1067 LKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTVIIKGTQI 888
            LK+ L  G    H G+S +D+ LV  LF  G IQV V+++T+ WG  LPAH V++ GTQ 
Sbjct: 1672 LKNTLKCGVGYLHEGLSELDQELVTQLFLGGRIQVCVASSTMCWGRPLPAHLVVVMGTQY 1731

Query: 887  YNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQF 708
            Y+  + A T+    D++QM+G A RP  D+ G+ +I+      +YY   + +  P+ES  
Sbjct: 1732 YDGRENAHTDYPITDLLQMMGHASRPLQDNSGKCVILCHAPRKEYYKKFLFEAFPVESNL 1791

Query: 707  VSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERR 528
               L D++NAE+V+G V+N ++A  +L +T++Y R+ +NP  Y L          L +  
Sbjct: 1792 HHFLHDHMNAEVVVGVVENKQDAVDYLTWTFMYRRLAKNPNFYNLQG---VSHRHLSDHL 1848

Query: 527  ADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIE 348
            ++L+ +    L+ +  V  + +  Y +  +LG I+SYYYIS+ T+  ++  L        
Sbjct: 1849 SELVETILNDLESSKCVAIE-EDMYLKPLNLGLIASYYYISYTTIERFSSMLTQKTKVKG 1907

Query: 347  LCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPV-KESLEEPSAKINVLLQARISQLKL 171
            L  + + + E+  +  R  E+  + +L+      + K    +P  K N LLQA  S+  +
Sbjct: 1908 LLEILASASEYAELPGRPGEEEFIERLVRHQRFSIEKPKYGDPHVKANALLQAHFSRHTV 1967

Query: 170  EGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMW 18
             G +L +D   I  +A RLL+A+ +++   GW  LA   ++L +MV++ MW
Sbjct: 1968 VG-NLAADQREILLSAHRLLQAMVDVISSNGWLSLALSTMELSQMVTQGMW 2017



 Score = 87.4 bits (215), Expect = 4e-14
 Identities = 60/145 (41%), Positives = 71/145 (48%), Gaps = 17/145 (11%)
 Frame = -3

Query: 3130 SLERPKKDVKRRR---GGQDESVLSITDDRVYQPRTKETRAAYEALLSTI---------X 2987
            S + P++D KRRR     Q+ SVLS+TDD VY+P+TKETRAAYEALLS I          
Sbjct: 89   SADLPRRDAKRRRRAASAQEVSVLSLTDDAVYKPQTKETRAAYEALLSLIQQQLGGQPLD 148

Query: 2986 XXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXKPTEFAQLVSIGKLITDYHEGGDG-- 2813
                                P                 F QLVSIGKLITD+H+   G  
Sbjct: 149  VLAGAADEVLATLKNDKVKNPDKKKDIEQLLNPISSQLFDQLVSIGKLITDFHDAAAGDA 208

Query: 2812 ---VNTSASGEALDDDIGVAVEFEE 2747
                +  A    LDDD+GVAVEFEE
Sbjct: 209  SGAPSADAVDTTLDDDVGVAVEFEE 233


>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Cucumis sativus]
          Length = 2175

 Score = 1373 bits (3553), Expect = 0.0
 Identities = 703/902 (77%), Positives = 775/902 (85%), Gaps = 2/902 (0%)
 Frame = -2

Query: 2702 GGIDDEDMENADEGMNLNVQDIDAYWLQRKITQAHSSAIDPQRSQQLAEEVLRILAGDGD 2523
            GGIDD+D++  D GMNLNVQDIDAYWLQRKI+QA+   IDPQ+ Q+LAEEVL+ILA +GD
Sbjct: 257  GGIDDDDLQENDGGMNLNVQDIDAYWLQRKISQAYEQQIDPQQCQKLAEEVLKILA-EGD 315

Query: 2522 SRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSEDQEERKRIEYEMSGDGV-LR 2346
             R++E  L+  L FEKF L+K LLRNR K+VWCTRLARSEDQEERK+IE EM   G  L 
Sbjct: 316  DREIETKLLVHLQFEKFSLVKFLLRNRLKVVWCTRLARSEDQEERKKIEEEMMHLGPDLA 375

Query: 2345 AILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXXXXXXXXXG-MENSWLKGQR 2169
            AILEQLHATRATAKERQKNLE+S+REEAR+L                   M+N  L GQ 
Sbjct: 376  AILEQLHATRATAKERQKNLEKSIREEARRLKDESGGDAERGRRDPVERDMDNGGLTGQS 435

Query: 2168 QLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVHXXXXXXXPLSDGEDLIKITD 1989
            QLLDL+SI+F QG LLMAN KC LP GS+R   KGYEE+H       P    E  +KI  
Sbjct: 436  QLLDLDSIAFQQGSLLMANNKCVLPDGSYRHLGKGYEEIHVPKLNAKPFGSDEKFVKIAS 495

Query: 1988 MPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRG 1809
            MP+W QPAF GM  LNRVQS+VYETALF A+N+LLCAPTGAGKTNVAVLTILQQI L+  
Sbjct: 496  MPDWAQPAFKGMTQLNRVQSKVYETALFKADNVLLCAPTGAGKTNVAVLTILQQIALHTN 555

Query: 1808 PDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQII 1629
            PDG  + + +KIVYVAPMKALVAEVVGNLS RL DY + V+EL+GDQ+L+RQQI+ETQII
Sbjct: 556  PDGSYNHNDYKIVYVAPMKALVAEVVGNLSNRLQDYGVKVRELSGDQTLTRQQIDETQII 615

Query: 1628 VTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMI 1449
            VTTPEKWDIITRKSGDRTYTQLVK           DNRGPVLESIV+RTVRQIETT+E I
Sbjct: 616  VTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHI 675

Query: 1448 RLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMND 1269
            RLVGLSATLPNYEDVALFLRVD  KGLF+FDNSYRP  L QQYIG+TV+KPLQRFQLMND
Sbjct: 676  RLVGLSATLPNYEDVALFLRVDPKKGLFHFDNSYRPVALYQQYIGITVKKPLQRFQLMND 735

Query: 1268 ICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSES 1089
            +CYEKV+S AGKHQVL+FVHSRKET+KTAR IRDAALANDT+ RF+K D ASREILH+ +
Sbjct: 736  LCYEKVMSFAGKHQVLIFVHSRKETSKTARAIRDAALANDTLSRFLKEDSASREILHTHT 795

Query: 1088 EKVKNTDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTV 909
            + VK+ +LKD+LPYGFAIHHAGM+RVDR LVEDLF DGHIQVLVSTATLAWGVNLPAH V
Sbjct: 796  DLVKSNELKDLLPYGFAIHHAGMTRVDRQLVEDLFADGHIQVLVSTATLAWGVNLPAHCV 855

Query: 908  IIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQ 729
            IIKGTQIYNPEKGAWTELSPLD+MQMLGRAGRPQ+DS G GIIITGHSELQYYLSLMNQQ
Sbjct: 856  IIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSEGTGIIITGHSELQYYLSLMNQQ 915

Query: 728  LPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKD 549
            LPIESQFVSKLAD LNAEIVLGTVQNAREA  WLGYTYLY+RMLRNP LYGL+ADA  +D
Sbjct: 916  LPIESQFVSKLADQLNAEIVLGTVQNAREASNWLGYTYLYVRMLRNPTLYGLAADAPTRD 975

Query: 548  NTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLK 369
             TLEERRADLIHSAATILD+NNLVKYDRKSGYFQVTDLGRI+SYYYI+HGT+STYNEHLK
Sbjct: 976  ITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLK 1035

Query: 368  PTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKESLEEPSAKINVLLQAR 189
            P MGDIELCRLFSLSEEFKYVTVR++EKMELAKLL+RVPIP+KESLEEPSAKINVLLQA 
Sbjct: 1036 PMMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLERVPIPIKESLEEPSAKINVLLQAY 1095

Query: 188  ISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQ 9
            ISQLKLEGLSL SDMVFITQ+AGRL+RALFEIVLKRGWAQLAE+AL LCKMVSKRMWSVQ
Sbjct: 1096 ISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQ 1155

Query: 8    TP 3
            TP
Sbjct: 1156 TP 1157



 Score =  298 bits (763), Expect = 1e-77
 Identities = 201/648 (31%), Positives = 330/648 (50%), Gaps = 3/648 (0%)
 Frame = -2

Query: 1952 KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKI 1773
            K+ N VQ++V+     T +N+L+ APTG+GKT  A   IL+     +G D  L     + 
Sbjct: 1354 KHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNY--QKGQDNVL-----RA 1406

Query: 1772 VYVAPMKALVAEVVGNLSKRLAD-YNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIIT 1596
            VY+AP+++L  E   +  K+      I V ELTG+ +   + +E  QII++TPEKWD ++
Sbjct: 1407 VYIAPIESLAKERYRDWDKKFGKGLGIRVVELTGETATDLKLLERGQIIISTPEKWDALS 1466

Query: 1595 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPN 1416
            R+   R Y Q V               GPVLE IVSR        +  IR+V LS +L N
Sbjct: 1467 RRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQIENKIRIVALSTSLAN 1526

Query: 1415 YEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAG 1236
             +D+  ++    S GLF F    RP PL     GV +     R Q M    Y  ++  A 
Sbjct: 1527 AKDIGDWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAK 1585

Query: 1235 KHQ-VLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTDLKD 1059
              +  +VFV +RK    TA  I   + A++  G  +     S E +    +K+ +  LK 
Sbjct: 1586 NGKPAIVFVPTRKHVRLTAVDIMTYSSADN--GEKLPFLLRSLEDIEPFVDKINDEMLKA 1643

Query: 1058 MLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNP 879
            +L +G    H G+S +D+ +V  LF  G IQV V ++++ WGV L AH V++ GTQ Y+ 
Sbjct: 1644 ILRHGVGYLHEGLSSLDQEVVTQLFEAGWIQVCVISSSMCWGVPLSAHLVVVMGTQYYDG 1703

Query: 878  EKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSK 699
             + A T+    D+MQM+G A RP  D+ G+ +I+      +YY   + +  P+ES     
Sbjct: 1704 RENAHTDYPVTDLMQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHF 1763

Query: 698  LADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERRADL 519
            L DN+NAEIV G ++N ++A  ++ +T +Y R+ +NP  Y L          L +  ++L
Sbjct: 1764 LHDNINAEIVAGIIENKQDAVDYITWTLMYRRLTQNPNYYNLQG---VSHRHLSDHLSEL 1820

Query: 518  IHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCR 339
            +    + L+ +  +  +        ++LG I+SYYYIS+ T+  ++  L        L  
Sbjct: 1821 VEHTLSDLEASKCISIEDDMD-LSPSNLGMIASYYYISYTTIERFSSSLTAKTKMKGLLE 1879

Query: 338  LFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQARISQLKLEGL 162
            + + + E+  + +R  E+  + +L++      +     +P  K N LLQA  S+  + G 
Sbjct: 1880 ILASASEYALLPIRPGEEELIRRLINHQRFSFENPKCTDPHVKANALLQAYFSRQSVGG- 1938

Query: 161  SLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMW 18
            +L  D   +  +A RLL+A+ +++   GW  LA  A+++ +MV++ +W
Sbjct: 1939 NLALDQREVVISASRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGLW 1986


>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
            200 kDa helicase-like [Cucumis sativus]
          Length = 2175

 Score = 1370 bits (3547), Expect = 0.0
 Identities = 702/902 (77%), Positives = 774/902 (85%), Gaps = 2/902 (0%)
 Frame = -2

Query: 2702 GGIDDEDMENADEGMNLNVQDIDAYWLQRKITQAHSSAIDPQRSQQLAEEVLRILAGDGD 2523
            GGIDD+D++  D GMNLNVQDIDAYWLQRKI+QA+   IDPQ+ Q+LAEEVL+ILA +GD
Sbjct: 257  GGIDDDDLQENDGGMNLNVQDIDAYWLQRKISQAYEQQIDPQQCQKLAEEVLKILA-EGD 315

Query: 2522 SRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSEDQEERKRIEYEMSGDGV-LR 2346
             R++E  L+  L FEKF L+K LLRNR K+VWCTRLARSEDQEER +IE EM   G  L 
Sbjct: 316  DREIETKLLVHLQFEKFSLVKFLLRNRLKVVWCTRLARSEDQEERXKIEEEMMHLGPDLA 375

Query: 2345 AILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXXXXXXXXXG-MENSWLKGQR 2169
            AILEQLHATRATAKERQKNLE+S+REEAR+L                   M+N  L GQ 
Sbjct: 376  AILEQLHATRATAKERQKNLEKSIREEARRLKDESGGDAERGRRDPVERDMDNGGLTGQS 435

Query: 2168 QLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVHXXXXXXXPLSDGEDLIKITD 1989
            QLLDL+SI+F QG LLMAN KC LP GS+R   KGYEE+H       P    E  +KI  
Sbjct: 436  QLLDLDSIAFQQGSLLMANNKCVLPDGSYRHLGKGYEEIHVPKLNAKPFGSDEKFVKIAS 495

Query: 1988 MPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRG 1809
            MP+W QPAF GM  LNRVQS+VYETALF A+N+LLCAPTGAGKTNVAVLTILQQI L+  
Sbjct: 496  MPDWAQPAFKGMTQLNRVQSKVYETALFKADNVLLCAPTGAGKTNVAVLTILQQIALHTN 555

Query: 1808 PDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQII 1629
            PDG  + + +KIVYVAPMKALVAEVVGNLS RL DY + V+EL+GDQ+L+RQQI+ETQII
Sbjct: 556  PDGSYNHNDYKIVYVAPMKALVAEVVGNLSNRLQDYGVKVRELSGDQTLTRQQIDETQII 615

Query: 1628 VTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMI 1449
            VTTPEKWDIITRKSGDRTYTQLVK           DNRGPVLESIV+RTVRQIETT+E I
Sbjct: 616  VTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHI 675

Query: 1448 RLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMND 1269
            RLVGLSATLPNYEDVALFLRVD  KGLF+FDNSYRP  L QQYIG+TV+KPLQRFQLMND
Sbjct: 676  RLVGLSATLPNYEDVALFLRVDPKKGLFHFDNSYRPVALYQQYIGITVKKPLQRFQLMND 735

Query: 1268 ICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSES 1089
            +CYEKV+S AGKHQVL+FVHSRKET+KTAR IRDAALANDT+ RF+K D ASREILH+ +
Sbjct: 736  LCYEKVMSFAGKHQVLIFVHSRKETSKTARAIRDAALANDTLSRFLKEDSASREILHTHT 795

Query: 1088 EKVKNTDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTV 909
            + VK+ +LKD+LPYGFAIHHAGM+RVDR LVEDLF DGHIQVLVSTATLAWGVNLPAH V
Sbjct: 796  DLVKSNELKDLLPYGFAIHHAGMTRVDRQLVEDLFADGHIQVLVSTATLAWGVNLPAHCV 855

Query: 908  IIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQ 729
            IIKGTQIYNPEKGAWTELSPLD+MQMLGRAGRPQ+DS G GIIITGHSELQYYLSLMNQQ
Sbjct: 856  IIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSEGTGIIITGHSELQYYLSLMNQQ 915

Query: 728  LPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKD 549
            LPIESQFVSKLAD LNAEIVLGTVQNAREA  WLGYTYLY+RMLRNP LYGL+ADA  +D
Sbjct: 916  LPIESQFVSKLADQLNAEIVLGTVQNAREASNWLGYTYLYVRMLRNPTLYGLAADAPTRD 975

Query: 548  NTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLK 369
             TLEERRADLIHSAATILD+NNLVKYDRKSGYFQVTDLGRI+SYYYI+HGT+STYNEHLK
Sbjct: 976  ITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLK 1035

Query: 368  PTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKESLEEPSAKINVLLQAR 189
            P MGDIELCRLFSLSEEFKYVTVR++EKMELAKLL+RVPIP+KESLEEPSAKINVLLQA 
Sbjct: 1036 PMMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLERVPIPIKESLEEPSAKINVLLQAY 1095

Query: 188  ISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQ 9
            ISQLKLEGLSL SDMVFITQ+AGRL+RALFEIVLKRGWAQLAE+AL LCKMVSKRMWSVQ
Sbjct: 1096 ISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQ 1155

Query: 8    TP 3
            TP
Sbjct: 1156 TP 1157



 Score =  298 bits (763), Expect = 1e-77
 Identities = 201/648 (31%), Positives = 330/648 (50%), Gaps = 3/648 (0%)
 Frame = -2

Query: 1952 KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKI 1773
            K+ N VQ++V+     T +N+L+ APTG+GKT  A   IL+     +G D  L     + 
Sbjct: 1354 KHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNY--QKGQDNVL-----RA 1406

Query: 1772 VYVAPMKALVAEVVGNLSKRLAD-YNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIIT 1596
            VY+AP+++L  E   +  K+      I V ELTG+ +   + +E  QII++TPEKWD ++
Sbjct: 1407 VYIAPIESLAKERYRDWDKKFGKGLGIRVVELTGETATDLKLLERGQIIISTPEKWDALS 1466

Query: 1595 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPN 1416
            R+   R Y Q V               GPVLE IVSR        +  IR+V LS +L N
Sbjct: 1467 RRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQIENKIRIVALSTSLAN 1526

Query: 1415 YEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAG 1236
             +D+  ++    S GLF F    RP PL     GV +     R Q M    Y  ++  A 
Sbjct: 1527 AKDIGDWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAK 1585

Query: 1235 KHQ-VLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTDLKD 1059
              +  +VFV +RK    TA  I   + A++  G  +     S E +    +K+ +  LK 
Sbjct: 1586 NGKPAIVFVPTRKHVRLTAVDIMTYSSADN--GEKLPFLLRSLEDIEPFVDKINDEMLKA 1643

Query: 1058 MLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNP 879
            +L +G    H G+S +D+ +V  LF  G IQV V ++++ WGV L AH V++ GTQ Y+ 
Sbjct: 1644 ILRHGVGYLHEGLSSLDQEVVTQLFEAGWIQVCVISSSMCWGVPLSAHLVVVMGTQYYDG 1703

Query: 878  EKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSK 699
             + A T+    D+MQM+G A RP  D+ G+ +I+      +YY   + +  P+ES     
Sbjct: 1704 RENAHTDYPVTDLMQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHF 1763

Query: 698  LADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERRADL 519
            L DN+NAEIV G ++N ++A  ++ +T +Y R+ +NP  Y L          L +  ++L
Sbjct: 1764 LHDNINAEIVAGIIENKQDAVDYITWTLMYRRLTQNPNYYNLQG---VSHRHLSDHLSEL 1820

Query: 518  IHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCR 339
            +    + L+ +  +  +        ++LG I+SYYYIS+ T+  ++  L        L  
Sbjct: 1821 VEHTLSDLEASKCISIEDDMD-LSPSNLGMIASYYYISYTTIERFSSSLTAKTKMKGLLE 1879

Query: 338  LFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQARISQLKLEGL 162
            + + + E+  + +R  E+  + +L++      +     +P  K N LLQA  S+  + G 
Sbjct: 1880 ILASASEYALLPIRPGEEELIRRLINHQRFSFENPKCTDPHVKANALLQAYFSRQSVGG- 1938

Query: 161  SLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMW 18
            +L  D   +  +A RLL+A+ +++   GW  LA  A+++ +MV++ +W
Sbjct: 1939 NLALDQREVVISASRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGLW 1986


>ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
            truncatula] gi|355485040|gb|AES66243.1| U5 small nuclear
            ribonucleoprotein 200 kDa helicase [Medicago truncatula]
          Length = 2223

 Score = 1370 bits (3546), Expect = 0.0
 Identities = 706/947 (74%), Positives = 789/947 (83%), Gaps = 47/947 (4%)
 Frame = -2

Query: 2702 GGIDDEDMENADEGMNLNVQDIDAYWLQRKITQAHSSAIDPQRSQQLAEEVLRILAGDGD 2523
            GGIDDEDME+A+EGMNLNVQDIDAYWLQRKI+ A+   IDP + Q+LA EVL+ILA D D
Sbjct: 264  GGIDDEDMEDANEGMNLNVQDIDAYWLQRKISHAYEQLIDPDQCQKLAGEVLKILA-DPD 322

Query: 2522 SRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSEDQEERKRIEYEMSGDGVLRA 2343
             R+VEN L+  L+++KF LIK LLRNR KI+WCTRLAR++DQEER+ IE EM    +L+ 
Sbjct: 323  DREVENKLLFHLEYDKFSLIKFLLRNRLKILWCTRLARAQDQEERETIEEEMKESDLLQP 382

Query: 2342 ILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXXXXXXXXXGM---------EN 2190
            ILEQLHATRA+AKERQKNLE+S+REEAR+L                  +         E+
Sbjct: 383  ILEQLHATRASAKERQKNLEKSIREEARRLKDDTVGDGDKERDRDRDRIRRGAGDRDGES 442

Query: 2189 SWLKGQRQLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVHXXXXXXXPLSDGE 2010
             WLKGQRQ+LDL++++F QGGL MA KKC+LP GS+R   KGYEE+H       PL   E
Sbjct: 443  GWLKGQRQMLDLDNLTFEQGGLFMAKKKCDLPDGSYRHLEKGYEEIHVPALKAKPLDPNE 502

Query: 2009 DLIKITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQ 1830
             L+KI+ MP+W QPAF GM  LNRVQS+VYETALF  +NLLLCAPTGAGKTNVAVLTILQ
Sbjct: 503  KLLKISAMPDWAQPAFKGMTQLNRVQSKVYETALFKPDNLLLCAPTGAGKTNVAVLTILQ 562

Query: 1829 QIGLNRGPD-GELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQ 1653
            QI  +R  D G +D S++KIVYVAPMKALVAEVVGNLS RL DYN+TV+EL+GDQSL+RQ
Sbjct: 563  QIARHRNTDDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLQDYNVTVRELSGDQSLTRQ 622

Query: 1652 QIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQ 1473
            QIEETQIIVTTPEKWDIITRKSGDRTYTQLVK           DNRGPVLESIV+RTVRQ
Sbjct: 623  QIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLVIIDEIHLLHDNRGPVLESIVARTVRQ 682

Query: 1472 IETTQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPL 1293
            IET+++ IRLVGLSATLPNYEDVALFLRVD +KGLFYFDNSYRP PLSQQYIG+T++KPL
Sbjct: 683  IETSKDYIRLVGLSATLPNYEDVALFLRVDLNKGLFYFDNSYRPVPLSQQYIGITIKKPL 742

Query: 1292 QRFQLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGAS 1113
            QRFQLMNDICY KVL  AGKHQVL+FVHSRKETAKTAR IRDAALA+DT+GRF+K D AS
Sbjct: 743  QRFQLMNDICYRKVLDVAGKHQVLIFVHSRKETAKTARAIRDAALADDTLGRFLKEDSAS 802

Query: 1112 REILHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWG 933
            REILH+ ++ VK++DLKD+LPYGFAIHHAGM+R DR LVEDLF DGH QVLVSTATLAWG
Sbjct: 803  REILHTHTDLVKSSDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHAQVLVSTATLAWG 862

Query: 932  VNLPAHTVIIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQY 753
            VNLPAHTVIIKGTQIYNPEKGAWTELSPLD+MQMLGRAGRPQYDSYGEGII+TGHSELQY
Sbjct: 863  VNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIILTGHSELQY 922

Query: 752  YLSLMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGL 573
            YLSLMNQQLPIESQF+SKLAD LNAEIVLGTVQNA+EAC W+GYTYLY+RMLRNP LYGL
Sbjct: 923  YLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAKEACHWIGYTYLYVRMLRNPSLYGL 982

Query: 572  SADALEKDNTLEERRADL---------------IHSAATILDRNNLVKYDRKSGYFQVTD 438
            + D L +D TLEERRADL               IH+AATILDRNNLVKYDRKSGYFQVTD
Sbjct: 983  APDVLSRDITLEERRADLFIELLEKGTKSLWTIIHTAATILDRNNLVKYDRKSGYFQVTD 1042

Query: 437  LGRISSYYYISHGTMSTYNEHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDR 258
            LGRI+SYYYI+HGT+STYNEHLKPTMGDIELCRLFSLSEEFKYVTVR++EKMELAKLLDR
Sbjct: 1043 LGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDR 1102

Query: 257  VPIPVKESLEEPSAKINVLLQARISQLKLEGLSLMSDMVFIT------------------ 132
            VPIP+KESLEEPSAKINVLLQA ISQLKLEGLS+ SDMVFIT                  
Sbjct: 1103 VPIPIKESLEEPSAKINVLLQAYISQLKLEGLSMTSDMVFITQFIRSGVPLILLFADSCI 1162

Query: 131  ----QNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQTP 3
                Q+AGRLLRALFEIVLKRGWAQLAE+AL LCKMV+KRMWSVQTP
Sbjct: 1163 MFLFQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVTKRMWSVQTP 1209



 Score =  297 bits (760), Expect = 2e-77
 Identities = 200/648 (30%), Positives = 329/648 (50%), Gaps = 3/648 (0%)
 Frame = -2

Query: 1952 KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKI 1773
            K+ N VQ++V+     + +N+L+ APTG+GKT  A   IL+     + PD     S  ++
Sbjct: 1406 KHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNH--QKLPD-----SVMRV 1458

Query: 1772 VYVAPMKALVAEVVGNLSKRLAD-YNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIIT 1596
            VY+AP++AL  E   +  K+      + V ELTG+ +   + +E+ Q+I++TPEKWD ++
Sbjct: 1459 VYIAPVEALAKERYRDWEKKFGGGLKLKVVELTGETATDLKLLEKGQVIISTPEKWDALS 1518

Query: 1595 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPN 1416
            R+   R + Q V               GPVLE IVSR        +  IR+V LS +L N
Sbjct: 1519 RRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYISSQLENKIRIVALSTSLAN 1578

Query: 1415 YEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCA- 1239
             +D+  ++    S GLF F    RP PL     GV +     R Q M    Y  +   A 
Sbjct: 1579 AKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTSIAQHAK 1637

Query: 1238 GKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTDLKD 1059
             K   +VFV +RK    TA  +   + A+     F+     S E L     K+ +  LK 
Sbjct: 1638 NKKPAIVFVPTRKHVRLTAVDLITYSGADSGEKPFLL---RSLEELEPFINKISDEMLKV 1694

Query: 1058 MLPYGFAIHHAGMSRVDRTLVEDLFGDGHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNP 879
             L  G    H G++ +D  +V  LF  G IQV V ++++ WGV L AH V++ GTQ Y+ 
Sbjct: 1695 TLREGVGYLHEGLNSLDHDIVAQLFEAGWIQVCVLSSSMCWGVTLSAHLVVVMGTQYYDG 1754

Query: 878  EKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSK 699
             + A T+    D++QM+G A RP  D+ G+ +I+      +YY   + +  P+ES     
Sbjct: 1755 RENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHF 1814

Query: 698  LADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERRADL 519
            L DNLNAEIV G ++N ++A  +L +T++Y R+ +NP  Y L          L +  +++
Sbjct: 1815 LHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLSDHLSEM 1871

Query: 518  IHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCR 339
            + +  + L+ +  V  +         +LG I+SYYYIS+ T+  ++  L        L  
Sbjct: 1872 VENTLSDLEASKCVSIEDDMD-LSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLE 1930

Query: 338  LFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQARISQLKLEGL 162
            + S + E+ ++ +R  E+  + +L++      +   + +P  K N LLQA  S+  + G 
Sbjct: 1931 VLSSASEYAHLPIRPGEEEVVRRLINHQRFSFENPKVTDPHVKANALLQAHFSRQSVGG- 1989

Query: 161  SLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMW 18
            +L  D   +  +A RLL+A+ +++   GW  +A  A+++ +MV++ MW
Sbjct: 1990 NLSLDQREVLLSANRLLQAMVDVISSNGWLSMALLAMEVSQMVTQGMW 2037