BLASTX nr result

ID: Ephedra27_contig00010999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00010999
         (503 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                              60   3e-07
gb|ADW94528.1| putative truncated TIR-NBS-LRR protein [Pinus mon...    60   4e-07

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 14/161 (8%)
 Frame = +3

Query: 63  YLFIDNALEGSEIERLLPLESISKLSLEVRILVTTRDSS-KIPLVLGFEDKKYRLGGNPS 239
           +++IDNAL   E+ +LLP E +SK   +VR+L+T RD + +    L    K+YR+    S
Sbjct: 407 FIYIDNALGERELGQLLP-EDLSKAK-KVRLLITARDLNVRKSCPLKTAPKEYRMKAISS 464

Query: 240 AKEMLCHYAGENPKSE-FANMK------ELDEVLDMCGGIPLFIKLAGKKLLKQVDKAKI 398
            +      A    K E F +M+      +++ ++  CGGIPL +KL  + L    DK ++
Sbjct: 465 ME------ATNLLKMEMFGHMETILYSYQVNHIIKKCGGIPLMLKLVARALRFAKDKEEV 518

Query: 399 ------CRQMKSAALGVDNNRILDFVYNQLPPDFQQAFLDI 503
                   ++K    G D      F Y++LP D +  FLDI
Sbjct: 519 DQVLDELEKLKGEDFGRDKIESYLFAYDKLPEDCKDPFLDI 559


>gb|ADW94528.1| putative truncated TIR-NBS-LRR protein [Pinus monticola]
          Length = 815

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
 Frame = +3

Query: 57  PLYLFIDNALEGSEIERLLPLESISKLSLEVR--ILVTTRDSSKIPLVLGFEDKKYRLGG 230
           P+ L +D+     ++  LLP+     L+L     IL+T+RD + +      E   Y++ G
Sbjct: 308 PVLLVLDDVDHHDQVHALLPVTDKGILTLRPSSLILITSRDKNVLTRSGVQETSIYKMTG 367

Query: 231 --NPSAKEMLCHYAGENPKSEFANMKELDEVLDMCGGIPLFIKLAGKKLLKQVDKAKICR 404
                ++E+ C +A  +P         +D+ L+ C G+PL +K+ G  L +  DK+   +
Sbjct: 368 LSRERSRELFCSHAFCHPHPLSGFEPLVDQFLEACSGLPLSLKVFGGLLCRNTDKSYWKK 427

Query: 405 QMKS--AALGVDNNRILDFVYNQLPPDFQQAFLDI 503
           QMK     L  D  + L   Y+ L  + QQ FLDI
Sbjct: 428 QMKKLRKTLHKDIQKSLQVSYDALDKEEQQIFLDI 462


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