BLASTX nr result

ID: Ephedra27_contig00010732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00010732
         (473 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22531.1| unknown [Picea sitchensis]                              77   3e-12

>gb|ABK22531.1| unknown [Picea sitchensis]
          Length = 215

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 46/103 (44%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
 Frame = -3

Query: 471 SKPFKII-KKGRALQVKFSPGFLAGEDRRTPCCGYGAHAHTHAQEVCRIPGSNNKGVCDS 295
           +KPFKI+ KKG +LQV+ S  FL G        G G H +           S+ K +CDS
Sbjct: 123 AKPFKIVQKKGNSLQVQISTSFLNGLSNINDTSG-GCHGYK----------SSKKRLCDS 171

Query: 294 FQLMSDYTNLVKPAVRPWKPKLSTIREASSSHHAKAFRVKMFN 166
           +QLM DY  LV+PA R WKPKLSTI EA  + + K F +K+ +
Sbjct: 172 YQLMEDYAKLVRPASRAWKPKLSTITEAERA-YGKPFLLKLLS 213


Top