BLASTX nr result

ID: Ephedra27_contig00010718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra27_contig00010718
         (641 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22531.1| unknown [Picea sitchensis]                             103   3e-20
ref|XP_006854793.1| hypothetical protein AMTR_s00063p00151320 [A...    65   2e-08

>gb|ABK22531.1| unknown [Picea sitchensis]
          Length = 215

 Score =  103 bits (258), Expect = 3e-20
 Identities = 68/165 (41%), Positives = 88/165 (53%), Gaps = 13/165 (7%)
 Frame = +1

Query: 4   AIPGDEELKGGQAYFVLPRKTFEQVLTSSKVVSLIXXXXXXXXXXXXHQGS--------- 156
           AIP DE LK G  YF+LPRK+F+  LT+S V S I              G+         
Sbjct: 61  AIPSDESLKLGHTYFILPRKSFQCALTASTVASFISKMAVENHANHMQPGASRKNNIYVK 120

Query: 157 ---KPFKIM-KKGRALQVKFSPDFLAGEGRRTPCCGYGVHVHAHAQEVCRIAGGNNKGIC 324
              KPFKI+ KKG +LQV+ S  FL G        G G H +  ++          K +C
Sbjct: 121 MEAKPFKIVQKKGNSLQVQISTSFLNGLSNINDTSG-GCHGYKSSK----------KRLC 169

Query: 325 DSFQLTSDYANLVKPAVKPWKPKLSTIREASSSLHAKAFLVKMLN 459
           DS+QL  DYA LV+PA + WKPKLSTI EA  + + K FL+K+L+
Sbjct: 170 DSYQLMEDYAKLVRPASRAWKPKLSTITEAERA-YGKPFLLKLLS 213


>ref|XP_006854793.1| hypothetical protein AMTR_s00063p00151320 [Amborella trichopoda]
           gi|548858497|gb|ERN16260.1| hypothetical protein
           AMTR_s00063p00151320 [Amborella trichopoda]
          Length = 194

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 49/152 (32%), Positives = 71/152 (46%), Gaps = 3/152 (1%)
 Frame = +1

Query: 4   AIPGDEELKGGQAYFVLPRKTFEQ-VLTSSKVVSLIXXXXXXXXXXXXHQGSKPFKIMK- 177
           A+  D+ LK G+ YFV+P   F   VL+ + + SL               G +PF  +K 
Sbjct: 61  ALSLDDILKSGETYFVIPADRFSSHVLSPASLASLALCPGEPLNF-----GDRPFVYVKG 115

Query: 178 -KGRALQVKFSPDFLAGEGRRTPCCGYGVHVHAHAQEVCRIAGGNNKGICDSFQLTSDYA 354
             G+ L VK SP+F+ G             +   ++E C   GGN   +C + +L   YA
Sbjct: 116 PDGKGL-VKISPEFITG-------------IMTRSEETCE-TGGN---LCSTPELRKHYA 157

Query: 355 NLVKPAVKPWKPKLSTIREASSSLHAKAFLVK 450
            LV P  +PW PKL TIRE       +A+L +
Sbjct: 158 QLVGPRSQPWSPKLDTIRERKPRSPCRAWLTE 189


Top